Bhi09G000413 (gene) Wax gourd (B227) v1

Overview
NameBhi09G000413
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionPlant protein of unknown function (DUF247)
Locationchr9: 10751597 .. 10751803 (-)
RNA-Seq ExpressionBhi09G000413
SyntenyBhi09G000413
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCATTGATCCTGATTCCTATACTCCACAGGAAGTGGCAATTGGTCCATACCATCACTGGCGCCAAGAGCTGTATGAGATGGAGAGGTACAAGATTGCTGCAGCCAAAAGAGCTCAAAAACAGCTCCAAAGCCTCAAGTTTCACGATCTCGTTGAGAAGTTGACCAAGTACGAGCAAAAGACCCGGGCGTGCTACCACAGATAG

mRNA sequence

ATGGTCATTGATCCTGATTCCTATACTCCACAGGAAGTGGCAATTGGTCCATACCATCACTGGCGCCAAGAGCTGTATGAGATGGAGAGGTACAAGATTGCTGCAGCCAAAAGAGCTCAAAAACAGCTCCAAAGCCTCAAGTTTCACGATCTCGTTGAGAAGTTGACCAAGTACGAGCAAAAGACCCGGGCGTGCTACCACAGATAG

Coding sequence (CDS)

ATGGTCATTGATCCTGATTCCTATACTCCACAGGAAGTGGCAATTGGTCCATACCATCACTGGCGCCAAGAGCTGTATGAGATGGAGAGGTACAAGATTGCTGCAGCCAAAAGAGCTCAAAAACAGCTCCAAAGCCTCAAGTTTCACGATCTCGTTGAGAAGTTGACCAAGTACGAGCAAAAGACCCGGGCGTGCTACCACAGATAG

Protein sequence

MVIDPDSYTPQEVAIGPYHHWRQELYEMERYKIAAAKRAQKQLQSLKFHDLVEKLTKYEQKTRACYHR
Homology
BLAST of Bhi09G000413 vs. TAIR 10
Match: AT3G02645.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 82.4 bits (202), Expect = 1.5e-16
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 0

Query: 1   MVIDPDSYTPQEVAIGPYHHWRQELYEMERYKIAAAKRAQKQLQSLKFHDLVEKLTKYEQ 60
           M   PDSYTP  V+IGPYH  + EL+EMERYK+  A++ + Q  S +FHDLVEKL   E 
Sbjct: 53  MCSHPDSYTPHRVSIGPYHCLKPELHEMERYKLMIARKIRNQYNSFRFHDLVEKLQSMEI 112

Query: 61  KTRACYHR 69
           K RACYH+
Sbjct: 113 KIRACYHK 120

BLAST of Bhi09G000413 vs. TAIR 10
Match: AT3G50120.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 49.7 bits (117), Expect = 1.1e-06
Identity = 26/64 (40.62%), Postives = 40/64 (62.50%), Query Frame = 0

Query: 4   DPDSYTPQEVAIGPYHHWRQELYEMERYKIAAAKRAQKQL-QSLKFHDLVEKLTKYEQKT 63
           D  SY PQ V++GPYHH ++ L  M+R+K  A  R  K+  Q +K +  ++ + + E+K 
Sbjct: 116 DNKSYFPQTVSLGPYHHGKKRLRSMDRHKWRAVNRVLKRTNQGIKMY--IDAMRELEEKA 175

Query: 64  RACY 67
           RACY
Sbjct: 176 RACY 177

BLAST of Bhi09G000413 vs. TAIR 10
Match: AT3G50170.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 48.5 bits (114), Expect = 2.4e-06
Identity = 25/63 (39.68%), Postives = 37/63 (58.73%), Query Frame = 0

Query: 4   DPDSYTPQEVAIGPYHHWRQELYEMERYKIAAAKRAQKQLQSLKFHDLVEKLTKYEQKTR 63
           D  SY PQ V++GPYHH ++ L  MER+K  A  +  K+L+  +       + + E+K R
Sbjct: 126 DKKSYFPQTVSLGPYHHGKKRLRPMERHKWRALNKVLKRLKQ-RIEMYTNAMRELEEKAR 185

Query: 64  ACY 67
           ACY
Sbjct: 186 ACY 187

BLAST of Bhi09G000413 vs. TAIR 10
Match: AT3G50170.2 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 48.5 bits (114), Expect = 2.4e-06
Identity = 25/63 (39.68%), Postives = 37/63 (58.73%), Query Frame = 0

Query: 4   DPDSYTPQEVAIGPYHHWRQELYEMERYKIAAAKRAQKQLQSLKFHDLVEKLTKYEQKTR 63
           D  SY PQ V++GPYHH ++ L  MER+K  A  +  K+L+  +       + + E+K R
Sbjct: 126 DKKSYFPQTVSLGPYHHGKKRLRPMERHKWRALNKVLKRLKQ-RIEMYTNAMRELEEKAR 185

Query: 64  ACY 67
           ACY
Sbjct: 186 ACY 187

BLAST of Bhi09G000413 vs. TAIR 10
Match: AT3G50160.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 46.6 bits (109), Expect = 9.3e-06
Identity = 27/66 (40.91%), Postives = 38/66 (57.58%), Query Frame = 0

Query: 4   DPDSYTPQEVAIGPYHHWRQELYEMERYKIAAAKRAQKQLQSLKFHDL---VEKLTKYEQ 63
           D  SY PQ V+IGPYHH  + L  MER+K     RA   + +   HD+   ++ + + E+
Sbjct: 117 DTKSYMPQIVSIGPYHHGHKHLMPMERHK----WRAVNMVMARAKHDIEMYIDAMKELEE 176

Query: 64  KTRACY 67
           K RACY
Sbjct: 177 KARACY 178

BLAST of Bhi09G000413 vs. ExPASy Swiss-Prot
Match: P0C897 (Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana OX=3702 GN=At3g02645 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.1e-15
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 0

Query: 1   MVIDPDSYTPQEVAIGPYHHWRQELYEMERYKIAAAKRAQKQLQSLKFHDLVEKLTKYEQ 60
           M   PDSYTP  V+IGPYH  + EL+EMERYK+  A++ + Q  S +FHDLVEKL   E 
Sbjct: 53  MCSHPDSYTPHRVSIGPYHCLKPELHEMERYKLMIARKIRNQYNSFRFHDLVEKLQSMEI 112

Query: 61  KTRACYHR 69
           K RACYH+
Sbjct: 113 KIRACYHK 120

BLAST of Bhi09G000413 vs. ExPASy TrEMBL
Match: A0A1S3CDL4 (putative UPF0481 protein At3g02645 OS=Cucumis melo OX=3656 GN=LOC103499824 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 9.3e-30
Identity = 66/68 (97.06%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1   MVIDPDSYTPQEVAIGPYHHWRQELYEMERYKIAAAKRAQKQLQSLKFHDLVEKLTKYEQ 60
           MVIDPDSYTPQEVAIGPYHHWRQELYEMERYKIAAAKRAQKQLQSLKFHDLVEKLTK+EQ
Sbjct: 60  MVIDPDSYTPQEVAIGPYHHWRQELYEMERYKIAAAKRAQKQLQSLKFHDLVEKLTKHEQ 119

Query: 61  KTRACYHR 69
           KTRACYH+
Sbjct: 120 KTRACYHK 127

BLAST of Bhi09G000413 vs. ExPASy TrEMBL
Match: A0A5A7UU59 (Putative UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G001980 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 9.3e-30
Identity = 66/68 (97.06%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1   MVIDPDSYTPQEVAIGPYHHWRQELYEMERYKIAAAKRAQKQLQSLKFHDLVEKLTKYEQ 60
           MVIDPDSYTPQEVAIGPYHHWRQELYEMERYKIAAAKRAQKQLQSLKFHDLVEKLTK+EQ
Sbjct: 60  MVIDPDSYTPQEVAIGPYHHWRQELYEMERYKIAAAKRAQKQLQSLKFHDLVEKLTKHEQ 119

Query: 61  KTRACYHR 69
           KTRACYH+
Sbjct: 120 KTRACYHK 127

BLAST of Bhi09G000413 vs. ExPASy TrEMBL
Match: A0A0A0KA21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432180 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.6e-29
Identity = 65/68 (95.59%), Postives = 67/68 (98.53%), Query Frame = 0

