Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptide exon CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGAAGTTTTCAAAAGTCCGAGGAGTTTTGAGCGTGAGCTACCACTCATGCAGCGGCAAAGACCCGCAACTCTCGAAGAGGAA GTAACTGCTACAAGCTATTGCTCTATGTAGGAAAGCACCATGCCAAATGTGTTCGAAGAAGAAGAGCAAAGCAAAGAGAAACAGACAAATTCCAGATGCCCTCAGACAGATGCCACTAAACAA GTATTTCATTGACTAGTAAGTGATAGCTGTCAGGTTCGCAGAATGATATACTGGAGGAAGGTGGGATGACGTCAGGAGTTTCGTTTCTTCTTCTTCACGCCGGTATTAGATTAGTGTCTTACTCCCCGTCTCGTCTCGGCTGAAAATTTTGTTCTTTCCTTACCCTCTCCCTATCAGTCGAGCTGCTTCGCTGCCTCGACGCATTCCCTCTCTCCCCCGGCATCGTCCCAACGTAAAAAAAGTGAACTTGAGCTCAATCCAACAGTGTGCTGGCCTTATACAAGACCCATTTGGCTCGCCGGCCGCTTGGGCTCCGCGTTTCAAGTTCGTTATCCTAACCGTCTCCTCTGCTCCACCGGGAGCCTGGCCCCTCTGACGACGGCGGCTAGGAGGGATCGCTAG mRNA sequence
ATGGTAGAAGTTTTCAAAAGTCCGAGGAGTTTTGAGCGTGAGCTACCACTCATGCAGCGGCAAAGACCCGCAACTCTCGAAGAGGAAGAAAGCACCATGCCAAATGTGTTCGAAGAAGAAGAGCAAAGCAAAGAGAAACAGACAAATTCCAGATGCCCTCAGACAGATGCCACTAAACAATGTCTTACTCCCCGTCTCGTCTCGGCTGAAAATTTTGTTCTTTCCTTACCCTCTCCCTATCAGTCGAGCTGCTTCGCTGCCTCGACGCATTCCCTCTCTCCCCCGGCATCGTCCCAACGTAAAAAAAGTGAACTTGAGCTCAATCCAACAGTGTGCTGGCCTTATACAAGACCCATTTGGCTCGCCGGCCGCTTGGGCTCCGCGTTTCAAGTTCGTTATCCTAACCGTCTCCTCTGCTCCACCGGGAGCCTGGCCCCTCTGACGACGGCGGCTAGGAGGGATCGCTAG Coding sequence (CDS)
ATGGTAGAAGTTTTCAAAAGTCCGAGGAGTTTTGAGCGTGAGCTACCACTCATGCAGCGGCAAAGACCCGCAACTCTCGAAGAGGAAGAAAGCACCATGCCAAATGTGTTCGAAGAAGAAGAGCAAAGCAAAGAGAAACAGACAAATTCCAGATGCCCTCAGACAGATGCCACTAAACAATGTCTTACTCCCCGTCTCGTCTCGGCTGAAAATTTTGTTCTTTCCTTACCCTCTCCCTATCAGTCGAGCTGCTTCGCTGCCTCGACGCATTCCCTCTCTCCCCCGGCATCGTCCCAACGTAAAAAAAGTGAACTTGAGCTCAATCCAACAGTGTGCTGGCCTTATACAAGACCCATTTGGCTCGCCGGCCGCTTGGGCTCCGCGTTTCAAGTTCGTTATCCTAACCGTCTCCTCTGCTCCACCGGGAGCCTGGCCCCTCTGACGACGGCGGCTAGGAGGGATCGCTAG Protein sequence
MVEVFKSPRSFERELPLMQRQRPATLEEEESTMPNVFEEEEQSKEKQTNSRCPQTDATKQCLTPRLVSAENFVLSLPSPYQSSCFAASTHSLSPPASSQRKKSELELNPTVCWPYTRPIWLAGRLGSAFQVRYPNRLLCSTGSLAPLTTAARRDR
Homology
BLAST of Bhi07G000110 vs. ExPASy TrEMBL
Match:
B9T9N0 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_2040560 PE=4 SV=1)
HSP 1 Score: 56.2 bits (134), Expect = 1.4e-04
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0
Query: 121 LAGRLGSAFQVRYPNRLLCSTGSLAP 147 LAGRLGSAFQVRYPNRLLCSTGSLAP Sbjct: 14 LAGRLGSAFQVRYPNRLLCSTGSLAP 39
BLAST of Bhi07G000110 vs. ExPASy TrEMBL
Match:
A0A200Q5G5 (Uncharacterized protein ycf68 OS=Macleaya cordata OX=56857 GN=BVC80_4285g1 PE=3 SV=1)
HSP 1 Score: 56.2 bits (134), Expect = 1.4e-04
Identity = 31/47 (65.96%), Postives = 32/47 (68.09%), Query Frame = 0
Query: 105 LELNPTVCWPYTRPIW-----LAGRLGSAFQVRYPNRLLCSTGSLAP 147 LE P P TR + LAGR GSAFQVRYPNRLLCSTGSLAP Sbjct: 50 LECQPQRGMPSTRALLATNHSLAGRSGSAFQVRYPNRLLCSTGSLAP 96
BLAST of Bhi07G000110 vs. ExPASy TrEMBL
Match:
A0A3S3PCJ0 (Uncharacterized protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02769500 PE=4 SV=1)
HSP 1 Score: 53.9 bits (128), Expect = 6.9e-04
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 0
Query: 121 LAGRLGSAFQVRYPNRLLCSTGSLAP 147 LAGR GSAFQVRYPNRLLCSTGSLAP Sbjct: 14 LAGRSGSAFQVRYPNRLLCSTGSLAP 39
BLAST of Bhi07G000110 vs. ExPASy TrEMBL
Match:
A0A443Q4L0 (Uncharacterized protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02744000 PE=4 SV=1)
HSP 1 Score: 53.9 bits (128), Expect = 6.9e-04
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 0
Query: 121 LAGRLGSAFQVRYPNRLLCSTGSLAP 147 LAGR GSAFQVRYPNRLLCSTGSLAP Sbjct: 14 LAGRSGSAFQVRYPNRLLCSTGSLAP 39
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
B9T9N0 1.4e-04 100.00 Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_2040560 PE=4 SV=1 [more]
A0A200Q5G5 1.4e-04 65.96 Uncharacterized protein ycf68 OS=Macleaya cordata OX=56857 GN=BVC80_4285g1 PE=3 ... [more]
A0A3S3PCJ0 6.9e-04 96.15 Uncharacterized protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_... [more]
A0A443Q4L0 6.9e-04 96.15 Uncharacterized protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
A T G G T A G A A G T T T T C A A A A G T C C G A G G A G T T T T G A G C G T G A G C T A C C A C T C A T G C A G C G G C A A A G A C C C G C A A C T C T C G A A G A G G A A G A A A G C A C C A T G C C A A A T G T G T T C G A A G A A G A A G A G C A A A G C A A A G A G A A A C A G A C A A A T T C C A G A T G C C C T C A G A C A G A T G C C A C T A A A C A A T G T C T T A C T C C C C G T C T C G T C T C G G C T G A A A A T T T T G T T C T T T C C T T A C C C T C T C C C T A T C A G T C G A G C T G C T T C G C T G C C T C G A C G C A T T C C C T C T C T C C C C C G G C A T C G T C C C A A C G T A A A A A A A G T G A A C T T G A G C T C A A T C C A A C A G T G T G C T G G C C T T A T A C A A G A C C C A T T T G G C T C G C C G G C C G C T T G G G C T C C G C G T T T C A A G T T C G T T A T C C T A A C C G T C T C C T C T G C T C C A C C G G G A G C C T G G C C C C T C T G A C G A C G G C G G C T A G G A G G G A T C G C T A G 50 100 150 200 250 300 350 400 450 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..16
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..57
Relationships
The following mRNA feature(s) are a part of this gene: