Bhi08G000277 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G000277
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	BnaC09g30100D protein
Location	chr8: 11559233 .. 11559421 (+)
RNA-Seq Expression	Bhi08G000277
Synteny	Bhi08G000277

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGGACCTACGAGCCAAGGGACAGTCTCAGGTAGACAGTTTCTACGGGCCATAGGCCTCCCAAAATGTAACGGAGGCGTGCAAAGGTTTCCTCGAGCCAGGCGGAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCTACTCGTCGAGCAGGGACGAAAGTCGGCCTTAG

mRNA sequence

ATGTCAGGACCTACGAGCCAAGGGACAGTCTCAGGTAGACAGTTTCTACGGGCCATAGGCCTCCCAAAATGTAACGGAGGCGTGCAAAGGTTTCCTCGAGCCAGGCGGAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCTACTCGTCGAGCAGGGACGAAAGTCGGCCTTAG

Coding sequence (CDS)

ATGTCAGGACCTACGAGCCAAGGGACAGTCTCAGGTAGACAGTTTCTACGGGCCATAGGCCTCCCAAAATGTAACGGAGGCGTGCAAAGGTTTCCTCGAGCCAGGCGGAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCTACTCGTCGAGCAGGGACGAAAGTCGGCCTTAG

Protein sequence

MSGPTSQGTVSGRQFLRAIGLPKCNGGVQRFPRARRRLALECKGRRELDCKTYSSSRDESRP

Homology

[Close]

BLAST of Bhi08G000277 vs. ExPASy TrEMBL
Match: A0A498KQT9 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_037508 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 1   MSGPTSQGTVSGRQFLRAIGLPKCNGGVQRFPRARRRLALECKGRRELDCKTYSSSRDES 60
           +SGPT QGTVSGRQFL  +GLPK NGGVQRFPRARRRLALECKGRRELDCKT+ SSRDES
Sbjct: 93  VSGPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRDES 152

Query: 61  RP 63
           RP
Sbjct: 153 RP 154

[Close]

BLAST of Bhi08G000277 vs. ExPASy TrEMBL
Match: A0A498JQG0 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_006989 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.2e-21
Identity = 53/61 (86.89%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 2   SGPTSQGTVSGRQFLRAIGLPKCNGGVQRFPRARRRLALECKGRRELDCKTYSSSRDESR 61
           +GPT QGTVSGRQFL  +GLPK NGGVQRFPRARRRLALECKGRRELDCKT+ SSRDESR
Sbjct: 159 TGPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRDESR 218

Query: 62  P 63
           P
Sbjct: 219 P 219

[Close]

BLAST of Bhi08G000277 vs. ExPASy TrEMBL
Match: A0A6J5U9F4 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS18511 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.1e-20
Identity = 52/59 (88.14%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 4   PTSQGTVSGRQFLRAIGLPKCNGGVQRFPRARRRLALECKGRRELDCKTYSSSRDESRP 63
           PT QGTVSGRQFL  +GLPK NGGVQRFPRARRRLALECKGRRELDCKT+ SSRDESRP
Sbjct: 46  PTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRDESRP 104

[Close]

BLAST of Bhi08G000277 vs. ExPASy TrEMBL
Match: A0A371IGY9 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_00630 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.1e-20
Identity = 52/59 (88.14%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 4   PTSQGTVSGRQFLRAIGLPKCNGGVQRFPRARRRLALECKGRRELDCKTYSSSRDESRP 63
           PT QGTVSGRQFL  +GLPK NGGVQRFPRARRRLALECKGRRELDCKT+ SSRDESRP
Sbjct: 50  PTGQGTVSGRQFLWGVGLPKGNGGVQRFPRARRRLALECKGRRELDCKTHPSSRDESRP 108

[Close]

BLAST of Bhi08G000277 vs. ExPASy TrEMBL
Match: A0A3P6DQU7 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRASC138T45528Z PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.7e-20
Identity = 52/60 (86.67%), Postives = 54/60 (90.00%), Query Frame = 0


Query: 3   GPTSQGTVSGRQFLRAIGLPKCNGGVQRFPRARRRLALECKGRRELDCKTYSSSRDESRP 62
           GPT QGTVSGRQFL  +GLPK NGGVQRFPRA RRLALECKGRRELDCKT+ SSRDESRP
Sbjct: 164 GPTGQGTVSGRQFLWGVGLPKGNGGVQRFPRAGRRLALECKGRRELDCKTHPSSRDESRP 223

The following BLAST results are available for this feature:

BLAST of Bhi08G000277 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi08G000277 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi08G000277 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A498KQT9	1.1e-21	87.10	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_037508 PE=4 SV=1	[more]
A0A498JQG0	4.2e-21	86.89	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_006989 PE=4 SV=1	[more]
A0A6J5U9F4	2.1e-20	88.14	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS18511 PE=4 S...	[more]
A0A371IGY9	2.1e-20	88.14	Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_00630 P...	[more]
A0A3P6DQU7	2.7e-20	86.67	Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRASC138T45528Z PE=4 S...	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000277	Bhi08M000277	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast