Bhi05G001417 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G001417
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Eukaryotic translation initiation factor 3 subunit B
Location	chr5: 54008325 .. 54010244 (-)
RNA-Seq Expression	Bhi05G001417
Synteny	Bhi05G001417

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACGTGATGCTGATGAAGGAGATTGAGGAAACAGCTTGTCGGCTTGGGATAGATCTCTCCCAAGTTGATTTTGACGCTATTCGTCTCCCTCCTGGTGAGGATTTCAGAATCATTAGGTCAAAGCTTTACACTTTTATCGTTTGATTTTGTATCTTAATTTGCATTTTCTGAGCTCTCCTTTGAAACGTGATGGGTTTATTCGTTTATTTTCGTTTTTTCATTTCGTGGCTCATATTCCTTCATTTTTCTGCAATTATGTATATAGTGATGATGAAGAGGTTCTACAAGAGGAGAGTCTAGAGTTTGATTCTAGGTTTGGAAACATTATAGTTGTTGACAATCTTCCAGTTGTTCCTCCGGAGAAGTTTGAGAAACTCGAAGGTGTTGTTCGTAAAATTTTTGGATAGATTGGAGTAATTAAGGATGATGGTTTGTGGATGCCTGTTGACCCTACTACATAGAAAACTTTGGTTACTTCTTTATTGAGTATAGCACCCCACAGGTACTTTCTCATTATCTCACGTACTCTTGTGTTGTTTCTGCTAACTTTTCTCTGAAACTTCATATATTTATCAAATCAAAATGTATTTTAAATAGTATTATGAAGAAATAATGTTCTATAGTATAAATCTTGTTTAAGATAAAATGAAAGTCTCCTATCTTTGTCACTTTTGGTTCTTGTTGGCATTTGATGAAGTTCAATAGAGTGACAGAAACTTGCAAGCTCATCTTACTTTCTAGCATAGCTGGTACTTAACTCTAGTCCCTTTGGGTGGGACTACTTTCAACCTCCATAGTCCATCCATTGTAATGGTGCCTTACACCACTCTTTTACCATCACCCTATCTTCCATTTAGAGGTGAAATATAAATACTATAGAGGTAGTTTGATGTTCATGAATTAATGACTTGTTTGACTTAACTTGTTATGATTATTTCCTAATCTCTCATTGTCTTTGCATACCAGTAATATATTGGCACAACATTAGTGGTACATCGTAAATATTCCTTGTTAGAATGGTTTTGAAATGGAAACTTCTAGCATTCAGAAAGTGTGCACTATATGATAATGTGATATTTTGGATTACAACTAGACATGCGTTTCATTCAAGAGTATGTTTACCTTCATGGAGTTCTGTTCCTATACGTTTTGTTACTATATTTGTTTTTGCACTCGGCTGTGCTTCTAGGCTTTTTGTTGTACGTCCTTTTTTTTTTTTTGTGTGTGTGTGTAATCTAATCTGTCTTGTGTGTAATACTGTTTACTTTGATGCTAGAAGAAGAGTTTGACTTTCTACCTCTACGGGGGTACACATTATCTTGCCTATTCTTTCCTCTCACCTATAGTTCTGATCCATGAATTGAACATCTCATTTAATTTTAGTCATATTGAAGGAGGCTGAGCTTGCTAAAGAGAAGACTGATGGGTACAAGCTGGATAGAGCTCATATTTTCACAGTTAATATGTTTGAGGACTTCGACAGATTTATGAAAGTCCCAGATGAGTGGCCCCCTCCTGAAATTAGCCCATATACTCCTAGGGTAAACTATCTGCAACGTTACTTGATTTTGCTTCTCCACTGCTTCTTGTGATATGTTTTCTTGAGGAAAGGTGGGGGTTTTATGGATCATTTGAAGGTTATCTGGGAGCTGTGCTTAGCTGAATATTTTCCATGGGGAAAAAGAACCATGTGAGAATGTCATTTTATGGATCAAATTGTGTTGTTGTGGAAGTATGATGCTAATTGCTATTTACTTTTGAACATTTCAGGAGAATCTTCAACAGTGGCTAATTGATGAAAAAGCACGGGGTCAGTTTGTTATCCAATCTGGTTTCGATACTGAGGTTTTCTGGGATGATGCTAGACATTTGAAGCCTGAGCCTGTTTACAAGCATCAAGTGAGTATCCTTTAG

mRNA sequence

ATGGCGGACGTGATGCTGATGAAGGAGATTGAGGAAACAGCTTGTCGGCTTGGGATAGATCTCTCCCAAGTTGATTTTGACGCTATTCGTCTCCCTCCTGGTGAGGATTTCAGAATCATTAGTGATGATGAAGAGGTTCTACAAGAGGAGAGTCTAGAGTTTGATTCTAGGTTTGGAAACATTATAGTTGTTGACAATCTTCCAGTTGTTCCTCCGGAGAAGTTTGAGAAACTCGAAGGTGTTGAGGCTGAGCTTGCTAAAGAGAAGACTGATGGGTACAAGCTGGATAGAGCTCATATTTTCACAGTTAATATGTTTGAGGACTTCGACAGATTTATGAAAGTCCCAGATGAGTGGCCCCCTCCTGAAATTAGCCCATATACTCCTAGGGAGAATCTTCAACAGTGGCTAATTGATGAAAAAGCACGGGGTCAGTTTGTTATCCAATCTGGTTTCGATACTGAGGTTTTCTGGGATGATGCTAGACATTTGAAGCCTGAGCCTGTTTACAAGCATCAAGTGAGTATCCTTTAG

Coding sequence (CDS)

ATGGCGGACGTGATGCTGATGAAGGAGATTGAGGAAACAGCTTGTCGGCTTGGGATAGATCTCTCCCAAGTTGATTTTGACGCTATTCGTCTCCCTCCTGGTGAGGATTTCAGAATCATTAGTGATGATGAAGAGGTTCTACAAGAGGAGAGTCTAGAGTTTGATTCTAGGTTTGGAAACATTATAGTTGTTGACAATCTTCCAGTTGTTCCTCCGGAGAAGTTTGAGAAACTCGAAGGTGTTGAGGCTGAGCTTGCTAAAGAGAAGACTGATGGGTACAAGCTGGATAGAGCTCATATTTTCACAGTTAATATGTTTGAGGACTTCGACAGATTTATGAAAGTCCCAGATGAGTGGCCCCCTCCTGAAATTAGCCCATATACTCCTAGGGAGAATCTTCAACAGTGGCTAATTGATGAAAAAGCACGGGGTCAGTTTGTTATCCAATCTGGTTTCGATACTGAGGTTTTCTGGGATGATGCTAGACATTTGAAGCCTGAGCCTGTTTACAAGCATCAAGTGAGTATCCTTTAG

Protein sequence

MADVMLMKEIEETACRLGIDLSQVDFDAIRLPPGEDFRIISDDEEVLQEESLEFDSRFGNIIVVDNLPVVPPEKFEKLEGVEAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWPPPEISPYTPRENLQQWLIDEKARGQFVIQSGFDTEVFWDDARHLKPEPVYKHQVSIL

Homology

[Close]

BLAST of Bhi05G001417 vs. TAIR 10
Match: AT5G27640.1 (translation initiation factor 3B1 )

HSP 1 Score: 216.5 bits (550), Expect = 1.8e-56
Identity = 112/206 (54.37%), Postives = 134/206 (65.05%), Query Frame = 0


Query: 5   MLMKEIEETACRLGIDLSQVDFDAIRLPPGEDFRIISDDEEVLQEESLEFDSRFGNIIVV 64
           M + +I+  A +LGID SQV+FD+I+LPPGEDF I SDDE V Q++  EFD+ FGNIIVV
Sbjct: 1   MEVVDIDARAAKLGIDWSQVNFDSIQLPPGEDFGIESDDEAVYQDDQSEFDTGFGNIIVV 60

Query: 65  DNLPVVPPEKFEKLEGV---------------------------------------EAEL 124
           D+LPVVP EKFEKLEGV                                       EA+ 
Sbjct: 61  DHLPVVPKEKFEKLEGVVKKIYNQLGVIKENGLWMPVDPDTKMTLGYCFIEFNTPQEAQN 120

Query: 125 AKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWPPPEISPYTPRENLQQWLIDEKARGQ 172
           AKEK+ GYKLD++HIF VNMF+DFDR M V +EW PP+  PY P ENLQ+WL DEKAR Q
Sbjct: 121 AKEKSHGYKLDKSHIFAVNMFDDFDRLMNVKEEWEPPQARPYVPGENLQKWLTDEKARDQ 180

[Close]

BLAST of Bhi05G001417 vs. TAIR 10
Match: AT5G27640.2 (translation initiation factor 3B1 )

HSP 1 Score: 206.5 bits (524), Expect = 1.8e-53
Identity = 112/232 (48.28%), Postives = 134/232 (57.76%), Query Frame = 0


Query: 5   MLMKEIEETACRLGIDLSQVDFDAIRLPPGEDFRIISDDEEVLQEESLEFDSRFGNIIVV 64
           M + +I+  A +LGID SQV+FD+I+LPPGEDF I SDDE V Q++  EFD+ FGNIIVV
Sbjct: 1   MEVVDIDARAAKLGIDWSQVNFDSIQLPPGEDFGIESDDEAVYQDDQSEFDTGFGNIIVV 60

Query: 65  DNLPVVPPEKFEKLEGV------------------------------------------- 124
           D+LPVVP EKFEKLEGV                                           
Sbjct: 61  DHLPVVPKEKFEKLEGVVKKIYNQLGVIKENGLWMPVDPDTKMTLGYCFIEFNTPQKGAQ 120

Query: 125 ----------------------EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEW 172
                                 EA+ AKEK+ GYKLD++HIF VNMF+DFDR M V +EW
Sbjct: 121 TRLFLMVEYFLRVSLNVWGSLQEAQNAKEKSHGYKLDKSHIFAVNMFDDFDRLMNVKEEW 180

[Close]

BLAST of Bhi05G001417 vs. TAIR 10
Match: AT5G25780.1 (eukaryotic translation initiation factor 3B-2 )

HSP 1 Score: 205.7 bits (522), Expect = 3.1e-53
Identity = 105/202 (51.98%), Postives = 129/202 (63.86%), Query Frame = 0


Query: 9   EIEETACRLGIDLSQVDFDAIRLPPGEDFRIISDDEEVLQEESLEFDSRFGNIIVVDNLP 68
           +I+    +LGI+ S V+ D+I+LPPG DF I SDDE V Q++  EFD+ FGNIIVVD+LP
Sbjct: 6   DIDVLTAQLGINWSDVNLDSIQLPPGNDFGIESDDESVYQDDQSEFDTGFGNIIVVDHLP 65

Query: 69  VVPPEKFEKLEGV---------------------------------------EAELAKEK 128
           VVP EKFEKLEGV                                       EA+ AKEK
Sbjct: 66  VVPKEKFEKLEGVVKKIYNQLGVIKENGLLMPVDPDTKMTLGYCFIEFNTPQEAQNAKEK 125

Query: 129 TDGYKLDRAHIFTVNMFEDFDRFMKVPDEWPPPEISPYTPRENLQQWLIDEKARGQFVIQ 172
           + GYKLD++HIF VNMF+DFDR M V +EW PP+  PY P ENLQ+WL D+KAR Q VI+
Sbjct: 126 SHGYKLDKSHIFAVNMFDDFDRLMNVKEEWEPPQERPYVPGENLQKWLTDDKARDQLVIR 185

[Close]

BLAST of Bhi05G001417 vs. ExPASy Swiss-Prot
Match: P56821 (Eukaryotic translation initiation factor 3 subunit B OS=Nicotiana tabacum OX=4097 GN=TIF3B1 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 5.5e-63
Identity = 123/210 (58.57%), Postives = 143/210 (68.10%), Query Frame = 0


Query: 1   MADVMLMKEIEETACRLGIDLSQVDFDAIRLPPGEDFRIISDDEEVLQEESLEFDSRFGN 60
           MADV  M EI   A R+G+DLSQ+D D+I LPPGED  I SDD+++++E+ LEFD+ FGN
Sbjct: 1   MADVTSMGEITAIAARIGVDLSQIDLDSIHLPPGEDCGIPSDDDDLMEEDPLEFDAGFGN 60

Query: 61  IIVVDNLPVVPPEKFEKLEGV--------------------------------------- 120
           I+VVDNLPVVP EKFEKLEGV                                       
Sbjct: 61  ILVVDNLPVVPKEKFEKLEGVVRKIYSQLGVIKEDGLWMPVDPETHKTLGYCFIEYNTPQ 120

Query: 121 EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWPPPEISPYTPRENLQQWLIDEK 172
           EAEL+KEKT GYKLDR+HIF VNMF+D +RF+KVPDEW PPEI PY P ENLQQWL DEK
Sbjct: 121 EAELSKEKTHGYKLDRSHIFAVNMFDDIERFLKVPDEWAPPEIKPYVPGENLQQWLTDEK 180

[Close]

BLAST of Bhi05G001417 vs. ExPASy Swiss-Prot
Match: Q9C5Z1 (Eukaryotic translation initiation factor 3 subunit B OS=Arabidopsis thaliana OX=3702 GN=TIF3B1 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.5e-55
Identity = 112/206 (54.37%), Postives = 134/206 (65.05%), Query Frame = 0


Query: 5   MLMKEIEETACRLGIDLSQVDFDAIRLPPGEDFRIISDDEEVLQEESLEFDSRFGNIIVV 64
           M + +I+  A +LGID SQV+FD+I+LPPGEDF I SDDE V Q++  EFD+ FGNIIVV
Sbjct: 1   MEVVDIDARAAKLGIDWSQVNFDSIQLPPGEDFGIESDDEAVYQDDQSEFDTGFGNIIVV 60

Query: 65  DNLPVVPPEKFEKLEGV---------------------------------------EAEL 124
           D+LPVVP EKFEKLEGV                                       EA+ 
Sbjct: 61  DHLPVVPKEKFEKLEGVVKKIYNQLGVIKENGLWMPVDPDTKMTLGYCFIEFNTPQEAQN 120

Query: 125 AKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWPPPEISPYTPRENLQQWLIDEKARGQ 172
           AKEK+ GYKLD++HIF VNMF+DFDR M V +EW PP+  PY P ENLQ+WL DEKAR Q
Sbjct: 121 AKEKSHGYKLDKSHIFAVNMFDDFDRLMNVKEEWEPPQARPYVPGENLQKWLTDEKARDQ 180

[Close]

BLAST of Bhi05G001417 vs. ExPASy Swiss-Prot
Match: Q569Z1 (Eukaryotic translation initiation factor 3 subunit B OS=Xenopus laevis OX=8355 GN=eif3b PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.7e-19
Identity = 59/170 (34.71%), Postives = 85/170 (50.00%), Query Frame = 0


Query: 40  ISDDE---EVLQEESLEFDSRFGNIIVVDNLPVVPPEKFEKLEGV--------------- 99
           ISD+E   ++L++   E D    ++IVVDN+P V P++ EKL+ V               
Sbjct: 39  ISDEELLGDILKDRPQEADG-IDSVIVVDNVPQVGPDRLEKLKNVIVKIFSKFGKLTNEF 98

Query: 100 --------------------EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWPP 159
                               +A+ A +  DGYKLD+ H F VN+F DFD++M + DEW  
Sbjct: 99  YPQAEGSTKGYIFLEYALPAQAQDAVKNADGYKLDKQHTFRVNLFTDFDKYMVIGDEWDV 158

Query: 160 PEISPYTPRENLQQWLIDEKARGQF--VIQSGFDTEVFWDDARHLKPEPV 170
           PE  P+    NL+ WL D   R QF  + +SG  T +FW D +  +P PV
Sbjct: 159 PEKQPFKDFGNLRSWLEDPDCRDQFSVIYESGDRTSIFWTDVK--EPVPV 205

[Close]

BLAST of Bhi05G001417 vs. ExPASy Swiss-Prot
Match: P55884 (Eukaryotic translation initiation factor 3 subunit B OS=Homo sapiens OX=9606 GN=EIF3B PE=1 SV=3)

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-17
Identity = 59/183 (32.24%), Postives = 87/183 (47.54%), Query Frame = 0


Query: 21  LSQVDFDAIRLPPGEDF-RIISDDE---EVLQEESLEFDSRFGNIIVVDNLPVVPPEKFE 80
           L   D D       EDF   +S++E   +VL++   E D    ++IVVDN+P V P++ E
Sbjct: 143 LENGDADEPSFSDPEDFVDDVSEEELLGDVLKDRPQEADG-IDSVIVVDNVPQVGPDRLE 202

Query: 81  KLEGV-----------------------------------EAELAKEKTDGYKLDRAHIF 140
           KL+ V                                    A  A +  DGYKLD+ H F
Sbjct: 203 KLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTF 262

Query: 141 TVNMFEDFDRFMKVPDEWPPPEISPYTPRENLQQWLIDEKARGQF--VIQSGFDTEVFWD 163
            VN+F DFD++M + DEW  PE  P+    NL+ WL + + R Q+  + +SG  T +FW+
Sbjct: 263 RVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEAECRDQYSVIFESGDRTSIFWN 322

[Close]

BLAST of Bhi05G001417 vs. ExPASy Swiss-Prot
Match: A7MB16 (Eukaryotic translation initiation factor 3 subunit B OS=Bos taurus OX=9913 GN=EIF3B PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.7e-17
Identity = 52/163 (31.90%), Postives = 82/163 (50.31%), Query Frame = 0


Query: 40  ISDDE---EVLQEESLEFDSRFGNIIVVDNLPVVPPEKFEKLEGVEAEL----------- 99
           +S++E   +VL++   E D    ++IVVDN+P V P++ EKL+ V  ++           
Sbjct: 135 VSEEELLADVLKDRPQEADG-IDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDF 194

Query: 100 ------------------------AKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWPP 159
                                   A +  DGYKLD+ H F VN+F DFD++M + DEW  
Sbjct: 195 YPEEDGRTKGYIFLEYASPAHALDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDI 254

Query: 160 PEISPYTPRENLQQWLIDEKARGQF--VIQSGFDTEVFWDDAR 163
           PE  P+    NL+ WL + + R Q+  + +SG  T +FW+D +
Sbjct: 255 PEKQPFKDLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVK 296

[Close]

BLAST of Bhi05G001417 vs. ExPASy TrEMBL
Match: A0A5A7UC22 (Eukaryotic translation initiation factor 3 subunit B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold33G00170 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.5e-79
Identity = 158/210 (75.24%), Postives = 163/210 (77.62%), Query Frame = 0


Query: 1   MADVMLMKEIEETACRLGIDLSQVDFDAIRLPPGEDFRIISDDEEVLQEESLEFDSRFGN 60
           MADV+LMKEIEETA RLGIDLSQVDFDAIRLPPGEDF IISDDEEVLQEESLEFDS FGN
Sbjct: 1   MADVVLMKEIEETAGRLGIDLSQVDFDAIRLPPGEDFGIISDDEEVLQEESLEFDSGFGN 60

Query: 61  IIVVDNLPVVPPEKFEKLEGV--------------------------------------- 120
           IIVVDNLPVVPPEKFEKLEGV                                       
Sbjct: 61  IIVVDNLPVVPPEKFEKLEGVVRKIFGQIGVIKDDGLWMPVDHTTQKTLGYCFIEYGTPQ 120

Query: 121 EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWPPPEISPYTPRENLQQWLIDEK 172
           EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEW PPE+SPYTP ENLQQWL DEK
Sbjct: 121 EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWAPPEVSPYTPGENLQQWLTDEK 180

