Bhi11G000409 (gene) Wax gourd (B227) v1

Overview


Name	Bhi11G000409
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	serine/arginine-rich splicing factor RS40-like
Location	chr11: 12338221 .. 12346193 (-)
RNA-Seq Expression	Bhi11G000409
Synteny	Bhi11G000409

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCCCAGTACTAAAAATAAAAATAATTTCAGAAAAAGATAAAATAATCCCAAATCATATTTTTGTAAATTAAAATTAAGGATTAGGAAAAGAAAAACTCTAAAAGCACCCCAGGGGTACGCACTTGTCGCTCTCTCGCAATTCCCTTCCCTCTCCGACACCGGATACTGCGACGGCGATGCGACTGCTCTGGGGGCACGACCAGGCGACGGCGCAACCCAGCTCAGATCTGCAATAGTTCCCACCTCCGGCGTTTGATCACCTACGCAACGACACTGGGATTTGCAACGACCTAACCTTTGGGTCGCTGGATCTGCTACAGACACAGCGCGACGGCCCGATCTACGGCGGGAAGTCATTCCGGCGACGATCGAGACTCACGGTAACTAACTCACTGCCTCAGTTCTCCTTCAGTTACGATTCCGCAAGATTCAAGTCTGCAGCGACGTTTTCAGGAATTCGAACCATTAGGAATTGAAGCGCATTAAGGACCATAGTAAGTGGTTCTCATTTTAGGATTATTTGATTGTATGACACTCTTAAATTTATTTGTATACTTTAAACTGCCCCCATCCATGTCAAATTGTTATGTGAATTGTGTGCTTGGATGTGTGTGGGAAAGTACACAATTTTTTTTCTTCATTTTTATCACAGTAGAACTAGAATACGCTAATGTCAAATTATATATTTTTCTGCTAGCTGTTTGGTGGTTAATAGTTGGAATTATGGGAGTCCATTGGATGATTATGGTTAGCTGTTTAGAAGAATGATACCTCTGTAATGATGATCAATGAGATAGTTTAATTTGACCACCTAATGGTTCAATCTTTTTGCGATATTCCATTGCCCCTGGTGTTTAGCTCTAGGCTCCAGAAAGCATTTATAACACAAACTTGTGGTTGTAACTGGTTAGAATTCAAAGCTCAAGAGTTAGGACGGCAAATGTACCTGATCCCATCAAAACTCCACAGTTAAGCGTACTTGGACGAGAGTAGTACTAAGTTGGGTTCCCAAAGGTTAAAATTTGGAACTCAGGAGTTAGGACCTCAAATACACCGGATCCCATCAGAACTCCGTAGTTAAGCATACTTGGGCGAGAATAGTACTAAATTGGGTGACCACTTGGGAAGTCTTCATATTGCACCTCTTTGAAAAAAAAAAAAGGTTGGATATCGCTGGGCAAACTTCAAAAGCCTTTTGTATGAACCAAAAGGTCATATATTGTAAGGCCCCTAGTATAGAAATGGTAGGACTTTTAGGAGAATATTGGTATTGGTATTAGTAAGGGTATAAGAGTAATTAGATAGGAAGTTAGTTAGTGAATATGACTATAAATAGAAGGAGTGGGAGTGGTAGGAGGGTGTGAAGAATTTGGTGGGAATTTCCATTTGGGAATTTGGGAGAGACTAGCCCTCTCGAAAGGCTAGGGTTTATCTTGTTAGTTTGTGAGTTTATAGCATATTTCAATACATTTTCCTATATTTCTATAATTGAATTGTCCTTTAGTTTTTTCTATATTTTCTAGTACTGTTCTTGTTAGGAGGGTTCCTAACAAATTGGCATCGGAGCCGTTCTTTCTTGGAGAATTGTTTTTGCTATGGATCGTGGTCAAAGGCTAGATTCAAGGCTGTGGGAGATACAAAAAGAAAAAAAAGGCAATACAACAAAGGATCAAGGAGTCTCTGCAAAGAGATAGAGAAAGAGAAGAGAGAAGGCTGGCAGACACCCAAATAGAGAAGGAAAACCTTGTTCGGAAACTATTAAGACGAGTTCGAAGAGTGGTTGGAAGGCGACGATCGTACCTGAGAACACCTCCGAAAAAGCAAGGAAGAGTCAATCGACAAACCAAGAGGGGAGGAAAGAAAGAGGTATCACCGGGAAAGACAAAATCAGAATAGAGGCCTAGGATCAGACTTGTTGGAAGGGAACAATTTCAAAACAATAAAAGAGGAGGTAAGGATCAGGGAGTCCGAGAGAACAAATTCGATAGCACGTTCAGGGAGAAAATGAATCGAAAGGCGAAGATGAATAGAGGAAGGAGAAACCAAAAGACAAAAGGGCAACTGGAAGAGGAAGCGTCACAAATCAGCAGGGTCAGAGATGAAGTTTCTTAAAAAGCATCGATATAAGTTCCAAGAAAAGCGAGAGAAGGGATCGGGAAGGTATAACCATGAAGGAACCAACGAAGGAGATCACTACCAACGACAAGAATGGGTGCGGCGAAAGAAGAAGTCTCGAAGAACTTACCGGCGTGGTGGCGTACAGACAGAGAAACGGCGAGGTACAAACTTAACTGATTTGACTTACTCTAATAAACGAAATGGCAAGCGAAGGACGGAGAATACGTGGGCGGAGGATGGGTTGAGATGGCAAAAAGTCCGACGAACAAAATCATTTTTGATCATGCCAGGAGAAGAAAATGGGAAAGTGAGGACGGAAATAATGTATATGGCCAAAGAGGACGAGCGGCGGTGGTGGGAGAAGAAGACGTGTAAACGGAGAGACCATTCTCGGGAAGAGCAGATGCTGTGCAACAAAGGTCAAGGAGCAAGTGCACGAATGGCGGTCGTCGGAATGCGAGTGGCAGCGAAGAAGCAAGTGAGGTGGGAAGTCTTCACGAAAGATGGGTCGGGATTTGCCGAGGGAGTCGAAAGACCATGGGCAGAGAATAAGGCTCGGGAAAAGGAAAAAAAGGGTGAGATGGAAGAAGAATCTTTTACCCACGTGATTTGGAGGGTGGAACCAACGGTTGAAAAGGTGTGGGTTAATGTGCTGGTGGGAGAAGCCCAATATTTTCTGCAAGCCAGCAAGGGCTTTTGGGCCCATTTCGTTTTATGCAGGAATTTCTTTGGAAGGCGATGGGCCAGCAGTTGGAGAAATAGCATTAATTTTGGTTGGGATTGTGGGCTGGGAATCGGGAAAAAAGCCCAATTCTTGTTTGCTATAGAAGTAATTTAGGGCAGAATTTTTTATGCTGCTGAAGTGGAACAATTTTCTTCTAATTGTGGGGCTTAGCGCATGTCAAAAGCTGAGGAAGAAGGGAGCTTCTTGTCTTGGGCTGCTCTATGGGCTTAAGAAGGATGATTTTGGGCTATGGGCTGAAGTTAAGGGAACTAATTGGATCAGCTTTCCAAAGTTGAAGAAAAGAATTCCTCTTTCAAGATTGAAGAGTAGATTCCTGGGGTTATGTTTTGGAAAAAAAAAAAGTTGTCCAATTTTATGATTGTGTTTTGTAAGTCCACCTTGAGGACAAGGTGTCTTCGAAGGGCGGAGTACTGTAAGGCCCCTAGTATAGAAATAGTAGGACTTTTAGGAGAATATTGGTATTGGTATTAGTAAGGGTATAAGAGTAATTAGATAGGAAGTTAGTTAGTGAATATGGCTATAAGTAGAAGGAGTGGGAGTGGTAGGAGGGTGTGAAGAATTTGGTGCGAATTTCCATTTGGAAATTTGGGAGAGACTAGCCCTCTCGAAATGCTAGGGTTTATCTTGTTAGTTTGTGAGTTTATAGCATATTTCAATACATTTTCCTATATTTCTATAATTGAATTGTCCTTTAGTTTTTCTATATCTTTTAGTACCGTTCTTGTTAGGAGGGTTCCTAACAAATATTTATTTGCTTTTTCCCTTCTCTCTCTGTCAATCATGGGTCCTTACTTATGATATCTACTTCAGATACTAAAACTGTTATTGTTACCCAGATGGCCAACACCTGAAAGGTTTGATGATGGTTTCAGTTCTGGGCTCGGTTAACCATAAACAAGAAGTTTTTTTTTTTTTTCTTTTTCTTTTTTCTTCTATGTGGAATTAAGTAAATAGAAAAATAAAAATATTACATGGAAAAACATTTTTACTTCGTTAATATACAATTTTGGTCACTGGACATTCAAATGTCCAAATTTGTTGCTAAGTCTCAATTTAGTGTCAACTCCTAAGTCTCAATTAACCTTACCTCTATAATTTTTTAAAACACATTCACATCGTGTCTTTTCTTAAATGAAAAATATTATTATTATTTAACCAAGACGATAAAATTTTTAACTTCCAACTAACTAATAACTATAACAACTAATTGTATGATTTTTAGAAAGTAAAAGGATTATATTTGGGCATTTAAAAGTACAGAAATGAACTGAAATGAAATCCAAAGTAGAAAGATCAAAATAGAATTTTGACCTTTTTAATTTTAAAAACTAAATGATTACATATCACATGTCATATTAAAAATCTCACACTATTATAAATGTTATTTTGTAAAAAGCAATTTTTTTTAGGAAACAATTTGACACAGGCTTGGTAACTTATTTGCGGCTTAAGTGCATAGTTGTTGTGGATTCTTAATTACGTTCTTCACTTTTACAATTAGTTTCAAATAACATTCTTGTTGATGTGGTGAAATTAGGTTTCAGGAACACTGATGCCTTTGTATGTATATTTTTTTTTTTTACTTTTTTTAAATTTTTTTACAAAAGTAACAATAGCATATTTATGCTATATATATATATATATATATATATATACATAGGGGGTCTTTTTAAATATAAAAAAATATTTAAAAATATTTACCCTTTATAGCAAAAAGTTCCAAAAGTGCTACTTTTGGAATTTTTTGCTATAAAGTGTAAATATTTTTGGGATTTTTCTATTTATAAGAATTTCCCTAAATATAAAAGTACTGATATGTTTAAAAATGCAATATCTTTATGCTATTTTGTAAAATTGGACACAGGCTTATTTGCCAAAGGTAAGTGCATGGTTATTATGAATGATTTATATGTTTTCCCCTCAGGATTATATTCAAATAGTTGTCTTGTAGATGTATGGTTCCCCTTTCCAGTTAGCCTTTTTTTTTTCTCTCCCTCCTAGGGAGGTTGTATCCTTGAAACTTTTCTTTTTCTTTTTCTTTTTCCCCATATATCAATGAGAAGTTTGTTTGTTAAAATAAAATGGTTGTCGGGTTGATGCGGTGAAATTAAGTTTCATGAATTCTGATGCTTTATGTGTATTTGTATTTGTATTTGTACTTTTTTTTTGTGTGTGTGTTTTAGCATGCAAGAGATATGTTAAATGTTGTATTGTTTTTCCAATTTTTCTTCAGGTAGCATGAAGCCAATTTTTTGTGGAAACTTTGAGTTTGATGCTCGACAGCCTGATCTGGAAAGACTTTTTAGTCGATATGGAAAAGTTGATAGAGTAGATATGAAATCTGGTGAGCTTCTAGCCATTGCATGCCCGTTTATGTTTTAATTCTTTTTTTTTTTTAAATCTAAAAAACTTATAAGACGTATACTAGGAACACGGAAGTGGGCGTTTTTGTTCTGTTCTTGAATTTGTTTTGAAGTAGTGTATAATTTCCAATTTTCCATGTAGATATGTACCATACCAATTGCAAAAAATTAAAAAGAAATTATAGTTTGCAAAGTTGCTGATAATCTTATGAAAAATACTGAACTAAAAAGTTACTTTCTATCCACTAAGAAAGTGTTGGATTCAACGTTGGCAAGACAACTCAGCTGTTGGAAATTCCTCTGAAGTAGTTCTCATTGCATTTGGTGCCTTGCAATACGAATGGGCATCATCCAGTGTATGGAAATCAGAGAAGGCAACATTTGTTGAGTTTTTGGTGGAGGATTCTAAAAAAGATTTGAGAAAAGAGCATATATTTTAAATCCTAAAACTCCTTGGCCAGAATTTTCTTTGGTGCAGGATTTCCTTCGCATATTCATAATCTTCTTGGATAAGGATTGCTCTTCAGAATTGAGTTTTCCGCCTGTGACAAGCCTCCTCTTCTTGTTTCCAAGAAGATTCATACCGATCCTCAATGGCACTACCACCTTACATTTTCCTCAGATACTTTGCTTCCCATTCCTCATGACTTTTGGCTGCCTACAATTTCATACGTTGTTTCAAGGTTGAAACATTGTCAACCTTAGCTCTGAGGCTGCGGAATAATGGAGAAGGCACTTCCTATTTGTAGACCTACCATGAGACATCCTGTTTTTCATTGCTCCTTGACACCACTTAGTTCACAACACAAGGTCTGTTGCTAAATTCACTGGTAACTTAGTCTATAGATTTCACGGTGGTTGCAAATATTTCTTTCTTATGGTAAGAATTTTTTGTGGTTTGTCAAATATATGTTATAGGAAAGTATTGTTGTTTTTGGAGGATTTCTTCAGCGGGAAAATTCGCGTCTTGTATCATCGCTGGTGTCTTACAGATGCCACAATTAGTTATTCAGTTTTGGTTGTTTGATTGGTTTCAGGGTTTGCTTTTATCTACATGGACGATGAGAGAGAGGGTGAGGATGCTATCCGTGCACTTGATCGGAGAGAATTTGGCCGAAAGGGCCGCAGGCTACGTGTTGAGTGGACCAAAGTAATCTACATTGATTTGGCTCAACTTCCAACAGACTCTTTCCTTTCCTTTCCATCCCTTTGTGGAACTTTTATTTGATTTTATTTACTATAGCTTCAGCTGTAGTCTGTATCTTGATCGATCATTCTTTTTCTCTATAGCAAGAGCGTGGCATTAGAAGGCCTGGTGGAGGTGGAGGCGGATCGAGGAGATCCTCTACCAATACAAGACCTTCAAAGACTTTATTTGTTATTAACTTTGATCCATATCATACTAGGACAAGAGATTTGGAGAGGCACTTTGATCCTTATGGGAAGATATTGAATGTAAGGATTAGAAGGAATTTTGCATTTGTCCAGTATGAACTGCAGGAGGATGCCACTAGAGCATTGGAGCTTACAAACATGAGGTGAATTTTTCTTCTTTGAATTACATTTTAACTTTTAAGTGAGTAGTAAAGTCATTGAATCAATTCCCTTTTGCCCGTCAGCACTGAGACCATCTGAAGGAAGATTACGTGGATATTTTTACTTGTTAGTGGCCAGCGTGTACATGTTCAGTTATTGTTATGCCTTAATTATTATTATTATTCTGTACAGCAAATTGATGGATCGAGTGATTTCTGTGGAATATGCTGTTCGAGATGACGATGAGAAAAGAAATGGATATAGTCCAGATAGGAATCATGATAAGTCTCCCAATAGAAGACGGCGATCCCCAAGTCCCTATAGAAGAGAGCGAGGAAGTCCTGATTATGGCAATGGTATTAGCCGCAGTCCATATAGGAGACAAAGGGCTAGTCCTGCTTATGGAAGTCGCCGAAGTCCAAGTCCTTATCAGAGAGAGAGGGAGAGGGGTTCTCCTGATTATGGCCGTGGTCGTAGTCCCAATCATAGTCCTTATAGGAGGGAGAGAGAGATATCAAGTGACCATATTAGGGCCCCTAGCCATAGTCCTCCCCATCAGAGGGAAAGACCAAATGATGACCGAGTCCCCAACCGAAGTCGCAGTCCTTATGGGAGAGAGAGGGAGAGGGGCAGTCCTACTGGTGGGCGTGACACTGGCTATGGTCCTCGTGATAGAGAGAGGTCAAACCCGGACAATGGTCATGATCAGCGGCAGAGTACAGAACTTGAACCCGGTGAGAGCCCCAGTTATGGTGGCACTCAGAGCCCGAAGGATCGAGGATATAACAGGTTTGTTCTTCGAGTTTGAGATATTGTTATTACTATTAGAATTCTTGATTCTTTTTTGAAATTTTCGTCTTATGCCTGTGTTCTTGTGTTATGGTTTCGCAGCAGCCGTTCACCTCAAGCAGAGGAATGATGATCTAGAAAATCGGAAGTGATGTTGATCTCAATCCGCTTCAGACTATGTTTAGTTGTATAGTCAGTATAAGTGGTAAACACATGTATTGTAAGGATAAAGTTTGTGATTTCTTTACATTTGTGCTTTTTCAGTTTCTAGTGATTATATGGATATGCTGTTATAACCAGATTTTAGTTGGCAATCAAAATACGTAGCACTCTGATCCATATTTGACAGTCTTTGTTCTTTTTAGCTTACCTACTTTAAAAATGGTGAAACATGCTTGTTGTGGGACTTGTTTGTTTGTG

