Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGAAAGTCATTCCTACCTTGTGAAACAACTCAAGAGATCAGACTTAGACAAACGTGTGAGAAGCATCTTTGGCTTTTGTTTAAATGAGTATGAGAGAGGCATTGCTACTCTCATATCATCATTAGAAGCATTGTTGAAGGAACACAAAAAAGATTTGAGCTACAATATGACTTTTGTATTTGACATTGTAGTGGATTGTGAATTTGAATTTGATCTCGATAATGTGCCACCACCCCTATCTTGGTCGTCTCGTTCTCTAAACTTGCGAAACCTTTTGGAACTTGCAATGGGGACTGCAAATCTCTTAGAGTGCAATCAAGTTCTGTGA mRNA sequence
ATGACTGAAAGTCATTCCTACCTTGTGAAACAACTCAAGAGATCAGACTTAGACAAACGTGTGAGAAGCATCTTTGGCTTTTGTTTAAATGAGTATGAGAGAGGCATTGCTACTCTCATATCATCATTAGAAGCATTGTTGAAGGAACACAAAAAAGATTTGAGCTACAATATGACTTTTGTATTTGACATTGTAGTGGATTGTGAATTTGAATTTGATCTCGATAATGTGCCACCACCCCTATCTTGGTCGTCTCGTTCTCTAAACTTGCGAAACCTTTTGGAACTTGCAATGGGGACTGCAAATCTCTTAGAGTGCAATCAAGTTCTGTGA Coding sequence (CDS)
ATGACTGAAAGTCATTCCTACCTTGTGAAACAACTCAAGAGATCAGACTTAGACAAACGTGTGAGAAGCATCTTTGGCTTTTGTTTAAATGAGTATGAGAGAGGCATTGCTACTCTCATATCATCATTAGAAGCATTGTTGAAGGAACACAAAAAAGATTTGAGCTACAATATGACTTTTGTATTTGACATTGTAGTGGATTGTGAATTTGAATTTGATCTCGATAATGTGCCACCACCCCTATCTTGGTCGTCTCGTTCTCTAAACTTGCGAAACCTTTTGGAACTTGCAATGGGGACTGCAAATCTCTTAGAGTGCAATCAAGTTCTGTGA Protein sequence
MTESHSYLVKQLKRSDLDKRVRSIFGFCLNEYERGIATLISSLEALLKEHKKDLSYNMTFVFDIVVDCEFEFDLDNVPPPLSWSSRSLNLRNLLELAMGTANLLECNQVL
Homology
BLAST of Bhi07G000644 vs. ExPASy TrEMBL
Match:
A0A6J1C7W5 (uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008804 PE=4 SV=1)
HSP 1 Score: 109.8 bits (273), Expect = 7.5e-21
Identity = 56/108 (51.85%), Postives = 75/108 (69.44%), Query Frame = 0
Query: 2 TESHSYLVKQLKRSDLDKRVRSIFGFCLNEYERGIATLISSLEALLKEHKKDLSYNMTFV 61 T++H YL++QLKRSDLDK +R F C+ +YERG+ L SSLEALLK K DL ++ Sbjct: 61 TDNHLYLMEQLKRSDLDKDIRYTFNVCVEQYERGLDILKSSLEALLKNDKDDLGLILSDA 120 Query: 62 FDIVVDCEFEFDLDNVPPPLSWSSRSLNLRNLLELAMGTANLLECNQV 110 FD +V CE +F ++ P P SW + L LR LL L+MGTANL++C +V Sbjct: 121 FDKIVACEDDF--ESTPEPPSWLAHYLPLRKLLALSMGTANLIQCKKV 166
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A6J1C7W5 7.5e-21 51.85 uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
A T G A C T G A A A G T C A T T C C T A C C T T G T G A A A C A A C T C A A G A G A T C A G A C T T A G A C A A A C G T G T G A G A A G C A T C T T T G G C T T T T G T T T A A A T G A G T A T G A G A G A G G C A T T G C T A C T C T C A T A T C A T C A T T A G A A G C A T T G T T G A A G G A A C A C A A A A A A G A T T T G A G C T A C A A T A T G A C T T T T G T A T T T G A C A T T G T A G T G G A T T G T G A A T T T G A A T T T G A T C T C G A T A A T G T G C C A C C A C C C C T A T C T T G G T C G T C T C G T T C T C T A A A C T T G C G A A A C C T T T T G G A A C T T G C A A T G G G G A C T G C A A A T C T C T T A G A G T G C A A T C A A G T T C T G T G A 50 100 150 200 250 300 Score = Expect = 1.5E-6 / Score = 30.3 Score = Sequence Coil G3DSA:1.20.140.40 SSF101148
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 29..49
IPR035513 Invertase/pectin methylesterase inhibitor domain superfamily GENE3D 1.20.140.40 Invertase/pectin methylesterase inhibitor family protein coord: 1..106 e-value: 1.5E-6 score: 30.3
IPR035513 Invertase/pectin methylesterase inhibitor domain superfamily SUPERFAMILY 101148 Plant invertase/pectin methylesterase inhibitor coord: 6..97
Relationships
The following mRNA feature(s) are a part of this gene: