Bhi10G001656 (gene) Wax gourd (B227) v1

Overview


Name	Bhi10G001656
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr10: 51236836 .. 51237211 (-)
RNA-Seq Expression	Bhi10G001656
Synteny	Bhi10G001656

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGAAGGCCTACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAACAATGACGGTATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGAAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAG

mRNA sequence

ATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGAAGGCCTACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAACAATGACGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGAAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAG

Coding sequence (CDS)

ATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGAAGGCCTACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAACAATGACGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGAAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAG

Protein sequence

MGESLTEQCRVEVEGLRVVNFFSRRRNNDAAAVIQRMQALSGMIGRKASVGGFLSPPSNPRAQPWKAVETTKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDES

Homology

[Close]

BLAST of Bhi10G001656 vs. NCBI nr
Match: TKY46750.1 (Ycf68 protein [Spatholobus suberectus])

HSP 1 Score: 139.8 bits (351), Expect = 1.4e-29
Identity = 76/112 (67.86%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 1   MGESLTEQCRVEVEGLRVVNFFSRRRNNDAAAVIQRMQALSGMIGRKASVGGFLSPPSNP 60
           MGESLTEQCRVEVEGLRV+NFFSRRR+ND    I                         P
Sbjct: 1   MGESLTEQCRVEVEGLRVMNFFSRRRSNDVRRQI-------------------------P 60

Query: 61  RAQPWKAVETTKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDES 113
              P +AVETTKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDES
Sbjct: 61  GLNPGQAVETTKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDES 87

[Close]

BLAST of Bhi10G001656 vs. NCBI nr
Match: KAG9438797.1 (hypothetical protein H6P81_021277 [Aristolochia fimbriata])

HSP 1 Score: 137.9 bits (346), Expect = 5.4e-29
Identity = 70/82 (85.37%), Postives = 71/82 (86.59%), Query Frame = 0


Query: 31  AAVIQRMQALSGMIGRKASVGGFLSPPSNPRAQPWKAVETTKLEYGRGRGNFRWSGEMRR 90
           AAV QRMQALSGMIGRKASVGGF SPPSNPRAQPW      +  YGRGRGNFRWSGEM R
Sbjct: 5   AAVRQRMQALSGMIGRKASVGGFSSPPSNPRAQPWTGGGNYQAGYGRGRGNFRWSGEMCR 64

Query: 91  DRKEHQRRKHSAGPTLTLRDES 113
           DRKEHQRRKHSAGPTLTLRDES
Sbjct: 65  DRKEHQRRKHSAGPTLTLRDES 86

[Close]

BLAST of Bhi10G001656 vs. NCBI nr
Match: XP_040944804.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC107907897 [Gossypium hirsutum])

HSP 1 Score: 136.3 bits (342), Expect = 1.6e-28
Identity = 76/111 (68.47%), Postives = 81/111 (72.97%), Query Frame = 0


Query: 1   MGESLTEQCRVEVEGLRVVNFFSRRRNNDAAAVIQRMQALSGMIGRKASVGGFLSPPSNP 60
           MGESLTEQCRVEVEG RVVNFFSRRR+ND    I        ++ R+            P
Sbjct: 100 MGESLTEQCRVEVEGPRVVNFFSRRRSNDGIWGI-------SIVRRQI-----------P 159

Query: 61  RAQPWKAVETTKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDE 112
              P +AVETTKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDE
Sbjct: 160 GLNPGQAVETTKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDE 192

[Close]

BLAST of Bhi10G001656 vs. NCBI nr
Match: RYQ97005.1 (hypothetical protein Ahy_B08g092966 [Arachis hypogaea])

HSP 1 Score: 135.6 bits (340), Expect = 2.7e-28
Identity = 74/112 (66.07%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 1   MGESLTEQCRVEVEGLRVVNFFSRRRNNDAAAVIQRMQALSGMIGRKASVGGFLSPPSNP 60
           MGESLTEQCRVEVEGL+VVNFFSRRR+ND                               
Sbjct: 1   MGESLTEQCRVEVEGLQVVNFFSRRRSNDG------------------------------ 60

Query: 61  RAQPWKAVETTKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDES 113
              P +AVETTKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDES
Sbjct: 61  -LNPGQAVETTKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDES 81

[Close]

BLAST of Bhi10G001656 vs. NCBI nr
Match: KAF2312915.1 (hypothetical protein GH714_042427 [Hevea brasiliensis])

HSP 1 Score: 134.0 bits (336), Expect = 7.8e-28
Identity = 73/112 (65.18%), Postives = 76/112 (67.86%), Query Frame = 0


Query: 1   MGESLTEQCRVEVEGLRVVNFFSRRRNNDAAAVIQRMQALSGMIGRKASVGGFLSPPSNP 60
           MGESLTEQCRVEVEGLRVVNFFSR+R+ND                               
Sbjct: 32  MGESLTEQCRVEVEGLRVVNFFSRKRSNDG------------------------------ 91

Query: 61  RAQPWKAVETTKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDES 113
              P +AVET KLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDES
Sbjct: 92  -LNPGQAVETAKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDES 112

[Close]

BLAST of Bhi10G001656 vs. ExPASy TrEMBL
Match: A0A444Y510 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B08g092966 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.3e-28
Identity = 74/112 (66.07%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 1   MGESLTEQCRVEVEGLRVVNFFSRRRNNDAAAVIQRMQALSGMIGRKASVGGFLSPPSNP 60
           MGESLTEQCRVEVEGL+VVNFFSRRR+ND                               
Sbjct: 1   MGESLTEQCRVEVEGLQVVNFFSRRRSNDG------------------------------ 60

Query: 61  RAQPWKAVETTKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDES 113
              P +AVETTKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDES
Sbjct: 61  -LNPGQAVETTKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDES 81

[Close]

BLAST of Bhi10G001656 vs. ExPASy TrEMBL
Match: A0A6A6MK94 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_042427 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.8e-28
Identity = 73/112 (65.18%), Postives = 76/112 (67.86%), Query Frame = 0


Query: 1   MGESLTEQCRVEVEGLRVVNFFSRRRNNDAAAVIQRMQALSGMIGRKASVGGFLSPPSNP 60
           MGESLTEQCRVEVEGLRVVNFFSR+R+ND                               
Sbjct: 32  MGESLTEQCRVEVEGLRVVNFFSRKRSNDG------------------------------ 91

Query: 61  RAQPWKAVETTKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDES 113
              P +AVET KLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDES
Sbjct: 92  -LNPGQAVETAKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDES 112

[Close]

BLAST of Bhi10G001656 vs. ExPASy TrEMBL
Match: A0A6N2KHV9 (Uncharacterized protein ycf68 OS=Salix viminalis OX=40686 GN=SVIM_LOCUS90436 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 9.3e-27
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 1   MGESLTEQCRVEVEGLRVVNFFSRRRNNDAAAVIQRMQALSGMIGRKASVGGFLSPPSNP 60
           MGESLTEQCRVEVEGLRVVNFFS+RR+NDAAAVIQRMQALSGMIGRKASVGGFLSPPSNP
Sbjct: 83  MGESLTEQCRVEVEGLRVVNFFSQRRSNDAAAVIQRMQALSGMIGRKASVGGFLSPPSNP 142

Query: 61  RAQPW 66
           RAQPW
Sbjct: 143 RAQPW 147

[Close]

BLAST of Bhi10G001656 vs. ExPASy TrEMBL
Match: A0A5D3BBA8 (Uncharacterized protein ycf68 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold371G00380 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.9e-24
Identity = 66/111 (59.46%), Postives = 73/111 (65.77%), Query Frame = 0


Query: 1   MGESLTEQCRVEVEGLRVVNFFSRRRNNDAAAVIQRMQALSGMIGRKASVGGFLSPPSNP 60
           MGESL EQC ++VEGLRV+NFFSRRR+ND    I                         P
Sbjct: 1   MGESLLEQCHLKVEGLRVMNFFSRRRSNDVRRQI-------------------------P 60

Query: 61  RAQPWKAVETTKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDE 112
              P +AVETTKLEYGRGRGNFRWSG+M RD+KEHQRRKHS  PTLTLRDE
Sbjct: 61  GLNPGQAVETTKLEYGRGRGNFRWSGKMHRDQKEHQRRKHSVEPTLTLRDE 86

[Close]

BLAST of Bhi10G001656 vs. ExPASy TrEMBL
Match: A0A2P5XJ56 (Uncharacterized protein ycf68 OS=Gossypium barbadense OX=3634 GN=GOBAR_AA17289 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 5.6e-24
Identity = 61/65 (93.85%), Postives = 62/65 (95.38%), Query Frame = 0


Query: 1  MGESLTEQCRVEVEGLRVVNFFSRRRNNDAAAVIQRMQALSGMIGRKASVGGFLSPPSNP 60
          MGESLTEQCRVEVEG RVVNFFSRRR+ND A VIQRMQALSGMIGRKASVGGFLSPPSNP
Sbjct: 16 MGESLTEQCRVEVEGPRVVNFFSRRRSND-APVIQRMQALSGMIGRKASVGGFLSPPSNP 75

Query: 61 RAQPW 66
          RAQPW
Sbjct: 76 RAQPW 79

The following BLAST results are available for this feature:

BLAST of Bhi10G001656 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi10G001656 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi10G001656 vs. NCBI nr


Match Name	E-value	Identity	Description
TKY46750.1	1.4e-29	67.86	Ycf68 protein [Spatholobus suberectus]	[more]
KAG9438797.1	5.4e-29	85.37	hypothetical protein H6P81_021277 [Aristolochia fimbriata]	[more]
XP_040944804.1	1.6e-28	68.47	LOW QUALITY PROTEIN: uncharacterized protein LOC107907897 [Gossypium hirsutum]	[more]
RYQ97005.1	2.7e-28	66.07	hypothetical protein Ahy_B08g092966 [Arachis hypogaea]	[more]
KAF2312915.1	7.8e-28	65.18	hypothetical protein GH714_042427 [Hevea brasiliensis]	[more]

BLAST of Bhi10G001656 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A444Y510	1.3e-28	66.07	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B08g092966 PE=4 SV=1	[more]
A0A6A6MK94	3.8e-28	65.18	Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_042427 PE=4 SV=1	[more]
A0A6N2KHV9	9.3e-27	96.92	Uncharacterized protein ycf68 OS=Salix viminalis OX=40686 GN=SVIM_LOCUS90436 PE=...	[more]
A0A5D3BBA8	1.9e-24	59.46	Uncharacterized protein ycf68 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A2P5XJ56	5.6e-24	93.85	Uncharacterized protein ycf68 OS=Gossypium barbadense OX=3634 GN=GOBAR_AA17289 P...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M001656	Bhi10M001656	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0018298	protein-chromophore linkage
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0043229	intracellular organelle
cellular_component	GO:0009521	photosystem
molecular_function	GO:0016168	chlorophyll binding