mRNA sequence

GTTCCCAGTACTAAAAATAAAAATAATTTCAGAAAAAGATAAAATAATCCCAAATCATATTTTTGTAAATTAAAATTAAGGATTAGGAAAAGAAAAACTCTAAAAGCACCCCAGGGGTACGCACTTGTCGCTCTCTCGCAATTCCCTTCCCTCTCCGACACCGGATACTGCGACGGCGATGCGACTGCTCTGGGGGCACGACCAGGCGACGGCGCAACCCAGCTCAGATCTGCAATAGTTCCCACCTCCGGCGTTTGATCACCTACGCAACGACACTGGGATTTGCAACGACCTAACCTTTGGGTCGCTGGATCTGCTACAGACACAGCGCGACGGCCCGATCTACGGCGGGAAGTCATTCCGGCGACGATCGAGACTCACGGTAACTAACTCACTGCCTCAGTTCTCCTTCAGTTACGATTCCGCAAGATTCAAGTCTGCAGCGACGTTTTCAGGAATTCGAACCATTAGGAATTGAAGCGCATTAAGGACCATAGTAGCATGAAGCCAATTTTTTGTGGAAACTTTGAGTTTGATGCTCGACAGCCTGATCTGGAAAGACTTTTTAGTCGATATGGAAAAGTTGATAGAGTAGATATGAAATCTGGGTTTGCTTTTATCTACATGGACGATGAGAGAGAGGGTGAGGATGCTATCCGTGCACTTGATCGGAGAGAATTTGGCCGAAAGGGCCGCAGGCTACGTGTTGAGTGGACCAAACAAGAGCGTGGCATTAGAAGGCCTGGTGGAGGTGGAGGCGGATCGAGGAGATCCTCTACCAATACAAGACCTTCAAAGACTTTATTTGTTATTAACTTTGATCCATATCATACTAGGACAAGAGATTTGGAGAGGCACTTTGATCCTTATGGGAAGATATTGAATGTAAGGATTAGAAGGAATTTTGCATTTGTCCAGTATGAACTGCAGGAGGATGCCACTAGAGCATTGGAGCTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCTGTGGAATATGCTGTTCGAGATGACGATGAGAAAAGAAATGGATATAGTCCAGATAGGAATCATGATAAGTCTCCCAATAGAAGACGGCGATCCCCAAGTCCCTATAGAAGAGAGCGAGGAAGTCCTGATTATGGCAATGGTATTAGCCGCAGTCCATATAGGAGACAAAGGGCTAGTCCTGCTTATGGAAGTCGCCGAAGTCCAAGTCCTTATCAGAGAGAGAGGGAGAGGGGTTCTCCTGATTATGGCCGTGGTCGTAGTCCCAATCATAGTCCTTATAGGAGGGAGAGAGAGATATCAAGTGACCATATTAGGGCCCCTAGCCATAGTCCTCCCCATCAGAGGGAAAGACCAAATGATGACCGAGTCCCCAACCGAAGTCGCAGTCCTTATGGGAGAGAGAGGGAGAGGGGCAGTCCTACTGGTGGGCGTGACACTGGCTATGGTCCTCGTGATAGAGAGAGGTCAAACCCGGACAATGGTCATGATCAGCGGCAGAGTACAGAACTTGAACCCGGTGAGAGCCCCAGTTATGGTGGCACTCAGAGCCCGAAGGATCGAGGATATAACAGCAGCCGTTCACCTCAAGCAGAGGAATGATGATCTAGAAAATCGGAAGTGATGTTGATCTCAATCCGCTTCAGACTATGTTTAGTTGTATAGTCAGTATAAGTGGTAAACACATGTATTGTAAGGATAAAGTTTGTGATTTCTTTACATTTGTGCTTTTTCAGTTTCTAGTGATTATATGGATATGCTGTTATAACCAGATTTTAGTTGGCAATCAAAATACGTAGCACTCTGATCCATATTTGACAGTCTTTGTTCTTTTTAGCTTACCTACTTTAAAAATGGTGAAACATGCTTGTTGTGGGACTTGTTTGTTTGTG

Coding sequence (CDS)

ATGAAGCCAATTTTTTGTGGAAACTTTGAGTTTGATGCTCGACAGCCTGATCTGGAAAGACTTTTTAGTCGATATGGAAAAGTTGATAGAGTAGATATGAAATCTGGGTTTGCTTTTATCTACATGGACGATGAGAGAGAGGGTGAGGATGCTATCCGTGCACTTGATCGGAGAGAATTTGGCCGAAAGGGCCGCAGGCTACGTGTTGAGTGGACCAAACAAGAGCGTGGCATTAGAAGGCCTGGTGGAGGTGGAGGCGGATCGAGGAGATCCTCTACCAATACAAGACCTTCAAAGACTTTATTTGTTATTAACTTTGATCCATATCATACTAGGACAAGAGATTTGGAGAGGCACTTTGATCCTTATGGGAAGATATTGAATGTAAGGATTAGAAGGAATTTTGCATTTGTCCAGTATGAACTGCAGGAGGATGCCACTAGAGCATTGGAGCTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCTGTGGAATATGCTGTTCGAGATGACGATGAGAAAAGAAATGGATATAGTCCAGATAGGAATCATGATAAGTCTCCCAATAGAAGACGGCGATCCCCAAGTCCCTATAGAAGAGAGCGAGGAAGTCCTGATTATGGCAATGGTATTAGCCGCAGTCCATATAGGAGACAAAGGGCTAGTCCTGCTTATGGAAGTCGCCGAAGTCCAAGTCCTTATCAGAGAGAGAGGGAGAGGGGTTCTCCTGATTATGGCCGTGGTCGTAGTCCCAATCATAGTCCTTATAGGAGGGAGAGAGAGATATCAAGTGACCATATTAGGGCCCCTAGCCATAGTCCTCCCCATCAGAGGGAAAGACCAAATGATGACCGAGTCCCCAACCGAAGTCGCAGTCCTTATGGGAGAGAGAGGGAGAGGGGCAGTCCTACTGGTGGGCGTGACACTGGCTATGGTCCTCGTGATAGAGAGAGGTCAAACCCGGACAATGGTCATGATCAGCGGCAGAGTACAGAACTTGAACCCGGTGAGAGCCCCAGTTATGGTGGCACTCAGAGCCCGAAGGATCGAGGATATAACAGCAGCCGTTCACCTCAAGCAGAGGAATGA

Protein sequence

MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRERPNDDRVPNRSRSPYGRERERGSPTGGRDTGYGPRDRERSNPDNGHDQRQSTELEPGESPSYGGTQSPKDRGYNSSRSPQAEE

Homology

[Close]

BLAST of Bhi11G000409 vs. TAIR 10
Match: AT4G25500.1 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 382.9 bits (982), Expect = 2.9e-106
Identity = 223/364 (61.26%), Postives = 268/364 (73.63%), Query Frame = 0


Query: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60
           MKP+FCGNFE+DAR+ DLERLF +YGKV+RVDMK+GFAF+YM+DER+ EDAIRALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
           GRKGRRLRVEWTK ERG  +    GGGSRRSS++ RPSKTLFVINFD  +TRTRDLE+HF
Sbjct: 61  GRKGRRLRVEWTKSERGGDK--RSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHF 120

Query: 121 DPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180
           +PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+S
Sbjct: 121 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHS 180

Query: 181 PDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISR-SPYRRQRASPAYGSRRSPSPYQRER 240
           P+R  D+SP RRRRSPSPY+RERGSPDYG G S  + YR++R SP YG RRSPSPY++ R
Sbjct: 181 PERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSR 240

Query: 241 ERGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRERPNDDRVPNRSRSPYGRER 300
            RGSP+YGR R  N SP RRER  S       S SP ++RER + +  P +  SP     
Sbjct: 241 -RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMSPNHSPFKKESPRNGVG 300

Query: 301 ERGSPTGGRDTGYGPRDRERSNPDNGHDQRQSTELEPGESPSYGGTQSPKDRGYNSSRSP 360
           E  SP          R+R RS+P+NG  +   +         Y G +SP  +   S RSP
Sbjct: 301 EVESP-------IERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKS-RSPRSP 350

Query: 361 QAEE 364
            A+E
Sbjct: 361 PADE 350

[Close]

BLAST of Bhi11G000409 vs. TAIR 10
Match: AT4G25500.4 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 382.9 bits (982), Expect = 2.9e-106
Identity = 223/364 (61.26%), Postives = 268/364 (73.63%), Query Frame = 0


Query: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60
           MKP+FCGNFE+DAR+ DLERLF +YGKV+RVDMK+GFAF+YM+DER+ EDAIRALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
           GRKGRRLRVEWTK ERG  +    GGGSRRSS++ RPSKTLFVINFD  +TRTRDLE+HF
Sbjct: 61  GRKGRRLRVEWTKSERGGDK--RSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHF 120

Query: 121 DPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180
           +PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+S
Sbjct: 121 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHS 180

Query: 181 PDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISR-SPYRRQRASPAYGSRRSPSPYQRER 240
           P+R  D+SP RRRRSPSPY+RERGSPDYG G S  + YR++R SP YG RRSPSPY++ R
Sbjct: 181 PERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSR 240

Query: 241 ERGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRERPNDDRVPNRSRSPYGRER 300
            RGSP+YGR R  N SP RRER  S       S SP ++RER + +  P +  SP     
Sbjct: 241 -RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMSPNHSPFKKESPRNGVG 300

Query: 301 ERGSPTGGRDTGYGPRDRERSNPDNGHDQRQSTELEPGESPSYGGTQSPKDRGYNSSRSP 360
           E  SP          R+R RS+P+NG  +   +         Y G +SP  +   S RSP
Sbjct: 301 EVESP-------IERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKS-RSPRSP 350

Query: 361 QAEE 364
            A+E
Sbjct: 361 PADE 350

[Close]

BLAST of Bhi11G000409 vs. TAIR 10
Match: AT5G52040.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 369.8 bits (948), Expect = 2.6e-102
Identity = 221/369 (59.89%), Postives = 260/369 (70.46%), Query Frame = 0


Query: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60
           MKP+FCGNFE+DAR+ DLERLF +YGKV+RVDMK+GFAF+YM+DER+ EDAIRALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
           GR GRRLRVEWTK +RG     G  GGSRRSS+  RPSKTLFVINFD  +TRTRDLERHF
Sbjct: 61  GRTGRRLRVEWTKNDRG---GAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHF 120

Query: 121 DPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180
           +PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYS
Sbjct: 121 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYS 180

Query: 181 PDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYG-SRRSPSPYQRER 240
           P+R  D+SP+RRRRSPSPYRRERGSPDYG G S   ++R+R SP YG  RRSPSPY+R R
Sbjct: 181 PERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPSPYKRAR 240

Query: 241 ERGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRER-----PNDDRVPNRSRSP 300
              SPDY R         RRER  S ++    + SP   R       P + R  +RS  P
Sbjct: 241 L--SPDYKR------DDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSPPP 300

Query: 301 YGRERERGSPTGGRDTGYGPRDRERSNPDNGHDQRQSTELEPGESPSYGGTQSPKDRGYN 360
           Y + RE  SP          R R +S+P+NG  +     +E      Y G  SP  R  +
Sbjct: 301 YEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADSP-IRESS 357

Query: 361 SSRSPQAEE 364
            SRSP AEE
Sbjct: 361 PSRSPPAEE 357

[Close]

BLAST of Bhi11G000409 vs. TAIR 10
Match: AT5G52040.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 367.9 bits (943), Expect = 9.7e-102
Identity = 220/369 (59.62%), Postives = 259/369 (70.19%), Query Frame = 0


Query: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60
           MKP+FCGNFE+DAR+ DLERLF +YGKV+RVDMK+GFAF+YM+DER+ EDAIRALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
           GR GRRLRVEWTK +RG     G  GGSRRSS+  RPSKTLFVINFD  +TRTRDLERHF
Sbjct: 61  GRTGRRLRVEWTKNDRG---GAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHF 120

Query: 121 DPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180
           +PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYS
Sbjct: 121 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYS 180

Query: 181 PDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYG-SRRSPSPYQRER 240
           P+R  D+SP+RRRRSPSPYRRERGSPDYG G S   ++R+R SP YG  RRSPSPY+R R
Sbjct: 181 PERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPSPYKRAR 240

Query: 241 ERGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRER-----PNDDRVPNRSRSP 300
              SPDY R         RRER  S ++    + SP   R       P + R  +RS  P
Sbjct: 241 L--SPDYKR------DDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSPPP 300

Query: 301 YGRERERGSPTGGRDTGYGPRDRERSNPDNGHDQRQSTELEPGESPSYGGTQSPKDRGYN 360
           Y + RE  SP          R R +S+P+NG  +     +E      Y G  SP     +
Sbjct: 301 YEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADSPIRE--S 356

Query: 361 SSRSPQAEE 364
            SRSP AEE
Sbjct: 361 PSRSPPAEE 356

[Close]

BLAST of Bhi11G000409 vs. TAIR 10
Match: AT4G25500.3 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 320.9 bits (821), Expect = 1.4e-87
Identity = 196/329 (59.57%), Postives = 235/329 (71.43%), Query Frame = 0


Query: 36  GFAFIYMDDEREGEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNT 95
           GFAF+YM+DER+ EDAIRALDR EFGRKGRRLRVEWTK ERG  +    GGGSRRSS++ 
Sbjct: 3   GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDK--RSGGGSRRSSSSM 62

Query: 96  RPSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNM 155
           RPSKTLFVINFD  +TRTRDLE+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N 
Sbjct: 63  RPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNN 122

Query: 156 SKLMDRVISVEYAVRDDDEKRNGYSPDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISR- 215
           SKLMD+VISVEYAV+DDD + NG+SP+R  D+SP RRRRSPSPY+RERGSPDYG G S  
Sbjct: 123 SKLMDKVISVEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPV 182

Query: 216 SPYRRQRASPAYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRREREISSDHIRAPSHS 275
           + YR++R SP YG RRSPSPY++ R RGSP+YGR R  N SP RRER  S       S S
Sbjct: 183 AAYRKERTSPDYGRRRSPSPYKKSR-RGSPEYGRDRRGNDSPRRRERVASPTKY---SRS 242

Query: 276 PPHQRERPNDDRVPNRSRSPYGRERERGSPTGGRDTGYGPRDRERSNPDNGHDQRQSTEL 335
           P ++RER + +  P +  SP     E  SP          R+R RS+P+NG  +   +  
Sbjct: 243 PNNKRERMSPNHSPFKKESPRNGVGEVESP-------IERRERSRSSPENGQVESPGSIG 302

Query: 336 EPGESPSYGGTQSPKDRGYNSSRSPQAEE 364
                  Y G +SP  +   S RSP A+E
Sbjct: 303 RRDSDGGYDGAESPMQKS-RSPRSPPADE 317

[Close]

BLAST of Bhi11G000409 vs. ExPASy Swiss-Prot
Match: P92965 (Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS40 PE=1 SV=2)

HSP 1 Score: 382.9 bits (982), Expect = 4.1e-105
Identity = 223/364 (61.26%), Postives = 268/364 (73.63%), Query Frame = 0


Query: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60
           MKP+FCGNFE+DAR+ DLERLF +YGKV+RVDMK+GFAF+YM+DER+ EDAIRALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
           GRKGRRLRVEWTK ERG  +    GGGSRRSS++ RPSKTLFVINFD  +TRTRDLE+HF
Sbjct: 61  GRKGRRLRVEWTKSERGGDK--RSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHF 120

Query: 121 DPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180
           +PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+S
Sbjct: 121 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHS 180

Query: 181 PDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISR-SPYRRQRASPAYGSRRSPSPYQRER 240
           P+R  D+SP RRRRSPSPY+RERGSPDYG G S  + YR++R SP YG RRSPSPY++ R
Sbjct: 181 PERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSR 240

Query: 241 ERGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRERPNDDRVPNRSRSPYGRER 300
            RGSP+YGR R  N SP RRER  S       S SP ++RER + +  P +  SP     
Sbjct: 241 -RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMSPNHSPFKKESPRNGVG 300

Query: 301 ERGSPTGGRDTGYGPRDRERSNPDNGHDQRQSTELEPGESPSYGGTQSPKDRGYNSSRSP 360
           E  SP          R+R RS+P+NG  +   +         Y G +SP  +   S RSP
Sbjct: 301 EVESP-------IERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKS-RSPRSP 350

Query: 361 QAEE 364
            A+E
Sbjct: 361 PADE 350

[Close]

BLAST of Bhi11G000409 vs. ExPASy Swiss-Prot
Match: P92966 (Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS41 PE=1 SV=2)

HSP 1 Score: 367.9 bits (943), Expect = 1.4e-100
Identity = 220/369 (59.62%), Postives = 259/369 (70.19%), Query Frame = 0


Query: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60
           MKP+FCGNFE+DAR+ DLERLF +YGKV+RVDMK+GFAF+YM+DER+ EDAIRALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
           GR GRRLRVEWTK +RG     G  GGSRRSS+  RPSKTLFVINFD  +TRTRDLERHF
Sbjct: 61  GRTGRRLRVEWTKNDRG---GAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHF 120

Query: 121 DPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180
           +PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYS
Sbjct: 121 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYS 180

Query: 181 PDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYG-SRRSPSPYQRER 240
           P+R  D+SP+RRRRSPSPYRRERGSPDYG G S   ++R+R SP YG  RRSPSPY+R R
Sbjct: 181 PERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPSPYKRAR 240

Query: 241 ERGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRER-----PNDDRVPNRSRSP 300
              SPDY R         RRER  S ++    + SP   R       P + R  +RS  P
Sbjct: 241 L--SPDYKR------DDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSPPP 300

Query: 301 YGRERERGSPTGGRDTGYGPRDRERSNPDNGHDQRQSTELEPGESPSYGGTQSPKDRGYN 360
           Y + RE  SP          R R +S+P+NG  +     +E      Y G  SP     +
Sbjct: 301 YEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADSPIRE--S 356

Query: 361 SSRSPQAEE 364
            SRSP AEE
Sbjct: 361 PSRSPPAEE 356

[Close]

BLAST of Bhi11G000409 vs. ExPASy Swiss-Prot
Match: P92964 (Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS31 PE=1 SV=2)

HSP 1 Score: 262.7 bits (670), Expect = 6.2e-69
Identity = 150/270 (55.56%), Postives = 186/270 (68.89%), Query Frame = 0


Query: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60
           M+P+F GNFE++ RQ DLERLF +YG+VDRVDMKSG+AF+Y +DER+ EDAIR LD   F
Sbjct: 1   MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
           G + RRL VEW K ERG  R      G  ++ +N +P+KTLFVINFDP  T+  D+E+HF
Sbjct: 61  GYEKRRLSVEWAKGERGRPR------GDAKAPSNLKPTKTLFVINFDPIRTKEHDIEKHF 120

Query: 121 DPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180
           +PYGK+ NVRIRRNF+FVQ+E QEDAT+ALE T  SK++DRV+SVEYA++DDDE+     
Sbjct: 121 EPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDER----- 180

Query: 181 PDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYGSRRS--------P 240
            DRN  +SP   RRS SP  R R SPDYG     SP + +R SP YG  RS        P
Sbjct: 181 DDRNGGRSP---RRSLSPVYRRRPSPDYGR--RPSPGQGRRPSPDYGRARSPEYDRYKGP 240

Query: 241 SPYQRERE----RGSPDYGRGRSPNHSPYR 259
           + Y+R R     R S DYGR RSP +  YR
Sbjct: 241 AAYERRRSPDYGRRSSDYGRQRSPGYDRYR 254

[Close]

BLAST of Bhi11G000409 vs. ExPASy Swiss-Prot
Match: Q9ZPX8 (Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS31A PE=1 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.1e-62
Identity = 142/282 (50.35%), Postives = 185/282 (65.60%), Query Frame = 0


Query: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60
           M+ ++ GNF++D R  DLERLFS++G+V RVDMKSG+AF+Y +DER+ EDAIR  D   F
Sbjct: 1   MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTF 60

Query: 61  GRKGRRLRVEWTKQERGIR-RPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERH 120
           G   R+L VEW K  +G R +P  G     ++ +N RP+KTLFVINFDP  TR RD+ERH
Sbjct: 61  GYGRRKLSVEWAKDFQGERGKPRDG-----KAVSNQRPTKTLFVINFDPIRTRERDMERH 120

Query: 121 FDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGY 180
           F+PYGK+LNVR+RRNFAFVQ+  QEDAT+AL+ T+ SKL+D+V+SVEYA+R+  E+ + Y
Sbjct: 121 FEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAGEREDRY 180

Query: 181 SPDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYGSRRSPSPYQRER 240
                   + +RRRRSPSP  R R SPDY           +R SP Y   + P+PY+R  
Sbjct: 181 --------AGSRRRRSPSPVYRRRPSPDY----------TRRRSPEYDRYKGPAPYER-- 240

Query: 241 ERGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRER 282
            R SPDYGR               SSD+ RA + SP + R R
Sbjct: 241 -RKSPDYGRR--------------SSDYGRARARSPGYDRSR 242

[Close]

BLAST of Bhi11G000409 vs. ExPASy Swiss-Prot
Match: O22315 (Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR34 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.3e-13
Identity = 90/299 (30.10%), Postives = 134/299 (44.82%), Query Frame = 0


Query: 2   KPIFCGNFEFDARQPDLERLFSRYGKVDRVDMK-----SGFAFIYMDDEREGEDAIRALD 61
           + ++ GN   D R+ ++E LFS+YG V ++D+K      G+AF+  DD R+ EDAI   D
Sbjct: 7   RTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRD 66

Query: 62  RREFGRKGRRLRVEW-------TKQERGIRRPGGGGGGSRR----SSTNTRPSKTLFVIN 121
             +F   G RLRVE        +   RG    GG GGG  R    S   +R S+   ++ 
Sbjct: 67  GYDF--DGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFRVLVT 126

Query: 122 FDPYHTRTRDLERHFDPYGKILNVRIRRN----FAFVQYELQEDATRALELTNMSKLMDR 181
             P     +DL+ H    G +   ++ R+       V Y   ED   AL+  + ++  + 
Sbjct: 127 GLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNA 186

Query: 182 VISVEYAVRDDDEKRNGYSPDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSP-YRRQ 241
             +    VR+ D +++  SP R    S +R R       R R         SRSP  +  
Sbjct: 187 FSNGYVRVREYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSR---SRSRSRSPKAKSS 246

Query: 242 RASPAYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQR 280
           R SPA  + RSP P  + R   SP   R RS +  P  ++    S    +P+ SP H R
Sbjct: 247 RRSPAKSTSRSPGPRSKSRS-PSPRRSRSRSRSPLPSVQKEGSKSPSKPSPAKSPIHTR 299

[Close]

BLAST of Bhi11G000409 vs. NCBI nr
Match: XP_038904892.1 (serine/arginine-rich splicing factor RS40-like isoform X1 [Benincasa hispida] >XP_038904893.1 serine/arginine-rich splicing factor RS40-like isoform X1 [Benincasa hispida])

HSP 1 Score: 712.6 bits (1838), Expect = 1.7e-201
Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 0


Query: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60
           MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF
Sbjct: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
           GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120

Query: 121 DPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180
           DPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS
Sbjct: 121 DPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180

Query: 181 PDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYGSRRSPSPYQRERE 240
           PDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYGSRRSPSPYQRERE
Sbjct: 181 PDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYGSRRSPSPYQRERE 240

Query: 241 RGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRERPNDDRVPNRSRSPYGRERE 300
           RGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRERPNDDRVPNRSRSPYGRERE
Sbjct: 241 RGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRERPNDDRVPNRSRSPYGRERE 300

Query: 301 RGSPTGGRDTGYGPRDRERSNPDNGHDQRQSTELEPGESPSYGGTQSPKDRGYNSSRSPQ 360
           RGSPTGGRDTGYGPRDRERSNPDNGHDQRQSTELEPGESPSYGGTQSPKDRGYNSSRSPQ
Sbjct: 301 RGSPTGGRDTGYGPRDRERSNPDNGHDQRQSTELEPGESPSYGGTQSPKDRGYNSSRSPQ 360

Query: 361 AEE 364
           AEE
Sbjct: 361 AEE 363

[Close]

BLAST of Bhi11G000409 vs. NCBI nr
Match: XP_038904894.1 (serine/arginine-rich splicing factor RS40-like isoform X2 [Benincasa hispida])

HSP 1 Score: 706.8 bits (1823), Expect = 9.4e-200
Identity = 362/363 (99.72%), Postives = 362/363 (99.72%), Query Frame = 0


Query: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60
           MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF
Sbjct: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120
           GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120

Query: 121 DPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180
           DPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS
Sbjct: 121 DPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180

Query: 181 PDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYGSRRSPSPYQRERE 240
           PDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYGSRRSPSPYQRERE
Sbjct: 181 PDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYGSRRSPSPYQRERE 240

Query: 241 RGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRERPNDDRVPNRSRSPYGRERE 300
           RGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRERPNDDRVPNRSRSPYGRERE
Sbjct: 241 RGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRERPNDDRVPNRSRSPYGRERE 300

Query: 301 RGSPTGGRDTGYGPRDRERSNPDNGHDQRQSTELEPGESPSYGGTQSPKDRGYNSSRSPQ 360
           RGSPTGGRDTGYGPRDRERSNPDNGHDQRQSTELEPGESPSYGGTQSPKDRGYN SRSPQ
Sbjct: 301 RGSPTGGRDTGYGPRDRERSNPDNGHDQRQSTELEPGESPSYGGTQSPKDRGYN-SRSPQ 360

Query: 361 AEE 364
           AEE
Sbjct: 361 AEE 362

[Close]

BLAST of Bhi11G000409 vs. NCBI nr
Match: XP_011650502.1 (serine/arginine-rich splicing factor RS40 isoform X1 [Cucumis sativus])

HSP 1 Score: 639.4 bits (1648), Expect = 1.9e-179
Identity = 330/367 (89.92%), Postives = 340/367 (92.64%), Query Frame = 0


Query: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60
           MKPIFCGNFE+DARQPDLERLFSRYGKVDRVDMKSGFAFIYM+DERE EDAI ALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP----GGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDL 120
           GRKGRRLRVEWTKQERGIRRP    GG GGGSRRSSTNTRPSKTLFVINFDPYHTR RDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYGSRRSPSPYQ 240
           NGYSPDRN D+SP+R+RRSPSPYRRERGSPDYGNGISRSPYRRQRASP YGSRRSPSPYQ
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ 240

Query: 241 RERERGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRERPNDDRVPNRSRSPYG 300
           RERERGSPDY RGRSP HSPYRRERE SSDHIRAPSHSPPHQRERPNDDR+PNRS SPY 
Sbjct: 241 RERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSPYR 300

Query: 301 RERERGSPTGGRDTGYGPRDRERSNPDNGHDQRQSTELEPGESPSYGGTQSPKDRGYNSS 360
           RERERGSP GGR   Y PRDRER NPDNGHD +++T  EPGE PSY GTQSPK RGYNSS
Sbjct: 301 RERERGSPIGGRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSS 360

Query: 361 RSPQAEE 364
           RSPQAEE
Sbjct: 361 RSPQAEE 367

[Close]

BLAST of Bhi11G000409 vs. NCBI nr
Match: KAE8650115.1 (hypothetical protein Csa_009778 [Cucumis sativus])

HSP 1 Score: 639.4 bits (1648), Expect = 1.9e-179
Identity = 330/367 (89.92%), Postives = 340/367 (92.64%), Query Frame = 0


Query: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60
           MKPIFCGNFE+DARQPDLERLFSRYGKVDRVDMKSGFAFIYM+DERE EDAI ALDRREF
Sbjct: 13  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 72

Query: 61  GRKGRRLRVEWTKQERGIRRP----GGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDL 120
           GRKGRRLRVEWTKQERGIRRP    GG GGGSRRSSTNTRPSKTLFVINFDPYHTR RDL
Sbjct: 73  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDL 132

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 133 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 192

Query: 181 NGYSPDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYGSRRSPSPYQ 240
           NGYSPDRN D+SP+R+RRSPSPYRRERGSPDYGNGISRSPYRRQRASP YGSRRSPSPYQ
Sbjct: 193 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ 252

Query: 241 RERERGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRERPNDDRVPNRSRSPYG 300
           RERERGSPDY RGRSP HSPYRRERE SSDHIRAPSHSPPHQRERPNDDR+PNRS SPY 
Sbjct: 253 RERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSPYR 312

Query: 301 RERERGSPTGGRDTGYGPRDRERSNPDNGHDQRQSTELEPGESPSYGGTQSPKDRGYNSS 360
           RERERGSP GGR   Y PRDRER NPDNGHD +++T  EPGE PSY GTQSPK RGYNSS
Sbjct: 313 RERERGSPIGGRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSS 372

Query: 361 RSPQAEE 364
           RSPQAEE
Sbjct: 373 RSPQAEE 379

[Close]

BLAST of Bhi11G000409 vs. NCBI nr
Match: XP_038904888.1 (serine/arginine-rich splicing factor RS40-like isoform X1 [Benincasa hispida])

HSP 1 Score: 634.4 bits (1635), Expect = 6.0e-178
Identity = 334/370 (90.27%), Postives = 346/370 (93.51%), Query Frame = 0


Query: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60
           MKPIFCGNFE+DARQPDLERLFSRYGKVDRVDMKSGFAFIYM+DER+ EDAIRALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP------GGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTR 120
           GRKGRRLRVEWTKQERGIRRP      GGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTR
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGVGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDE 180
           DLERHFDPYGKIL+VRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDD+
Sbjct: 121 DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDD 180

Query: 181 KRNGYSPDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYGSRRSPSP 240
           KRNGYSPDRN D+SP+R+RRSPSPYRRERGSPDYGNGISRSPYRRQRASP YGSRRSPSP
Sbjct: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240

Query: 241 YQRERERGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRERPNDDRVPNRSRSP 300
           YQRERERGSPDYGRGRSPNHSPYRRERE SSD +RAPSHSPPHQRERPNDDRV NRS SP
Sbjct: 241 YQRERERGSPDYGRGRSPNHSPYRRERERSSDRVRAPSHSPPHQRERPNDDRVHNRSPSP 300

Query: 301 YGRERERGSPTGGRDTGYGPRDRER-SNPDNGHDQRQSTELEPGESPSYGGTQSPKDRGY 360
           YG  RERGSPT GR T Y PRDRER SNPDNGHDQ+Q+T +EPGESPSYGGTQSPK RGY
Sbjct: 301 YG--RERGSPTDGRGTSYSPRDRERSSNPDNGHDQQQNTVVEPGESPSYGGTQSPKHRGY 360

Query: 361 NSSRSPQAEE 364
             SRSPQAEE
Sbjct: 361 -GSRSPQAEE 367

[Close]

BLAST of Bhi11G000409 vs. ExPASy TrEMBL
Match: A0A0A0L7I3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063660 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 9.0e-180
Identity = 330/367 (89.92%), Postives = 340/367 (92.64%), Query Frame = 0


Query: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60
           MKPIFCGNFE+DARQPDLERLFSRYGKVDRVDMKSGFAFIYM+DERE EDAI ALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP----GGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDL 120
           GRKGRRLRVEWTKQERGIRRP    GG GGGSRRSSTNTRPSKTLFVINFDPYHTR RDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYGSRRSPSPYQ 240
           NGYSPDRN D+SP+R+RRSPSPYRRERGSPDYGNGISRSPYRRQRASP YGSRRSPSPYQ
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ 240

Query: 241 RERERGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRERPNDDRVPNRSRSPYG 300
           RERERGSPDY RGRSP HSPYRRERE SSDHIRAPSHSPPHQRERPNDDR+PNRS SPY 
Sbjct: 241 RERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSPYR 300

Query: 301 RERERGSPTGGRDTGYGPRDRERSNPDNGHDQRQSTELEPGESPSYGGTQSPKDRGYNSS 360
           RERERGSP GGR   Y PRDRER NPDNGHD +++T  EPGE PSY GTQSPK RGYNSS
Sbjct: 301 RERERGSPIGGRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSS 360

Query: 361 RSPQAEE 364
           RSPQAEE
Sbjct: 361 RSPQAEE 367

[Close]

BLAST of Bhi11G000409 vs. ExPASy TrEMBL
Match: A0A1S4DXA1 (serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491067 PE=4 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 1.5e-174
Identity = 332/379 (87.60%), Postives = 346/379 (91.29%), Query Frame = 0


Query: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60
           MKPIFCGNFE+DARQPDLERLFSRYGKVDRVDMKSGFAFIYM+DER+ EDAIRALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP----------GGGGGGSRRSSTNTRPSKTLFVINFDPYH 120
           GRKGRRLRVEWTKQERGIRRP          GGGGGGSRRSSTNTRPSKTLFVINFDPYH
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYH 120

Query: 121 TRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180
           TRTRDLERHFDPYGKIL+VRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR
Sbjct: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180

Query: 181 DDDEKRNGYSPDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYGSRR 240
           DDD+KRNGYSPDRN D+SP+R+RRSPSPYRRERGSPDYGNGISRSPYRRQRASP YGSRR
Sbjct: 181 DDDDKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR 240

Query: 241 SPSPYQRERERGSPDYGRGRSPNHSPYRREREISSDHIR-APSHSPPHQRERPNDDRVPN 300
           SPSPYQRERERGSPDYGRGRSPNHSPYRRERE SSDH+R APS+ P HQRERPNDDRVPN
Sbjct: 241 SPSPYQRERERGSPDYGRGRSPNHSPYRRERERSSDHVRGAPSNRPTHQRERPNDDRVPN 300

Query: 301 RSRSPYGRERERGSPTGGRDTGYGPRDRER-SNPDN----GHDQRQSTELEPGESPSYGG 360
           RS SPYGRERE+GSPT GR T Y PRDRER SNPDN    GHDQ+Q+   EPGESP+YG 
Sbjct: 301 RSPSPYGREREKGSPTDGRGTSYSPRDRERSSNPDNGHDHGHDQQQNMVPEPGESPNYGD 360

Query: 361 TQSPKDRGYNSSRSPQAEE 364
           TQSPK RGY SSRSPQAEE
Sbjct: 361 TQSPKHRGY-SSRSPQAEE 378

[Close]

BLAST of Bhi11G000409 vs. ExPASy TrEMBL
Match: A0A5A7VJB8 (Serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G002140 PE=4 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 1.5e-174
Identity = 332/379 (87.60%), Postives = 346/379 (91.29%), Query Frame = 0


Query: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60
           MKPIFCGNFE+DARQPDLERLFSRYGKVDRVDMKSGFAFIYM+DER+ EDAIRALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP----------GGGGGGSRRSSTNTRPSKTLFVINFDPYH 120
           GRKGRRLRVEWTKQERGIRRP          GGGGGGSRRSSTNTRPSKTLFVINFDPYH
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYH 120

Query: 121 TRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180
           TRTRDLERHFDPYGKIL+VRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR
Sbjct: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180

Query: 181 DDDEKRNGYSPDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYGSRR 240
           DDD+KRNGYSPDRN D+SP+R+RRSPSPYRRERGSPDYGNGISRSPYRRQRASP YGSRR
Sbjct: 181 DDDDKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR 240

Query: 241 SPSPYQRERERGSPDYGRGRSPNHSPYRREREISSDHIR-APSHSPPHQRERPNDDRVPN 300
           SPSPYQRERERGSPDYGRGRSPNHSPYRRERE SSDH+R APS+ P HQRERPNDDRVPN
Sbjct: 241 SPSPYQRERERGSPDYGRGRSPNHSPYRRERERSSDHVRGAPSNRPTHQRERPNDDRVPN 300

Query: 301 RSRSPYGRERERGSPTGGRDTGYGPRDRER-SNPDN----GHDQRQSTELEPGESPSYGG 360
           RS SPYGRERE+GSPT GR T Y PRDRER SNPDN    GHDQ+Q+   EPGESP+YG 
Sbjct: 301 RSPSPYGREREKGSPTDGRGTSYSPRDRERSSNPDNGHDHGHDQQQNMVPEPGESPNYGD 360

Query: 361 TQSPKDRGYNSSRSPQAEE 364
           TQSPK RGY SSRSPQAEE
Sbjct: 361 TQSPKHRGY-SSRSPQAEE 378

[Close]

BLAST of Bhi11G000409 vs. ExPASy TrEMBL
Match: A0A1S3BL99 (serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491066 PE=4 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 2.5e-174
Identity = 325/368 (88.32%), Postives = 336/368 (91.30%), Query Frame = 0


Query: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60
           MKPIFCGNFE+DARQPDLERLFSRYGKVDRVDMKSGFAFIYM+DERE EDAI ALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP----GGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDL 120
           GRKGRRLRVEWTKQERGIRRP    GG GGGSRRSS+NTRPSKTLFVINFDPYHTR RDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYGSRRSPSPYQ 240
           NGYSPDRN D+SP+R+RRSPSPYRRERGSPDYGNGISRSPYRRQR SP YGSRRSPSPYQ
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ 240

Query: 241 RERERGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRERPNDDRVPNRSRSPYG 300
           RERERGSPDYGRGRSP HSPYRRERE SSDH RAPS SP HQRERPN DR+PNRS SPY 
Sbjct: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR 300

Query: 301 RERERGSP-TGGRDTGYGPRDRERSNPDNGHDQRQSTELEPGESPSYGGTQSPKDRGYNS 360
           RERER SP   GR T Y PRDRERSNPDNGHD +++T  EPGE PSY GTQSPK RGYNS
Sbjct: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360

Query: 361 SRSPQAEE 364
           SRSPQAEE
Sbjct: 361 SRSPQAEE 368

[Close]

BLAST of Bhi11G000409 vs. ExPASy TrEMBL
Match: A0A0A0L2A0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063650 PE=4 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 2.1e-173
Identity = 330/378 (87.30%), Postives = 343/378 (90.74%), Query Frame = 0


Query: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60
           MKPIFCGNFE+DARQPDLERLFSRYGKVDRVDMKSGFAFIYM+DER+ EDAIRALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP----------GGGGGGSRRSSTNTRPSKTLFVINFDPYH 120
           GRKGRRLRVEWTKQERGIRRP          GGGGGGSRRSSTNTRPSKTLFVINFDPYH
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGPGGGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYH 120

Query: 121 TRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180
           TRTRDLERHFDPYGKIL+VRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR
Sbjct: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180

Query: 181 DDDEKRNGYSPDRNHDKSPNRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPAYGSRR 240
           DDD+KRNGYSPDRN D+SP+R+RRS SPYRRERGSPDYGNGISRSPYRRQRASP YGSRR
Sbjct: 181 DDDDKRNGYSPDRNRDRSPDRKRRSSSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR 240

Query: 241 SPSPYQRERERGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRERPNDDRVPNR 300
           SPSPYQRERERGSPDYGRGRSPNHSPYRRERE SSDH+R PSH P HQRERPNDDRVPNR
Sbjct: 241 SPSPYQRERERGSPDYGRGRSPNHSPYRRERERSSDHVRTPSHRPSHQRERPNDDRVPNR 300

Query: 301 SRSPYGRERERGSPTGGRDTGYGPRDRER-SNPDN----GHDQRQSTELEPGESPSYGGT 360
           S SPYGR RE+GSP  GR T Y PRDRER SNPDN    GHDQ+Q+T  EPGESP+YGGT
Sbjct: 301 SPSPYGRGREKGSP-DGRGTSYSPRDRERSSNPDNGHDHGHDQQQTTIPEPGESPNYGGT 360

Query: 361 QSPKDRGYNSSRSPQAEE 364
           QSPK RGY  SRSPQAEE
Sbjct: 361 QSPKRRGY-GSRSPQAEE 376

The following BLAST results are available for this feature:

BLAST of Bhi11G000409 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25500.1	2.9e-106	61.26	arginine/serine-rich splicing factor 35	[more]
AT4G25500.4	2.9e-106	61.26	arginine/serine-rich splicing factor 35	[more]
AT5G52040.2	2.6e-102	59.89	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G52040.1	9.7e-102	59.62	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G25500.3	1.4e-87	59.57	arginine/serine-rich splicing factor 35	[more]

BLAST of Bhi11G000409 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92965	4.1e-105	61.26	Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
P92966	1.4e-100	59.62	Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
P92964	6.2e-69	55.56	Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS3...	[more]
Q9ZPX8	1.1e-62	50.35	Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS...	[more]
O22315	1.3e-13	30.10	Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR3...	[more]

BLAST of Bhi11G000409 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904892.1	1.7e-201	100.00	serine/arginine-rich splicing factor RS40-like isoform X1 [Benincasa hispida] >X...	[more]
XP_038904894.1	9.4e-200	99.72	serine/arginine-rich splicing factor RS40-like isoform X2 [Benincasa hispida]	[more]
XP_011650502.1	1.9e-179	89.92	serine/arginine-rich splicing factor RS40 isoform X1 [Cucumis sativus]	[more]
KAE8650115.1	1.9e-179	89.92	hypothetical protein Csa_009778 [Cucumis sativus]	[more]
XP_038904888.1	6.0e-178	90.27	serine/arginine-rich splicing factor RS40-like isoform X1 [Benincasa hispida]	[more]

BLAST of Bhi11G000409 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7I3	9.0e-180	89.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063660 PE=4 SV=1	[more]
A0A1S4DXA1	1.5e-174	87.60	serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=365...	[more]
A0A5A7VJB8	1.5e-174	87.60	Serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo var. m...	[more]
A0A1S3BL99	2.5e-174	88.32	serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=365...	[more]
A0A0A0L2A0	2.1e-173	87.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063650 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 3..70 e-value: 5.3E-13 score: 59.2 coord: 100..166 e-value: 2.4E-16 score: 70.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 101..163 e-value: 4.2E-12 score: 45.7 coord: 4..62 e-value: 1.0E-10 score: 41.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 2..74 score: 15.715584
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 99..170 score: 15.1357
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..93 e-value: 1.2E-17 score: 66.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 94..180 e-value: 8.6E-20 score: 72.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..363
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 334..363
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..333
None	No IPR available	PANTHER	PTHR23147:SF165	BNAC01G41640D PROTEIN	coord: 4..208
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 4..208
None	No IPR available	CDD	cd12466	RRM2_AtRSp31_like	coord: 100..169 e-value: 1.81814E-39 score: 132.672
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 4..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M000409	Bhi11M000409	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0016607	nuclear speck
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding