Bhi08G000042 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G000042
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	PORR domain-containing protein
Location	chr8: 1584098 .. 1588911 (+)
RNA-Seq Expression	Bhi08G000042
Synteny	Bhi08G000042

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAAAAAAAAACTGCCATCAAACCACAAGCGAAGGTGTCTTGGTGGCGCAACGTTTCTCTCCTTTTTTTTCTTCTTTTTTTTTTTAGCGATTTTCAGCGGTGATCCACACTCCGATTGGCCTCAAATCAGTTTATGCACAACTCAAATAATTTGCACATCTGCAAAGTTTGAAAATTTTCGAACCCTGACCATCTTAGATTGGAGCCCATTTTGGTAAGAATTGGTATCATTGCTCTTTTGCCCTTTCGATTTGGATTTTAAGTGTTCAAATTTATATTATAAAGTCTTTGGTAAATTTTGAAGTATTCGATTAAGTACCTATCAGTATTAGCATGCCTTGAACCATTTCAGACCCGATTGAACTATGTTAGATTAGTTTCTAACCTGAGGGAAACTTAGTCTGTTGTAGTTTTGAACTAATTTGGAGTTATCGGTTATGGTTCATGGTAGATATTGGGTAAGAATATCCCTCTTGAACATTCTTCTGGTATTGATTGTTTATTGTTTATGCTTTTAGGATGTTGGTGTTTGTTCAAGGAAGTGGACTTTCGGATTGAGAAGTCTAGGTTTTCGATTGAGGTAAGTAGTTTTCACATCTCTTTCAAAATATAATGTTGACTATATATAGTGATTTGTTAAGAGTTTGAAAGAATTTTTTGAAAGTTCGAATGTATGTTTTATGTGATTTGAGTATTGGCTGAAATTGTTTATGTCAAATGAAAGTATGTGACTGTTGAAATTGTTTAGTTTTGTCACATGAAAATTGTTGAAAAGTTTGAATGGTTTAGTTTGATGAATTCTTCTGCAATTGAAGCTGTATGACTGAAATGATATGCCTGAAACTTATTTATGAAGTTCTTAAGGCTTCCATTTTGCCATGTTTTAGGAAAACATTTGCAAGAAGCATTGCCGATTCCGAAGTGAGAGTTTTGGTGTTTCTTGTGAAAACGGAATCTGGTAAGAGTCCTTAAGCTCCCAATAGAGAAATGAAAGAGTTTTCACGTCAGAATCGGATGTAGTATGGTTGGATCAGGGGCTTTTCAAGTTTGCCCATAAACTGTTTGATACTTGTTCCAACAGAGTTTAGGGTTCAAAATGAATGGAAAATCTATGTTCCTACGCCTAAATCGATATCTCAACTTTTACCCAATTTCTGGAATACATGTTTTTGATCATAAGGAATCGGCTTTTCTCTGGGTCTCAATGAGGCACAAAACTAGTGGTGGAATGAGACCGAAGAGAAAAATATATTATAGAGTTGGTGACCTGGACAAAGTTATGGACTTGCAAAAAAAGCCATCCCTTATACTAAAGCTTATAAACATTATCCAATCTCAAAAGCAAAAATTTATATTCTTGAGGGACCTAGAGAAAGAAGTAGGATTTGTCCAAAAATGGAACTTCATGGCTGTTATTGAGAAGTACTCTTCGATCTTTTATGTCAGTTCTGGAAGTAGTAGAATGCCCCCTTATGTTAGGCTCTCCAATAAAGCTGAAAGGATTGCTAGTGAAGAAGATAAGGTAAGGAGTGCAATGAAACCGATCTTAATAAAGAATTTGAGGAAGCTGTTGATGCTTTCGGTTGATTGTCGAGTACCACTCGAAAATATAGAATTCATTGCATCTGAATTGGGTTTGCCTTGTGACTTCAAAACTTCATTGATTCCTGAATACCCTGAATTCTTTTCTGTGAAGGAATTCGATGGGAAAGCTCACCTACATTTGGAAAATTGGGATTCTTCACTCGCAATCAGTGCTCGGGAAGAAAGATTTGCTAATGCTAGAGATTTATCTTCTTGTGTATATGGAAAAAGAGTTAGAATCTCAAAAGATGGCAACTTTTCTGGTCCATATGCATTCAAGATATGTTTTCCTCCAGGCTTTAGGCCAAACATGAGTTACCTTGAACATCTTGAAAGGTGGCAGAAAATGGATTTTCCTTCCCCATACTTGAACGCGAGGAGATTTGATGCAGCTGATCCGAAGGCAAGAAAGAGGGTGGTCGCAGTTCTTCACGAGTTTCTAAGTTTGACGATGGAAAAAAGGATGACATCAACACAATTGGATGCATTTCATAGGGAGTTTCTTCTACCATCTAAACTATTGCTTTGCTTATTAAAGCATCAAGGAATCTTCTACATCACTAATAAAGGTGCAAGGAGTACAGTATTACTAAAAGAAGCCTATGAAGGGCCAACTTTGATTGATAAATGTCCCTTGCTGTTGCACTCTGATAGATTCCTTTCACTTTGTGGTAGGAGGGACATGAGTTGCAATCCACACCAGGTTAGTTTCTAGTCTCATACTTATTTATTGGAAAAAAGATAATAATAATAAAGAAAAGAAAAATGAAGCTTCATCCACATGGAATTCCCTATCTAAATGTAATGAACTTGGTTGTTTTTGTCTGCTGTATTCATACACAAGTTAAAAGAAGGATGTAAAAGGGAATAACAAGGTATTCTTACAAGTCATTTTTACTGGGCAAATGTTGGCTTTAGTATACATTATAAGATTTTTGGGAAAGAGGAGTTGAGTTGGGATGCCCACACATCTAAAGATGTTTGCCATGTTTAGATTTCTCCATTTCGAGGTTTTTGATGTTCGCAAAAAGACGACCCCACCTCAAAACTCCCATTATTAGGCAAAGTGAGCTTAGCTCAACTGTAATTGGCATGTCCTACCTCTCTAGAGGTTGGAGGCTTGATCTCTCATCCCCGTAGTTGTTGTACACTAGAAAACTCCCTTGATTGATACTATTTATAAGAGTTTTGCTCCTGCAAAGGTTAAGGTATTCCTTTGCTGCTTAGCTAATTGAAGTATAAATACCCATGAGCGGCTTCCAAGAAAATGTGTGAATTGGTCTATTTTTTCCCCTCGGTTTGCCCCTTGCGTTACTCGGATGAAGAGAATCCCTTGACCACTTTATTCATTCATTGTCCTTTTGTCACTTCGGCTTGACAATGGCTTATTAAAGAATTCAACTTCTTTATTTGCTTGTCAAGTAAAATGGATGAGTGGTTGATAGGGGTCCTTGGAGGGTGGAACCTTAAAAGACAGATGAAAGGGTTTTATGGGTTGTGTTGGTTAGAGCATTGATTTGCAATGTGGTTTGAAAGAAATCTGTTGCATCTTTGACGATAAATCGTCTTCTTTTGTAATTACTGCTTGTTTTGATTCAAATGAATCGAAATGCTCACGAAATGCACCCCTGTTGAAGATCAATACTATTACAAGTACTTAAAACAAAATATGATCAAACAAAATCAAATATATTAATCTATGGTAACAAAATTATAGAAATACTACCCTTGCTTATTAAATAAAAAACACATTTTAAAACAAGATAAATATCTCACAAAATAACATCAAATGTAAAAAATCTTAAGTATGATTTGAGATCAAACAAACTACATTAACATTAATTATGCATTACTAATCAAGAACAATAGTTCTATGGTGGGAAAAAAAAGAACACATAAAATTTAAATTTGTGACCCAAAGGGAGAGAGAATATCATGTATTCGGAAAAATTGGGAAAAAAAAAAAAAAAAAAAGAAGGAAAGAAGGAAAAGAAAAACAATTAAGTGTGATCACTAAACATGGTGAAATCAAGAGAGAAAAAATAACATGCATTCGGAGAAAATTGATTTGTCATTTAGCCATTCAAACATGTTTTTCTCTTCGAAAATCTAAATAATAAGCACACCCAATTCTTCATTTTATTAAACCAATTTTTCTTTTTTTTCTTTTATGAAAAAAAAAACTATTTTTAACCCTAAACTCGATAGGTTATATTAATTTTAACTGACTTTGAATTTATTAATTTAAATTTCAAACTTGGTAGATTGTATCAAATTGAACCATAAAATTTTAATTTCATCAATTTAAAACCTCAAATTAAAATAATTTAATTTACACCTTAAAATTCTCTCTTTTTTCTCTCCCACCCCAACCTCTCCACTGTTGTCGTCGTCATTGAAAATCACTTGAAAAGCATTTTCTTAGGTTTAGATTTTGTTTGGTTTTACTGCCTAAAAGATTTGTTGATGCTTTCTTTGCTTATTTTTTTTAGGAATCAAGCGTTTGGATTAGAACGGGTTGAAAAGAACATAAAATAATGAAAATACCCTTAAAGAAGGTCAAGCTTTGACCCAGGACAAAGAGGTCAAAAAGAGGTAAAAGAGGGCAGAAACAGGCCGGTACGATGCTTTGCAGTGCCACAACCTGTAGGGTTGTAGCAAGGTGACGTCGCGACGCTGCAAAGTTTTTGTCTGCATGATTTTCATATGGTGTTGTGGCTGTGTTTCCGCTTTATTTTATATATATATTTTGTTTCGTCGTCATTTGAAGGGGGATTGATCGGGCTTTCTACGGAGGTTAAGAGGTGGACGTTCAGAGGCTTTTCTAGGGCTTAATCGCCAGATTGATCGGAAGTTGGATCGTGAAGAAGACATTGATGTGGTGTCGACAACTGATTGGGATCGACAACTAACTCCCTATTCTCTTCACACTTTCTCTTTTATGTTTAATGTTCAACATGTTTAAGGATTTAATTATGAACACGTGTGGCTAACTTGTAATTAGTTCTAGGGTTAGATTGATTACTTTTTATCATGCTTGATCA

mRNA sequence

AAAAAAAAAAAAAAAAAAAAACTGCCATCAAACCACAAGCGAAGGTGTCTTGGTGGCGCAACGTTTCTCTCCTTTTTTTTCTTCTTTTTTTTTTTAGCGATTTTCAGCGGTGATCCACACTCCGATTGGCCTCAAATCAGTTTATGCACAACTCAAATAATTTGCACATCTGCAAAGTTTGAAAATTTTCGAACCCTGACCATCTTAGATTGGAGCCCATTTTGGATGTTGGTGTTTGTTCAAGGAAGTGGACTTTCGGATTGAGAAGTCTAGGTTTTCGATTGAGGAAAACATTTGCAAGAAGCATTGCCGATTCCGAAGTGAGAGTTTTGGTGTTTCTTGTGAAAACGGAATCTGGTAAGAGTCCTTAAGCTCCCAATAGAGAAATGAAAGAGTTTTCACGTCAGAATCGGATGTAGTATGGTTGGATCAGGGGCTTTTCAAGTTTGCCCATAAACTGTTTGATACTTGTTCCAACAGAGTTTAGGGTTCAAAATGAATGGAAAATCTATGTTCCTACGCCTAAATCGATATCTCAACTTTTACCCAATTTCTGGAATACATGTTTTTGATCATAAGGAATCGGCTTTTCTCTGGGTCTCAATGAGGCACAAAACTAGTGGTGGAATGAGACCGAAGAGAAAAATATATTATAGAGTTGGTGACCTGGACAAAGTTATGGACTTGCAAAAAAAGCCATCCCTTATACTAAAGCTTATAAACATTATCCAATCTCAAAAGCAAAAATTTATATTCTTGAGGGACCTAGAGAAAGAAGTAGGATTTGTCCAAAAATGGAACTTCATGGCTGTTATTGAGAAGTACTCTTCGATCTTTTATGTCAGTTCTGGAAGTAGTAGAATGCCCCCTTATGTTAGGCTCTCCAATAAAGCTGAAAGGATTGCTAGTGAAGAAGATAAGGAATTCGATGGGAAAGCTCACCTACATTTGGAAAATTGGGATTCTTCACTCGCAATCAGTGCTCGGGAAGAAAGATTTGCTAATGCTAGAGATTTATCTTCTTGTGTATATGGAAAAAGAGTTAGAATCTCAAAAGATGGCAACTTTTCTGGTCCATATGCATTCAAGATATGTTTTCCTCCAGGCTTTAGGCCAAACATGAGTTACCTTGAACATCTTGAAAGGTGGCAGAAAATGGATTTTCCTTCCCCATACTTGAACGCGAGGAGATTTGATGCAGCTGATCCGAAGGCAAGAAAGAGGGTGGTCGCAGTTCTTCACGAGTTTCTAAGTTTGACGATGGAAAAAAGGATGACATCAACACAATTGGATGCATTTCATAGGGAGTTTCTTCTACCATCTAAACTATTGCTTTGCTTATTAAAGCATCAAGGAATCTTCTACATCACTAATAAAGGTGCAAGGAGTACAGTATTACTAAAAGAAGCCTATGAAGGGCCAACTTTGATTGATAAATGTCCCTTGCTGTTGCACTCTGATAGATTCCTTTCACTTTGTGGTAGGAGGGACATGAGTTGCAATCCACACCAGGAATCAAGCGTTTGGATTAGAACGGGTTGAAAAGAACATAAAATAATGAAAATACCCTTAAAGAAGGTCAAGCTTTGACCCAGGACAAAGAGGTCAAAAAGAGGTAAAAGAGGGCAGAAACAGGCCGGTACGATGCTTTGCAGTGCCACAACCTGTAGGGTTGTAGCAAGGTGACGTCGCGACGCTGCAAAGTTTTTGTCTGCATGATTTTCATATGGTGTTGTGGCTGTGTTTCCGCTTTATTTTATATATATATTTTGTTTCGTCGTCATTTGAAGGGGGATTGATCGGGCTTTCTACGGAGGTTAAGAGGTGGACGTTCAGAGGCTTTTCTAGGGCTTAATCGCCAGATTGATCGGAAGTTGGATCGTGAAGAAGACATTGATGTGGTGTCGACAACTGATTGGGATCGACAACTAACTCCCTATTCTCTTCACACTTTCTCTTTTATGTTTAATGTTCAACATGTTTAAGGATTTAATTATGAACACGTGTGGCTAACTTGTAATTAGTTCTAGGGTTAGATTGATTACTTTTTATCATGCTTGATCA

Coding sequence (CDS)

ATGAATGGAAAATCTATGTTCCTACGCCTAAATCGATATCTCAACTTTTACCCAATTTCTGGAATACATGTTTTTGATCATAAGGAATCGGCTTTTCTCTGGGTCTCAATGAGGCACAAAACTAGTGGTGGAATGAGACCGAAGAGAAAAATATATTATAGAGTTGGTGACCTGGACAAAGTTATGGACTTGCAAAAAAAGCCATCCCTTATACTAAAGCTTATAAACATTATCCAATCTCAAAAGCAAAAATTTATATTCTTGAGGGACCTAGAGAAAGAAGTAGGATTTGTCCAAAAATGGAACTTCATGGCTGTTATTGAGAAGTACTCTTCGATCTTTTATGTCAGTTCTGGAAGTAGTAGAATGCCCCCTTATGTTAGGCTCTCCAATAAAGCTGAAAGGATTGCTAGTGAAGAAGATAAGGAATTCGATGGGAAAGCTCACCTACATTTGGAAAATTGGGATTCTTCACTCGCAATCAGTGCTCGGGAAGAAAGATTTGCTAATGCTAGAGATTTATCTTCTTGTGTATATGGAAAAAGAGTTAGAATCTCAAAAGATGGCAACTTTTCTGGTCCATATGCATTCAAGATATGTTTTCCTCCAGGCTTTAGGCCAAACATGAGTTACCTTGAACATCTTGAAAGGTGGCAGAAAATGGATTTTCCTTCCCCATACTTGAACGCGAGGAGATTTGATGCAGCTGATCCGAAGGCAAGAAAGAGGGTGGTCGCAGTTCTTCACGAGTTTCTAAGTTTGACGATGGAAAAAAGGATGACATCAACACAATTGGATGCATTTCATAGGGAGTTTCTTCTACCATCTAAACTATTGCTTTGCTTATTAAAGCATCAAGGAATCTTCTACATCACTAATAAAGGTGCAAGGAGTACAGTATTACTAAAAGAAGCCTATGAAGGGCCAACTTTGATTGATAAATGTCCCTTGCTGTTGCACTCTGATAGATTCCTTTCACTTTGTGGTAGGAGGGACATGAGTTGCAATCCACACCAGGAATCAAGCGTTTGGATTAGAACGGGTTGA

Protein sequence

MNGKSMFLRLNRYLNFYPISGIHVFDHKESAFLWVSMRHKTSGGMRPKRKIYYRVGDLDKVMDLQKKPSLILKLINIIQSQKQKFIFLRDLEKEVGFVQKWNFMAVIEKYSSIFYVSSGSSRMPPYVRLSNKAERIASEEDKEFDGKAHLHLENWDSSLAISAREERFANARDLSSCVYGKRVRISKDGNFSGPYAFKICFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGARSTVLLKEAYEGPTLIDKCPLLLHSDRFLSLCGRRDMSCNPHQESSVWIRTG

Homology

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BLAST of Bhi08G000042 vs. TAIR 10
Match: AT1G79120.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 386.3 bits (991), Expect = 2.5e-107
Identity = 207/368 (56.25%), Postives = 248/368 (67.39%), Query Frame = 0


Query: 34  WVSMRHKT-SGGMRPKRKIYYRVGDLDKVMDLQKKPSLILKLINIIQSQKQKFIFLRDLE 93
           +V +RHK+  GG RPK+K+Y+RV DLDK +DL KKPSLIL+L +IIQ+QK   + LRDLE
Sbjct: 43  FVQVRHKSGGGGWRPKQKVYHRVHDLDKAIDLNKKPSLILQLKSIIQAQKHGSLLLRDLE 102

Query: 94  KEVGFVQKWNFMAVIEKYSSIFYVSSGSSRMPPYVRLSNKAERIASEED----------- 153
           K VGFV KWN MA IEKY +IFYV  G  + PP+V L+ KA++IA+EE            
Sbjct: 103 KHVGFVHKWNLMAAIEKYPTIFYV-GGGHKEPPFVMLTEKAKKIAAEESEATESMEPILV 162

Query: 154 -----------------------------------------------KEFDGKAHLHLEN 213
                                                          K  +GK +L LEN
Sbjct: 163 NNLRKLLMMSVDCRVPLEKVEFIQSAMGLPQDFKSTLIPKYTEFFSLKVINGKVNLVLEN 222

Query: 214 WDSSLAISAREERFANARDLSSCVYGKRVRISKDGNFSGPYAFKICFPPGFRPNMSYLEH 273
           WDSSLAI+ARE+R +      S    KRVRI+KDGNF G  AFKI FPPGFRPN SYLE 
Sbjct: 223 WDSSLAITAREDRLSREGFSESVGDRKRVRITKDGNFLGRNAFKISFPPGFRPNASYLEE 282

Query: 274 LERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMTSTQLDAFHREFLL 333
            E+WQKM+FPSPYLNARRFDAADPKARKRVVAVLHE LSLTMEKR+T  QLDAFH E+LL
Sbjct: 283 FEKWQKMEFPSPYLNARRFDAADPKARKRVVAVLHELLSLTMEKRVTCAQLDAFHSEYLL 342

Query: 334 PSKLLLCLLKHQGIFYITNKGARSTVLLKEAYEGPTLIDKCPLLLHSDRFLSLCGRRDMS 343
           PS+L+LCL+KHQGIFYITNKGAR TV LK+AY G  LI+KCPLLL  DRF++LCGR++++
Sbjct: 343 PSRLILCLIKHQGIFYITNKGARGTVFLKDAYAGSNLIEKCPLLLFHDRFVALCGRKEVN 402

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BLAST of Bhi08G000042 vs. TAIR 10
Match: AT5G21970.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 137.9 bits (346), Expect = 1.6e-32
Identity = 73/187 (39.04%), Postives = 108/187 (57.75%), Query Frame = 0


Query: 145 DGKAHLHLENWDSSLAISAREERFANARDLSSCVYGKRVRISKDGNFSGPYAFKICFPPG 204
           DG+ +L L +W+ + AI+  E++     +   C +       K G  S   AF + FPP 
Sbjct: 209 DGEEYLELVSWNPAWAITELEKKTLGITE--DCEH-------KPGMLS--LAFPMKFPPS 268

Query: 205 FRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMTSTQ 264
           ++    Y   +E +QK  + SPY +AR  +A   +  KR +AV+HE LS T+EKR+ +  
Sbjct: 269 YKKMYRYRGKIEHFQKRSYLSPYADARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDH 328

Query: 265 LDAFHREFLLPSKLLLCLLKHQGIFYITNKGARSTVLLKEAYEGPTLIDKCPLLLHSDRF 324
           L  F REF++P KL+   LKH GIFY++ +G R +V L E YEGP LI+KCPL+L  ++ 
Sbjct: 329 LTHFRREFVMPQKLMRIFLKHCGIFYVSERGKRFSVFLTEGYEGPELIEKCPLILWKEKL 384

Query: 325 LSLCGRR 332
           L   G R
Sbjct: 389 LKFTGYR 384

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BLAST of Bhi08G000042 vs. TAIR 10
Match: AT3G63090.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 100.1 bits (248), Expect = 3.6e-21
Identity = 79/266 (29.70%), Postives = 120/266 (45.11%), Query Frame = 0


Query: 65  QKKPSLILKLINIIQSQKQKFIF---LRDLEKEVGFVQKWNFMAVIEKYSSIFYVSSGSS 124
           + +P L+ KL  ++   K K I    L  ++++ GF   +  M +++KY           
Sbjct: 137 ENEPLLVSKLCQLLMMAKDKVISADKLVHVKRDFGFPNDF-LMKLVQKY----------- 196

Query: 125 RMPPYVRLSNKAERIASEEDKEFDGKAHLHLENWDSSLAISAREERFANARDLSSCVYGK 184
             P Y RL+   E          +GK+ L L +W+   A S  E R   A D  +   G 
Sbjct: 197 --PNYFRLTGLPE----------EGKSFLELVSWNPDFAKSKIELR---AED-ETLKTGV 256

Query: 185 RVRISKDGNFSGPYAFKICFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKAR 244
           R+R +          + +  P GF       E    W + D+ SPY +    D A  +  
Sbjct: 257 RIRPN----------YNVKLPSGFFLRKEMREWTRDWLEQDYISPYEDVSHLDQASKEME 316

Query: 245 KRVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGARSTVL 304
           KR V V+HE LSL++ KR+    L  F  EF   +       +H GIFY++ KG   T +
Sbjct: 317 KRTVGVVHELLSLSLLKRVPVPTLGKFCDEFRFSNAFSSVFTRHSGIFYLSLKGGIKTAV 364

Query: 305 LKEAYEGPTLIDKCPLLLHSDRFLSL 328
           L+EAY+   L+D+ PLL   D+FL L
Sbjct: 377 LREAYKDDELVDRDPLLAIKDKFLRL 364

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BLAST of Bhi08G000042 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 95.1 bits (235), Expect = 1.2e-19
Identity = 60/194 (30.93%), Postives = 93/194 (47.94%), Query Frame = 0


Query: 150 LHLENWDSSLAISAREERFANARDLSSCVYGKRVRISKDGNFSGPYAFKICFPPGFRPNM 209
           L L +WD  LA+S                   ++++ +D       AF + F  GF    
Sbjct: 202 LKLIHWDEHLAVS-------------------QMQLREDVGNDERMAFPVKFTRGFGLKR 261

Query: 210 SYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMTSTQLDAFH 269
             +E L+ WQ++ + SPY++A   D     + KR V V HE L LT+ K+     +    
Sbjct: 262 KSIEWLQEWQRLPYTSPYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLR 321

Query: 270 REFLLPSKLLLCLLKHQGIFYITNKGARSTVLLKEAYEGPTLIDKCPLLLHSDRFLSLC- 329
           + F LP K      +H GIFYI+ K    TV+L+EAY+   LI+K PL+   ++F ++  
Sbjct: 322 KPFALPQKFTKVFERHPGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMN 376

Query: 330 -GRRDMSCNPHQES 342
            G  D S   +Q+S
Sbjct: 382 EGFLDRSRGLYQKS 376

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BLAST of Bhi08G000042 vs. TAIR 10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 92.0 bits (227), Expect = 9.8e-19
Identity = 94/359 (26.18%), Postives = 148/359 (41.23%), Query Frame = 0


Query: 36  SMRHKTSGGMRPKRKIYYRVGDL--DKVMDLQKKPSLILKLINIIQSQKQKFIFLRDLEK 95
           S   KT   + P R    R  +L  D V+   KK  L+L +  I+ SQ  + + LR L K
Sbjct: 60  STSRKTRVVVEPVRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGK 119

Query: 96  ---EVGFVQKWNFMAVIEKYSSIF-YVSSGSSRMPPYVRLSNKAERIASEE--------- 155
              ++G  ++  F+A++ KY  +F  V  G+  +    +++++AER+  +E         
Sbjct: 120 YRRDLGLKKRRRFIALLRKYPGVFEIVEEGAYSL--RFKMTSEAERLYLDEMRIRNELED 179

Query: 156 --------------DKE--FDGKAH---------------------------------LH 215
                         DK    +  +H                                 L 
Sbjct: 180 VLVVKLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALE 239

Query: 216 LENWDSSLAISAREERFANARDLSSCVYGKRVRISKDGNF---SGPYAFKICFPPGFRPN 275
           L +WD  LA+SA E        LS      R R S++ N      P   ++  P G   +
Sbjct: 240 LTHWDPELAVSAAE--------LSE--DDNRTRESEERNLIIDRPPKFNRVKLPRGLNLS 299

Query: 276 MSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMTSTQLDAF 328
            S    + +++ M + SPY +     +   +  K    V+HE LSLT EKR     L  F
Sbjct: 300 KSETRKISQFRDMQYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHF 359

[Close]

BLAST of Bhi08G000042 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 6.2e-18
Identity = 83/331 (25.08%), Postives = 143/331 (43.20%), Query Frame = 0


Query: 59  DKVMDLQKKPSLILKLINIIQSQKQKFIFLRDL---EKEVGFVQKWNFMAVIEKYSSIF- 118
           D V+   KK  L+LKL NI+ +Q  + + LR+L    +++G  +K   +A++ ++  +F 
Sbjct: 64  DTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLIALLRRFPGVFD 123

Query: 119 ----YVSSGSSRMPP--------YVRLSNKAERIA----------SEEDK---------- 178
                V S   R+ P         +RL N++E +A          S+E +          
Sbjct: 124 VVEEGVYSLRFRLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQEKRILIEKVAHLK 183

Query: 179 ------------------------EFDGKAHLHLENWDSSLAISARE--ERFANARDLSS 238
                                     D    L L +WD  LA+SA E  E  + AR+   
Sbjct: 184 HDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTHWDPELAVSAAELAEEESRAREAEE 243

Query: 239 CVYGKRVRISKDGNFSGPYAFKICFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAA 298
               + + I +   F+     ++  P G +        + R+++M + SPY +     + 
Sbjct: 244 ----RNLIIDRPLKFN-----RVRLPKGLKLTRGEARRIARFKEMPYISPYADFSHLRSG 303

Query: 299 DPKARKRVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGA 328
             +  K    V+HE LSLT+EKR     L  F  EF     L   +++H  +FY++ KG 
Sbjct: 304 SDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMFYVSFKGD 363

[Close]

BLAST of Bhi08G000042 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 8.1e-18
Identity = 83/331 (25.08%), Postives = 142/331 (42.90%), Query Frame = 0


Query: 59  DKVMDLQKKPSLILKLINIIQSQKQKFIFLRDL---EKEVGFVQKWNFMAVIEKYSSIFY 118
           D V+   KK  L+LKL NI+ S   + + LRDL    +++G  +K   +A+++++  +F 
Sbjct: 70  DNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLIALLKRFPGVFE 129

Query: 119 -----VSSGSSRMPP--------YVRLSNKAERIA---------SEEDK----------- 178
                V S   R+ P         + L N++E +A           +DK           
Sbjct: 130 VVEEGVYSLRFRLTPAAERLYLDELHLKNESEGLAVTKLRKLLMMSQDKRILIEKIAHLK 189

Query: 179 ------------------------EFDGKAHLHLENWDSSLAISARE--ERFANARDLSS 238
                                   + D    L L +WD  LA+SA E  E    AR+   
Sbjct: 190 NDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWDPELAVSAAEVAEEENRAREEQE 249

Query: 239 CVYGKRVRISKDGNFSGPYAFKICFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAA 298
               + + I +   F+     ++  P G + +      + ++++M + SPY +     + 
Sbjct: 250 ----RNLIIDRPLKFN-----RVKLPQGLKLSRGEARRVAQFKEMPYISPYSDFSHLRSG 309

Query: 299 DPKARKRVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGA 328
             +  K    V+HE LSLT+EKR     L  F  EF     L   L++H  +FY++ KG 
Sbjct: 310 SAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRHPDMFYVSLKGD 369

[Close]

BLAST of Bhi08G000042 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.4e-17
Identity = 94/359 (26.18%), Postives = 148/359 (41.23%), Query Frame = 0


Query: 36  SMRHKTSGGMRPKRKIYYRVGDL--DKVMDLQKKPSLILKLINIIQSQKQKFIFLRDLEK 95
           S   KT   + P R    R  +L  D V+   KK  L+L +  I+ SQ  + + LR L K
Sbjct: 60  STSRKTRVVVEPVRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGK 119

Query: 96  ---EVGFVQKWNFMAVIEKYSSIF-YVSSGSSRMPPYVRLSNKAERIASEE--------- 155
              ++G  ++  F+A++ KY  +F  V  G+  +    +++++AER+  +E         
Sbjct: 120 YRRDLGLKKRRRFIALLRKYPGVFEIVEEGAYSL--RFKMTSEAERLYLDEMRIRNELED 179

Query: 156 --------------DKE--FDGKAH---------------------------------LH 215
                         DK    +  +H                                 L 
Sbjct: 180 VLVVKLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALE 239

Query: 216 LENWDSSLAISAREERFANARDLSSCVYGKRVRISKDGNF---SGPYAFKICFPPGFRPN 275
           L +WD  LA+SA E        LS      R R S++ N      P   ++  P G   +
Sbjct: 240 LTHWDPELAVSAAE--------LSE--DDNRTRESEERNLIIDRPPKFNRVKLPRGLNLS 299

Query: 276 MSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMTSTQLDAF 328
            S    + +++ M + SPY +     +   +  K    V+HE LSLT EKR     L  F
Sbjct: 300 KSETRKISQFRDMQYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHF 359

[Close]

BLAST of Bhi08G000042 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 4.5e-16
Identity = 51/140 (36.43%), Postives = 77/140 (55.00%), Query Frame = 0


Query: 195 YAFKICFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFD----AADPKARKRVVAVLHE 254
           ++F + FPPGF+    +   + +WQ++ + SPY +   +D     A  +  KR VA +HE
Sbjct: 242 FSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHE 301

Query: 255 FLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLLKHQGIFYIT---NKGARSTVLLKEAYE 314
            LSLT+EK++T  ++  F     LP KL   LL+HQGIFYI+   N G   TV L+E Y+
Sbjct: 302 LLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYK 361

Query: 315 GPTLIDKCPLLLHSDRFLSL 328
              L++   + L   R   L
Sbjct: 362 RGELVEPNDVYLARRRLAEL 381

[Close]

BLAST of Bhi08G000042 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.3e-09
Identity = 38/138 (27.54%), Postives = 63/138 (45.65%), Query Frame = 0


Query: 204 GFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMTST 263
           G R  +   + L  +QK+ + SPY +    D +   A KRVV  LHE L L +E      
Sbjct: 231 GCRLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERK 290

Query: 264 QLDAFHREFLLPSKLLLCLLKHQGIFYITNKGARSTVLLKEAYEGPTLIDKCPLLLHSDR 323
           +L    + F LP K+     +H  IFY++ K    T +L+E Y     ++  P+L    +
Sbjct: 291 KLLCLKKHFGLPQKVHKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKK 350

Query: 324 FLSLCGRRDMSCNPHQES 342
           ++ L    ++     + S
Sbjct: 351 YIQLMKNSELILKSRRNS 368

[Close]

BLAST of Bhi08G000042 vs. ExPASy TrEMBL
Match: A0A0A0LVT2 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G164710 PE=4 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 5.8e-168
Identity = 308/399 (77.19%), Postives = 317/399 (79.45%), Query Frame = 0


Query: 1   MNGKSMFLRLNRYLNFYPISGIHVFDHKESAFLWVSMRHKTSGGMRPKRKIYYRVGDLDK 60
           MNGKSMFLRLNRY N YPIS  HVFDHK+SAFLWV MRHK+SGGMRPKRKIYYRV +LDK
Sbjct: 1   MNGKSMFLRLNRYPNSYPISETHVFDHKKSAFLWVLMRHKSSGGMRPKRKIYYRVAELDK 60

Query: 61  VMDLQKKPSLILKLINIIQSQKQKFIFLRDLEKEVGFVQKWNFMAVIEKYSSIFYVSSGS 120
           VMDLQKKPSLILKLINIIQSQK KFI LRDLEKEVGFVQKWNFMAVIEKYSSIFYV SGS
Sbjct: 61  VMDLQKKPSLILKLINIIQSQKNKFILLRDLEKEVGFVQKWNFMAVIEKYSSIFYVGSGS 120

