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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. GAAAAAGTTAAATTTTCCGAAGGGAAAAAAAAAGGTAAAGAAACCTAAGAGCATCATTTCTGCTTCCTCTTCTCCCCTTCTCTCCCGTCAACCCTCCCGTGCAGTTCTTCTCCAGCAGGGGCCAACGAGTCTCCGACGGCGACGGTGTAGACAACGACGTGGGCATCCTTTTCTTTGGCAGCCTCTGACCATGCGCGAATGTGAGCTTTGGTGAATCGTCCTTGCACAACCTCACCAACGAGCAGCCCCAACGACCTGTCCTTGCGTATCACACCCACGCATTCACGTGCGATTGTCGACGATACCAGGTTCCTCTCCTTTTTGACGAGTTTCGGCATTGACCCACACTTCGATTGCCCTCAAATCAGTTTACCCACAATTTATAAGGCTCAGATTTGCAAGTTTGGATGCTTTCGAACACCAACCAGCATGGCTTGGAGCTTTTTCAATAAGATTCCGTAAGAATCATTGCTTTAATTTCCTTTTAGAATTGGATTTAAGTGTTCAAATGCTATTATGAACTCTTGGAACTCACCTGATGTTATGTTTGGATAAATTTTGAAGTGTTCGATTAAGGTTCAACAAGTTTTAACACATTTCGGACTAGTTCGGACTTGATTAAAGTATGTTAGAACAGTTTTTTTGAAAGTTTGTTGGTTGTAGTTTTGGACAAATTCGAAATGACTAATTAAGGTTTATGGTGAATTTTGGATAAGAATATTCCTTTTGTAAAATCTCTCGGTGTCCATTAAGGTTTTGAGTTCTATCATCTAAACATTATGTTTACCGCCTAGGCTTCTAAAAAGTTGATGTTTGTTCAAAGATGTGAATTTTTGTATTGAGAACTATAGTTTCCAAATCCCTTCCTCAATGTAAACTTTTGAGAAAGATATTGACTGCTGTGATTTGACAAATAGTTGAAGGCGTGTTTGGATTTTTGAAAGTATGTTTTATGTGGTTTGAGGGTCGAGTGAAAGTGTTCTGTATATTTTTAGTTCATTTTGTCAAATGAAAGTATGTGATTGATAAGGTCAGGCGGGTTGTCCTGTGAGATTAGTCGAGGTGCGTGTAAGTTGACTCAGGCACTCATAGATGATGAATGTCAAAAAAAAAAAGAAAGAAGAAGAAGAAGAAAGTATGTGATTGTTTTGAATGATAGTTGCAAGTGTTTCGTTTGATTTCAAACTGAAAGTTTTTTGTTTTAGTTTTGTTACTTCTGTAAACTGAAAGGTTTGAATGGTTTGATTTGATGATTTCTTCTAATGAAATTGCTATTTCAAATTACATGTTTTGTTTCAAATGTTCATAAATGATCTGATAGAGCTATCCTAATATGCTAAGTCTAATGACTGAAACTTATCTGTAAGAAGGCACCTTATAGTGGTTTGCATTACTTTGGAATGAAGATTCATGTGTGTATTATACTCATATGGCCTCACACTTCAGTAATTGAGTGTTGTTCTGATCAATTATTAATCGACATCTTTGATTGACTAAATGAATGAATAGTGTTACAAACGGGTAAGCACATATGTTGGGCTACTTGAACCATGCATCTTTCCCACTCTGTATTTGATAGTACTCAATGACTCAAAGCTCTATTGTACGAAAATATTGATTTGTTGAAAGCTTTGTATTTGAAAATATTGAAAGATTATTATTATTAAAAGTATGGAAGTATGGTTTATTAGAAGTGTTGAAAGTTTATTCGAATGTTTTGGTTTTGTTGAAAGACTACTTTAAAGTTTCAGCTTGAAACGTTTAGTTTTGAAAGCTTATTTTCTTGAAAGATTTTGATTTTGAAAGTACCATTTGTAGCAAAGTTTTGATAGAAAGTTCTGCAATGATTTGTATTTTTCATTTACAAAAGTTTTGAAAGAAAATTTCAAAGCTTGATATGGAAATTGCATACTAAGTATTTCTTACTCATTTTTGTTTTTCCAAAATGCTTTCAGATGAAAGGAAGTGAAGTTGGGCGTTCTAGTGCAGGACATCAAATGATGTTTCTCTTAGGATTGGATAGTTTGACTTAGAAATTGTTAGTAATAAGTTGCTTTTGTTGAAGTGTGTAAGTTGTAAAAGTTTCTAATTGTTATGCCTTTTGGATTTTTGTTATAATAATTGTATTGGAAAATACAGATTGTTACATTAAATTTCTCAGATCTCAATTTCTCTCTCAGCACAGTCAGGACTCTCAACTATTCTTTACTGTGAGGTATGTAAATCTTAAATTTGTTTTTTTTTTTGTTTTTGAAAAAAAAAATAATTGGGGTTTGATGTGTTTGTTTTGTCAGTTGTGTTTTGATCTTGTACCTAAATTTTGAAGGGTTGGGTCGGGTTAGGTTGAAGACCTTGTTCACATCTTTTTGGTAATTGTCTTCCATTCTAGGGCTTGCTCCAAACCTTTTCCCCTTTGGCATTATTTCGGGAAAATACAGTGTGAATATGGACGAAGACATGAAAGTTTCTCTTGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAGGAGACCGGTCTCGAACGATTTCCATTGTATGTTCCTTCTTGCCTGGTTATTTCCCCATTTTTTTTTAATTCCTGAGATAACCGAGGAAATATTAATTAGTTCATACGCACGTGAAGGTAGAAGAAGATATGTCTTAGTTGATGAACATCTGCTTGTGCTTTGACATTGTTAATTCTGATTATGTTTGTGTCTGTACATTGGTGATTGCTCGGAGTGAACTCTATCCAATTGATCCCATTCTGTTAAATTGACTAGAATCTAATCTTTAAATGTATTCTTTGATTTTCCTGGTAAAAGTTTATGCTCAATTTCCTTGATTAATTGAGATTGATTTGTGTTATATTGTTAACAGAGATGTTGGTTATGAAGAGAAACGGTTGTCACTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCGTGGCAATGGCAGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACCGTGAGTTTATATATCAAACGCCTCTGATTTGCTAGATTTTTTTACCATGCTGTTTTTTGTAAAAATAATGGCAAAACGGTGCTTGTATTAGTTTCAATCAATAAATGTGCATGCAAATGTGTCTTTTTTCTAAGAAAAAACGTGCGTGCAAATGTAGAGGCAAGTTGTGTTAGATTTTGCATTACAGATATGACTTTGGCATATTTTTCCTTTTTCGGGAAAGCATGGCACTGAAGTGTTATAGTCCTTTCGAACTTAAGTGCAAGGTGCAGTAAAGAGTGGGAAAAAAAAAACAAGATGCTCACTAGAAAATGCTAATAATTTTTTTTTTTTAATATGTAATAGTATTATGAATATTAAGATGATGAAAAGTTGAAAAAATTAGAGATTTTATTGGAGCTGTTGAGAAAAAACTAACACCATAAAAGAATATTTCTAGTTTCTTCGTTAAAAGTAATAAAAAGAGAATATTGGGCTGAGACGCATATCTCAAGTGTGCTTCATTAAGGGTGCCTTTTCTGGCAATTGTATGTAGGTGTAGTTTTCTAAACACAGTGTCTATGTACAGAGGATTCATAAACCTAAAAACTGTTCTTTAATTCTTATTAGCTTTATGGATATACATACAGTAACTACGTGTCTGACAAAATCATCTTGTTGACTTGAGTTTCTTATCCTAAGCTCTCTGTAAATAATGACCATTTCATCTCTTCTAGCGGTAGTTTTTGATGCTTTATTTTCTTTCTCATTCTCTCTTGCAAGAATTGGTTCGGAGAACAGGGGTTTGTCAATTTCATTATGGTGGAGATAGGATTAAACTGCTAATTGTCAGAATCTAGAAATTGTGATTACTTTTTCTCTGCTTGCTGTAATTGATTAGTTTTTTAATAAACTGGTTTCTTGAGAATATTCTATTTAGAGATATGGTGCCATTATAAATATAGTCTATCTTGATATAACTGTAGGTGGAAGCTAACGATGCAGTAACAGTGGCTGGGATGACAAGGCCAAAACCATTACCTAATGAAGTTTTATCAGATCTTGGAGTGTCTGTAGCAACGAAACTACAATGCTTTCGGGTACTATTTTTATCCTTCTTTTGTTCTCAGAAGTGATGCTTGGCTTACACCCTTATTGTCCTTATTCGATTAGCTTACTTTCATTGGGCTGGCACGACCTTGCTGTAAAGATTAATTGCCAGTACTGTTCAATTCAAATTTTATCTTATTATTTGTACTGTCATTTTAAAAGTGCCTGATTTTATCGCTTACCCCTTACTACAGCATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGACAGATTGCAAGGGAAGCGAGATTTTATGGTGCTTTAATTCGGTAATCAATTCTCTTCATTTATCCAACGATCATTGTGCAATGAATCTATGCTCATAATTGTATGTCATTTTGAATCTGGCCGTACATACACAGTAATATTCTTTAGAATCCATGAAGTGTCATTAAATTAAAAAGTTTTTATCAACAATAAATGATCGATGTCCTCTTGTCGCCACCAAAGAACACGATTGTGGATGAAACATAAAAGAATGATGTTTATGGATACGATCCGGAATATTAACTCTCCCATGCATCACCAACCAATCAAAGAACTTCGCTTGGTTGAGGATTTTAATCTTCTAAAGACAGGAGAAAGCATACGCAACTTGTGGGAGGAGGAAGTGAAACACAAAATGGGAAAAAATGATCTACAAGAAAATTCTTAAGAAGGATTACGGACCAAACCTGCCATACTAAAAGATTCTTAGTATAAATTATCCATTCTAGGTATTAATTGCCACAATGAAATCGACATTTGCGTTCAGGGCATTACTGCAAAGTTCTCCTTTTTGGATCCCAAGGTGGATAGCAGCAAAAGAATATGGTGATTTTTATTAAGGGCATGAAAATAACCCTTATTCAATCAGTTCTTTCCAATAATGTACTTTTGCAAAAAGCCACGAGAGACTTCTTATGAAAGGGTGTGTGAGCATTGAGCACTAATTAAGTGGCTTTGGACTTTGGAGACGAGATTCTGTTGGTAGCAATCTACTTTAGTGCATAAGATTATTGCAAGTAGATTTGGGGTTTAGTCCACTAGTTGGATTCCCAACTAGGCTCCATAAGTCTTCATCATAGTCCTACAAAGGCATTGCCATTGCTTAGGCTTCTTTTTTTAGTTGTTGAGCTTCTTTGCAAACGCAAAAGGGTAAGATTGTATAATCATTGTACTTTTCAATAAATCGATTGCTTCCTTGGAGGAGGTGATTTTCTACATTGTGTGGGATTGTGAAAGTTGGATCATTGGCAAGTTGGGATTCTTTCCATATCGCGTTTGAATGCAATAGAGGATCTTTTAAGTTATAGTGCTTCTTAACTGAAGCTGCTTTCAGTATAATGCCACTTTGGGCTTACAGCTTGCTAATTCATTATCAGGCATATACCTTACCTACTATTTTCTTTATAATTGAAAGTTTTTTCCTTTTATTTTGTGGGGATGGTAGCTTGAGAGGAGTAGTAGAATTTTTAGACAGGTTGAGAAAATAAAAGGAAAATAAAATATCAAGGGTGGTTGCTCCAGATTTTCCTTTGTATAGTATAGCTTTTGTTTAGCCTGCTAACTTAGTTTCATATGGGGCTTCTTCCTATCCCCCTGCCACTTTATAAGTTGCTCCTTCTCATATTATTTTTTTCTTTTTTTGTGGTTCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTCCTTTTTGTAATAACGCCTCATTCCTTACTAAAAATAAAACAACCTTTGGATTGTCCAAGGCTTAGCCTTCTTAATATCATGAGCTTGTTTTTTAATTCTTTCATATTGTTTCATTTAAAAATGGAAAATTTCCACCATTTGAAATTTAATATATCTTTTACTTTTGTGGTTACTTTATTTAGTATTGAATAAATCATAAATGCAAGTATACATTAATGTATTATAGTGCAATATATGTAGAAAAAATCGGAAATCTCTTGATGCTCTGAATGCTTTCCATTCTTCATATATTTTCAGTATTTGCTGATGATGTATATCAGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGAGTGGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATCGATTTATTTGACAATTCATCGTGTGATCCTTCGTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGAACATGATTCGTCTGGAATGCTGGCAATTAATTTACCGCCAAATTCATGCCACTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTCTGGAGCGTGGAAAAAATGAGTCTACAAATTCTTCCAATCAGTCTTCAATAAACAGGGAGAAGGAATTTACGAATGATGATGAGTACATTAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGTAGTTTCTTTAATACTTTGATCTTGCTCATTACAAGTCCTTGCTACTTTTGTTCCCTACCACATGACACCTTTTTTCTCCTGGCCCCAGGTGTTTGATTTGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTGATCTCTCTTGTGCCATCTGGTCAAAGTTGCCAAACAGTTGAAGGTGCAAATACCGGGATTCTGGATAATGCAAATTTACCTTTTGATTCGCTTGATGGGATTGAATTACCAGATAGAAGTGATCCCTTTGAAAAGAAATTGCGGAATCCTAATCACATAACCTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTGTTTGTAAGATCAAATGATAGACCATCAGCGTTAAGCAGGCAATCAGGTCAAGCTGCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTATCTCTGGCGCACAGAATGTTTGCAAACAATGTTCTCATGGAGCTTGAAAATGTGGTAAGGTCCTAATTTCTTAATAACTCGATTTCCGATGAAAACACACTGCTTCATAAAATTTAAGGGGAAAAGACTACAATAGTTATGATTTCTATATTTGACGTTACCAGCATATTAATCTTCTAGTTTATCTTTTGTTCATTCTCAGGTTTGGAAAGTCCCATTTCTTCAGTTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCATGGACATTTTTTATGGAAGTTCCTCGATCCATACTTCATCCTAATAGCATCCAGGCTCATACATCAGACAATCATCAGATGAATAATATAACCAAATCACAATTTCTGACTAAAGTAGTTGTGAATGATGATTGCATTACTATCGAAGGGGAAGGTGCACCTAATGTCGTTGGCTTGTTCAATGGAAATTCCAAGGATATCCATTCGATGAATAGATATGGTTGTGACTTGGCTGATCTTCCCGTTATAATTCTGTTGCAGGTGAGTCAAGTGGATTTCCTTGCTTCTGAGCTTCGATGTCAACAGTAATAGTATCATTGTGTTTCTGTAACAGGTTGCGAGCCAAATTATTCTTTGGCTTCATGAGGAAGCTCTAACTTGGGGAATAAAGGCCAACCGTGACTTCCTAAGTCTGTCATTTGAACTAGAACAAGGTGAAATACTCCGTCTGGTAGCCCATGTAGACCCAGATGATCCTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGTCTGATGGAGGACAAGAAACTTCATTTTGACAGTTCAGATGTTATACCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTAGAAGTTTTGCATTCAACACTAATGGATTTAGTTAGTTTGTGCAGTGGAGTTGGTAGTAGCCTATAACCATGCTTTTCTTGTCTGATATTACAAATAGAAATTGCATTAAGTTCCTGTAATTTCTGCCTCTTGTTTTTCTAATCTAATGATATCTTCAGTTTTTGTCTGCATTGCTTACTCAACATCATGTATTATTTATAAACTATGCAAAAATAGTGAATGTAGG mRNA sequence GAAAAAGTTAAATTTTCCGAAGGGAAAAAAAAAGGTAAAGAAACCTAAGAGCATCATTTCTGCTTCCTCTTCTCCCCTTCTCTCCCGTCAACCCTCCCGTGCAGTTCTTCTCCAGCAGGGGCCAACGAGTCTCCGACGGCGACGGTGTAGACAACGACGTGGGCATCCTTTTCTTTGGCAGCCTCTGACCATGCGCGAATGTGAGCTTTGGTGAATCGTCCTTGCACAACCTCACCAACGAGCAGCCCCAACGACCTGTCCTTGCGTATCACACCCACGCATTCACGTGCGATTGTCGACGATACCAGGTTCCTCTCCTTTTTGACGAGTTTCGGCATTGACCCACACTTCGATTGCCCTCAAATCAGTTTACCCACAATTTATAAGGCTCAGATTTGCAAGTTTGGATGCTTTCGAACACCAACCAGCATGGCTTGGAGCTTTTTCAATAAGATTCCATCTCAATTTCTCTCTCAGCACAGTCAGGACTCTCAACTATTCTTTACTGTGAGGGCTTGCTCCAAACCTTTTCCCCTTTGGCATTATTTCGGGAAAATACAGTGTGAATATGGACGAAGACATGAAAGTTTCTCTTGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAGGAGACCGGTCTCGAACGATTTCCATTAGATGTTGGTTATGAAGAGAAACGGTTGTCACTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCGTGGCAATGGCAGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACCGTGGAAGCTAACGATGCAGTAACAGTGGCTGGGATGACAAGGCCAAAACCATTACCTAATGAAGTTTTATCAGATCTTGGAGTGTCTGTAGCAACGAAACTACAATGCTTTCGGCATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGACAGATTGCAAGGGAAGCGAGATTTTATGGTGCTTTAATTCGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGAGTGGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATCGATTTATTTGACAATTCATCGTGTGATCCTTCGTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGAACATGATTCGTCTGGAATGCTGGCAATTAATTTACCGCCAAATTCATGCCACTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTCTGGAGCGTGGAAAAAATGAGTCTACAAATTCTTCCAATCAGTCTTCAATAAACAGGGAGAAGGAATTTACGAATGATGATGAGTACATTAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGTGTTTGATTTGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTGATCTCTCTTGTGCCATCTGGTCAAAGTTGCCAAACAGTTGAAGGTGCAAATACCGGGATTCTGGATAATGCAAATTTACCTTTTGATTCGCTTGATGGGATTGAATTACCAGATAGAAGTGATCCCTTTGAAAAGAAATTGCGGAATCCTAATCACATAACCTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTGTTTGTAAGATCAAATGATAGACCATCAGCGTTAAGCAGGCAATCAGGTCAAGCTGCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTATCTCTGGCGCACAGAATGTTTGCAAACAATGTTCTCATGGAGCTTGAAAATGTGGTTTGGAAAGTCCCATTTCTTCAGTTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCATGGACATTTTTTATGGAAGTTCCTCGATCCATACTTCATCCTAATAGCATCCAGGCTCATACATCAGACAATCATCAGATGAATAATATAACCAAATCACAATTTCTGACTAAAGTAGTTGTGAATGATGATTGCATTACTATCGAAGGGGAAGGTGCACCTAATGTCGTTGGCTTGTTCAATGGAAATTCCAAGGATATCCATTCGATGAATAGATATGGTTGTGACTTGGCTGATCTTCCCGTTATAATTCTGTTGCAGGTTGCGAGCCAAATTATTCTTTGGCTTCATGAGGAAGCTCTAACTTGGGGAATAAAGGCCAACCGTGACTTCCTAAGTCTGTCATTTGAACTAGAACAAGGTGAAATACTCCGTCTGGTAGCCCATGTAGACCCAGATGATCCTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGTCTGATGGAGGACAAGAAACTTCATTTTGACAGTTCAGATGTTATACCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTAGAAGTTTTGCATTCAACACTAATGGATTTAGTTAGTTTGTGCAGTGGAGTTGGTAGTAGCCTATAACCATGCTTTTCTTGTCTGATATTACAAATAGAAATTGCATTAAGTTCCTGTAATTTCTGCCTCTTGTTTTTCTAATCTAATGATATCTTCAGTTTTTGTCTGCATTGCTTACTCAACATCATGTATTATTTATAAACTATGCAAAAATAGTGAATGTAGG Coding sequence (CDS) ATGGACGAAGACATGAAAGTTTCTCTTGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAGGAGACCGGTCTCGAACGATTTCCATTAGATGTTGGTTATGAAGAGAAACGGTTGTCACTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCGTGGCAATGGCAGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACCGTGGAAGCTAACGATGCAGTAACAGTGGCTGGGATGACAAGGCCAAAACCATTACCTAATGAAGTTTTATCAGATCTTGGAGTGTCTGTAGCAACGAAACTACAATGCTTTCGGCATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGACAGATTGCAAGGGAAGCGAGATTTTATGGTGCTTTAATTCGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGAGTGGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATCGATTTATTTGACAATTCATCGTGTGATCCTTCGTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGAACATGATTCGTCTGGAATGCTGGCAATTAATTTACCGCCAAATTCATGCCACTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTCTGGAGCGTGGAAAAAATGAGTCTACAAATTCTTCCAATCAGTCTTCAATAAACAGGGAGAAGGAATTTACGAATGATGATGAGTACATTAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGTGTTTGATTTGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTGATCTCTCTTGTGCCATCTGGTCAAAGTTGCCAAACAGTTGAAGGTGCAAATACCGGGATTCTGGATAATGCAAATTTACCTTTTGATTCGCTTGATGGGATTGAATTACCAGATAGAAGTGATCCCTTTGAAAAGAAATTGCGGAATCCTAATCACATAACCTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTGTTTGTAAGATCAAATGATAGACCATCAGCGTTAAGCAGGCAATCAGGTCAAGCTGCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTATCTCTGGCGCACAGAATGTTTGCAAACAATGTTCTCATGGAGCTTGAAAATGTGGTTTGGAAAGTCCCATTTCTTCAGTTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCATGGACATTTTTTATGGAAGTTCCTCGATCCATACTTCATCCTAATAGCATCCAGGCTCATACATCAGACAATCATCAGATGAATAATATAACCAAATCACAATTTCTGACTAAAGTAGTTGTGAATGATGATTGCATTACTATCGAAGGGGAAGGTGCACCTAATGTCGTTGGCTTGTTCAATGGAAATTCCAAGGATATCCATTCGATGAATAGATATGGTTGTGACTTGGCTGATCTTCCCGTTATAATTCTGTTGCAGGTTGCGAGCCAAATTATTCTTTGGCTTCATGAGGAAGCTCTAACTTGGGGAATAAAGGCCAACCGTGACTTCCTAAGTCTGTCATTTGAACTAGAACAAGGTGAAATACTCCGTCTGGTAGCCCATGTAGACCCAGATGATCCTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGTCTGATGGAGGACAAGAAACTTCATTTTGACAGTTCAGATGTTATACCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTAGAAGTTTTGCATTCAACACTAATGGATTTAGTTAGTTTGTGCAGTGGAGTTGGTAGTAGCCTATAA Protein sequence MDEDMKVSLDKLPVKRLEAIEETGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQIAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVEHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERGKNESTNSSNQSSINREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVLISLVPSGQSCQTVEGANTGILDNANLPFDSLDGIELPDRSDPFEKKLRNPNHITFEIYLQQIFHELVFVRSNDRPSALSRQSGQAANDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQAHTSDNHQMNNITKSQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGEILRLVAHVDPDDPQGCLSWWLVMDDGLMEDKKLHFDSSDVIPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGSSL
Homology
BLAST of Bhi06G000030 vs. TAIR 10
Match: AT5G20170.1 (RNA polymerase II transcription mediators ) HSP 1 Score: 726.1 bits (1873), Expect = 2.6e-209 Identity = 380/659 (57.66%), Postives = 497/659 (75.42%), Query Frame = 0
Query: 1 MDEDMKVSLDKLPVKRLEAIEETGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDD--KK 60
MD DM++SLD+LP+KRLE+IEE G ERFP DV Y++KR+SLIRRIDFAWA+E++D+ KK
Sbjct: 1 MDSDMEISLDRLPIKRLESIEENGAERFPSDVDYDDKRVSLIRRIDFAWALEEEDELKKK 60
Query: 61 KQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEV 120
KQKKSSK+S W+W+ M+ENLQLAHQEL+VIIDLI+TV+ANDAVTVAGMTRPKP+PNE+
Sbjct: 61 KQKKSSKDSVEQWKWKGMVENLQLAHQELTVIIDLIDTVQANDAVTVAGMTRPKPMPNEI 120
Query: 121 LSDLGVSVATKLQCFRHLGKYFKQSAKGLERQIAREARFYGALIRLQQNWKVKRQRVAAP 180
LSDL VS ATKLQ +R+LG YFKQSAK LE++I REARFYGALIRLQ+NWKVKRQR+ A
Sbjct: 121 LSDLAVSTATKLQGYRNLGNYFKQSAKALEQKINREARFYGALIRLQRNWKVKRQRMLAS 180
Query: 181 APANEGFTIDLFDNSSCDPSSVFRPSS-STIRVEHDSSGMLAINLPPNSCHSLRFGFLSG 240
+NEGFTIDL D+S DP+S FRPS+ STIRV+HDS+GMLAIN+P +S +SLRFG++
Sbjct: 181 NASNEGFTIDLSDSSLYDPTSGFRPSTLSTIRVDHDSAGMLAINVPQDSWYSLRFGYVGL 240
Query: 241 CNVENPLERGKNESTNSSNQSSINREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN 300
+ N E ++ + + + EK +DD+Y+KET+SLLR+VH +IF+EQ+FD++N
Sbjct: 241 NPIGNSNESDEHIDSTTGHDIPGTSEKLSASDDKYVKETHSLLREVHKSIFAEQLFDMLN 300
Query: 301 REAFNPSLGINVTGIRENYLQLSIDQGTSVLISLVPSGQSCQTVEGANTGILDNANLPFD 360
REAFN +G N++G+REN++++SI QG S+ +SL PSG++ + ++A L +
Sbjct: 301 REAFNEGVGFNISGLRENFMEMSIGQGASLFVSLHPSGKNPSIKKS------ESATLLIE 360
Query: 361 SLDGIELPDRSDPFEKKLRNPNHITFEIYLQQIFHELVFVRSNDRPSALS-RQSGQAAND 420
S +E + D KKL PN ++EIYLQQIFHE F ++ D+ + S R S Q D
Sbjct: 361 SSGRVEPAEGGDYRLKKLGFPNRTSYEIYLQQIFHEHAFGKAKDQLKSKSIRASNQTEKD 420
Query: 421 -GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRS 480
SGLL HFCLSL HR+F+N VL+ LE+VV KVP+L LISHPTWNSR SSWT FM VP S
Sbjct: 421 SNSGLLDHFCLSLTHRIFSNRVLVHLESVVCKVPYLHLISHPTWNSRTSSWTVFMTVPPS 480
Query: 481 ILHPNSIQAHTSDNHQMNNITKSQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSM 540
I+ + + D + K+QF TKVVV DDCI++E E PNVVGL +S ++ S+
Sbjct: 481 IIPQGRSETQSPDGKRN---LKTQFRTKVVVKDDCISVEAECTPNVVGLLKSSSCNLFSI 540
Query: 541 NRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGEILRLVAHV 600
N+Y CD+ADLPV+IL QVASQI+ WL EEA T G KA+R+FLSLS E+ +GE + LVAHV
Sbjct: 541 NKYECDVADLPVMILQQVASQIVCWLLEEARTVGTKASREFLSLSLEIVEGERVSLVAHV 600
Query: 601 DPDDPQGCLSWWLVMDDGLMEDKKLHFDSSDVIPEYRKFLGHLSLEVLHSTLMDLVSLC 655
+P+D +GC+SWWLVM++G E++ + + E RK LGHLSL+VL+S LMDL++LC
Sbjct: 601 NPEDAKGCISWWLVMENGCTEER-------EGVSESRKLLGHLSLDVLYSVLMDLINLC 643
BLAST of Bhi06G000030 vs. ExPASy Swiss-Prot
Match: F4K460 (Mediator of RNA polymerase II transcription subunit 17 OS=Arabidopsis thaliana OX=3702 GN=MED17 PE=1 SV=1) HSP 1 Score: 726.1 bits (1873), Expect = 3.6e-208 Identity = 380/659 (57.66%), Postives = 497/659 (75.42%), Query Frame = 0
Query: 1 MDEDMKVSLDKLPVKRLEAIEETGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDD--KK 60
MD DM++SLD+LP+KRLE+IEE G ERFP DV Y++KR+SLIRRIDFAWA+E++D+ KK
Sbjct: 1 MDSDMEISLDRLPIKRLESIEENGAERFPSDVDYDDKRVSLIRRIDFAWALEEEDELKKK 60
Query: 61 KQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEV 120
KQKKSSK+S W+W+ M+ENLQLAHQEL+VIIDLI+TV+ANDAVTVAGMTRPKP+PNE+
Sbjct: 61 KQKKSSKDSVEQWKWKGMVENLQLAHQELTVIIDLIDTVQANDAVTVAGMTRPKPMPNEI 120
Query: 121 LSDLGVSVATKLQCFRHLGKYFKQSAKGLERQIAREARFYGALIRLQQNWKVKRQRVAAP 180
LSDL VS ATKLQ +R+LG YFKQSAK LE++I REARFYGALIRLQ+NWKVKRQR+ A
Sbjct: 121 LSDLAVSTATKLQGYRNLGNYFKQSAKALEQKINREARFYGALIRLQRNWKVKRQRMLAS 180
Query: 181 APANEGFTIDLFDNSSCDPSSVFRPSS-STIRVEHDSSGMLAINLPPNSCHSLRFGFLSG 240
+NEGFTIDL D+S DP+S FRPS+ STIRV+HDS+GMLAIN+P +S +SLRFG++
Sbjct: 181 NASNEGFTIDLSDSSLYDPTSGFRPSTLSTIRVDHDSAGMLAINVPQDSWYSLRFGYVGL 240
Query: 241 CNVENPLERGKNESTNSSNQSSINREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN 300
+ N E ++ + + + EK +DD+Y+KET+SLLR+VH +IF+EQ+FD++N
Sbjct: 241 NPIGNSNESDEHIDSTTGHDIPGTSEKLSASDDKYVKETHSLLREVHKSIFAEQLFDMLN 300
Query: 301 REAFNPSLGINVTGIRENYLQLSIDQGTSVLISLVPSGQSCQTVEGANTGILDNANLPFD 360
REAFN +G N++G+REN++++SI QG S+ +SL PSG++ + ++A L +
Sbjct: 301 REAFNEGVGFNISGLRENFMEMSIGQGASLFVSLHPSGKNPSIKKS------ESATLLIE 360
Query: 361 SLDGIELPDRSDPFEKKLRNPNHITFEIYLQQIFHELVFVRSNDRPSALS-RQSGQAAND 420
S +E + D KKL PN ++EIYLQQIFHE F ++ D+ + S R S Q D
Sbjct: 361 SSGRVEPAEGGDYRLKKLGFPNRTSYEIYLQQIFHEHAFGKAKDQLKSKSIRASNQTEKD 420
Query: 421 -GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRS 480
SGLL HFCLSL HR+F+N VL+ LE+VV KVP+L LISHPTWNSR SSWT FM VP S
Sbjct: 421 SNSGLLDHFCLSLTHRIFSNRVLVHLESVVCKVPYLHLISHPTWNSRTSSWTVFMTVPPS 480
Query: 481 ILHPNSIQAHTSDNHQMNNITKSQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSM 540
I+ + + D + K+QF TKVVV DDCI++E E PNVVGL +S ++ S+
Sbjct: 481 IIPQGRSETQSPDGKRN---LKTQFRTKVVVKDDCISVEAECTPNVVGLLKSSSCNLFSI 540
Query: 541 NRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGEILRLVAHV 600
N+Y CD+ADLPV+IL QVASQI+ WL EEA T G KA+R+FLSLS E+ +GE + LVAHV
Sbjct: 541 NKYECDVADLPVMILQQVASQIVCWLLEEARTVGTKASREFLSLSLEIVEGERVSLVAHV 600
Query: 601 DPDDPQGCLSWWLVMDDGLMEDKKLHFDSSDVIPEYRKFLGHLSLEVLHSTLMDLVSLC 655
+P+D +GC+SWWLVM++G E++ + + E RK LGHLSL+VL+S LMDL++LC
Sbjct: 601 NPEDAKGCISWWLVMENGCTEER-------EGVSESRKLLGHLSLDVLYSVLMDLINLC 643
BLAST of Bhi06G000030 vs. ExPASy TrEMBL
Match: A0A0A0KXX2 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis sativus OX=3659 GN=MED17 PE=3 SV=1) HSP 1 Score: 1245.3 bits (3221), Expect = 0.0e+00 Identity = 620/662 (93.66%), Postives = 644/662 (97.28%), Query Frame = 0
Query: 1 MDEDMKVSLDKLPVKRLEAIEETGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
MDEDMKVSLDKLPVKRLEAIEE GLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ
Sbjct: 1 MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
Query: 61 KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
KKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVL+
Sbjct: 61 KKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120
Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQIAREARFYGALIRLQQNWKVKRQRVAAPAP 180
DLGVSVATKLQCFRHLGKYFKQSAKGLERQ+AREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVEHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
ANEGFTIDLFDNSSCDPSSVFRPSSSTIRV+HDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
Query: 241 ENPLERGKNESTNSSNQSSINREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA 300
ENPLER KNESTN SNQSS+NREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN+EA
Sbjct: 241 ENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA 300
Query: 301 FNPSLGINVTGIRENYLQLSIDQGTSVLISLVPSGQSCQTVEGANTGILDNANLPFDSLD 360
FNPS+GINVTGIRENYLQLSIDQGTSV ISLVPSGQS QTVEGAN+ IL+NA+LPFDSLD
Sbjct: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLD 360
Query: 361 GIELPDRSDPFEKKLRNPNHITFEIYLQQIFHELVFVRSNDRP-SALSRQSGQAANDGSG 420
GIELPDRSDP EKKLRNPNHITFEIYLQQIFHELVFV+SNDRP S+LSRQSGQ +NDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420
Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP 480
LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILHP
Sbjct: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHP 480
Query: 481 NSIQAHTSDNHQMNNITKSQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYG 540
NSI+A TSD +QMNN+TK+QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+S NRY
Sbjct: 481 NSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYS 540
Query: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGEILRLVAHVDPDD 600
CDLADLPVIILLQVASQIILWLHEEAL WGIKANRDFLSLSFELEQGE LRLVAHVDP+D
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600
Query: 601 PQGCLSWWLVMDDGLMEDKKLHFDSSDVIPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGS 660
PQGCLSWWLVMDDGLMED+KL+F++SDV+PEYRKFLGHLSLEVLHSTLMDLVSLCSGVG
Sbjct: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660
Query: 661 SL 662
SL
Sbjct: 661 SL 662
BLAST of Bhi06G000030 vs. ExPASy TrEMBL
Match: A0A1S4E2I2 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo OX=3656 GN=LOC103498687 PE=3 SV=1) HSP 1 Score: 1244.2 bits (3218), Expect = 0.0e+00 Identity = 616/662 (93.05%), Postives = 643/662 (97.13%), Query Frame = 0
Query: 1 MDEDMKVSLDKLPVKRLEAIEETGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
MDED+KVSLDKLP+KRLEAIEE GLERFP DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQ
Sbjct: 1 MDEDLKVSLDKLPIKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQ 60
Query: 61 KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVL+
Sbjct: 61 KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120
Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQIAREARFYGALIRLQQNWKVKRQRVAAPAP 180
DLGVSVATKLQCFRHLGKYFKQSAKGLERQ+AREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVEHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
ANEGFTIDLFDNSSCDPSSVFRPSSSTIRV+HDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
Query: 241 ENPLERGKNESTNSSNQSSINREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA 300
ENPLE KN++TN SNQ+S+ REKEFTNDDEYIKETNSLLRQVHHAIF EQVFDLVN EA
Sbjct: 241 ENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA 300
Query: 301 FNPSLGINVTGIRENYLQLSIDQGTSVLISLVPSGQSCQTVEGANTGILDNANLPFDSLD 360
FNPS+GINVTGIRENYLQLSIDQGTSV ISLVPSGQSCQTVEGAN+ ILDNANLPFDSLD
Sbjct: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLD 360
Query: 361 GIELPDRSDPFEKKLRNPNHITFEIYLQQIFHELVFVRSNDRP-SALSRQSGQAANDGSG 420
GIELPDRSDP EKKLRNPNHITFEIYLQQIFHELVFV+SNDRP S+LSRQSGQ +NDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420
Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP 480
LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP
Sbjct: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP 480
Query: 481 NSIQAHTSDNHQMNNITKSQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYG 540
NSIQA TSD++QMNN+TK+QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+ NRY
Sbjct: 481 NSIQARTSDSYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYLTNRYS 540
Query: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGEILRLVAHVDPDD 600
CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGE LRLVAHVDP+D
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600
Query: 601 PQGCLSWWLVMDDGLMEDKKLHFDSSDVIPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGS 660
PQGCLSWWLVMDDGLMED+KL+F++SDV+PEYRKFLG+LSLEVLHSTLMDLVSLCSGVG
Sbjct: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGG 660
Query: 661 SL 662
SL
Sbjct: 661 SL 662
BLAST of Bhi06G000030 vs. ExPASy TrEMBL
Match: A0A5D3BMZ9 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo var. makuwa OX=1194695 GN=MED17 PE=3 SV=1) HSP 1 Score: 1244.2 bits (3218), Expect = 0.0e+00 Identity = 616/662 (93.05%), Postives = 643/662 (97.13%), Query Frame = 0
Query: 1 MDEDMKVSLDKLPVKRLEAIEETGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
MDED+KVSLDKLP+KRLEAIEE GLERFP DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQ
Sbjct: 1 MDEDLKVSLDKLPIKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQ 60
Query: 61 KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVL+
Sbjct: 61 KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120
Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQIAREARFYGALIRLQQNWKVKRQRVAAPAP 180
DLGVSVATKLQCFRHLGKYFKQSAKGLERQ+AREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVEHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
ANEGFTIDLFDNSSCDPSSVFRPSSSTIRV+HDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
Query: 241 ENPLERGKNESTNSSNQSSINREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA 300
ENPLE KN++TN SNQ+S+ REKEFTNDDEYIKETNSLLRQVHHAIF EQVFDLVN EA
Sbjct: 241 ENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA 300
Query: 301 FNPSLGINVTGIRENYLQLSIDQGTSVLISLVPSGQSCQTVEGANTGILDNANLPFDSLD 360
FNPS+GINVTGIRENYLQLSIDQGTSV ISLVPSGQSCQTVEGAN+ ILDNANLPFDSLD
Sbjct: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLD 360
Query: 361 GIELPDRSDPFEKKLRNPNHITFEIYLQQIFHELVFVRSNDRP-SALSRQSGQAANDGSG 420
GIELPDRSDP EKKLRNPNHITFEIYLQQIFHELVFV+SNDRP S+LSRQSGQ +NDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420
Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP 480
LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP
Sbjct: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP 480
Query: 481 NSIQAHTSDNHQMNNITKSQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYG 540
NSIQA TSD++QMNN+TK+QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+ NRY
Sbjct: 481 NSIQARTSDSYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYLTNRYS 540
Query: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGEILRLVAHVDPDD 600
CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGE LRLVAHVDP+D
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600
Query: 601 PQGCLSWWLVMDDGLMEDKKLHFDSSDVIPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGS 660
PQGCLSWWLVMDDGLMED+KL+F++SDV+PEYRKFLG+LSLEVLHSTLMDLVSLCSGVG
Sbjct: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGG 660
Query: 661 SL 662
SL
Sbjct: 661 SL 662
BLAST of Bhi06G000030 vs. ExPASy TrEMBL
Match: A0A5A7TDC1 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G00600 PE=3 SV=1) HSP 1 Score: 1239.6 bits (3206), Expect = 0.0e+00 Identity = 616/663 (92.91%), Postives = 643/663 (96.98%), Query Frame = 0
Query: 1 MDEDMKVSLDKLPVKRLEAIEETGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
MDED+KVSLDKLP+KRLEAIEE GLERFP DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQ
Sbjct: 1 MDEDLKVSLDKLPIKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQ 60
Query: 61 KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVL+
Sbjct: 61 KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120
Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQIAREARFYGALIRLQQNWKVKRQRVAAPAP 180
DLGVSVATKLQCFRHLGKYFKQSAKGLERQ+AREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVEHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
ANEGFTIDLFDNSSCDPSSVFRPSSSTIRV+HDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
Query: 241 ENPLERGKNESTNSSNQSSINREKEFTNDDEYIKETNSLLRQVHHAIFSEQ-VFDLVNRE 300
ENPLE KN++TN SNQ+S+ REKEFTNDDEYIKETNSLLRQVHHAIF EQ VFDLVN E
Sbjct: 241 ENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVVFDLVNHE 300
Query: 301 AFNPSLGINVTGIRENYLQLSIDQGTSVLISLVPSGQSCQTVEGANTGILDNANLPFDSL 360
AFNPS+GINVTGIRENYLQLSIDQGTSV ISLVPSGQSCQTVEGAN+ ILDNANLPFDSL
Sbjct: 301 AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSL 360
Query: 361 DGIELPDRSDPFEKKLRNPNHITFEIYLQQIFHELVFVRSNDRP-SALSRQSGQAANDGS 420
DGIELPDRSDP EKKLRNPNHITFEIYLQQIFHELVFV+SNDRP S+LSRQSGQ +NDGS
Sbjct: 361 DGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGS 420
Query: 421 GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILH 480
GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILH
Sbjct: 421 GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILH 480
Query: 481 PNSIQAHTSDNHQMNNITKSQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRY 540
PNSIQA TSD++QMNN+TK+QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+ NRY
Sbjct: 481 PNSIQARTSDSYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYLTNRY 540
Query: 541 GCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGEILRLVAHVDPD 600
CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGE LRLVAHVDP+
Sbjct: 541 SCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE 600
Query: 601 DPQGCLSWWLVMDDGLMEDKKLHFDSSDVIPEYRKFLGHLSLEVLHSTLMDLVSLCSGVG 660
DPQGCLSWWLVMDDGLMED+KL+F++SDV+PEYRKFLG+LSLEVLHSTLMDLVSLCSGVG
Sbjct: 601 DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVG 660
Query: 661 SSL 662
SL
Sbjct: 661 GSL 663
BLAST of Bhi06G000030 vs. ExPASy TrEMBL