[Close]

BLAST of Bhi05G001417 vs. ExPASy TrEMBL
Match: A0A5D3BXF2 (Eukaryotic translation initiation factor 3 subunit B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00310 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.5e-79
Identity = 158/210 (75.24%), Postives = 163/210 (77.62%), Query Frame = 0


Query: 1   MADVMLMKEIEETACRLGIDLSQVDFDAIRLPPGEDFRIISDDEEVLQEESLEFDSRFGN 60
           MADV+LMKEIEETA RLGIDLSQVDFDAIRLPPGEDF IISDDEEVLQEESLEFDS FGN
Sbjct: 1   MADVVLMKEIEETAGRLGIDLSQVDFDAIRLPPGEDFGIISDDEEVLQEESLEFDSGFGN 60

Query: 61  IIVVDNLPVVPPEKFEKLEGV--------------------------------------- 120
           IIVVDNLPVVPPEKFEKLEGV                                       
Sbjct: 61  IIVVDNLPVVPPEKFEKLEGVVRKIFGQIGVIKDDGLWMPVDHTTQKTLGYCFIEYGTPQ 120

Query: 121 EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWPPPEISPYTPRENLQQWLIDEK 172
           EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEW PPE+SPYTP ENLQQWL DEK
Sbjct: 121 EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWAPPEVSPYTPGENLQQWLTDEK 180

[Close]

BLAST of Bhi05G001417 vs. ExPASy TrEMBL
Match: A0A1S3CES0 (Eukaryotic translation initiation factor 3 subunit B OS=Cucumis melo OX=3656 GN=LOC103500082 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.5e-79
Identity = 158/210 (75.24%), Postives = 163/210 (77.62%), Query Frame = 0


Query: 1   MADVMLMKEIEETACRLGIDLSQVDFDAIRLPPGEDFRIISDDEEVLQEESLEFDSRFGN 60
           MADV+LMKEIEETA RLGIDLSQVDFDAIRLPPGEDF IISDDEEVLQEESLEFDS FGN
Sbjct: 1   MADVVLMKEIEETAGRLGIDLSQVDFDAIRLPPGEDFGIISDDEEVLQEESLEFDSGFGN 60

Query: 61  IIVVDNLPVVPPEKFEKLEGV--------------------------------------- 120
           IIVVDNLPVVPPEKFEKLEGV                                       
Sbjct: 61  IIVVDNLPVVPPEKFEKLEGVVRKIFGQIGVIKDDGLWMPVDHTTQKTLGYCFIEYGTPQ 120

Query: 121 EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWPPPEISPYTPRENLQQWLIDEK 172
           EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEW PPE+SPYTP ENLQQWL DEK
Sbjct: 121 EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWAPPEVSPYTPGENLQQWLTDEK 180

[Close]

BLAST of Bhi05G001417 vs. ExPASy TrEMBL
Match: A0A6J1F2H0 (Eukaryotic translation initiation factor 3 subunit B OS=Cucurbita moschata OX=3662 GN=LOC111439034 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.0e-79
Identity = 158/210 (75.24%), Postives = 163/210 (77.62%), Query Frame = 0


Query: 1   MADVMLMKEIEETACRLGIDLSQVDFDAIRLPPGEDFRIISDDEEVLQEESLEFDSRFGN 60
           MADVMLMK+IEETA RLGIDL+QVDFDAIRLPPGEDF IISDDEEVLQEESLEFDS FGN
Sbjct: 1   MADVMLMKDIEETADRLGIDLAQVDFDAIRLPPGEDFGIISDDEEVLQEESLEFDSGFGN 60

Query: 61  IIVVDNLPVVPPEKFEKLEGV--------------------------------------- 120
           IIVVDNLPVVPPEKFEKLEGV                                       
Sbjct: 61  IIVVDNLPVVPPEKFEKLEGVVRKIFGQIGVIKDDGLWMPVDPSTQKTLGYCFIEYGTPQ 120

Query: 121 EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWPPPEISPYTPRENLQQWLIDEK 172
           EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEW PPEI+PYTP ENLQQWL DEK
Sbjct: 121 EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWAPPEINPYTPGENLQQWLTDEK 180

[Close]

BLAST of Bhi05G001417 vs. ExPASy TrEMBL
Match: A0A0A0K4J9 (Eukaryotic translation initiation factor 3 subunit B OS=Cucumis sativus OX=3659 GN=Csa_7G281370 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.3e-79
Identity = 157/210 (74.76%), Postives = 163/210 (77.62%), Query Frame = 0


Query: 1   MADVMLMKEIEETACRLGIDLSQVDFDAIRLPPGEDFRIISDDEEVLQEESLEFDSRFGN 60
           MADV+LMKEIEETA RLGIDLSQVDFDAIRLPPGEDF IISDDEEVLQEESLEFDS FGN
Sbjct: 1   MADVVLMKEIEETAGRLGIDLSQVDFDAIRLPPGEDFGIISDDEEVLQEESLEFDSGFGN 60

Query: 61  IIVVDNLPVVPPEKFEKLEGV--------------------------------------- 120
           IIVVDNLPVVPPEKFEKLEGV                                       
Sbjct: 61  IIVVDNLPVVPPEKFEKLEGVVRKIFGQIGVIKDDGLWMPVDRTTQKTLGYCFIEYGTPQ 120

Query: 121 EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWPPPEISPYTPRENLQQWLIDEK 172
           EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEW PPE++PYTP ENLQQWL DEK
Sbjct: 121 EAELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWAPPEVNPYTPGENLQQWLTDEK 180

The following BLAST results are available for this feature:

BLAST of Bhi05G001417 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27640.1	1.8e-56	54.37	translation initiation factor 3B1	[more]
AT5G27640.2	1.8e-53	48.28	translation initiation factor 3B1	[more]
AT5G25780.1	3.1e-53	51.98	eukaryotic translation initiation factor 3B-2	[more]

BLAST of Bhi05G001417 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P56821	5.5e-63	58.57	Eukaryotic translation initiation factor 3 subunit B OS=Nicotiana tabacum OX=409...	[more]
Q9C5Z1	2.5e-55	54.37	Eukaryotic translation initiation factor 3 subunit B OS=Arabidopsis thaliana OX=...	[more]
Q569Z1	3.7e-19	34.71	Eukaryotic translation initiation factor 3 subunit B OS=Xenopus laevis OX=8355 G...	[more]
P55884	1.2e-17	32.24	Eukaryotic translation initiation factor 3 subunit B OS=Homo sapiens OX=9606 GN=...	[more]
A7MB16	2.7e-17	31.90	Eukaryotic translation initiation factor 3 subunit B OS=Bos taurus OX=9913 GN=EI...	[more]

BLAST of Bhi05G001417 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UC22	1.5e-79	75.24	Eukaryotic translation initiation factor 3 subunit B OS=Cucumis melo var. makuwa...	[more]
A0A5D3BXF2	1.5e-79	75.24	Eukaryotic translation initiation factor 3 subunit B OS=Cucumis melo var. makuwa...	[more]
A0A1S3CES0	1.5e-79	75.24	Eukaryotic translation initiation factor 3 subunit B OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1F2H0	2.0e-79	75.24	Eukaryotic translation initiation factor 3 subunit B OS=Cucurbita moschata OX=36...	[more]
A0A0A0K4J9	3.3e-79	74.76	Eukaryotic translation initiation factor 3 subunit B OS=Cucumis sativus OX=3659 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011400	Eukaryotic translation initiation factor 3 subunit B	PANTHER	PTHR14068	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED	coord: 6..81 coord: 82..172
None	No IPR available	PANTHER	PTHR14068:SF3	BNACNNG51870D PROTEIN	coord: 6..81 coord: 82..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M001417	Bhi05M001417	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002183	cytoplasmic translational initiation
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
cellular_component	GO:0070993	translation preinitiation complex
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0031369	translation initiation factor binding
molecular_function	GO:0003723	RNA binding