Sequences
The following sequences are available for this feature:
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCTCTTGCTGGAGCAGGATCACACACTGATTTTACTTCAGTTCTCAACACAGTCGTCAAGCAGTTATCAGACCATGACGAAACTCAAGAAGATGCAAATTCTTCTGCATCTGTAAATAATGAAGTCAAAGATGACGAAGATGATTATGACCCTTTCGCCGATTACGACATCAATGACCCGTTTTTAGACTAA
ATGAGTTCTCTTGCTGGAGCAGGATCACACACTGATTTTACTTCAGTTCTCAACACAGTCGTCAAGCAGTTATCAGACCATGACGAAACTCAAGAAGATGCAAATTCTTCTGCATCTGTAAATAATGAAGTCAAAGATGACGAAGATGATTATGACCCTTTCGCCGATTACGACATCAATGACCCGTTTTTAGACTAA
ATGAGTTCTCTTGCTGGAGCAGGATCACACACTGATTTTACTTCAGTTCTCAACACAGTCGTCAAGCAGTTATCAGACCATGACGAAACTCAAGAAGATGCAAATTCTTCTGCATCTGTAAATAATGAAGTCAAAGATGACGAAGATGATTATGACCCTTTCGCCGATTACGACATCAATGACCCGTTTTTAGACTAA
MSSLAGAGSHTDFTSVLNTVVKQLSDHDETQEDANSSASVNNEVKDDEDDYDPFADYDINDPFLD
Homology
BLAST of Bhi05G001423 vs. ExPASy TrEMBL
Match:
A0A5A7UWR6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00160 PE=4 SV=1)
HSP 1 Score: 71.2 bits (173), Expect = 1.7e-09
Identity = 39/66 (59.09%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of Bhi05G001423 vs. ExPASy TrEMBL
Match:
A0A5A7V6D1 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00540 PE=4 SV=1)
HSP 1 Score: 53.5 bits (127), Expect = 3.8e-04
Identity = 34/65 (52.31%), Postives = 43/65 (66.15%), Query Frame = 0
BLAST of Bhi05G001423 vs. ExPASy TrEMBL
Match:
A0A5A7UVN1 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00580 PE=4 SV=1)
HSP 1 Score: 53.1 bits (126), Expect = 4.9e-04
Identity = 34/65 (52.31%), Postives = 43/65 (66.15%), Query Frame = 0
BLAST of Bhi05G001423 vs. ExPASy TrEMBL
Match:
A0A5A7VIK9 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001410 PE=4 SV=1)
HSP 1 Score: 52.8 bits (125), Expect = 6.4e-04
Identity = 34/65 (52.31%), Postives = 43/65 (66.15%), Query Frame = 0
BLAST of Bhi05G001423 vs. ExPASy TrEMBL
Match:
A0A5A7SR64 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G001720 PE=4 SV=1)
HSP 1 Score: 52.8 bits (125), Expect = 6.4e-04
Identity = 37/66 (56.06%), Postives = 46/66 (69.70%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A5A7UWR6 1.7e-09 59.09 Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more] A0A5A7V6D1 3.8e-04 52.31 Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more] A0A5A7UVN1 4.9e-04 52.31 Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more] A0A5A7VIK9 6.4e-04 52.31 Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more] A0A5A7SR64 6.4e-04 56.06 Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G001720 PE... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
A T G A G T T C T C T T G C T G G A G C A G G A T C A C A C A C T G A T T T T A C T T C A G T T C T C A A C A C A G T C G T C A A G C A G T T A T C A G A C C A T G A C G A A A C T C A A G A A G A T G C A A A T T C T T C T G C A T C T G T A A A T A A T G A A G T C A A A G A T G A C G A A G A T G A T T A T G A C C C T T T C G C C G A T T A C G A C A T C A A T G A C C C G T T T T T A G A C T A A 20 40 60 80 100 120 140 160 180 Score = Sequence mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 24..65
Relationships
The following mRNA feature(s) are a part of this gene:
