Bhi11G000072 (gene) Wax gourd (B227) v1

Overview


Name	Bhi11G000072
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	E3 ubiquitin-protein ligase RNF34
Location	chr11: 2012174 .. 2015095 (-)
RNA-Seq Expression	Bhi11G000072
Synteny	Bhi11G000072

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAAAGTGTTCAGGTTTGAATTCCTCGTTTCAGAAAATAATAATAATAAAATCCTATTTTCTGTTGGCCTATCTTAAACCCTATTTCACCTTCAGCTGCCCCCCTCCCTCTCCTTCCCAGCCACTGCATCTCGCGCCGCCGCACGCCGTCTCAGTGGGTGCCGCAATCTCAGCCTTCCGACGAAATCGCCGCCGCTGCCTCCCTCCTTCCAAATTCAAGAGTTCCACAGGGGATAAAACGAAGAACAATTCCCATTCGAACGATCTTTATTCCCCAAACCAATTTCTCGGCTCTACTGAAGCCAATCGCCGGTCGGCGAACAGTTTCTCGGCGACGCCTCTTCAGCTCTCTCTTCCTTCCTCACAGTCTCGAAAAGTGTTTCCGGCCGCTGCTCTCACGGCCGACGCCCGGCCGTTGTAATTGTGACTATCTCTATTTCTCGGACAAAAACGCAAGTTCATCCGACTTTCTCTGCCCCTCAGTCTCTCAATTTATTTCTTTCCCTCTAGCCGTGTCGTGATTTCTTCTAGATTACGGATGGAGGACTTCTTTTTCTTTGCAGCTAGAAGAACGGAAAGATGCGACATAGCAAGGATCTTTTGTATTTGGAGCGGAAGGATTTATCCTCTTCGTCTTTAGGTAGTTTTTATGGTCGATTTTTCTTCGTTTTAGCTTACATTGATTGTTGGGATCAGTAATTGTTTATTAAACTAATTTTTGCCTTATATCAGAGTCCTCACTGCTAGTTTGTAAAAAGAACTCAACGTCCAAGGAGCCCCGTCGGAATGAAAAACCGATTACTGAACCGGCTTCAAAAAGCCTAGGTACATATGTCCCTTTTGATTTTTAAATTTTTTTTTTTTATTATCTTTTGCTGCTTAGTTTAGTTTGAAATCTGGACACGAGCGTAGAATTTTTACTGCATTGACATCTAGCAGGCTAATTGCGGACATGGGCACACCCTTTAAATCACAATTTCAACTGTCTTCCCTAGTTTTGTGTTTAATGTTGGCTAGATTGTAATGTTTAGGAAATGTTAGATTAGTCAAATAGTACAATTATTTGATCAAGGATCCTCTTCCCAAAGAAGGTAATAAATATGAAAATTACTTGGTCGTATCTTAAACTACACCTATCTTTGTGCATTCCATCTAATTGTTCAATCATGGTTACCATGTGGCAAACTTTTCTTACATGGATTTATCTCGAGATGCACTCAGTATTTGAATATTATTGTAAAATAACGACTTTGCTTGTTGCAAGAGCTATGCATGGACATGTATGCCTGATGGCTGGTTAGAAATACTCACTGGTTGATACCCTTATCTTGATTTCCTCATTGTCTGGAAATATATTGGTTTTTTTAGTGCAATTTTTTTTTTTGCTTTTGCAAGTTTTTTTTTTTTTTTTCTTTTTTTGGTGGTTGTTGTTTCATATGCAACTGATGAGATGTATTTCCAGTTGCTGGTTTAAAACTTTGTGTAGCGGTATTCTATGCAGTTTGAAGTTACATACAGTGGTTGGAAAATTAGTGACTATATAACATTGTAGTGTTGTTAGGTATACTAACTGTTGTCAACTTTAGCACTATCATGAGATGTAATGTAGAGGTTGTTTGTAGCAACTGTTTCCAACTGTATAACATTGTTTACTTCAGCTGAAAACTTACCTCCCCCTTTTATGCCATTCGAAGCAAGCAAATTTCTTTTGGAGTACTGCACTTCGAGCATAGAACATTCAGCATCACAATTTGAATATATTATGGTTCTCGTTTTTTCTTAGGAGTTCCATGCGTTGCTTACTTCCTTTTCACTTCTTGTAGTATTGGGAAGAGTCAAAGATTTTTTAGGAGTAATATCAGAAGCTAATAAAAAGCTGCAAATGGATGCAAAGGTTTGCATAGTGAACAATTACTACTTACGTTTGAATCTAAACCCAAAAAGCTTTCATTGTTACTGATCTGTGCATTCTTGTTAATTGTCATAGGACAATGCTGAAAAATATGATATCGAAGCCCTCGATGGCAATGAATCTAAAGTGATTGAATTGGTAAGTCACTTTTCTTTGTAATGTTACGTTGTGGATGTGGTAGCATGGTTTTTCGTCATTCATAATGCCATGATTTGATCTAAACAGGACCTGATGTTGGGTATTGCCGATCTTCATACTCCTGAAGCTGTGGCCGCTGCTGAATCTGCAATAATTGGTAATCAGCCTGTAATTCCATTGACTTGTAGTAGTAGTAGTGAGTCAGAATCTGAAGAGAGTAGTGATGATAGTATTACCAGTAACGACAATAATGATGACAATGAAAAGAGCGACGATCAGAATACTGACCACAGTAACAGATCGTCAGTTAAACTCAAAAGATCAAATTCTAGGAAAACCAGCTGTAGAAGTAAAAGCAAAGGAAAAAGTAAATCAGAAAAGCGACCAAAGATTCTAGAGCTCTCTTAAGAGCCATCTTTTGATCACACCTATTGCGTCAATATGGATGTGTCGTTATGGTTTAAAAGTTTCATTCACTTTTGGTGTCATTGGGGGAAGTATAGGAAGCTTCTGAAGCTTGCACTGAGAAAATCACCAAGGTAGATTGCCAGCCTAGTCCTTTAAGCTTGGGCGGTAGAAATCAATTTCGCGCGACTGTATGATTTCAAGTTTTTTCTCTCCTCACCTTGATCATGATTTCAATTTTCAAGTGCAGATAAGGTGATGTCTTTATGCATTTCTTTTAGAAACTCCAATATAATTTCAAGTTGTAATTATTCTTGGTCAGTTTGTCAGCCTTGGTTTGTATACTTGATGTCGAACTTCGATATTTCACAATGGCCATTTTTTTCACTTGAGCATGAATCATCATCCTTTTTTCTTTTTTTTTTTCCCTTATATGTTGTAGCTTCAATGGAGAAGTGTAGTTTTGG

mRNA sequence

CTCAAAGTGTTCAGGTTTGAATTCCTCGTTTCAGAAAATAATAATAATAAAATCCTATTTTCTGTTGGCCTATCTTAAACCCTATTTCACCTTCAGCTGCCCCCCTCCCTCTCCTTCCCAGCCACTGCATCTCGCGCCGCCGCACGCCGTCTCAGTGGGTGCCGCAATCTCAGCCTTCCGACGAAATCGCCGCCGCTGCCTCCCTCCTTCCAAATTCAAGAGTTCCACAGGGGATAAAACGAAGAACAATTCCCATTCGAACGATCTTTATTCCCCAAACCAATTTCTCGGCTCTACTGAAGCCAATCGCCGGTCGGCGAACAGTTTCTCGGCGACGCCTCTTCAGCTCTCTCTTCCTTCCTCACAGTCTCGAAAAGTGTTTCCGGCCGCTGCTCTCACGGCCGACGCCCGGCCGTTGTAATTGTGACTATCTCTATTTCTCGGACAAAAACCTAGAAGAACGGAAAGATGCGACATAGCAAGGATCTTTTGTATTTGGAGCGGAAGGATTTATCCTCTTCGTCTTTAGAGTCCTCACTGCTAGTTTGTAAAAAGAACTCAACGTCCAAGGAGCCCCGTCGGAATGAAAAACCGATTACTGAACCGGCTTCAAAAAGCCTAGTATTGGGAAGAGTCAAAGATTTTTTAGGAGTAATATCAGAAGCTAATAAAAAGCTGCAAATGGATGCAAAGGACAATGCTGAAAAATATGATATCGAAGCCCTCGATGGCAATGAATCTAAAGTGATTGAATTGGACCTGATGTTGGGTATTGCCGATCTTCATACTCCTGAAGCTGTGGCCGCTGCTGAATCTGCAATAATTGGTAATCAGCCTGTAATTCCATTGACTTGTAGTAGTAGTAGTGAGTCAGAATCTGAAGAGAGTAGTGATGATAGTATTACCAGTAACGACAATAATGATGACAATGAAAAGAGCGACGATCAGAATACTGACCACAGTAACAGATCGTCAGTTAAACTCAAAAGATCAAATTCTAGGAAAACCAGCTGTAGAAGTAAAAGCAAAGGAAAAAGTAAATCAGAAAAGCGACCAAAGATTCTAGAGCTCTCTTAAGAGCCATCTTTTGATCACACCTATTGCGTCAATATGGATGTGTCGTTATGGTTTAAAAGTTTCATTCACTTTTGGTGTCATTGGGGGAAGTATAGGAAGCTTCTGAAGCTTGCACTGAGAAAATCACCAAGGTAGATTGCCAGCCTAGTCCTTTAAGCTTGGGCGGTAGAAATCAATTTCGCGCGACTGTATGATTTCAAGTTTTTTCTCTCCTCACCTTGATCATGATTTCAATTTTCAAGTGCAGATAAGGTGATGTCTTTATGCATTTCTTTTAGAAACTCCAATATAATTTCAAGTTGTAATTATTCTTGGTCAGTTTGTCAGCCTTGGTTTGTATACTTGATGTCGAACTTCGATATTTCACAATGGCCATTTTTTTCACTTGAGCATGAATCATCATCCTTTTTTCTTTTTTTTTTTCCCTTATATGTTGTAGCTTCAATGGAGAAGTGTAGTTTTGG

Coding sequence (CDS)

ATGCGACATAGCAAGGATCTTTTGTATTTGGAGCGGAAGGATTTATCCTCTTCGTCTTTAGAGTCCTCACTGCTAGTTTGTAAAAAGAACTCAACGTCCAAGGAGCCCCGTCGGAATGAAAAACCGATTACTGAACCGGCTTCAAAAAGCCTAGTATTGGGAAGAGTCAAAGATTTTTTAGGAGTAATATCAGAAGCTAATAAAAAGCTGCAAATGGATGCAAAGGACAATGCTGAAAAATATGATATCGAAGCCCTCGATGGCAATGAATCTAAAGTGATTGAATTGGACCTGATGTTGGGTATTGCCGATCTTCATACTCCTGAAGCTGTGGCCGCTGCTGAATCTGCAATAATTGGTAATCAGCCTGTAATTCCATTGACTTGTAGTAGTAGTAGTGAGTCAGAATCTGAAGAGAGTAGTGATGATAGTATTACCAGTAACGACAATAATGATGACAATGAAAAGAGCGACGATCAGAATACTGACCACAGTAACAGATCGTCAGTTAAACTCAAAAGATCAAATTCTAGGAAAACCAGCTGTAGAAGTAAAAGCAAAGGAAAAAGTAAATCAGAAAAGCGACCAAAGATTCTAGAGCTCTCTTAA

Protein sequence

MRHSKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPRRNEKPITEPASKSLVLGRVKDFLGVISEANKKLQMDAKDNAEKYDIEALDGNESKVIELDLMLGIADLHTPEAVAAAESAIIGNQPVIPLTCSSSSESESEESSDDSITSNDNNDDNEKSDDQNTDHSNRSSVKLKRSNSRKTSCRSKSKGKSKSEKRPKILELS

Homology

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BLAST of Bhi11G000072 vs. TAIR 10
Match: AT1G71430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 64 Blast hits to 64 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 109.0 bits (271), Expect = 4.5e-24
Identity = 77/145 (53.10%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 5   KDLLYLERKDLSSSS-LESSLLVC---KKNSTSKEPRRNEKPITEPASKSLVLGRVKDFL 64
           KDLL LE K+ SSSS ++S+LL+C    K     E     KP   P  KS +LG++K FL
Sbjct: 8   KDLLKLELKNPSSSSAMDSALLMCTDKNKKKKKMEAPPPSKPTIAPVPKSQLLGKLKGFL 67

Query: 65  GVISEANKKLQMDAKDNAEKYDIEALDGNESKVIELDLMLGIADLHTPEAVAAAESAIIG 124
           GV++EANKK    ++ N E Y+IEAL GNES++IE+DLMLG+ADL+TPEAV+AAE+AI G
Sbjct: 68  GVMAEANKK----SEANPEAYNIEALTGNESELIEMDLMLGVADLNTPEAVSAAEAAIAG 127

Query: 125 NQPVIPLTCSSS-----SESESEES 141
             P      SSS     SESE EES
Sbjct: 128 IGPAAESGDSSSDDESDSESEGEES 148

[Close]

BLAST of Bhi11G000072 vs. NCBI nr
Match: XP_038903017.1 (uncharacterized protein LOC120089721 [Benincasa hispida] >XP_038903019.1 uncharacterized protein LOC120089721 [Benincasa hispida])

HSP 1 Score: 354.4 bits (908), Expect = 6.6e-94
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MRHSKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPRRNEKPITEPASKSLVLGRVKDFL 60
           MRHSKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPRRNEKPITEPASKSLVLGRVKDFL
Sbjct: 1   MRHSKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPRRNEKPITEPASKSLVLGRVKDFL 60

Query: 61  GVISEANKKLQMDAKDNAEKYDIEALDGNESKVIELDLMLGIADLHTPEAVAAAESAIIG 120
           GVISEANKKLQMDAKDNAEKYDIEALDGNESKVIELDLMLGIADLHTPEAVAAAESAIIG
Sbjct: 61  GVISEANKKLQMDAKDNAEKYDIEALDGNESKVIELDLMLGIADLHTPEAVAAAESAIIG 120

Query: 121 NQPVIPLTCSSSSESESEESSDDSITSNDNNDDNEKSDDQNTDHSNRSSVKLKRSNSRKT 180
           NQPVIPLTCSSSSESESEESSDDSITSNDNNDDNEKSDDQNTDHSNRSSVKLKRSNSRKT
Sbjct: 121 NQPVIPLTCSSSSESESEESSDDSITSNDNNDDNEKSDDQNTDHSNRSSVKLKRSNSRKT 180

Query: 181 SCRSKSKGKSKSEKRPKILELS 203
           SCRSKSKGKSKSEKRPKILELS
Sbjct: 181 SCRSKSKGKSKSEKRPKILELS 202

[Close]

BLAST of Bhi11G000072 vs. NCBI nr
Match: XP_004147238.2 (uncharacterized protein LOC101206707 isoform X2 [Cucumis sativus])

HSP 1 Score: 308.1 bits (788), Expect = 5.4e-80
Identity = 183/203 (90.15%), Postives = 191/203 (94.09%), Query Frame = 0


Query: 1   MRH-SKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPRRNEKPITEPASKSLVLGRVKDF 60
           MRH SKDLLYLERKDLSSSSLESSLLVCKKNSTSK+P RNEKPITEPASKSLVLGRVKDF
Sbjct: 1   MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKDPTRNEKPITEPASKSLVLGRVKDF 60

Query: 61  LGVISEANKKLQMDAKDNAEKYDIEALDGNESKVIELDLMLGIADLHTPEAVAAAESAII 120
           LGVISEANKKLQMD+K+NAEKYDIEALDGNES+VI+LDLMLGIADLHTPEAV AAESAII
Sbjct: 61  LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII 120

Query: 121 GNQPVIPLTCSSSSESESEESSDDSITSNDNNDDNEKSDDQNTDHSNRSSVKLKRSNSRK 180
           GN PVIPLTC SSSESESEESSDDSITS+ +NDDNEKSDDQ TD SNR SVKLKRSNSRK
Sbjct: 121 GNHPVIPLTC-SSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSNSRK 180

Query: 181 TSCRSKSKGKSKSEKRPKILELS 203
           TSCRSKSKGK KS+KRPKI  LS
Sbjct: 181 TSCRSKSKGKGKSKKRPKIQVLS 202

[Close]

BLAST of Bhi11G000072 vs. NCBI nr
Match: XP_008448773.1 (PREDICTED: uncharacterized protein LOC103490838 [Cucumis melo] >KAA0041045.1 E3 ubiquitin-protein ligase RNF34 [Cucumis melo var. makuwa] >TYK12053.1 E3 ubiquitin-protein ligase RNF34 [Cucumis melo var. makuwa])

HSP 1 Score: 302.8 bits (774), Expect = 2.3e-78
Identity = 180/203 (88.67%), Postives = 192/203 (94.58%), Query Frame = 0


Query: 1   MRH-SKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPRRNEKPITEPASKSLVLGRVKDF 60
           MRH SKDLL+LERKDLS+SSLESSLLVCKKNSTSKEP RNEKPITEPASKSLVLGRV+DF
Sbjct: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNEKPITEPASKSLVLGRVQDF 60

Query: 61  LGVISEANKKLQMDAKDNAEKYDIEALDGNESKVIELDLMLGIADLHTPEAVAAAESAII 120
           LGVISEANKKLQMD+K+NA+KYDIEALDGNES+VI+LDLMLGIADLHTPEAVAAAESAII
Sbjct: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNQPVIPLTCSSSSESESEESSDDSITSNDNNDDNEKSDDQNTDHSNRSSVKLKRSNSRK 180
           GN PVIPLTC SSSESESEESSDDSITS+ +N+DNEKSDDQNTD SNR SVKLKRSNSRK
Sbjct: 121 GNHPVIPLTC-SSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRK 180

Query: 181 TSCRSKSKGKSKSEKRPKILELS 203
            SCRSKSKGK KS+KRPKI  LS
Sbjct: 181 ASCRSKSKGKGKSKKRPKIQVLS 202

[Close]

BLAST of Bhi11G000072 vs. NCBI nr
Match: XP_011650372.1 (uncharacterized protein LOC101206707 isoform X1 [Cucumis sativus] >KGN55834.2 hypothetical protein Csa_010190 [Cucumis sativus])

HSP 1 Score: 302.4 bits (773), Expect = 3.0e-78
Identity = 183/207 (88.41%), Postives = 191/207 (92.27%), Query Frame = 0


Query: 1   MRH-SKDLLYLERKDLSSSSL----ESSLLVCKKNSTSKEPRRNEKPITEPASKSLVLGR 60
           MRH SKDLLYLERKDLSSSSL    ESSLLVCKKNSTSK+P RNEKPITEPASKSLVLGR
Sbjct: 1   MRHPSKDLLYLERKDLSSSSLGVFNESSLLVCKKNSTSKDPTRNEKPITEPASKSLVLGR 60

Query: 61  VKDFLGVISEANKKLQMDAKDNAEKYDIEALDGNESKVIELDLMLGIADLHTPEAVAAAE 120
           VKDFLGVISEANKKLQMD+K+NAEKYDIEALDGNES+VI+LDLMLGIADLHTPEAV AAE
Sbjct: 61  VKDFLGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAE 120

Query: 121 SAIIGNQPVIPLTCSSSSESESEESSDDSITSNDNNDDNEKSDDQNTDHSNRSSVKLKRS 180
           SAIIGN PVIPLTC SSSESESEESSDDSITS+ +NDDNEKSDDQ TD SNR SVKLKRS
Sbjct: 121 SAIIGNHPVIPLTC-SSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRS 180

Query: 181 NSRKTSCRSKSKGKSKSEKRPKILELS 203
           NSRKTSCRSKSKGK KS+KRPKI  LS
Sbjct: 181 NSRKTSCRSKSKGKGKSKKRPKIQVLS 206

[Close]

BLAST of Bhi11G000072 vs. NCBI nr
Match: XP_023005549.1 (uncharacterized protein LOC111498503 isoform X1 [Cucurbita maxima])

HSP 1 Score: 289.3 bits (739), Expect = 2.6e-74
Identity = 174/206 (84.47%), Postives = 187/206 (90.78%), Query Frame = 0


Query: 1   MRH-SKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPRRNEKPITEPASKSLVLGRVKDF 60
           MRH SKDLL LERKDL SSSLESSLLVCKKNSTSKEP RNEKPITEPA KS VLGRVKDF
Sbjct: 1   MRHASKDLLCLERKDLPSSSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 60

Query: 61  LGVISEANKKLQMDAKDNAEKYDIEALDGNESKVIELDLMLGIADLHTPEAVAAAESAII 120
           LGV+SEANKKLQ+DAKD+AEKYDIEAL+GNES+VIELDLMLGIADLHTPEAVAAAESAII
Sbjct: 61  LGVLSEANKKLQLDAKDDAEKYDIEALNGNESEVIELDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNQPVIPLTC---SSSSESESEESSDDSITSNDNNDDNEKSDDQNTDHSNRSSVKLKRSN 180
           GNQPVIPL C   SSSSESESEESSDDSITS++N++DNEKSD QNTD  NR SVKLKRS 
Sbjct: 121 GNQPVIPLNCSSSSSSSESESEESSDDSITSDNNDNDNEKSDTQNTDRGNRLSVKLKRSK 180

Query: 181 SRKTSCRSKSKGKSKSEKRPKILELS 203
           SR+ +CRS+S+ K KS KRPKILELS
Sbjct: 181 SRRANCRSESREKGKSNKRPKILELS 206

[Close]

BLAST of Bhi11G000072 vs. ExPASy TrEMBL
Match: A0A0A0L448 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017130 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.6e-80
Identity = 183/203 (90.15%), Postives = 191/203 (94.09%), Query Frame = 0


Query: 1   MRH-SKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPRRNEKPITEPASKSLVLGRVKDF 60
           MRH SKDLLYLERKDLSSSSLESSLLVCKKNSTSK+P RNEKPITEPASKSLVLGRVKDF
Sbjct: 1   MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKDPTRNEKPITEPASKSLVLGRVKDF 60

Query: 61  LGVISEANKKLQMDAKDNAEKYDIEALDGNESKVIELDLMLGIADLHTPEAVAAAESAII 120
           LGVISEANKKLQMD+K+NAEKYDIEALDGNES+VI+LDLMLGIADLHTPEAV AAESAII
Sbjct: 61  LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII 120

Query: 121 GNQPVIPLTCSSSSESESEESSDDSITSNDNNDDNEKSDDQNTDHSNRSSVKLKRSNSRK 180
           GN PVIPLTC SSSESESEESSDDSITS+ +NDDNEKSDDQ TD SNR SVKLKRSNSRK
Sbjct: 121 GNHPVIPLTC-SSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSNSRK 180

Query: 181 TSCRSKSKGKSKSEKRPKILELS 203
           TSCRSKSKGK KS+KRPKI  LS
Sbjct: 181 TSCRSKSKGKGKSKKRPKIQVLS 202

[Close]

BLAST of Bhi11G000072 vs. ExPASy TrEMBL
Match: A0A5D3CJH5 (E3 ubiquitin-protein ligase RNF34 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00670 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.1e-78
Identity = 180/203 (88.67%), Postives = 192/203 (94.58%), Query Frame = 0


Query: 1   MRH-SKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPRRNEKPITEPASKSLVLGRVKDF 60
           MRH SKDLL+LERKDLS+SSLESSLLVCKKNSTSKEP RNEKPITEPASKSLVLGRV+DF
Sbjct: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNEKPITEPASKSLVLGRVQDF 60

Query: 61  LGVISEANKKLQMDAKDNAEKYDIEALDGNESKVIELDLMLGIADLHTPEAVAAAESAII 120
           LGVISEANKKLQMD+K+NA+KYDIEALDGNES+VI+LDLMLGIADLHTPEAVAAAESAII
Sbjct: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNQPVIPLTCSSSSESESEESSDDSITSNDNNDDNEKSDDQNTDHSNRSSVKLKRSNSRK 180
           GN PVIPLTC SSSESESEESSDDSITS+ +N+DNEKSDDQNTD SNR SVKLKRSNSRK
Sbjct: 121 GNHPVIPLTC-SSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRK 180

Query: 181 TSCRSKSKGKSKSEKRPKILELS 203
            SCRSKSKGK KS+KRPKI  LS
Sbjct: 181 ASCRSKSKGKGKSKKRPKIQVLS 202

[Close]

BLAST of Bhi11G000072 vs. ExPASy TrEMBL
Match: A0A1S3BJW4 (uncharacterized protein LOC103490838 OS=Cucumis melo OX=3656 GN=LOC103490838 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.1e-78
Identity = 180/203 (88.67%), Postives = 192/203 (94.58%), Query Frame = 0


Query: 1   MRH-SKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPRRNEKPITEPASKSLVLGRVKDF 60
           MRH SKDLL+LERKDLS+SSLESSLLVCKKNSTSKEP RNEKPITEPASKSLVLGRV+DF
Sbjct: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNEKPITEPASKSLVLGRVQDF 60

Query: 61  LGVISEANKKLQMDAKDNAEKYDIEALDGNESKVIELDLMLGIADLHTPEAVAAAESAII 120
           LGVISEANKKLQMD+K+NA+KYDIEALDGNES+VI+LDLMLGIADLHTPEAVAAAESAII
Sbjct: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNQPVIPLTCSSSSESESEESSDDSITSNDNNDDNEKSDDQNTDHSNRSSVKLKRSNSRK 180
           GN PVIPLTC SSSESESEESSDDSITS+ +N+DNEKSDDQNTD SNR SVKLKRSNSRK
Sbjct: 121 GNHPVIPLTC-SSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRK 180

Query: 181 TSCRSKSKGKSKSEKRPKILELS 203
            SCRSKSKGK KS+KRPKI  LS
Sbjct: 181 ASCRSKSKGKGKSKKRPKIQVLS 202

[Close]

BLAST of Bhi11G000072 vs. ExPASy TrEMBL
Match: A0A6J1KZJ8 (uncharacterized protein LOC111498503 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498503 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.3e-74
Identity = 174/206 (84.47%), Postives = 187/206 (90.78%), Query Frame = 0


Query: 1   MRH-SKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPRRNEKPITEPASKSLVLGRVKDF 60
           MRH SKDLL LERKDL SSSLESSLLVCKKNSTSKEP RNEKPITEPA KS VLGRVKDF
Sbjct: 1   MRHASKDLLCLERKDLPSSSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 60

Query: 61  LGVISEANKKLQMDAKDNAEKYDIEALDGNESKVIELDLMLGIADLHTPEAVAAAESAII 120
           LGV+SEANKKLQ+DAKD+AEKYDIEAL+GNES+VIELDLMLGIADLHTPEAVAAAESAII
Sbjct: 61  LGVLSEANKKLQLDAKDDAEKYDIEALNGNESEVIELDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNQPVIPLTC---SSSSESESEESSDDSITSNDNNDDNEKSDDQNTDHSNRSSVKLKRSN 180
           GNQPVIPL C   SSSSESESEESSDDSITS++N++DNEKSD QNTD  NR SVKLKRS 
Sbjct: 121 GNQPVIPLNCSSSSSSSESESEESSDDSITSDNNDNDNEKSDTQNTDRGNRLSVKLKRSK 180

Query: 181 SRKTSCRSKSKGKSKSEKRPKILELS 203
           SR+ +CRS+S+ K KS KRPKILELS
Sbjct: 181 SRRANCRSESREKGKSNKRPKILELS 206

[Close]

BLAST of Bhi11G000072 vs. ExPASy TrEMBL
Match: A0A6J1F913 (uncharacterized protein LOC111443185 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443185 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.7e-74
Identity = 174/205 (84.88%), Postives = 186/205 (90.73%), Query Frame = 0


Query: 1   MRH-SKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPRRNEKPITEPASKSLVLGRVKDF 60
           MRH SKDLL LERKDL SSS ESSLLVCKKNSTSKEP RNEKPITEPA KS VLGRVKDF
Sbjct: 1   MRHASKDLLCLERKDLPSSSFESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 60

Query: 61  LGVISEANKKLQMDAKDNAEKYDIEALDGNESKVIELDLMLGIADLHTPEAVAAAESAII 120
           LGV+SEANKKLQ+DAKD+AEKYDIEAL+G+ES+VIELDLMLGIADLHTPEAVAAAESAII
Sbjct: 61  LGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNQPVIPLTCSSSS--ESESEESSDDSITSNDNNDDNEKSDDQNTDHSNRSSVKLKRSNS 180
           GNQPVI L CSSSS  ESESEESSDDSITS++N+DDNEKSD+QNTD  NR SVKLKR  S
Sbjct: 121 GNQPVIALNCSSSSSGESESEESSDDSITSDNNDDDNEKSDNQNTDRGNRLSVKLKRLKS 180

Query: 181 RKTSCRSKSKGKSKSEKRPKILELS 203
           RKT+CRS+SK K KS KRPKILELS
Sbjct: 181 RKTNCRSESKEKGKSNKRPKILELS 205

The following BLAST results are available for this feature:

BLAST of Bhi11G000072 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71430.1	4.5e-24	53.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

BLAST of Bhi11G000072 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi11G000072 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903017.1	6.6e-94	100.00	uncharacterized protein LOC120089721 [Benincasa hispida] >XP_038903019.1 unchara...	[more]
XP_004147238.2	5.4e-80	90.15	uncharacterized protein LOC101206707 isoform X2 [Cucumis sativus]	[more]
XP_008448773.1	2.3e-78	88.67	PREDICTED: uncharacterized protein LOC103490838 [Cucumis melo] >KAA0041045.1 E3 ...	[more]
XP_011650372.1	3.0e-78	88.41	uncharacterized protein LOC101206707 isoform X1 [Cucumis sativus] >KGN55834.2 hy...	[more]
XP_023005549.1	2.6e-74	84.47	uncharacterized protein LOC111498503 isoform X1 [Cucurbita maxima]	[more]

BLAST of Bhi11G000072 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L448	2.6e-80	90.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017130 PE=4 SV=1	[more]
A0A5D3CJH5	1.1e-78	88.67	E3 ubiquitin-protein ligase RNF34 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BJW4	1.1e-78	88.67	uncharacterized protein LOC103490838 OS=Cucumis melo OX=3656 GN=LOC103490838 PE=...	[more]
A0A6J1KZJ8	1.3e-74	84.47	uncharacterized protein LOC111498503 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1F913	3.7e-74	84.88	uncharacterized protein LOC111443185 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027921	NOP protein chaperone 1	PFAM	PF15370	DUF4598	coord: 53..201 e-value: 2.2E-15 score: 57.1
IPR027921	NOP protein chaperone 1	PANTHER	PTHR28674	SIMILAR TO DNA SEGMENT, CHR 10, WAYNE STATE UNIVERSITY 102,-EXPRESSED	coord: 3..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M000072	Bhi11M000072	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000492	box C/D snoRNP assembly
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0062064	box C/D snoRNP complex binding