Match: A0A6J1JAW7 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucurbita maxima OX=3661 GN=LOC111485135 PE=3 SV=1) HSP 1 Score: 1206.4 bits (3120), Expect = 0.0e+00 Identity = 602/662 (90.94%), Postives = 631/662 (95.32%), Query Frame = 0
Query: 1 MDEDMKVSLDKLPVKRLEAIEETGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
MD DMKVSLDKLPVKRLEAIEE GLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ
Sbjct: 1 MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
Query: 61 KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
KK+SKES+TPWQWQ+MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS
Sbjct: 61 KKTSKESATPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQIAREARFYGALIRLQQNWKVKRQRVAAPAP 180
DLGVSVATKLQCFRHLGKYFKQSAKGLERQ+AREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVEHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
ANEGFTIDLFDN SCDPSSVFRPSSSTIRV+ DSSGMLAI+LPPN+CHSL FGFLSGCN+
Sbjct: 181 ANEGFTIDLFDNLSCDPSSVFRPSSSTIRVDRDSSGMLAISLPPNTCHSLCFGFLSGCNM 240
Query: 241 ENPLERGKNESTNSSNQSSINREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA 300
ENPLERGKNESTNSSNQS I EKEFTNDDEYIKETNSLLRQVHHAIFSEQVFD VNREA
Sbjct: 241 ENPLERGKNESTNSSNQSPIESEKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDFVNREA 300
Query: 301 FNPSLGINVTGIRENYLQLSIDQGTSVLISLVPSGQSCQTVEGANTGILDNANLPFDSLD 360
FNPSLGINVTGIRENYLQLSIDQGTSV ISLVP+GQSCQTVE ANTGILDN NLPFDSLD
Sbjct: 301 FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSCQTVEDANTGILDNTNLPFDSLD 360
Query: 361 GIELPDRSDPFEKKLRNPNHITFEIYLQQIFHELVFVRSNDRP-SALSRQSGQAANDGSG 420
GIELPDRSDP EKKLRNPN+ TFEIYLQQIFHELVFV+SND+P S+LSRQSGQ +NDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSNDKPISSLSRQSGQPSNDGSG 420
Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP 480
LLGHFCLSLAHR+FAN VLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP+S LHP
Sbjct: 421 LLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHP 480
Query: 481 NSIQAHTSDNHQMNNITKSQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYG 540
SIQA TSD+H+MN++TKSQF TKVVVNDDCITIEGEGAP+VVGLF GNSKD++SMNRYG
Sbjct: 481 PSIQARTSDSHKMNSVTKSQFQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYG 540
Query: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGEILRLVAHVDPDD 600
CDLADLPVIILLQVASQIILWLHEEALTWGIK +RDFLSLSFELEQGE LRLVAHVDP+D
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED 600
Query: 601 PQGCLSWWLVMDDGLMEDKKLHFDSSDVIPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGS 660
QGCLSWWLVMDDGLMED+K +F+ SDV+PEYRKFLGHLSLEVL STLMDLVSLCSG G
Sbjct: 601 AQGCLSWWLVMDDGLMEDRKHNFNISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGG 660
Query: 661 SL 662
SL
Sbjct: 661 SL 662
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| AT5G20170.1 | 2.6e-209 | 57.66 | RNA polymerase II transcription mediators | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| F4K460 | 3.6e-208 | 57.66 | Mediator of RNA polymerase II transcription subunit 17 OS=Arabidopsis thaliana O... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KXX2 | 0.0e+00 | 93.66 | Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis sativus OX=365... | [more] |
| A0A1S4E2I2 | 0.0e+00 | 93.05 | Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo OX=3656 G... | [more] |
| A0A5D3BMZ9 | 0.0e+00 | 93.05 | Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo var. maku... | [more] |
| A0A5A7TDC1 | 0.0e+00 | 92.91 | Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo var. maku... | [more] |
| A0A6J1JAW7 | 0.0e+00 | 90.94 | Mediator of RNA polymerase II transcription subunit 17 OS=Cucurbita maxima OX=36... | [more] |
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR019313 | Mediator complex, subunit Med17 | PFAM | PF10156 | Med17 | coord: 56..334
e-value: 6.8E-5
score: 21.8 |
| IPR019313 | Mediator complex, subunit Med17 | PANTHER | PTHR13114 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 17 | coord: 1..652 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 245..262 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 245..264 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006357 |
regulation of transcription by RNA polymerase II |
| cellular_component |
GO:0070847 |
core mediator complex |
| cellular_component |
GO:0016592 |
mediator complex |
| molecular_function |
GO:0003712 |
transcription coregulator activity |
|