Query: 121 SRMPPYVRLSNKAERIASEED--------------------------------------- 180
           SR+PPYVRLSNKAE IASEED                                       
Sbjct: 121 SRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPLENIEFIASELG 180

Query: 181 -------------------KEFDGKAHLHLENWDSSLAISAREERFANARDLSSCVYGKR 240
                              KE DGKAHLHLENWDSSLAI ARE+RFA ARDLSSC YGKR
Sbjct: 181 LPCDFKTSLIPKYPEFFSVKEVDGKAHLHLENWDSSLAICAREDRFAKARDLSSCGYGKR 240

Query: 241 VRISKDGNFSGPYAFKICFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARK 300
           VRISKDGNFSGP+AFK+CFP GFRPN SYLEHLERWQKMDFPSPYLNARRFD ADPK RK
Sbjct: 241 VRISKDGNFSGPFAFKMCFPSGFRPNTSYLEHLERWQKMDFPSPYLNARRFDVADPKTRK 300

Query: 301 RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGARSTVLL 342
           RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCL+KHQGIFYITNKGARSTV L
Sbjct: 301 RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQGIFYITNKGARSTVFL 360

[Close]

BLAST of Bhi08G000042 vs. ExPASy TrEMBL
Match: A0A1S3CE49 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103499943 PE=4 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 3.5e-165
Identity = 303/399 (75.94%), Postives = 315/399 (78.95%), Query Frame = 0


Query: 1   MNGKSMFLRLNRYLNFYPISGIHVFDHKESAFLWVSMRHKTSGGMRPKRKIYYRVGDLDK 60
           MNGKSMFLRLNRY N YPIS  HVFDHK+SAFLWV MRHK+SGGMRPKRKIYYRV +LDK
Sbjct: 1   MNGKSMFLRLNRYPNSYPISETHVFDHKKSAFLWVLMRHKSSGGMRPKRKIYYRVAELDK 60

Query: 61  VMDLQKKPSLILKLINIIQSQKQKFIFLRDLEKEVGFVQKWNFMAVIEKYSSIFYVSSGS 120
           VMDLQKKPSLILKLINIIQSQK KFI LRDLEKEVGFVQKWNFMAVIEKYSSIFYV SGS
Sbjct: 61  VMDLQKKPSLILKLINIIQSQKHKFILLRDLEKEVGFVQKWNFMAVIEKYSSIFYVGSGS 120

Query: 121 SRMPPYVRLSNKAERIASEED--------------------------------------- 180
           SR+PPYVRLSNKAE IASEED                                       
Sbjct: 121 SRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPLENIEFIASELG 180

Query: 181 -------------------KEFDGKAHLHLENWDSSLAISAREERFANARDLSSCVYGKR 240
                              KE DGKAHL+LENWDSSLA+ ARE+ F  ARDLSSC  GKR
Sbjct: 181 LPCDFKTSLIPKYPEFFSVKEADGKAHLNLENWDSSLAVCAREDGFGKARDLSSCGSGKR 240

Query: 241 VRISKDGNFSGPYAFKICFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARK 300
           VRISKDGNF GP+AFK+CFPPGFRPN SYLEHLERWQKMDFPSPYLNARRFD ADPK RK
Sbjct: 241 VRISKDGNFCGPFAFKMCFPPGFRPNTSYLEHLERWQKMDFPSPYLNARRFDVADPKTRK 300

Query: 301 RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGARSTVLL 342
           RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCL+KHQGIFYITNKGARSTV L
Sbjct: 301 RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQGIFYITNKGARSTVFL 360

[Close]

BLAST of Bhi08G000042 vs. ExPASy TrEMBL
Match: A0A5A7T281 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003010 PE=4 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 3.5e-165
Identity = 303/399 (75.94%), Postives = 315/399 (78.95%), Query Frame = 0


Query: 1   MNGKSMFLRLNRYLNFYPISGIHVFDHKESAFLWVSMRHKTSGGMRPKRKIYYRVGDLDK 60
           MNGKSMFLRLNRY N YPIS  HVFDHK+SAFLWV MRHK+SGGMRPKRKIYYRV +LDK
Sbjct: 1   MNGKSMFLRLNRYPNSYPISETHVFDHKKSAFLWVLMRHKSSGGMRPKRKIYYRVAELDK 60

Query: 61  VMDLQKKPSLILKLINIIQSQKQKFIFLRDLEKEVGFVQKWNFMAVIEKYSSIFYVSSGS 120
           VMDLQKKPSLILKLINIIQSQK KFI LRDLEKEVGFVQKWNFMAVIEKYSSIFYV SGS
Sbjct: 61  VMDLQKKPSLILKLINIIQSQKHKFILLRDLEKEVGFVQKWNFMAVIEKYSSIFYVGSGS 120

Query: 121 SRMPPYVRLSNKAERIASEED--------------------------------------- 180
           SR+PPYVRLSNKAE IASEED                                       
Sbjct: 121 SRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPLENIEFIASELG 180

Query: 181 -------------------KEFDGKAHLHLENWDSSLAISAREERFANARDLSSCVYGKR 240
                              KE DGKAHL+LENWDSSLA+ ARE+ F  ARDLSSC  GKR
Sbjct: 181 LPCDFKTSLIPKYPEFFSVKEADGKAHLNLENWDSSLAVCAREDGFGKARDLSSCGSGKR 240

Query: 241 VRISKDGNFSGPYAFKICFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARK 300
           VRISKDGNF GP+AFK+CFPPGFRPN SYLEHLERWQKMDFPSPYLNARRFD ADPK RK
Sbjct: 241 VRISKDGNFCGPFAFKMCFPPGFRPNTSYLEHLERWQKMDFPSPYLNARRFDVADPKTRK 300

Query: 301 RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGARSTVLL 342
           RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCL+KHQGIFYITNKGARSTV L
Sbjct: 301 RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQGIFYITNKGARSTVFL 360

[Close]

BLAST of Bhi08G000042 vs. ExPASy TrEMBL
Match: A0A6J1I8Q3 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111472469 PE=4 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 1.5e-155
Identity = 295/397 (74.31%), Postives = 306/397 (77.08%), Query Frame = 0


Query: 1   MNGKSMFLRLNRYLNFYPISGIHVFDHKESAFLWVSMRHKTSGGMRPKRKIYYRVGDLDK 60
           MNGK+MFLRLNR        GIHVF+HKES FLWV MRHK+SGGMRPKRKIYYRV +LDK
Sbjct: 1   MNGKTMFLRLNR--------GIHVFNHKESGFLWVLMRHKSSGGMRPKRKIYYRVDELDK 60

Query: 61  VMDLQKKPSLILKLINIIQSQKQKFIFLRDLEKEVGFVQKWNFMAVIEKYSSIFYVSSGS 120
           VM+LQKKPSLILKLINIIQSQK KFIFLRDLEKEVGFVQKWNFMAVIE+YSSIFYV SGS
Sbjct: 61  VMELQKKPSLILKLINIIQSQKHKFIFLRDLEKEVGFVQKWNFMAVIERYSSIFYVDSGS 120

Query: 121 SRMPPYVRLSNKAERIASEED--------------------------------------- 180
            R  PYVRL+NKAE+IASEE                                        
Sbjct: 121 CRR-PYVRLTNKAEKIASEEHKVKSSMEPILVKNLRKLLMLSVDCRVPLENIEFIASELG 180

Query: 181 -------------------KEFDGKAHLHLENWDSSLAISAREERFANARDLSSCVYGKR 240
                              KE DGKAHLHLENWDSSLAISAREE F  ARD+SSC   KR
Sbjct: 181 LPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRARDVSSCENRKR 240

Query: 241 VRISKDGNFSGPYAFKICFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARK 300
           VRISKDGNFSGP+AFK+CFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARK
Sbjct: 241 VRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARK 300

Query: 301 RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGARSTVLL 340
           RVVAVLHEFLSLTMEKRM STQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGARSTVLL
Sbjct: 301 RVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGARSTVLL 360

[Close]

BLAST of Bhi08G000042 vs. ExPASy TrEMBL
Match: A0A6J1F3A5 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111439572 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 4.8e-154
Identity = 293/397 (73.80%), Postives = 304/397 (76.57%), Query Frame = 0


Query: 1   MNGKSMFLRLNRYLNFYPISGIHVFDHKESAFLWVSMRHKTSGGMRPKRKIYYRVGDLDK 60
           MNGK+M LRLNR        GIHVF+HKES FLWV MRHK+SGGMRPKRKIYYRV +LDK
Sbjct: 1   MNGKTMLLRLNR--------GIHVFNHKESGFLWVLMRHKSSGGMRPKRKIYYRVDELDK 60

Query: 61  VMDLQKKPSLILKLINIIQSQKQKFIFLRDLEKEVGFVQKWNFMAVIEKYSSIFYVSSGS 120
           VM+LQKKPSLILKLINIIQSQK KFI LRDLEKEVGFVQKWNFMAVIEKYSSIFYV SGS
Sbjct: 61  VMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGS 120

Query: 121 SRMPPYVRLSNKAERIASEED--------------------------------------- 180
            R  PYVRL+NKAE+IASEE                                        
Sbjct: 121 CRR-PYVRLTNKAEKIASEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELG 180

Query: 181 -------------------KEFDGKAHLHLENWDSSLAISAREERFANARDLSSCVYGKR 240
                              KE DGKAHLHLENWDSSLAISAREE F   RD+SSC   KR
Sbjct: 181 LPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCENRKR 240

Query: 241 VRISKDGNFSGPYAFKICFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARK 300
           VRISKDGNFSGP+AFK+CFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARK
Sbjct: 241 VRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARK 300

Query: 301 RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGARSTVLL 340
           RVVAVLHEFLSLTMEKRM STQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGARSTVLL
Sbjct: 301 RVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGARSTVLL 360

The following BLAST results are available for this feature:

BLAST of Bhi08G000042 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79120.1	2.5e-107	56.25	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G21970.1	1.6e-32	39.04	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G63090.1	3.6e-21	29.70	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G48040.1	1.2e-19	30.93	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G01037.1	9.8e-19	26.18	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

BLAST of Bhi08G000042 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B6TTV8	6.2e-18	25.08	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]
Q65XL5	8.1e-18	25.08	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
A0MFS5	1.4e-17	26.18	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q689D6	4.5e-16	36.43	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]
Q9ZUZ6	5.3e-09	27.54	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]

BLAST of Bhi08G000042 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVT2	5.8e-168	77.19	PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G164710 PE=4 S...	[more]
A0A1S3CE49	3.5e-165	75.94	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103499943 PE=4...	[more]
A0A5A7T281	3.5e-165	75.94	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1I8Q3	1.5e-155	74.31	protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111472469...	[more]
A0A6J1F3A5	4.8e-154	73.80	protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114395...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 146..331 e-value: 1.4E-58 score: 198.4 coord: 54..142 e-value: 6.6E-13 score: 48.3
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 148..335
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 30..142
None	No IPR available	PANTHER	PTHR31476:SF11	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN	coord: 30..142 coord: 148..335

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000042	Bhi08M000042	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding