Bhi06G000030 (gene) Wax gourd (B227) v1

Overview


Name	Bhi06G000030
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Mediator of RNA polymerase II transcription subunit 17
Location	chr6: 785013 .. 793245 (+)
RNA-Seq Expression	Bhi06G000030
Synteny	Bhi06G000030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAGTTAAATTTTCCGAAGGGAAAAAAAAAGGTAAAGAAACCTAAGAGCATCATTTCTGCTTCCTCTTCTCCCCTTCTCTCCCGTCAACCCTCCCGTGCAGTTCTTCTCCAGCAGGGGCCAACGAGTCTCCGACGGCGACGGTGTAGACAACGACGTGGGCATCCTTTTCTTTGGCAGCCTCTGACCATGCGCGAATGTGAGCTTTGGTGAATCGTCCTTGCACAACCTCACCAACGAGCAGCCCCAACGACCTGTCCTTGCGTATCACACCCACGCATTCACGTGCGATTGTCGACGATACCAGGTTCCTCTCCTTTTTGACGAGTTTCGGCATTGACCCACACTTCGATTGCCCTCAAATCAGTTTACCCACAATTTATAAGGCTCAGATTTGCAAGTTTGGATGCTTTCGAACACCAACCAGCATGGCTTGGAGCTTTTTCAATAAGATTCCGTAAGAATCATTGCTTTAATTTCCTTTTAGAATTGGATTTAAGTGTTCAAATGCTATTATGAACTCTTGGAACTCACCTGATGTTATGTTTGGATAAATTTTGAAGTGTTCGATTAAGGTTCAACAAGTTTTAACACATTTCGGACTAGTTCGGACTTGATTAAAGTATGTTAGAACAGTTTTTTTGAAAGTTTGTTGGTTGTAGTTTTGGACAAATTCGAAATGACTAATTAAGGTTTATGGTGAATTTTGGATAAGAATATTCCTTTTGTAAAATCTCTCGGTGTCCATTAAGGTTTTGAGTTCTATCATCTAAACATTATGTTTACCGCCTAGGCTTCTAAAAAGTTGATGTTTGTTCAAAGATGTGAATTTTTGTATTGAGAACTATAGTTTCCAAATCCCTTCCTCAATGTAAACTTTTGAGAAAGATATTGACTGCTGTGATTTGACAAATAGTTGAAGGCGTGTTTGGATTTTTGAAAGTATGTTTTATGTGGTTTGAGGGTCGAGTGAAAGTGTTCTGTATATTTTTAGTTCATTTTGTCAAATGAAAGTATGTGATTGATAAGGTCAGGCGGGTTGTCCTGTGAGATTAGTCGAGGTGCGTGTAAGTTGACTCAGGCACTCATAGATGATGAATGTCAAAAAAAAAAAGAAAGAAGAAGAAGAAGAAAGTATGTGATTGTTTTGAATGATAGTTGCAAGTGTTTCGTTTGATTTCAAACTGAAAGTTTTTTGTTTTAGTTTTGTTACTTCTGTAAACTGAAAGGTTTGAATGGTTTGATTTGATGATTTCTTCTAATGAAATTGCTATTTCAAATTACATGTTTTGTTTCAAATGTTCATAAATGATCTGATAGAGCTATCCTAATATGCTAAGTCTAATGACTGAAACTTATCTGTAAGAAGGCACCTTATAGTGGTTTGCATTACTTTGGAATGAAGATTCATGTGTGTATTATACTCATATGGCCTCACACTTCAGTAATTGAGTGTTGTTCTGATCAATTATTAATCGACATCTTTGATTGACTAAATGAATGAATAGTGTTACAAACGGGTAAGCACATATGTTGGGCTACTTGAACCATGCATCTTTCCCACTCTGTATTTGATAGTACTCAATGACTCAAAGCTCTATTGTACGAAAATATTGATTTGTTGAAAGCTTTGTATTTGAAAATATTGAAAGATTATTATTATTAAAAGTATGGAAGTATGGTTTATTAGAAGTGTTGAAAGTTTATTCGAATGTTTTGGTTTTGTTGAAAGACTACTTTAAAGTTTCAGCTTGAAACGTTTAGTTTTGAAAGCTTATTTTCTTGAAAGATTTTGATTTTGAAAGTACCATTTGTAGCAAAGTTTTGATAGAAAGTTCTGCAATGATTTGTATTTTTCATTTACAAAAGTTTTGAAAGAAAATTTCAAAGCTTGATATGGAAATTGCATACTAAGTATTTCTTACTCATTTTTGTTTTTCCAAAATGCTTTCAGATGAAAGGAAGTGAAGTTGGGCGTTCTAGTGCAGGACATCAAATGATGTTTCTCTTAGGATTGGATAGTTTGACTTAGAAATTGTTAGTAATAAGTTGCTTTTGTTGAAGTGTGTAAGTTGTAAAAGTTTCTAATTGTTATGCCTTTTGGATTTTTGTTATAATAATTGTATTGGAAAATACAGATTGTTACATTAAATTTCTCAGATCTCAATTTCTCTCTCAGCACAGTCAGGACTCTCAACTATTCTTTACTGTGAGGTATGTAAATCTTAAATTTGTTTTTTTTTTTGTTTTTGAAAAAAAAAATAATTGGGGTTTGATGTGTTTGTTTTGTCAGTTGTGTTTTGATCTTGTACCTAAATTTTGAAGGGTTGGGTCGGGTTAGGTTGAAGACCTTGTTCACATCTTTTTGGTAATTGTCTTCCATTCTAGGGCTTGCTCCAAACCTTTTCCCCTTTGGCATTATTTCGGGAAAATACAGTGTGAATATGGACGAAGACATGAAAGTTTCTCTTGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAGGAGACCGGTCTCGAACGATTTCCATTGTATGTTCCTTCTTGCCTGGTTATTTCCCCATTTTTTTTTAATTCCTGAGATAACCGAGGAAATATTAATTAGTTCATACGCACGTGAAGGTAGAAGAAGATATGTCTTAGTTGATGAACATCTGCTTGTGCTTTGACATTGTTAATTCTGATTATGTTTGTGTCTGTACATTGGTGATTGCTCGGAGTGAACTCTATCCAATTGATCCCATTCTGTTAAATTGACTAGAATCTAATCTTTAAATGTATTCTTTGATTTTCCTGGTAAAAGTTTATGCTCAATTTCCTTGATTAATTGAGATTGATTTGTGTTATATTGTTAACAGAGATGTTGGTTATGAAGAGAAACGGTTGTCACTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCGTGGCAATGGCAGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACCGTGAGTTTATATATCAAACGCCTCTGATTTGCTAGATTTTTTTACCATGCTGTTTTTTGTAAAAATAATGGCAAAACGGTGCTTGTATTAGTTTCAATCAATAAATGTGCATGCAAATGTGTCTTTTTTCTAAGAAAAAACGTGCGTGCAAATGTAGAGGCAAGTTGTGTTAGATTTTGCATTACAGATATGACTTTGGCATATTTTTCCTTTTTCGGGAAAGCATGGCACTGAAGTGTTATAGTCCTTTCGAACTTAAGTGCAAGGTGCAGTAAAGAGTGGGAAAAAAAAAACAAGATGCTCACTAGAAAATGCTAATAATTTTTTTTTTTTAATATGTAATAGTATTATGAATATTAAGATGATGAAAAGTTGAAAAAATTAGAGATTTTATTGGAGCTGTTGAGAAAAAACTAACACCATAAAAGAATATTTCTAGTTTCTTCGTTAAAAGTAATAAAAAGAGAATATTGGGCTGAGACGCATATCTCAAGTGTGCTTCATTAAGGGTGCCTTTTCTGGCAATTGTATGTAGGTGTAGTTTTCTAAACACAGTGTCTATGTACAGAGGATTCATAAACCTAAAAACTGTTCTTTAATTCTTATTAGCTTTATGGATATACATACAGTAACTACGTGTCTGACAAAATCATCTTGTTGACTTGAGTTTCTTATCCTAAGCTCTCTGTAAATAATGACCATTTCATCTCTTCTAGCGGTAGTTTTTGATGCTTTATTTTCTTTCTCATTCTCTCTTGCAAGAATTGGTTCGGAGAACAGGGGTTTGTCAATTTCATTATGGTGGAGATAGGATTAAACTGCTAATTGTCAGAATCTAGAAATTGTGATTACTTTTTCTCTGCTTGCTGTAATTGATTAGTTTTTTAATAAACTGGTTTCTTGAGAATATTCTATTTAGAGATATGGTGCCATTATAAATATAGTCTATCTTGATATAACTGTAGGTGGAAGCTAACGATGCAGTAACAGTGGCTGGGATGACAAGGCCAAAACCATTACCTAATGAAGTTTTATCAGATCTTGGAGTGTCTGTAGCAACGAAACTACAATGCTTTCGGGTACTATTTTTATCCTTCTTTTGTTCTCAGAAGTGATGCTTGGCTTACACCCTTATTGTCCTTATTCGATTAGCTTACTTTCATTGGGCTGGCACGACCTTGCTGTAAAGATTAATTGCCAGTACTGTTCAATTCAAATTTTATCTTATTATTTGTACTGTCATTTTAAAAGTGCCTGATTTTATCGCTTACCCCTTACTACAGCATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGACAGATTGCAAGGGAAGCGAGATTTTATGGTGCTTTAATTCGGTAATCAATTCTCTTCATTTATCCAACGATCATTGTGCAATGAATCTATGCTCATAATTGTATGTCATTTTGAATCTGGCCGTACATACACAGTAATATTCTTTAGAATCCATGAAGTGTCATTAAATTAAAAAGTTTTTATCAACAATAAATGATCGATGTCCTCTTGTCGCCACCAAAGAACACGATTGTGGATGAAACATAAAAGAATGATGTTTATGGATACGATCCGGAATATTAACTCTCCCATGCATCACCAACCAATCAAAGAACTTCGCTTGGTTGAGGATTTTAATCTTCTAAAGACAGGAGAAAGCATACGCAACTTGTGGGAGGAGGAAGTGAAACACAAAATGGGAAAAAATGATCTACAAGAAAATTCTTAAGAAGGATTACGGACCAAACCTGCCATACTAAAAGATTCTTAGTATAAATTATCCATTCTAGGTATTAATTGCCACAATGAAATCGACATTTGCGTTCAGGGCATTACTGCAAAGTTCTCCTTTTTGGATCCCAAGGTGGATAGCAGCAAAAGAATATGGTGATTTTTATTAAGGGCATGAAAATAACCCTTATTCAATCAGTTCTTTCCAATAATGTACTTTTGCAAAAAGCCACGAGAGACTTCTTATGAAAGGGTGTGTGAGCATTGAGCACTAATTAAGTGGCTTTGGACTTTGGAGACGAGATTCTGTTGGTAGCAATCTACTTTAGTGCATAAGATTATTGCAAGTAGATTTGGGGTTTAGTCCACTAGTTGGATTCCCAACTAGGCTCCATAAGTCTTCATCATAGTCCTACAAAGGCATTGCCATTGCTTAGGCTTCTTTTTTTAGTTGTTGAGCTTCTTTGCAAACGCAAAAGGGTAAGATTGTATAATCATTGTACTTTTCAATAAATCGATTGCTTCCTTGGAGGAGGTGATTTTCTACATTGTGTGGGATTGTGAAAGTTGGATCATTGGCAAGTTGGGATTCTTTCCATATCGCGTTTGAATGCAATAGAGGATCTTTTAAGTTATAGTGCTTCTTAACTGAAGCTGCTTTCAGTATAATGCCACTTTGGGCTTACAGCTTGCTAATTCATTATCAGGCATATACCTTACCTACTATTTTCTTTATAATTGAAAGTTTTTTCCTTTTATTTTGTGGGGATGGTAGCTTGAGAGGAGTAGTAGAATTTTTAGACAGGTTGAGAAAATAAAAGGAAAATAAAATATCAAGGGTGGTTGCTCCAGATTTTCCTTTGTATAGTATAGCTTTTGTTTAGCCTGCTAACTTAGTTTCATATGGGGCTTCTTCCTATCCCCCTGCCACTTTATAAGTTGCTCCTTCTCATATTATTTTTTTCTTTTTTTGTGGTTCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTCCTTTTTGTAATAACGCCTCATTCCTTACTAAAAATAAAACAACCTTTGGATTGTCCAAGGCTTAGCCTTCTTAATATCATGAGCTTGTTTTTTAATTCTTTCATATTGTTTCATTTAAAAATGGAAAATTTCCACCATTTGAAATTTAATATATCTTTTACTTTTGTGGTTACTTTATTTAGTATTGAATAAATCATAAATGCAAGTATACATTAATGTATTATAGTGCAATATATGTAGAAAAAATCGGAAATCTCTTGATGCTCTGAATGCTTTCCATTCTTCATATATTTTCAGTATTTGCTGATGATGTATATCAGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGAGTGGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATCGATTTATTTGACAATTCATCGTGTGATCCTTCGTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGAACATGATTCGTCTGGAATGCTGGCAATTAATTTACCGCCAAATTCATGCCACTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTCTGGAGCGTGGAAAAAATGAGTCTACAAATTCTTCCAATCAGTCTTCAATAAACAGGGAGAAGGAATTTACGAATGATGATGAGTACATTAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGTAGTTTCTTTAATACTTTGATCTTGCTCATTACAAGTCCTTGCTACTTTTGTTCCCTACCACATGACACCTTTTTTCTCCTGGCCCCAGGTGTTTGATTTGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTGATCTCTCTTGTGCCATCTGGTCAAAGTTGCCAAACAGTTGAAGGTGCAAATACCGGGATTCTGGATAATGCAAATTTACCTTTTGATTCGCTTGATGGGATTGAATTACCAGATAGAAGTGATCCCTTTGAAAAGAAATTGCGGAATCCTAATCACATAACCTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTGTTTGTAAGATCAAATGATAGACCATCAGCGTTAAGCAGGCAATCAGGTCAAGCTGCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTATCTCTGGCGCACAGAATGTTTGCAAACAATGTTCTCATGGAGCTTGAAAATGTGGTAAGGTCCTAATTTCTTAATAACTCGATTTCCGATGAAAACACACTGCTTCATAAAATTTAAGGGGAAAAGACTACAATAGTTATGATTTCTATATTTGACGTTACCAGCATATTAATCTTCTAGTTTATCTTTTGTTCATTCTCAGGTTTGGAAAGTCCCATTTCTTCAGTTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCATGGACATTTTTTATGGAAGTTCCTCGATCCATACTTCATCCTAATAGCATCCAGGCTCATACATCAGACAATCATCAGATGAATAATATAACCAAATCACAATTTCTGACTAAAGTAGTTGTGAATGATGATTGCATTACTATCGAAGGGGAAGGTGCACCTAATGTCGTTGGCTTGTTCAATGGAAATTCCAAGGATATCCATTCGATGAATAGATATGGTTGTGACTTGGCTGATCTTCCCGTTATAATTCTGTTGCAGGTGAGTCAAGTGGATTTCCTTGCTTCTGAGCTTCGATGTCAACAGTAATAGTATCATTGTGTTTCTGTAACAGGTTGCGAGCCAAATTATTCTTTGGCTTCATGAGGAAGCTCTAACTTGGGGAATAAAGGCCAACCGTGACTTCCTAAGTCTGTCATTTGAACTAGAACAAGGTGAAATACTCCGTCTGGTAGCCCATGTAGACCCAGATGATCCTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGTCTGATGGAGGACAAGAAACTTCATTTTGACAGTTCAGATGTTATACCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTAGAAGTTTTGCATTCAACACTAATGGATTTAGTTAGTTTGTGCAGTGGAGTTGGTAGTAGCCTATAACCATGCTTTTCTTGTCTGATATTACAAATAGAAATTGCATTAAGTTCCTGTAATTTCTGCCTCTTGTTTTTCTAATCTAATGATATCTTCAGTTTTTGTCTGCATTGCTTACTCAACATCATGTATTATTTATAAACTATGCAAAAATAGTGAATGTAGG

mRNA sequence

GAAAAAGTTAAATTTTCCGAAGGGAAAAAAAAAGGTAAAGAAACCTAAGAGCATCATTTCTGCTTCCTCTTCTCCCCTTCTCTCCCGTCAACCCTCCCGTGCAGTTCTTCTCCAGCAGGGGCCAACGAGTCTCCGACGGCGACGGTGTAGACAACGACGTGGGCATCCTTTTCTTTGGCAGCCTCTGACCATGCGCGAATGTGAGCTTTGGTGAATCGTCCTTGCACAACCTCACCAACGAGCAGCCCCAACGACCTGTCCTTGCGTATCACACCCACGCATTCACGTGCGATTGTCGACGATACCAGGTTCCTCTCCTTTTTGACGAGTTTCGGCATTGACCCACACTTCGATTGCCCTCAAATCAGTTTACCCACAATTTATAAGGCTCAGATTTGCAAGTTTGGATGCTTTCGAACACCAACCAGCATGGCTTGGAGCTTTTTCAATAAGATTCCATCTCAATTTCTCTCTCAGCACAGTCAGGACTCTCAACTATTCTTTACTGTGAGGGCTTGCTCCAAACCTTTTCCCCTTTGGCATTATTTCGGGAAAATACAGTGTGAATATGGACGAAGACATGAAAGTTTCTCTTGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAGGAGACCGGTCTCGAACGATTTCCATTAGATGTTGGTTATGAAGAGAAACGGTTGTCACTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCGTGGCAATGGCAGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACCGTGGAAGCTAACGATGCAGTAACAGTGGCTGGGATGACAAGGCCAAAACCATTACCTAATGAAGTTTTATCAGATCTTGGAGTGTCTGTAGCAACGAAACTACAATGCTTTCGGCATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGACAGATTGCAAGGGAAGCGAGATTTTATGGTGCTTTAATTCGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGAGTGGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATCGATTTATTTGACAATTCATCGTGTGATCCTTCGTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGAACATGATTCGTCTGGAATGCTGGCAATTAATTTACCGCCAAATTCATGCCACTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTCTGGAGCGTGGAAAAAATGAGTCTACAAATTCTTCCAATCAGTCTTCAATAAACAGGGAGAAGGAATTTACGAATGATGATGAGTACATTAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGTGTTTGATTTGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTGATCTCTCTTGTGCCATCTGGTCAAAGTTGCCAAACAGTTGAAGGTGCAAATACCGGGATTCTGGATAATGCAAATTTACCTTTTGATTCGCTTGATGGGATTGAATTACCAGATAGAAGTGATCCCTTTGAAAAGAAATTGCGGAATCCTAATCACATAACCTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTGTTTGTAAGATCAAATGATAGACCATCAGCGTTAAGCAGGCAATCAGGTCAAGCTGCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTATCTCTGGCGCACAGAATGTTTGCAAACAATGTTCTCATGGAGCTTGAAAATGTGGTTTGGAAAGTCCCATTTCTTCAGTTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCATGGACATTTTTTATGGAAGTTCCTCGATCCATACTTCATCCTAATAGCATCCAGGCTCATACATCAGACAATCATCAGATGAATAATATAACCAAATCACAATTTCTGACTAAAGTAGTTGTGAATGATGATTGCATTACTATCGAAGGGGAAGGTGCACCTAATGTCGTTGGCTTGTTCAATGGAAATTCCAAGGATATCCATTCGATGAATAGATATGGTTGTGACTTGGCTGATCTTCCCGTTATAATTCTGTTGCAGGTTGCGAGCCAAATTATTCTTTGGCTTCATGAGGAAGCTCTAACTTGGGGAATAAAGGCCAACCGTGACTTCCTAAGTCTGTCATTTGAACTAGAACAAGGTGAAATACTCCGTCTGGTAGCCCATGTAGACCCAGATGATCCTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGTCTGATGGAGGACAAGAAACTTCATTTTGACAGTTCAGATGTTATACCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTAGAAGTTTTGCATTCAACACTAATGGATTTAGTTAGTTTGTGCAGTGGAGTTGGTAGTAGCCTATAACCATGCTTTTCTTGTCTGATATTACAAATAGAAATTGCATTAAGTTCCTGTAATTTCTGCCTCTTGTTTTTCTAATCTAATGATATCTTCAGTTTTTGTCTGCATTGCTTACTCAACATCATGTATTATTTATAAACTATGCAAAAATAGTGAATGTAGG

Coding sequence (CDS)

ATGGACGAAGACATGAAAGTTTCTCTTGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAGGAGACCGGTCTCGAACGATTTCCATTAGATGTTGGTTATGAAGAGAAACGGTTGTCACTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCGTGGCAATGGCAGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACCGTGGAAGCTAACGATGCAGTAACAGTGGCTGGGATGACAAGGCCAAAACCATTACCTAATGAAGTTTTATCAGATCTTGGAGTGTCTGTAGCAACGAAACTACAATGCTTTCGGCATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGACAGATTGCAAGGGAAGCGAGATTTTATGGTGCTTTAATTCGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGAGTGGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATCGATTTATTTGACAATTCATCGTGTGATCCTTCGTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGAACATGATTCGTCTGGAATGCTGGCAATTAATTTACCGCCAAATTCATGCCACTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTCTGGAGCGTGGAAAAAATGAGTCTACAAATTCTTCCAATCAGTCTTCAATAAACAGGGAGAAGGAATTTACGAATGATGATGAGTACATTAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGTGTTTGATTTGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTGATCTCTCTTGTGCCATCTGGTCAAAGTTGCCAAACAGTTGAAGGTGCAAATACCGGGATTCTGGATAATGCAAATTTACCTTTTGATTCGCTTGATGGGATTGAATTACCAGATAGAAGTGATCCCTTTGAAAAGAAATTGCGGAATCCTAATCACATAACCTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTGTTTGTAAGATCAAATGATAGACCATCAGCGTTAAGCAGGCAATCAGGTCAAGCTGCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTATCTCTGGCGCACAGAATGTTTGCAAACAATGTTCTCATGGAGCTTGAAAATGTGGTTTGGAAAGTCCCATTTCTTCAGTTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCATGGACATTTTTTATGGAAGTTCCTCGATCCATACTTCATCCTAATAGCATCCAGGCTCATACATCAGACAATCATCAGATGAATAATATAACCAAATCACAATTTCTGACTAAAGTAGTTGTGAATGATGATTGCATTACTATCGAAGGGGAAGGTGCACCTAATGTCGTTGGCTTGTTCAATGGAAATTCCAAGGATATCCATTCGATGAATAGATATGGTTGTGACTTGGCTGATCTTCCCGTTATAATTCTGTTGCAGGTTGCGAGCCAAATTATTCTTTGGCTTCATGAGGAAGCTCTAACTTGGGGAATAAAGGCCAACCGTGACTTCCTAAGTCTGTCATTTGAACTAGAACAAGGTGAAATACTCCGTCTGGTAGCCCATGTAGACCCAGATGATCCTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGTCTGATGGAGGACAAGAAACTTCATTTTGACAGTTCAGATGTTATACCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTAGAAGTTTTGCATTCAACACTAATGGATTTAGTTAGTTTGTGCAGTGGAGTTGGTAGTAGCCTATAA

Protein sequence

MDEDMKVSLDKLPVKRLEAIEETGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQIAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVEHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERGKNESTNSSNQSSINREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVLISLVPSGQSCQTVEGANTGILDNANLPFDSLDGIELPDRSDPFEKKLRNPNHITFEIYLQQIFHELVFVRSNDRPSALSRQSGQAANDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQAHTSDNHQMNNITKSQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGEILRLVAHVDPDDPQGCLSWWLVMDDGLMEDKKLHFDSSDVIPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGSSL

Homology

[Close]

BLAST of Bhi06G000030 vs. TAIR 10
Match: AT5G20170.1 (RNA polymerase II transcription mediators )

HSP 1 Score: 726.1 bits (1873), Expect = 2.6e-209
Identity = 380/659 (57.66%), Postives = 497/659 (75.42%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEETGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDD--KK 60
           MD DM++SLD+LP+KRLE+IEE G ERFP DV Y++KR+SLIRRIDFAWA+E++D+  KK
Sbjct: 1   MDSDMEISLDRLPIKRLESIEENGAERFPSDVDYDDKRVSLIRRIDFAWALEEEDELKKK 60

Query: 61  KQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEV 120
           KQKKSSK+S   W+W+ M+ENLQLAHQEL+VIIDLI+TV+ANDAVTVAGMTRPKP+PNE+
Sbjct: 61  KQKKSSKDSVEQWKWKGMVENLQLAHQELTVIIDLIDTVQANDAVTVAGMTRPKPMPNEI 120

Query: 121 LSDLGVSVATKLQCFRHLGKYFKQSAKGLERQIAREARFYGALIRLQQNWKVKRQRVAAP 180
           LSDL VS ATKLQ +R+LG YFKQSAK LE++I REARFYGALIRLQ+NWKVKRQR+ A 
Sbjct: 121 LSDLAVSTATKLQGYRNLGNYFKQSAKALEQKINREARFYGALIRLQRNWKVKRQRMLAS 180

Query: 181 APANEGFTIDLFDNSSCDPSSVFRPSS-STIRVEHDSSGMLAINLPPNSCHSLRFGFLSG 240
             +NEGFTIDL D+S  DP+S FRPS+ STIRV+HDS+GMLAIN+P +S +SLRFG++  
Sbjct: 181 NASNEGFTIDLSDSSLYDPTSGFRPSTLSTIRVDHDSAGMLAINVPQDSWYSLRFGYVGL 240

Query: 241 CNVENPLERGKNESTNSSNQSSINREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN 300
             + N  E  ++  + + +      EK   +DD+Y+KET+SLLR+VH +IF+EQ+FD++N
Sbjct: 241 NPIGNSNESDEHIDSTTGHDIPGTSEKLSASDDKYVKETHSLLREVHKSIFAEQLFDMLN 300

Query: 301 REAFNPSLGINVTGIRENYLQLSIDQGTSVLISLVPSGQSCQTVEGANTGILDNANLPFD 360
           REAFN  +G N++G+REN++++SI QG S+ +SL PSG++    +       ++A L  +
Sbjct: 301 REAFNEGVGFNISGLRENFMEMSIGQGASLFVSLHPSGKNPSIKKS------ESATLLIE 360

Query: 361 SLDGIELPDRSDPFEKKLRNPNHITFEIYLQQIFHELVFVRSNDRPSALS-RQSGQAAND 420
           S   +E  +  D   KKL  PN  ++EIYLQQIFHE  F ++ D+  + S R S Q   D
Sbjct: 361 SSGRVEPAEGGDYRLKKLGFPNRTSYEIYLQQIFHEHAFGKAKDQLKSKSIRASNQTEKD 420

Query: 421 -GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRS 480
             SGLL HFCLSL HR+F+N VL+ LE+VV KVP+L LISHPTWNSR SSWT FM VP S
Sbjct: 421 SNSGLLDHFCLSLTHRIFSNRVLVHLESVVCKVPYLHLISHPTWNSRTSSWTVFMTVPPS 480

Query: 481 ILHPNSIQAHTSDNHQMNNITKSQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSM 540
           I+     +  + D  +     K+QF TKVVV DDCI++E E  PNVVGL   +S ++ S+
Sbjct: 481 IIPQGRSETQSPDGKRN---LKTQFRTKVVVKDDCISVEAECTPNVVGLLKSSSCNLFSI 540

Query: 541 NRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGEILRLVAHV 600
           N+Y CD+ADLPV+IL QVASQI+ WL EEA T G KA+R+FLSLS E+ +GE + LVAHV
Sbjct: 541 NKYECDVADLPVMILQQVASQIVCWLLEEARTVGTKASREFLSLSLEIVEGERVSLVAHV 600

Query: 601 DPDDPQGCLSWWLVMDDGLMEDKKLHFDSSDVIPEYRKFLGHLSLEVLHSTLMDLVSLC 655
           +P+D +GC+SWWLVM++G  E++       + + E RK LGHLSL+VL+S LMDL++LC
Sbjct: 601 NPEDAKGCISWWLVMENGCTEER-------EGVSESRKLLGHLSLDVLYSVLMDLINLC 643

[Close]

BLAST of Bhi06G000030 vs. ExPASy Swiss-Prot
Match: F4K460 (Mediator of RNA polymerase II transcription subunit 17 OS=Arabidopsis thaliana OX=3702 GN=MED17 PE=1 SV=1)

HSP 1 Score: 726.1 bits (1873), Expect = 3.6e-208
Identity = 380/659 (57.66%), Postives = 497/659 (75.42%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEETGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDD--KK 60
           MD DM++SLD+LP+KRLE+IEE G ERFP DV Y++KR+SLIRRIDFAWA+E++D+  KK
Sbjct: 1   MDSDMEISLDRLPIKRLESIEENGAERFPSDVDYDDKRVSLIRRIDFAWALEEEDELKKK 60

Query: 61  KQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEV 120
           KQKKSSK+S   W+W+ M+ENLQLAHQEL+VIIDLI+TV+ANDAVTVAGMTRPKP+PNE+
Sbjct: 61  KQKKSSKDSVEQWKWKGMVENLQLAHQELTVIIDLIDTVQANDAVTVAGMTRPKPMPNEI 120

Query: 121 LSDLGVSVATKLQCFRHLGKYFKQSAKGLERQIAREARFYGALIRLQQNWKVKRQRVAAP 180
           LSDL VS ATKLQ +R+LG YFKQSAK LE++I REARFYGALIRLQ+NWKVKRQR+ A 
Sbjct: 121 LSDLAVSTATKLQGYRNLGNYFKQSAKALEQKINREARFYGALIRLQRNWKVKRQRMLAS 180

Query: 181 APANEGFTIDLFDNSSCDPSSVFRPSS-STIRVEHDSSGMLAINLPPNSCHSLRFGFLSG 240
             +NEGFTIDL D+S  DP+S FRPS+ STIRV+HDS+GMLAIN+P +S +SLRFG++  
Sbjct: 181 NASNEGFTIDLSDSSLYDPTSGFRPSTLSTIRVDHDSAGMLAINVPQDSWYSLRFGYVGL 240

Query: 241 CNVENPLERGKNESTNSSNQSSINREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN 300
             + N  E  ++  + + +      EK   +DD+Y+KET+SLLR+VH +IF+EQ+FD++N
Sbjct: 241 NPIGNSNESDEHIDSTTGHDIPGTSEKLSASDDKYVKETHSLLREVHKSIFAEQLFDMLN 300

Query: 301 REAFNPSLGINVTGIRENYLQLSIDQGTSVLISLVPSGQSCQTVEGANTGILDNANLPFD 360
           REAFN  +G N++G+REN++++SI QG S+ +SL PSG++    +       ++A L  +
Sbjct: 301 REAFNEGVGFNISGLRENFMEMSIGQGASLFVSLHPSGKNPSIKKS------ESATLLIE 360

Query: 361 SLDGIELPDRSDPFEKKLRNPNHITFEIYLQQIFHELVFVRSNDRPSALS-RQSGQAAND 420
           S   +E  +  D   KKL  PN  ++EIYLQQIFHE  F ++ D+  + S R S Q   D
Sbjct: 361 SSGRVEPAEGGDYRLKKLGFPNRTSYEIYLQQIFHEHAFGKAKDQLKSKSIRASNQTEKD 420

Query: 421 -GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRS 480
             SGLL HFCLSL HR+F+N VL+ LE+VV KVP+L LISHPTWNSR SSWT FM VP S
Sbjct: 421 SNSGLLDHFCLSLTHRIFSNRVLVHLESVVCKVPYLHLISHPTWNSRTSSWTVFMTVPPS 480

Query: 481 ILHPNSIQAHTSDNHQMNNITKSQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSM 540
           I+     +  + D  +     K+QF TKVVV DDCI++E E  PNVVGL   +S ++ S+
Sbjct: 481 IIPQGRSETQSPDGKRN---LKTQFRTKVVVKDDCISVEAECTPNVVGLLKSSSCNLFSI 540

Query: 541 NRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGEILRLVAHV 600
           N+Y CD+ADLPV+IL QVASQI+ WL EEA T G KA+R+FLSLS E+ +GE + LVAHV
Sbjct: 541 NKYECDVADLPVMILQQVASQIVCWLLEEARTVGTKASREFLSLSLEIVEGERVSLVAHV 600

Query: 601 DPDDPQGCLSWWLVMDDGLMEDKKLHFDSSDVIPEYRKFLGHLSLEVLHSTLMDLVSLC 655
           +P+D +GC+SWWLVM++G  E++       + + E RK LGHLSL+VL+S LMDL++LC
Sbjct: 601 NPEDAKGCISWWLVMENGCTEER-------EGVSESRKLLGHLSLDVLYSVLMDLINLC 643

[Close]

BLAST of Bhi06G000030 vs. ExPASy TrEMBL
Match: A0A0A0KXX2 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis sativus OX=3659 GN=MED17 PE=3 SV=1)

HSP 1 Score: 1245.3 bits (3221), Expect = 0.0e+00
Identity = 620/662 (93.66%), Postives = 644/662 (97.28%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEETGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDEDMKVSLDKLPVKRLEAIEE GLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ
Sbjct: 1   MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60

Query: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
           KKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVL+
Sbjct: 61  KKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQIAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQ+AREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVEHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDNSSCDPSSVFRPSSSTIRV+HDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240

Query: 241 ENPLERGKNESTNSSNQSSINREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA 300
           ENPLER KNESTN SNQSS+NREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN+EA
Sbjct: 241 ENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA 300

Query: 301 FNPSLGINVTGIRENYLQLSIDQGTSVLISLVPSGQSCQTVEGANTGILDNANLPFDSLD 360
           FNPS+GINVTGIRENYLQLSIDQGTSV ISLVPSGQS QTVEGAN+ IL+NA+LPFDSLD
Sbjct: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLD 360

Query: 361 GIELPDRSDPFEKKLRNPNHITFEIYLQQIFHELVFVRSNDRP-SALSRQSGQAANDGSG 420
           GIELPDRSDP EKKLRNPNHITFEIYLQQIFHELVFV+SNDRP S+LSRQSGQ +NDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420

Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP 480
           LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILHP
Sbjct: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHP 480

Query: 481 NSIQAHTSDNHQMNNITKSQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYG 540
           NSI+A TSD +QMNN+TK+QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+S NRY 
Sbjct: 481 NSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYS 540

Query: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGEILRLVAHVDPDD 600
           CDLADLPVIILLQVASQIILWLHEEAL WGIKANRDFLSLSFELEQGE LRLVAHVDP+D
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600

Query: 601 PQGCLSWWLVMDDGLMEDKKLHFDSSDVIPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGS 660
           PQGCLSWWLVMDDGLMED+KL+F++SDV+PEYRKFLGHLSLEVLHSTLMDLVSLCSGVG 
Sbjct: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660

Query: 661 SL 662
           SL
Sbjct: 661 SL 662

[Close]

BLAST of Bhi06G000030 vs. ExPASy TrEMBL
Match: A0A1S4E2I2 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo OX=3656 GN=LOC103498687 PE=3 SV=1)

HSP 1 Score: 1244.2 bits (3218), Expect = 0.0e+00
Identity = 616/662 (93.05%), Postives = 643/662 (97.13%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEETGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDED+KVSLDKLP+KRLEAIEE GLERFP DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQ
Sbjct: 1   MDEDLKVSLDKLPIKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQ 60

Query: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
           KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVL+
Sbjct: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQIAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQ+AREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVEHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDNSSCDPSSVFRPSSSTIRV+HDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240

Query: 241 ENPLERGKNESTNSSNQSSINREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA 300
           ENPLE  KN++TN SNQ+S+ REKEFTNDDEYIKETNSLLRQVHHAIF EQVFDLVN EA
Sbjct: 241 ENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA 300

Query: 301 FNPSLGINVTGIRENYLQLSIDQGTSVLISLVPSGQSCQTVEGANTGILDNANLPFDSLD 360
           FNPS+GINVTGIRENYLQLSIDQGTSV ISLVPSGQSCQTVEGAN+ ILDNANLPFDSLD
Sbjct: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLD 360

Query: 361 GIELPDRSDPFEKKLRNPNHITFEIYLQQIFHELVFVRSNDRP-SALSRQSGQAANDGSG 420
           GIELPDRSDP EKKLRNPNHITFEIYLQQIFHELVFV+SNDRP S+LSRQSGQ +NDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420

Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP 480
           LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP
Sbjct: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP 480

Query: 481 NSIQAHTSDNHQMNNITKSQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYG 540
           NSIQA TSD++QMNN+TK+QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+  NRY 
Sbjct: 481 NSIQARTSDSYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYLTNRYS 540

Query: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGEILRLVAHVDPDD 600
           CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGE LRLVAHVDP+D
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600

Query: 601 PQGCLSWWLVMDDGLMEDKKLHFDSSDVIPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGS 660
           PQGCLSWWLVMDDGLMED+KL+F++SDV+PEYRKFLG+LSLEVLHSTLMDLVSLCSGVG 
Sbjct: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGG 660

Query: 661 SL 662
           SL
Sbjct: 661 SL 662

[Close]

BLAST of Bhi06G000030 vs. ExPASy TrEMBL
Match: A0A5D3BMZ9 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo var. makuwa OX=1194695 GN=MED17 PE=3 SV=1)

HSP 1 Score: 1244.2 bits (3218), Expect = 0.0e+00
Identity = 616/662 (93.05%), Postives = 643/662 (97.13%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEETGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDED+KVSLDKLP+KRLEAIEE GLERFP DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQ
Sbjct: 1   MDEDLKVSLDKLPIKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQ 60

Query: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
           KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVL+
Sbjct: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQIAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQ+AREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVEHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDNSSCDPSSVFRPSSSTIRV+HDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240

Query: 241 ENPLERGKNESTNSSNQSSINREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA 300
           ENPLE  KN++TN SNQ+S+ REKEFTNDDEYIKETNSLLRQVHHAIF EQVFDLVN EA
Sbjct: 241 ENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA 300

Query: 301 FNPSLGINVTGIRENYLQLSIDQGTSVLISLVPSGQSCQTVEGANTGILDNANLPFDSLD 360
           FNPS+GINVTGIRENYLQLSIDQGTSV ISLVPSGQSCQTVEGAN+ ILDNANLPFDSLD
Sbjct: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLD 360

Query: 361 GIELPDRSDPFEKKLRNPNHITFEIYLQQIFHELVFVRSNDRP-SALSRQSGQAANDGSG 420
           GIELPDRSDP EKKLRNPNHITFEIYLQQIFHELVFV+SNDRP S+LSRQSGQ +NDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420

Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP 480
           LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP
Sbjct: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP 480

Query: 481 NSIQAHTSDNHQMNNITKSQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYG 540
           NSIQA TSD++QMNN+TK+QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+  NRY 
Sbjct: 481 NSIQARTSDSYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYLTNRYS 540

Query: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGEILRLVAHVDPDD 600
           CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGE LRLVAHVDP+D
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600

Query: 601 PQGCLSWWLVMDDGLMEDKKLHFDSSDVIPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGS 660
           PQGCLSWWLVMDDGLMED+KL+F++SDV+PEYRKFLG+LSLEVLHSTLMDLVSLCSGVG 
Sbjct: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGG 660

Query: 661 SL 662
           SL
Sbjct: 661 SL 662

[Close]

BLAST of Bhi06G000030 vs. ExPASy TrEMBL
Match: A0A5A7TDC1 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G00600 PE=3 SV=1)

HSP 1 Score: 1239.6 bits (3206), Expect = 0.0e+00
Identity = 616/663 (92.91%), Postives = 643/663 (96.98%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEETGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDED+KVSLDKLP+KRLEAIEE GLERFP DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQ
Sbjct: 1   MDEDLKVSLDKLPIKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQ 60

Query: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
           KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVL+
Sbjct: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQIAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQ+AREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVEHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDNSSCDPSSVFRPSSSTIRV+HDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240

Query: 241 ENPLERGKNESTNSSNQSSINREKEFTNDDEYIKETNSLLRQVHHAIFSEQ-VFDLVNRE 300
           ENPLE  KN++TN SNQ+S+ REKEFTNDDEYIKETNSLLRQVHHAIF EQ VFDLVN E
Sbjct: 241 ENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVVFDLVNHE 300

Query: 301 AFNPSLGINVTGIRENYLQLSIDQGTSVLISLVPSGQSCQTVEGANTGILDNANLPFDSL 360
           AFNPS+GINVTGIRENYLQLSIDQGTSV ISLVPSGQSCQTVEGAN+ ILDNANLPFDSL
Sbjct: 301 AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSL 360

Query: 361 DGIELPDRSDPFEKKLRNPNHITFEIYLQQIFHELVFVRSNDRP-SALSRQSGQAANDGS 420
           DGIELPDRSDP EKKLRNPNHITFEIYLQQIFHELVFV+SNDRP S+LSRQSGQ +NDGS
Sbjct: 361 DGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGS 420

Query: 421 GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILH 480
           GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILH
Sbjct: 421 GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILH 480

Query: 481 PNSIQAHTSDNHQMNNITKSQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRY 540
           PNSIQA TSD++QMNN+TK+QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+  NRY
Sbjct: 481 PNSIQARTSDSYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYLTNRY 540

Query: 541 GCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGEILRLVAHVDPD 600
            CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGE LRLVAHVDP+
Sbjct: 541 SCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE 600

Query: 601 DPQGCLSWWLVMDDGLMEDKKLHFDSSDVIPEYRKFLGHLSLEVLHSTLMDLVSLCSGVG 660
           DPQGCLSWWLVMDDGLMED+KL+F++SDV+PEYRKFLG+LSLEVLHSTLMDLVSLCSGVG
Sbjct: 601 DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVG 660

Query: 661 SSL 662
            SL
Sbjct: 661 GSL 663

[Close]

BLAST of Bhi06G000030 vs. ExPASy TrEMBL
Match: A0A6J1JAW7 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucurbita maxima OX=3661 GN=LOC111485135 PE=3 SV=1)

HSP 1 Score: 1206.4 bits (3120), Expect = 0.0e+00
Identity = 602/662 (90.94%), Postives = 631/662 (95.32%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEETGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MD DMKVSLDKLPVKRLEAIEE GLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ
Sbjct: 1   MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60

Query: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
           KK+SKES+TPWQWQ+MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS
Sbjct: 61  KKTSKESATPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQIAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQ+AREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVEHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDN SCDPSSVFRPSSSTIRV+ DSSGMLAI+LPPN+CHSL FGFLSGCN+
Sbjct: 181 ANEGFTIDLFDNLSCDPSSVFRPSSSTIRVDRDSSGMLAISLPPNTCHSLCFGFLSGCNM 240

Query: 241 ENPLERGKNESTNSSNQSSINREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA 300
           ENPLERGKNESTNSSNQS I  EKEFTNDDEYIKETNSLLRQVHHAIFSEQVFD VNREA
Sbjct: 241 ENPLERGKNESTNSSNQSPIESEKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDFVNREA 300

Query: 301 FNPSLGINVTGIRENYLQLSIDQGTSVLISLVPSGQSCQTVEGANTGILDNANLPFDSLD 360
           FNPSLGINVTGIRENYLQLSIDQGTSV ISLVP+GQSCQTVE ANTGILDN NLPFDSLD
Sbjct: 301 FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSCQTVEDANTGILDNTNLPFDSLD 360

Query: 361 GIELPDRSDPFEKKLRNPNHITFEIYLQQIFHELVFVRSNDRP-SALSRQSGQAANDGSG 420
           GIELPDRSDP EKKLRNPN+ TFEIYLQQIFHELVFV+SND+P S+LSRQSGQ +NDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSNDKPISSLSRQSGQPSNDGSG 420

Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP 480
           LLGHFCLSLAHR+FAN VLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP+S LHP
Sbjct: 421 LLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHP 480

Query: 481 NSIQAHTSDNHQMNNITKSQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYG 540
            SIQA TSD+H+MN++TKSQF TKVVVNDDCITIEGEGAP+VVGLF GNSKD++SMNRYG
Sbjct: 481 PSIQARTSDSHKMNSVTKSQFQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYG 540

Query: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGEILRLVAHVDPDD 600
           CDLADLPVIILLQVASQIILWLHEEALTWGIK +RDFLSLSFELEQGE LRLVAHVDP+D
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED 600

Query: 601 PQGCLSWWLVMDDGLMEDKKLHFDSSDVIPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGS 660
            QGCLSWWLVMDDGLMED+K +F+ SDV+PEYRKFLGHLSLEVL STLMDLVSLCSG G 
Sbjct: 601 AQGCLSWWLVMDDGLMEDRKHNFNISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGG 660

Query: 661 SL 662
           SL
Sbjct: 661 SL 662

The following BLAST results are available for this feature:

BLAST of Bhi06G000030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20170.1	2.6e-209	57.66	RNA polymerase II transcription mediators	[more]

BLAST of Bhi06G000030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K460	3.6e-208	57.66	Mediator of RNA polymerase II transcription subunit 17 OS=Arabidopsis thaliana O...	[more]

BLAST of Bhi06G000030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXX2	0.0e+00	93.66	Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis sativus OX=365...	[more]
A0A1S4E2I2	0.0e+00	93.05	Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo OX=3656 G...	[more]
A0A5D3BMZ9	0.0e+00	93.05	Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo var. maku...	[more]
A0A5A7TDC1	0.0e+00	92.91	Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo var. maku...	[more]
A0A6J1JAW7	0.0e+00	90.94	Mediator of RNA polymerase II transcription subunit 17 OS=Cucurbita maxima OX=36...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019313	Mediator complex, subunit Med17	PFAM	PF10156	Med17	coord: 56..334 e-value: 6.8E-5 score: 21.8
IPR019313	Mediator complex, subunit Med17	PANTHER	PTHR13114	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 17	coord: 1..652
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..264

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M000030	Bhi06M000030	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0070847	core mediator complex
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003712	transcription coregulator activity