Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACCAAATTTCCTATCCAGTATTAAGCGACATACTCATCCTCTGATTTGGATTGCCGGCATAATCTGCGCCACCATAGCTCTTGCAGTGATAATCGCAGGCATCGTCATCTTCATCGGCTATGTGACGATCCGCCCTAGGGTACCTTCAATCAGTGTAACCGACGGACATCTCGACAGAATCCGAAGCAGCAGAACCGGATTGCTTGAAGTCCAGATGAAGATCGTCGTCCGAGCCGAGAATCAAAATGCTAGGGCACACGCAAGCTTTTCACAGACCGATTTCGTCCTGCTTTTCGACGGCATAGAAATCGCATCACTGGTGGCTCACCGGCCGTTCAAAGTGAACAAAATGAGTTACCTAGATTTGCATTTCTTAGTGGAATCATCAGCGATTCCGCTCAATCCAACGCAAATGCAGCATCTTAGCTGGTCGCTGAAGAGAGATTTGATGCAATTCGATCTGAAAGGAAGCTCGAGAACTCGATGGCGAGTTGGAATTTTGGGACCCCTCAAGTTTTGGTGCCGTTTGAACTGTCACCTCAGGTTTTACCCGCGTAATGGAAGCTACATCCCTGCGCCTTGTTCTTCAAGGCAGAAGTAA
mRNA sequence
ATGCCACCAAATTTCCTATCCAGTATTAAGCGACATACTCATCCTCTGATTTGGATTGCCGGCATAATCTGCGCCACCATAGCTCTTGCAGTGATAATCGCAGGCATCGTCATCTTCATCGGCTATGTGACGATCCGCCCTAGGGTACCTTCAATCAGTGTAACCGACGGACATCTCGACAGAATCCGAAGCAGCAGAACCGGATTGCTTGAAGTCCAGATGAAGATCGTCGTCCGAGCCGAGAATCAAAATGCTAGGGCACACGCAAGCTTTTCACAGACCGATTTCGTCCTGCTTTTCGACGGCATAGAAATCGCATCACTGGTGGCTCACCGGCCGTTCAAAGTGAACAAAATGAGTTACCTAGATTTGCATTTCTTAGTGGAATCATCAGCGATTCCGCTCAATCCAACGCAAATGCAGCATCTTAGCTGGTCGCTGAAGAGAGATTTGATGCAATTCGATCTGAAAGGAAGCTCGAGAACTCGATGGCGAGTTGGAATTTTGGGACCCCTCAAGTTTTGGTGCCGTTTGAACTGTCACCTCAGGTTTTACCCGCGTAATGGAAGCTACATCCCTGCGCCTTGTTCTTCAAGGCAGAAGTAA
Coding sequence (CDS)
ATGCCACCAAATTTCCTATCCAGTATTAAGCGACATACTCATCCTCTGATTTGGATTGCCGGCATAATCTGCGCCACCATAGCTCTTGCAGTGATAATCGCAGGCATCGTCATCTTCATCGGCTATGTGACGATCCGCCCTAGGGTACCTTCAATCAGTGTAACCGACGGACATCTCGACAGAATCCGAAGCAGCAGAACCGGATTGCTTGAAGTCCAGATGAAGATCGTCGTCCGAGCCGAGAATCAAAATGCTAGGGCACACGCAAGCTTTTCACAGACCGATTTCGTCCTGCTTTTCGACGGCATAGAAATCGCATCACTGGTGGCTCACCGGCCGTTCAAAGTGAACAAAATGAGTTACCTAGATTTGCATTTCTTAGTGGAATCATCAGCGATTCCGCTCAATCCAACGCAAATGCAGCATCTTAGCTGGTCGCTGAAGAGAGATTTGATGCAATTCGATCTGAAAGGAAGCTCGAGAACTCGATGGCGAGTTGGAATTTTGGGACCCCTCAAGTTTTGGTGCCGTTTGAACTGTCACCTCAGGTTTTACCCGCGTAATGGAAGCTACATCCCTGCGCCTTGTTCTTCAAGGCAGAAGTAA
Protein sequence
MPPNFLSSIKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSQTDFVLLFDGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLSWSLKRDLMQFDLKGSSRTRWRVGILGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRQK
Homology
BLAST of Bhi09G002293 vs. TAIR 10
Match:
AT5G45320.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 253 Blast hits to 253 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 253; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 202.2 bits (513), Expect = 3.9e-52
Identity = 101/192 (52.60%), Postives = 136/192 (70.83%), Query Frame = 0
Query: 11 RH-THPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLDRIRSSRTGL 70
RH T P IW A IICA I++ VI+ GI++F+GY+ I PRVP ISV D HLD ++ G+
Sbjct: 7 RHGTSPFIWCAAIICAIISIVVIVGGIIVFVGYLVIHPRVPIISVADAHLDFLKYDIVGV 66
Query: 71 LEVQMKIVVRAENQNARAHASFSQTDFVLLFDGIEIASLVAHRPFKVNKMSYLDLHFLVE 130
L+ Q+ IV+R EN NA+AHA F +T+F L ++G IA L A F+V K + L +LV+
Sbjct: 67 LQTQLTIVIRVENDNAKAHALFDETEFKLSYEGKPIAILKAPE-FEVVKEKSMFLPYLVQ 126
Query: 131 SSAIPLNPTQMQHLSWSLKRDLMQFDLKGSSRTRWRVGILGPLKFWCRLNCHLRFYPRNG 190
S IPLNPT MQ + +++K+D++ F+LKG SRTRWRVG LG +KF C L+C LRF P +
Sbjct: 127 SYPIPLNPTMMQAVDYAVKKDVITFELKGGSRTRWRVGPLGSVKFECNLSCQLRFRPSDH 186
Query: 191 SYIPAPCSSRQK 202
SYIP+PC+S K
Sbjct: 187 SYIPSPCTSAHK 197
BLAST of Bhi09G002293 vs. TAIR 10
Match:
AT1G13050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits to 510 proteins in 88 species: Archae - 0; Bacteria - 23; Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other Eukaryotes - 29 (source: NCBI BLink). )
HSP 1 Score: 62.8 bits (151), Expect = 3.7e-10
Identity = 47/192 (24.48%), Postives = 85/192 (44.27%), Query Frame = 0
Query: 11 RHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLDRIRSSRTGLL 70
+ T P+ A I CA + + +I++G+++ + Y+ RPR P ++ L+ +L
Sbjct: 128 KRTKPMTLPATICCAILLIVLILSGLILLLVYLANRPRSPYFDISAATLNTANLDMGYVL 187
Query: 71 EVQMKIVVRAENQNARAHASFSQTDFVLLFDGIEIASLVAH-RPFKVNKMSYLDLHFLVE 130
+ +VV N + ++ FS F L F IA+ H PF V K + F +
Sbjct: 188 NGDLAVVVNFTNPSKKSSVDFSYVMFELYFYNTLIAT--EHIEPFIVPKGMSMFTSFHLV 247
Query: 131 SSAIPLNPTQMQHLSWSLKRDLMQFDLKGSSRTRWRVGILGPLKFWCRLNCHLRF-YPRN 190
SS + + Q Q L L + +L+G+ R +G L +W C + P
Sbjct: 248 SSQVQIQMIQSQDLQLQLGTGPVLLNLRGTFHARSNLGSLMRYSYWLHTQCSISLNTPPA 307
Query: 191 GSYIPAPCSSRQ 201
G+ C++++
Sbjct: 308 GTMRARRCNTKR 317
BLAST of Bhi09G002293 vs. TAIR 10
Match:
AT1G13050.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 260 Blast hits to 259 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 260; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 59.3 bits (142), Expect = 4.1e-09
Identity = 45/183 (24.59%), Postives = 81/183 (44.26%), Query Frame = 0
Query: 20 AGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLDRIRSSRTGLLEVQMKIVVR 79
A I CA + + +I++G+++ + Y+ RPR P ++ L+ +L + +VV
Sbjct: 5 ATICCAILLIVLILSGLILLLVYLANRPRSPYFDISAATLNTANLDMGYVLNGDLAVVVN 64
Query: 80 AENQNARAHASFSQTDFVLLFDGIEIASLVAH-RPFKVNKMSYLDLHFLVESSAIPLNPT 139
N + ++ FS F L F IA+ H PF V K + F + SS + +
Sbjct: 65 FTNPSKKSSVDFSYVMFELYFYNTLIAT--EHIEPFIVPKGMSMFTSFHLVSSQVQIQMI 124
Query: 140 QMQHLSWSLKRDLMQFDLKGSSRTRWRVGILGPLKFWCRLNCHLRF-YPRNGSYIPAPCS 199
Q Q L L + +L+G+ R +G L +W C + P G+ C+
Sbjct: 125 QSQDLQLQLGTGPVLLNLRGTFHARSNLGSLMRYSYWLHTQCSISLNTPPAGTMRARRCN 184
Query: 200 SRQ 201
+++
Sbjct: 185 TKR 185
BLAST of Bhi09G002293 vs. ExPASy TrEMBL
Match:
A0A6J1FL61 (uncharacterized protein LOC111446247 OS=Cucurbita moschata OX=3662 GN=LOC111446247 PE=4 SV=1)
HSP 1 Score: 395.6 bits (1015), Expect = 1.2e-106
Identity = 192/201 (95.52%), Postives = 197/201 (98.01%), Query Frame = 0
Query: 1 MPPNFLSSIKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLD 60
MPPNFLSS+KRHTHPLIWIAGIICA IALAVIIAGIVIFIGYVTIRPRVP+ISVTDGHLD
Sbjct: 1 MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLD 60
Query: 61 RIRSSRTGLLEVQMKIVVRAENQNARAHASFSQTDFVLLFDGIEIASLVAHRPFKVNKMS 120
RIRSSRTGLLEVQMKIVVRAENQNARAHASFS TDFVL+FDGIEIASLVAHRPFKVNKMS
Sbjct: 61 RIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVAHRPFKVNKMS 120
Query: 121 YLDLHFLVESSAIPLNPTQMQHLSWSLKRDLMQFDLKGSSRTRWRVGILGPLKFWCRLNC 180
YLDLHFLVESSAIPLNPTQMQHL WSLKR+LMQFDLKGSSRTRWRVG+LGPLKFWCRLNC
Sbjct: 121 YLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNC 180
Query: 181 HLRFYPRNGSYIPAPCSSRQK 202
HLRFYPRNGSYIPAPCSSR K
Sbjct: 181 HLRFYPRNGSYIPAPCSSRDK 201
BLAST of Bhi09G002293 vs. ExPASy TrEMBL
Match:
A0A5D3BSN8 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00630 PE=4 SV=1)
HSP 1 Score: 388.7 bits (997), Expect = 1.5e-104
Identity = 190/201 (94.53%), Postives = 197/201 (98.01%), Query Frame = 0
Query: 1 MPPNFLSSIKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLD 60
MPPNFLSS+KRHTHPLIWIAGIICATIALAVI+AGIVIFIGYVTIRPRVPSISVTDGHLD
Sbjct: 1 MPPNFLSSLKRHTHPLIWIAGIICATIALAVIVAGIVIFIGYVTIRPRVPSISVTDGHLD 60
Query: 61 RIRSSRTGLLEVQMKIVVRAENQNARAHASFSQTDFVLLFDGIEIASLVAHRPFKVNKMS 120
RIRSSRTGLLEVQMKIVVRAENQNA+AHASFS+TDFVLLFDGIEIASLVAHRPFKVNKMS
Sbjct: 61 RIRSSRTGLLEVQMKIVVRAENQNAKAHASFSKTDFVLLFDGIEIASLVAHRPFKVNKMS 120
Query: 121 YLDLHFLVESSAIPLNPTQMQHLSWSLKRDLMQFDLKGSSRTRWRVGILGPLKFWCRLNC 180
YLDLHFLVESSAIPL+ TQMQHLSWSLKR+L+QFDLKGSSRTRWRVGILGPLKFWCRLNC
Sbjct: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRNLIQFDLKGSSRTRWRVGILGPLKFWCRLNC 180
Query: 181 HLRFYPRNGSYIPAPCSSRQK 202
HLRF PRNGSYIP PCSS QK
Sbjct: 181 HLRFLPRNGSYIPMPCSSNQK 201
BLAST of Bhi09G002293 vs. ExPASy TrEMBL
Match:
A0A0A0L1I9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G242860 PE=4 SV=1)
HSP 1 Score: 387.1 bits (993), Expect = 4.4e-104
Identity = 187/201 (93.03%), Postives = 198/201 (98.51%), Query Frame = 0
Query: 1 MPPNFLSSIKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLD 60
MPPNFLSS+KRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHL+
Sbjct: 1 MPPNFLSSLKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLE 60
Query: 61 RIRSSRTGLLEVQMKIVVRAENQNARAHASFSQTDFVLLFDGIEIASLVAHRPFKVNKMS 120
RIRSSRTGLLEVQMKIVVRAENQNA+AHA FS+TDFVLLFDGIEIASLVAHRPFKVNKM+
Sbjct: 61 RIRSSRTGLLEVQMKIVVRAENQNAKAHAGFSKTDFVLLFDGIEIASLVAHRPFKVNKMN 120
Query: 121 YLDLHFLVESSAIPLNPTQMQHLSWSLKRDLMQFDLKGSSRTRWRVGILGPLKFWCRLNC 180
YLDLHFLVESSAIPL+ TQMQHLSWSLKRDL+QFDLKGSSRTRWRVG+LGPLKFWCRL+C
Sbjct: 121 YLDLHFLVESSAIPLDSTQMQHLSWSLKRDLIQFDLKGSSRTRWRVGVLGPLKFWCRLDC 180
Query: 181 HLRFYPRNGSYIPAPCSSRQK 202
HLRF+PRNGSYIP PCSS+QK
Sbjct: 181 HLRFFPRNGSYIPTPCSSKQK 201
BLAST of Bhi09G002293 vs. ExPASy TrEMBL
Match:
A0A6J1C199 (uncharacterized protein LOC111007456 OS=Momordica charantia OX=3673 GN=LOC111007456 PE=4 SV=1)
HSP 1 Score: 386.0 bits (990), Expect = 9.9e-104
Identity = 187/201 (93.03%), Postives = 196/201 (97.51%), Query Frame = 0
Query: 1 MPPNFLSSIKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLD 60
MPP FLSS+KRHTHPLIWIAGIICATIALAVII GIVIFIGYVTIRPRVPSISVTDGHLD
Sbjct: 1 MPPKFLSSLKRHTHPLIWIAGIICATIALAVIIGGIVIFIGYVTIRPRVPSISVTDGHLD 60
Query: 61 RIRSSRTGLLEVQMKIVVRAENQNARAHASFSQTDFVLLFDGIEIASLVAHRPFKVNKMS 120
RIRSSRTGLLEVQMKIVVRAENQNA+AHASFSQTDFVL+FDGIEIASLVA RPFKV+KMS
Sbjct: 61 RIRSSRTGLLEVQMKIVVRAENQNAKAHASFSQTDFVLIFDGIEIASLVARRPFKVSKMS 120
Query: 121 YLDLHFLVESSAIPLNPTQMQHLSWSLKRDLMQFDLKGSSRTRWRVGILGPLKFWCRLNC 180
YLDLHFLVESSAIPLNPTQM HLSWSLKR+LMQFDLKGSSRTRWRVG+LGPLKFWCRLNC
Sbjct: 121 YLDLHFLVESSAIPLNPTQMDHLSWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNC 180
Query: 181 HLRFYPRNGSYIPAPCSSRQK 202
HLRF+PRNGSY+PAPCSS+ K
Sbjct: 181 HLRFHPRNGSYVPAPCSSKGK 201
BLAST of Bhi09G002293 vs. ExPASy TrEMBL
Match:
A0A6J1FEV3 (uncharacterized protein LOC111443437 OS=Cucurbita moschata OX=3662 GN=LOC111443437 PE=4 SV=1)
HSP 1 Score: 379.8 bits (974), Expect = 7.1e-102
Identity = 185/201 (92.04%), Postives = 192/201 (95.52%), Query Frame = 0
Query: 1 MPPNFLSSIKRHTHPLIWIAGIICATIALAVIIAGIVIFIGYVTIRPRVPSISVTDGHLD 60
MPPNFLSS+KRHTHPLIWIAGIICATIA+AVIIAGIVIFIGYVTIRP VPSISVTDGHLD
Sbjct: 13 MPPNFLSSLKRHTHPLIWIAGIICATIAVAVIIAGIVIFIGYVTIRPTVPSISVTDGHLD 72
Query: 61 RIRSSRTGLLEVQMKIVVRAENQNARAHASFSQTDFVLLFDGIEIASLVAHRPFKVNKMS 120
RIR+SR GLLEVQMKIVVRAENQNARA ASFS TDFVL+FDGIEIASLVAHRPFKVNKMS
Sbjct: 73 RIRNSRIGLLEVQMKIVVRAENQNARAQASFSHTDFVLIFDGIEIASLVAHRPFKVNKMS 132
Query: 121 YLDLHFLVESSAIPLNPTQMQHLSWSLKRDLMQFDLKGSSRTRWRVGILGPLKFWCRLNC 180
YLDLHFLVESSAIPLNP QMQHLSWSL R+LMQFDLKGSSRTRWRVG+LGPLKFWC LNC
Sbjct: 133 YLDLHFLVESSAIPLNPMQMQHLSWSLNRNLMQFDLKGSSRTRWRVGVLGPLKFWCHLNC 192
Query: 181 HLRFYPRNGSYIPAPCSSRQK 202
LRFYPRNGSYIPAPCSS+ K
Sbjct: 193 RLRFYPRNGSYIPAPCSSKDK 213
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
AT5G45320.1 | 3.9e-52 | 52.60 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... | [more] |
AT1G13050.1 | 3.7e-10 | 24.48 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT1G13050.2 | 4.1e-09 | 24.59 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1FL61 | 1.2e-106 | 95.52 | uncharacterized protein LOC111446247 OS=Cucurbita moschata OX=3662 GN=LOC1114462... | [more] |
A0A5D3BSN8 | 1.5e-104 | 94.53 | NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... | [more] |
A0A0A0L1I9 | 4.4e-104 | 93.03 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G242860 PE=4 SV=1 | [more] |
A0A6J1C199 | 9.9e-104 | 93.03 | uncharacterized protein LOC111007456 OS=Momordica charantia OX=3673 GN=LOC111007... | [more] |
A0A6J1FEV3 | 7.1e-102 | 92.04 | uncharacterized protein LOC111443437 OS=Cucurbita moschata OX=3662 GN=LOC1114434... | [more] |