Query: 1   MVIDPDSYTPQEVAIGPYHHWRQELYEMERYKIAAAKRAQKQLQSLKFHDLVEKLTKYEQ 60
           MVIDPDSY PQEVAIGPYHHWRQELYEMERYKIAAAKRAQKQLQSLKFHDLVEKLTK+EQ
Sbjct: 60  MVIDPDSYIPQEVAIGPYHHWRQELYEMERYKIAAAKRAQKQLQSLKFHDLVEKLTKHEQ 119

Query: 61  KTRACYHR 69
           KTRACYH+
Sbjct: 120 KTRACYHK 127

BLAST of Bhi09G000413 vs. ExPASy TrEMBL
Match: A0A6J1D655 (putative UPF0481 protein At3g02645 OS=Momordica charantia OX=3673 GN=LOC111017403 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.8e-26
Identity = 59/68 (86.76%), Postives = 65/68 (95.59%), Query Frame = 0

Query: 1  MVIDPDSYTPQEVAIGPYHHWRQELYEMERYKIAAAKRAQKQLQSLKFHDLVEKLTKYEQ 60
          M IDPDSYTPQEVAIGPYH+WRQELYEMERYKIAAAKRAQKQLQS KFH++VEKLTKYE+
Sbjct: 1  MAIDPDSYTPQEVAIGPYHYWRQELYEMERYKIAAAKRAQKQLQSPKFHNIVEKLTKYER 60

Query: 61 KTRACYHR 69
          K R+CYH+
Sbjct: 61 KIRSCYHK 68

BLAST of Bhi09G000413 vs. ExPASy TrEMBL
Match: A0A0A0K8N9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432200 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.8e-25
Identity = 59/68 (86.76%), Postives = 64/68 (94.12%), Query Frame = 0

Query: 1   MVIDPDSYTPQEVAIGPYHHWRQELYEMERYKIAAAKRAQKQLQSLKFHDLVEKLTKYEQ 60
           M IDPDSYTPQEVAIGPYHHWRQELY MERYKIAAA++AQKQLQSLKFH+LVEKL KYE+
Sbjct: 59  MAIDPDSYTPQEVAIGPYHHWRQELYVMERYKIAAARKAQKQLQSLKFHNLVEKLAKYER 118

Query: 61  KTRACYHR 69
           KTRA YH+
Sbjct: 119 KTRAFYHK 126

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT3G02645.11.5e-1657.35Plant protein of unknown function (DUF247) [more]
AT3G50120.11.1e-0640.63Plant protein of unknown function (DUF247) [more]
AT3G50170.12.4e-0639.68Plant protein of unknown function (DUF247) [more]
AT3G50170.22.4e-0639.68Plant protein of unknown function (DUF247) [more]
AT3G50160.19.3e-0640.91Plant protein of unknown function (DUF247) [more]
Match NameE-valueIdentityDescription
P0C8972.1e-1557.35Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana OX=3702 GN=At3g02645 ... [more]
Match NameE-valueIdentityDescription
A0A1S3CDL49.3e-3097.06putative UPF0481 protein At3g02645 OS=Cucumis melo OX=3656 GN=LOC103499824 PE=4 ... [more]
A0A5A7UU599.3e-3097.06Putative UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... [more]
A0A0A0KA214.6e-2995.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432180 PE=4 SV=1[more]
A0A6J1D6554.8e-2686.76putative UPF0481 protein At3g02645 OS=Momordica charantia OX=3673 GN=LOC11101740... [more]
A0A0A0K8N91.8e-2586.76Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432200 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004158Protein of unknown function DUF247, plantPFAMPF03140DUF247coord: 4..67
e-value: 1.9E-17
score: 63.6
IPR004158Protein of unknown function DUF247, plantPANTHERPTHR31549PROTEIN, PUTATIVE (DUF247)-RELATED-RELATEDcoord: 3..68
NoneNo IPR availablePANTHERPTHR31549:SF176UPF0481 PLANT-LIKE PROTEINcoord: 3..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M000413Bhi09M000413mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane