Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACAGTTACGGTTGGTTCGTCTTGGTCAGCTTAGATCGAAATTCCTAGAGAGAATCATTTGGGTTGTCTTTTATCTTCTACCCTTGTTTTCCAGTGTGAAGAACATTCCTAGAGAGAATCAGTCTGTCCATTTGAGGGAAGAAACACATGTAAGACAAGACCATATTTCTGGTGAAGGCCGTGCAAGGCGAAAGAAGTCATATGGGGGCATTTTAGATGTCAGCAGTCTACAAATGCTCAAGGAGAAGAGAAATATATCTTGCCTTCTATCTTATGTGCTTCACAACACAAAACCTGTTGGTCACCAGGTATGTACATGTCTCAACGTTGTCCAAGCTTCAACGCATGGTTAGTATGGTTTTAAGTTTGGAGGGTGTGTCATAGGACCTTACATGTGGTGATGGTTCTTTTTCCAATTTGTTGATTTAGTCATATCAATGTTACTTCTGGGATTTCAGCTTAGTTTTGCTTACTCTGCTCTAGATGTTTTCATTCTCATTGGCAGACGTTTTTCTAGTTTTGTTTATTTTGCCTCTCGGCGTTCTCCTTCCGTTCCTGCTGGAATCAATGCCTTATTCAGCCGAGGACCTAGGCGTTCTGCAGGCCTCGCTCGTATCTATGCATTGTGGAACATCACATCCTTGGTCAATGTTGTAAGTTCATAACTCTCACTTCCATTACCTGAACATTCAAGCCAACCCTGTTTGTGTTCACTACTCTCTTAACTTCCTCATCAATCCCATCTGATGGTTTCTTTACCTTTTTGACCAGTTGGTTGCACTTCTCTGTGGATATGTTCACTCTAAATCTCAATCGTCGAAACATCCAAGCTAATCAGCCATGGACTATTAACATGTGAGGTTCTTCATGTGCTGAAAATAAGTACCATTTACTTCCATTGGAACCCCAAACTGATGAGACGGGATAGATAATACGTGATTTGTGTTTTTGCAGGGATGAAAGCGGATGGTGGATTTTCCCAGCGGGATTGGTTGCTTGTAAATTTCTCCAATCCCGACTCATTAATTGGCATGTTGCGAATCTCGAGATCCAAGATCGATCCTTGTCCAGTAATGAGTTCGATATGTTCTGGCAGTCCTGA
mRNA sequence
ATGCACAGTTACGGTTGTGTGAAGAACATTCCTAGAGAGAATCAGTCTGTCCATTTGAGGGAAGAAACACATGTAAGACAAGACCATATTTCTGGTGAAGGCCGTGCAAGGCGAAAGAAGTCATATGGGGGCATTTTAGATGTCAGCAGTCTACAAATGCTCAAGGAGAAGAGAAATATATCTTGCCTTCTATCTTATGTGCTTCACAACACAAAACCTGTTGGTCACCAGCTTAGTTTTGCTTACTCTGCTCTAGATGTTTTCATTCTCATTGGCAGACGTTTTTCTAGTTTTGTTTATTTTGCCTCTCGGCGTTCTCCTTCCGTTCCTGCTGGAATCAATGCCTTATTCAGCCGAGGACCTAGGCGTTCTGCAGGCCTCGCTCGGATGAAAGCGGATGGTGGATTTTCCCAGCGGGATTGGTTGCTTGTAAATTTCTCCAATCCCGACTCATTAATTGGCATGTTGCGAATCTCGAGATCCAAGATCGATCCTTGTCCAGTAATGAGTTCGATATGTTCTGGCAGTCCTGA
Coding sequence (CDS)
ATGCACAGTTACGGTTGTGTGAAGAACATTCCTAGAGAGAATCAGTCTGTCCATTTGAGGGAAGAAACACATGTAAGACAAGACCATATTTCTGGTGAAGGCCGTGCAAGGCGAAAGAAGTCATATGGGGGCATTTTAGATGTCAGCAGTCTACAAATGCTCAAGGAGAAGAGAAATATATCTTGCCTTCTATCTTATGTGCTTCACAACACAAAACCTGTTGGTCACCAGCTTAGTTTTGCTTACTCTGCTCTAGATGTTTTCATTCTCATTGGCAGACGTTTTTCTAGTTTTGTTTATTTTGCCTCTCGGCGTTCTCCTTCCGTTCCTGCTGGAATCAATGCCTTATTCAGCCGAGGACCTAGGCGTTCTGCAGGCCTCGCTCGGATGAAAGCGGATGGTGGATTTTCCCAGCGGGATTGGTTGCTTGTAAATTTCTCCAATCCCGACTCATTAATTGGCATGTTGCGAATCTCGAGATCCAAGATCGATCCTTGTCCAGTAATGAGTTCGATATGTTCTGGCAGTCCTGA
Protein sequence
MHSYGCVKNIPRENQSVHLREETHVRQDHISGEGRARRKKSYGGILDVSSLQMLKEKRNISCLLSYVLHNTKPVGHQLSFAYSALDVFILIGRRFSSFVYFASRRSPSVPAGINALFSRGPRRSAGLARMKADGGFSQRDWLLVNFSNPDSLIGMLRISRSKIDPCPVMSSICSGSP
Homology
BLAST of Bhi04G000721 vs. TAIR 10
Match:
AT5G11700.2 (BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 8203 Blast hits to 3102 proteins in 389 species: Archae - 3; Bacteria - 5624; Metazoa - 852; Fungi - 139; Plants - 704; Viruses - 77; Other Eukaryotes - 804 (source: NCBI BLink). )
HSP 1 Score: 94.7 bits (234), Expect = 7.7e-20
Identity = 66/155 (42.58%), Postives = 83/155 (53.55%), Query Frame = 0
Query: 1 MHSYGCVKNIPRENQSVHLREETHVRQDHISGEGRARRKKSYGGILDVSSLQMLKEKRNI 60
M SY V N +EN HLRE Q H + E R+K+YGGI+D+ SL LKEKR++
Sbjct: 1242 MFSYYGV-NAHKENSPPHLRESRLFNQPHSNTEDYTTRRKNYGGIIDLDSLPSLKEKRDM 1301
Query: 61 SCLLSYVLHNTKPVGHQ-----------------------LSFAYSALDVFILIGRRFSS 120
LLS+++HNTKPVGHQ ++ S LDV + +
Sbjct: 1302 FFLLSFLVHNTKPVGHQDMVGLVISMLLLGDFSLVLLTLLQLYSISLLDVLLAL------ 1361
Query: 121 FVYFASRRSPSVPAGINALFSRGPRRSAGLARMKA 133
F+ P PAGINALFS GPRRSAGLAR+ A
Sbjct: 1362 FILPLGLLLP-FPAGINALFSHGPRRSAGLARVYA 1388
BLAST of Bhi04G000721 vs. TAIR 10
Match:
AT5G11700.1 (LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 78.6 bits (192), Expect = 5.7e-15
Identity = 51/117 (43.59%), Postives = 66/117 (56.41%), Query Frame = 0
Query: 39 KKSYGGILDVSSLQMLKEKRNISCLLSYVLHNTKPVGHQ--------------------- 98
+K+YGGI+D+ SL LKEKR++ LLS+++HNTKPVGHQ
Sbjct: 1222 RKNYGGIIDLDSLPSLKEKRDMFFLLSFLVHNTKPVGHQDMVGLVISMLLLGDFSLVLLT 1281
Query: 99 --LSFAYSALDVFILIGRRFSSFVYFASRRSPSVPAGINALFSRGPRRSAGLARMKA 133
++ S LDV + + F+ P PAGINALFS GPRRSAGLAR+ A
Sbjct: 1282 LLQLYSISLLDVLLAL------FILPLGLLLP-FPAGINALFSHGPRRSAGLARVYA 1331
BLAST of Bhi04G000721 vs. TAIR 10
Match:
AT4G32920.1 (glycine-rich protein )
HSP 1 Score: 64.3 bits (155), Expect = 1.1e-10
Identity = 47/143 (32.87%), Postives = 70/143 (48.95%), Query Frame = 0
Query: 13 ENQSVHLREETHVRQDHISGEGRARRKKSYGGILDVSSLQMLKEKRNISCLLSYVLHNTK 72
EN S RE + I+ R + G I+D+ SLQ LKE++++ L+S+++HNTK
Sbjct: 1213 ENHSGDFRENFQPLRSEINHV----RHQECGEIIDIGSLQFLKEEKDVLSLISFLIHNTK 1272
Query: 73 PVGHQ-----------------------LSFAYSALDVFILIGRRFSSFVYFASRRSPSV 132
PVGHQ ++ S L+VF+ + S ++
Sbjct: 1273 PVGHQDLVGLVISVLLLGDLTLTLLTLLQLYSISLLEVFLAMFILPLSIIF-------PF 1332
BLAST of Bhi04G000721 vs. TAIR 10
Match:
AT4G32920.2 (glycine-rich protein )
HSP 1 Score: 64.3 bits (155), Expect = 1.1e-10
Identity = 47/143 (32.87%), Postives = 70/143 (48.95%), Query Frame = 0
Query: 13 ENQSVHLREETHVRQDHISGEGRARRKKSYGGILDVSSLQMLKEKRNISCLLSYVLHNTK 72
EN S RE + I+ R + G I+D+ SLQ LKE++++ L+S+++HNTK
Sbjct: 1213 ENHSGDFRENFQPLRSEINHV----RHQECGEIIDIGSLQFLKEEKDVLSLISFLIHNTK 1272
Query: 73 PVGHQ-----------------------LSFAYSALDVFILIGRRFSSFVYFASRRSPSV 132
PVGHQ ++ S L+VF+ + S ++
Sbjct: 1273 PVGHQDLVGLVISVLLLGDLTLTLLTLLQLYSISLLEVFLAMFILPLSIIF-------PF 1332
BLAST of Bhi04G000721 vs. TAIR 10
Match:
AT4G32920.3 (glycine-rich protein )
HSP 1 Score: 64.3 bits (155), Expect = 1.1e-10
Identity = 47/143 (32.87%), Postives = 70/143 (48.95%), Query Frame = 0
Query: 13 ENQSVHLREETHVRQDHISGEGRARRKKSYGGILDVSSLQMLKEKRNISCLLSYVLHNTK 72
EN S RE + I+ R + G I+D+ SLQ LKE++++ L+S+++HNTK
Sbjct: 1213 ENHSGDFRENFQPLRSEINHV----RHQECGEIIDIGSLQFLKEEKDVLSLISFLIHNTK 1272
Query: 73 PVGHQ-----------------------LSFAYSALDVFILIGRRFSSFVYFASRRSPSV 132
PVGHQ ++ S L+VF+ + S ++
Sbjct: 1273 PVGHQDLVGLVISVLLLGDLTLTLLTLLQLYSISLLEVFLAMFILPLSIIF-------PF 1332
BLAST of Bhi04G000721 vs. ExPASy TrEMBL
Match:
A0A0A0LLG8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G372850 PE=4 SV=1)
HSP 1 Score: 156.8 bits (395), Expect = 8.6e-35
Identity = 90/149 (60.40%), Postives = 104/149 (69.80%), Query Frame = 0
Query: 7 VKNIPRENQSVHLREETHVRQDHISGEGRARRKKSYGGILDVSSLQMLKEKRNISCLLSY 66
VK+IPRENQS+H REETH+RQDHIS EGRARRKKSYGGILDVSSLQML+EKR+ISC+LSY
Sbjct: 1221 VKDIPRENQSLHSREETHIRQDHISSEGRARRKKSYGGILDVSSLQMLQEKRSISCILSY 1280
Query: 67 VLHNTKPVGHQ-----------------------LSFAYSALDVFILIGRRFSSFVYFAS 126
VLHNTKPVGHQ F++S DVF+++ F+
Sbjct: 1281 VLHNTKPVGHQDLVGLVISMLLLGDFSLVLLTLLQMFSFSLADVFLVL------FILPLG 1340
Query: 127 RRSPSVPAGINALFSRGPRRSAGLARMKA 133
P PAGINALFS+GPRRSAGLAR+ A
Sbjct: 1341 ILLP-FPAGINALFSQGPRRSAGLARIYA 1362
BLAST of Bhi04G000721 vs. ExPASy TrEMBL
Match:
A0A5A7VHV7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003880 PE=4 SV=1)
HSP 1 Score: 152.1 bits (383), Expect = 2.1e-33
Identity = 89/149 (59.73%), Postives = 102/149 (68.46%), Query Frame = 0
Query: 7 VKNIPRENQSVHLREETHVRQDHISGEGRARRKKSYGGILDVSSLQMLKEKRNISCLLSY 66
VKNIPRENQS+ REETH+RQDHIS EG ARRKKSYGGILDVSSLQML+EKR+ISC+LSY
Sbjct: 1200 VKNIPRENQSLLSREETHIRQDHISSEGHARRKKSYGGILDVSSLQMLQEKRSISCVLSY 1259
Query: 67 VLHNTKPVGHQ-----------------------LSFAYSALDVFILIGRRFSSFVYFAS 126
VLHNTKPVGHQ F++S DVF+++ F+
Sbjct: 1260 VLHNTKPVGHQDLVGLVISMLLLGDFSLVLLTLLQMFSFSLADVFLVL------FILPLG 1319
Query: 127 RRSPSVPAGINALFSRGPRRSAGLARMKA 133
P PAGINALFS+GPRRSAGLAR+ A
Sbjct: 1320 ILLP-FPAGINALFSQGPRRSAGLARIYA 1341
BLAST of Bhi04G000721 vs. ExPASy TrEMBL
Match:
A0A1S3BCE0 (uncharacterized protein LOC103488163 OS=Cucumis melo OX=3656 GN=LOC103488163 PE=4 SV=1)
HSP 1 Score: 152.1 bits (383), Expect = 2.1e-33
Identity = 89/149 (59.73%), Postives = 102/149 (68.46%), Query Frame = 0
Query: 7 VKNIPRENQSVHLREETHVRQDHISGEGRARRKKSYGGILDVSSLQMLKEKRNISCLLSY 66
VKNIPRENQS+ REETH+RQDHIS EG ARRKKSYGGILDVSSLQML+EKR+ISC+LSY
Sbjct: 1221 VKNIPRENQSLLSREETHIRQDHISSEGHARRKKSYGGILDVSSLQMLQEKRSISCVLSY 1280
Query: 67 VLHNTKPVGHQ-----------------------LSFAYSALDVFILIGRRFSSFVYFAS 126
VLHNTKPVGHQ F++S DVF+++ F+
Sbjct: 1281 VLHNTKPVGHQDLVGLVISMLLLGDFSLVLLTLLQMFSFSLADVFLVL------FILPLG 1340
Query: 127 RRSPSVPAGINALFSRGPRRSAGLARMKA 133
P PAGINALFS+GPRRSAGLAR+ A
Sbjct: 1341 ILLP-FPAGINALFSQGPRRSAGLARIYA 1362
BLAST of Bhi04G000721 vs. ExPASy TrEMBL
Match:
A0A6J1K5W6 (uncharacterized protein LOC111491974 OS=Cucurbita maxima OX=3661 GN=LOC111491974 PE=4 SV=1)
HSP 1 Score: 144.1 bits (362), Expect = 5.8e-31
Identity = 84/150 (56.00%), Postives = 100/150 (66.67%), Query Frame = 0
Query: 6 CVKNIPRENQSVHLREETHVRQDHISGEGRARRKKSYGGILDVSSLQMLKEKRNISCLLS 65
CVKNIPRENQS+ REETH+ Q+H+S EG A+RKK YGGILDVSSLQML+EKR++SC LS
Sbjct: 1220 CVKNIPRENQSLLSREETHLSQNHVSTEGSAKRKKRYGGILDVSSLQMLEEKRDVSCPLS 1279
Query: 66 YVLHNTKPVGHQ-----------------------LSFAYSALDVFILIGRRFSSFVYFA 125
YVLHNTKPVGHQ F++S DVF+++ F+
Sbjct: 1280 YVLHNTKPVGHQDLVGLVISMLLLGDFSLVLLTLLQMFSFSLADVFLVL------FILPL 1339
Query: 126 SRRSPSVPAGINALFSRGPRRSAGLARMKA 133
P PAGINALFS+GPRRSAGLAR+ A
Sbjct: 1340 GILLP-FPAGINALFSQGPRRSAGLARVYA 1362
BLAST of Bhi04G000721 vs. ExPASy TrEMBL
Match:
A0A6J1HEQ8 (uncharacterized protein LOC111462376 OS=Cucurbita moschata OX=3662 GN=LOC111462376 PE=4 SV=1)
HSP 1 Score: 144.1 bits (362), Expect = 5.8e-31
Identity = 84/150 (56.00%), Postives = 100/150 (66.67%), Query Frame = 0
Query: 6 CVKNIPRENQSVHLREETHVRQDHISGEGRARRKKSYGGILDVSSLQMLKEKRNISCLLS 65
CVKNIPRENQS+ REETH+ Q+H+S EG A+RKK YGGILDVSSLQML+EKR++SC LS
Sbjct: 1220 CVKNIPRENQSLLSREETHLSQNHVSTEGSAKRKKRYGGILDVSSLQMLEEKRDVSCPLS 1279
Query: 66 YVLHNTKPVGHQ-----------------------LSFAYSALDVFILIGRRFSSFVYFA 125
YVLHNTKPVGHQ F++S DVF+++ F+
Sbjct: 1280 YVLHNTKPVGHQDLVGLVISMLLLGDFSLVLLTLLQMFSFSLADVFLVL------FILPL 1339
Query: 126 SRRSPSVPAGINALFSRGPRRSAGLARMKA 133
P PAGINALFS+GPRRSAGLAR+ A
Sbjct: 1340 GILLP-FPAGINALFSQGPRRSAGLARVYA 1362
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LLG8 | 8.6e-35 | 60.40 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G372850 PE=4 SV=1 | [more] |
A0A5A7VHV7 | 2.1e-33 | 59.73 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A1S3BCE0 | 2.1e-33 | 59.73 | uncharacterized protein LOC103488163 OS=Cucumis melo OX=3656 GN=LOC103488163 PE=... | [more] |
A0A6J1K5W6 | 5.8e-31 | 56.00 | uncharacterized protein LOC111491974 OS=Cucurbita maxima OX=3661 GN=LOC111491974... | [more] |
A0A6J1HEQ8 | 5.8e-31 | 56.00 | uncharacterized protein LOC111462376 OS=Cucurbita moschata OX=3662 GN=LOC1114623... | [more] |