Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCCACTGATTTCTGCCGCTTTCGTTATTGCTGCTGGGTTGGCCGTCGGGCTTGCTTTTATTGGACTTGGGGTAGGTCAAGGTACTGCTGCAGGCCAAGTTGTAGAAGGGATCGCGAGACAACCCGAGGAGGAGGGAAAAATCCGAGGTACTTTATTGCTTAGTCTGGCTTTTATGGAAGCTTTAACTATTTATGGACTGGTTGTAGCATTAGCACTTTTATTTGCGAATCCTTTTGTTTAA
mRNA sequence
ATGAATCCACTGATTTCTGCCGCTTTCGTTATTGCTGCTGGGTTGGCCGTCGGGCTTGCTTTTATTGGACTTGGGGTAGGTCAAGGTACTGCTGCAGGCCAAGTTGTAGAAGGGATCGCGAGACAACCCGAGGAGGAGGGAAAAATCCGAGGTACTTTATTGCTTAGTCTGGCTTTTATGGAAGCTTTAACTATTTATGGACTGGTTGTAGCATTAGCACTTTTATTTGCGAATCCTTTTGTTTAA
Coding sequence (CDS)
ATGAATCCACTGATTTCTGCCGCTTTCGTTATTGCTGCTGGGTTGGCCGTCGGGCTTGCTTTTATTGGACTTGGGGTAGGTCAAGGTACTGCTGCAGGCCAAGTTGTAGAAGGGATCGCGAGACAACCCGAGGAGGAGGGAAAAATCCGAGGTACTTTATTGCTTAGTCTGGCTTTTATGGAAGCTTTAACTATTTATGGACTGGTTGTAGCATTAGCACTTTTATTTGCGAATCCTTTTGTTTAA
Protein sequence
MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
Homology
BLAST of Bhi04G000739 vs. TAIR 10
Match:
ATCG00140.1 (ATP synthase subunit C family protein )
HSP 1 Score: 131.0 bits (328), Expect = 4.4e-31
Identity = 75/81 (92.59%), Postives = 76/81 (93.83%), Query Frame = 0
Query: 1 MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
MNPL+SAA VIAAGLAVGLA IG GVGQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1 MNPLVSAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60
Query: 61 EALTIYGLVVALALLFANPFV 82
EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81
BLAST of Bhi04G000739 vs. ExPASy Swiss-Prot
Match:
Q4FGF2 (ATP synthase subunit c, chloroplastic OS=Acorus americanus OX=263995 GN=atpH PE=3 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 4.8e-30
Identity = 76/81 (93.83%), Postives = 76/81 (93.83%), Query Frame = 0
Query: 1 MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
MNPLISAA VIAAGLAVGLA IG GVGQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60
Query: 61 EALTIYGLVVALALLFANPFV 82
EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81
BLAST of Bhi04G000739 vs. ExPASy Swiss-Prot
Match:
Q3V547 (ATP synthase subunit c, chloroplastic OS=Acorus calamus OX=4465 GN=atpH PE=3 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 4.8e-30
Identity = 76/81 (93.83%), Postives = 76/81 (93.83%), Query Frame = 0
Query: 1 MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
MNPLISAA VIAAGLAVGLA IG GVGQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60
Query: 61 EALTIYGLVVALALLFANPFV 82
EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81
BLAST of Bhi04G000739 vs. ExPASy Swiss-Prot
Match:
Q85FN2 (ATP synthase subunit c, chloroplastic OS=Adiantum capillus-veneris OX=13818 GN=atpH PE=2 SV=2)
HSP 1 Score: 131.3 bits (329), Expect = 4.8e-30
Identity = 76/81 (93.83%), Postives = 76/81 (93.83%), Query Frame = 0
Query: 1 MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
MNPLISAA VIAAGLAVGLA IG GVGQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60
Query: 61 EALTIYGLVVALALLFANPFV 82
EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81
BLAST of Bhi04G000739 vs. ExPASy Swiss-Prot
Match:
A4QJA2 (ATP synthase subunit c, chloroplastic OS=Aethionema cordifolium OX=434059 GN=atpH PE=3 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 4.8e-30
Identity = 76/81 (93.83%), Postives = 76/81 (93.83%), Query Frame = 0
Query: 1 MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
MNPLISAA VIAAGLAVGLA IG GVGQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60
Query: 61 EALTIYGLVVALALLFANPFV 82
EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81
BLAST of Bhi04G000739 vs. ExPASy Swiss-Prot
Match:
A4QJI6 (ATP synthase subunit c, chloroplastic OS=Aethionema grandiflorum OX=72657 GN=atpH PE=3 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 4.8e-30
Identity = 76/81 (93.83%), Postives = 76/81 (93.83%), Query Frame = 0
Query: 1 MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
MNPLISAA VIAAGLAVGLA IG GVGQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60
Query: 61 EALTIYGLVVALALLFANPFV 82
EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81
BLAST of Bhi04G000739 vs. ExPASy TrEMBL
Match:
A0A0D2MD62 (ATP synthase F0 sector subunit C OS=Gossypium raimondii OX=29730 GN=B456_002G196100 PE=3 SV=1)
HSP 1 Score: 133.3 bits (334), Expect = 4.7e-28
Identity = 77/81 (95.06%), Postives = 77/81 (95.06%), Query Frame = 0
Query: 1 MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
MNP ISAA VIAAGLAVGLA IGLGVGQGTAAGQVVEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 17 MNPQISAASVIAAGLAVGLASIGLGVGQGTAAGQVVEGIARQPEAEGKIRGTLLLSLAFM 76
Query: 61 EALTIYGLVVALALLFANPFV 82
EALTIYGLVVALALLFANPFV
Sbjct: 77 EALTIYGLVVALALLFANPFV 97
BLAST of Bhi04G000739 vs. ExPASy TrEMBL
Match:
A0A446LLR5 (ATP synthase F0 sector subunit C OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_2Av1G282970 PE=3 SV=1)
HSP 1 Score: 132.5 bits (332), Expect = 7.9e-28
Identity = 76/81 (93.83%), Postives = 77/81 (95.06%), Query Frame = 0
Query: 1 MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
MNPLI+AA VIAAGLAVGLA IG GVGQGTAAGQ VEGIARQPEEEGKIRGTLLLSLAFM
Sbjct: 1 MNPLIAAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEEEGKIRGTLLLSLAFM 60
Query: 61 EALTIYGLVVALALLFANPFV 82
EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81
BLAST of Bhi04G000739 vs. ExPASy TrEMBL
Match:
K9L5P5 (ATP synthase F0 sector subunit C OS=Chrysanthemum morifolium OX=41568 GN=atpH PE=3 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 1.8e-27
Identity = 76/81 (93.83%), Postives = 76/81 (93.83%), Query Frame = 0
Query: 1 MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
MNPLISAA VIAAGLAVGLA IG GVGQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60
Query: 61 EALTIYGLVVALALLFANPFV 82
EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81
BLAST of Bhi04G000739 vs. ExPASy TrEMBL
Match:
A0A6H1XHY6 (ATP synthase subunit c, chloroplastic OS=Lycoris aurea OX=152838 GN=atpH PE=3 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 1.8e-27
Identity = 76/81 (93.83%), Postives = 76/81 (93.83%), Query Frame = 0
Query: 1 MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
MNPLISAA VIAAGLAVGLA IG GVGQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60
Query: 61 EALTIYGLVVALALLFANPFV 82
EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81
BLAST of Bhi04G000739 vs. ExPASy TrEMBL
Match:
A0A076E6X0 (ATP synthase subunit c, chloroplastic OS=Salix interior OX=75712 GN=atpH PE=3 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 1.8e-27
Identity = 76/81 (93.83%), Postives = 76/81 (93.83%), Query Frame = 0
Query: 1 MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
MNPLISAA VIAAGLAVGLA IG GVGQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60
Query: 61 EALTIYGLVVALALLFANPFV 82
EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
ATCG00140.1 | 4.4e-31 | 92.59 | ATP synthase subunit C family protein | [more] |
Match Name | E-value | Identity | Description | |
Q4FGF2 | 4.8e-30 | 93.83 | ATP synthase subunit c, chloroplastic OS=Acorus americanus OX=263995 GN=atpH PE=... | [more] |
Q3V547 | 4.8e-30 | 93.83 | ATP synthase subunit c, chloroplastic OS=Acorus calamus OX=4465 GN=atpH PE=3 SV=... | [more] |
Q85FN2 | 4.8e-30 | 93.83 | ATP synthase subunit c, chloroplastic OS=Adiantum capillus-veneris OX=13818 GN=a... | [more] |
A4QJA2 | 4.8e-30 | 93.83 | ATP synthase subunit c, chloroplastic OS=Aethionema cordifolium OX=434059 GN=atp... | [more] |
A4QJI6 | 4.8e-30 | 93.83 | ATP synthase subunit c, chloroplastic OS=Aethionema grandiflorum OX=72657 GN=atp... | [more] |
Match Name | E-value | Identity | Description | |
A0A0D2MD62 | 4.7e-28 | 95.06 | ATP synthase F0 sector subunit C OS=Gossypium raimondii OX=29730 GN=B456_002G196... | [more] |
A0A446LLR5 | 7.9e-28 | 93.83 | ATP synthase F0 sector subunit C OS=Triticum turgidum subsp. durum OX=4567 GN=TR... | [more] |
K9L5P5 | 1.8e-27 | 93.83 | ATP synthase F0 sector subunit C OS=Chrysanthemum morifolium OX=41568 GN=atpH PE... | [more] |
A0A6H1XHY6 | 1.8e-27 | 93.83 | ATP synthase subunit c, chloroplastic OS=Lycoris aurea OX=152838 GN=atpH PE=3 SV... | [more] |
A0A076E6X0 | 1.8e-27 | 93.83 | ATP synthase subunit c, chloroplastic OS=Salix interior OX=75712 GN=atpH PE=3 SV... | [more] |