Bhi01G001406 (gene) Wax gourd (B227) v1

Overview
NameBhi01G001406
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionATP synthase subunit a
Locationchr1: 40385360 .. 40385818 (+)
RNA-Seq ExpressionBhi01G001406
SyntenyBhi01G001406
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAAATTGATTCCAGTGTCGCAGAGAACATTATGTCTCGCGATCTGGAAATATCTGCGGAGATGGATACTGAACCCCTCCGCGGATGGGTGGAGGAGAGAAAGAAGAACCCTAATCTCTTAAAATCCCTCATTAGGGAGTCTGTCGCTTTCTTTCATAACAGAGCCGAGAATAACAGCTGGCATAGTTGTCTCTCGCATGCAAGCAAGGAGATGCTGCTGCTGGATGTCACGGTTCTGGGGCGCCATGATCCTTTTCTCTGGAACAATCGAGGGCACTGCCTTCCTTCCGCTTTCAGAGGTAGGGACTTCATCAATCATCGCTCAGTGAGCTATTTATTGCCGCCCATAGCGCTTCACTTGCACGGCAGCGCCACGCCTGGTAGAGCTATCGCGCGCGGGCGAAGGAGATGCATTTTTTGTACTGGTAGTACTGGACAAGCTCAGAGGGAATAA

mRNA sequence

ATGGCAGAAATTGATTCCAGTGTCGCAGAGAACATTATGTCTCGCGATCTGGAAATATCTGCGGAGATGGATACTGAACCCCTCCGCGGATGGGTGGAGGAGAGAAAGAAGAACCCTAATCTCTTAAAATCCCTCATTAGGGAGTCTGTCGCTTTCTTTCATAACAGAGCCGAGAATAACAGCTGGCATAGTTGTCTCTCGCATGCAAGCAAGGAGATGCTGCTGCTGGATGTCACGGTTCTGGGGCGCCATGATCCTTTTCTCTGGAACAATCGAGGGCACTGCCTTCCTTCCGCTTTCAGAGGTAGGGACTTCATCAATCATCGCTCAGTGAGCTATTTATTGCCGCCCATAGCGCTTCACTTGCACGGCAGCGCCACGCCTGGTAGAGCTATCGCGCGCGGGCGAAGGAGATGCATTTTTTGTACTGGTAGTACTGGACAAGCTCAGAGGGAATAA

Coding sequence (CDS)

ATGGCAGAAATTGATTCCAGTGTCGCAGAGAACATTATGTCTCGCGATCTGGAAATATCTGCGGAGATGGATACTGAACCCCTCCGCGGATGGGTGGAGGAGAGAAAGAAGAACCCTAATCTCTTAAAATCCCTCATTAGGGAGTCTGTCGCTTTCTTTCATAACAGAGCCGAGAATAACAGCTGGCATAGTTGTCTCTCGCATGCAAGCAAGGAGATGCTGCTGCTGGATGTCACGGTTCTGGGGCGCCATGATCCTTTTCTCTGGAACAATCGAGGGCACTGCCTTCCTTCCGCTTTCAGAGGTAGGGACTTCATCAATCATCGCTCAGTGAGCTATTTATTGCCGCCCATAGCGCTTCACTTGCACGGCAGCGCCACGCCTGGTAGAGCTATCGCGCGCGGGCGAAGGAGATGCATTTTTTGTACTGGTAGTACTGGACAAGCTCAGAGGGAATAA

Protein sequence

MAEIDSSVAENIMSRDLEISAEMDTEPLRGWVEERKKNPNLLKSLIRESVAFFHNRAENNSWHSCLSHASKEMLLLDVTVLGRHDPFLWNNRGHCLPSAFRGRDFINHRSVSYLLPPIALHLHGSATPGRAIARGRRRCIFCTGSTGQAQRE
Homology
[Close]
BLAST of Bhi01G001406 vs. NCBI nr
Match: KAB8468460.1 (hypothetical protein FH972_025294 [Carpinus fangiana])

HSP 1 Score: 104.8 bits (260), Expect = 6.9e-19
Identity = 51/58 (87.93%), Postives = 51/58 (87.93%), Query Frame = 0 

Query: 67  SHASKEMLLLDVTVLGR-HDPFLWNNRGHCLPSAFRGRDFINHRSVSYLLPPIALHLH 124
           S A KEMLLLDVTV GR HDPFLWNNRGHCLPSAFRGR  INHRSVSYLLPPIAL LH
Sbjct: 91  SLARKEMLLLDVTVPGRHHDPFLWNNRGHCLPSAFRGRGGINHRSVSYLLPPIALRLH 148

[Close]
BLAST of Bhi01G001406 vs. NCBI nr
Match: KAF3961630.1 (hypothetical protein CMV_013772 [Castanea mollissima])

HSP 1 Score: 102.8 bits (255), Expect = 2.6e-18
Identity = 46/51 (90.20%), Postives = 47/51 (92.16%), Query Frame = 0 

Query: 73  MLLLDVTVLGRHDPFLWNNRGHCLPSAFRGRDFINHRSVSYLLPPIALHLH 124
           MLLLDVTVLGRHDP LWNNRGHCLPSAF+GR  INHRSVSYLLPPIAL LH
Sbjct: 1   MLLLDVTVLGRHDPSLWNNRGHCLPSAFKGRGCINHRSVSYLLPPIALRLH 51

[Close]
BLAST of Bhi01G001406 vs. NCBI nr
Match: TXG46224.1 (hypothetical protein EZV62_028255 [Acer yangbiense])

HSP 1 Score: 102.4 bits (254), Expect = 3.4e-18
Identity = 46/51 (90.20%), Postives = 46/51 (90.20%), Query Frame = 0 

Query: 73  MLLLDVTVLGRHDPFLWNNRGHCLPSAFRGRDFINHRSVSYLLPPIALHLH 124
           MLLLDVTVLG HDP LWNNRGHCLPSAFRG  FINHRSVSYLLPPIAL LH
Sbjct: 1   MLLLDVTVLGHHDPSLWNNRGHCLPSAFRGGGFINHRSVSYLLPPIALRLH 51

[Close]
BLAST of Bhi01G001406 vs. NCBI nr
Match: KAF3944854.1 (hypothetical protein CMV_028715 [Castanea mollissima])

HSP 1 Score: 85.9 bits (211), Expect = 3.3e-13
Identity = 38/48 (79.17%), Postives = 40/48 (83.33%), Query Frame = 0 

Query: 76  LDVTVLGRHDPFLWNNRGHCLPSAFRGRDFINHRSVSYLLPPIALHLH 124
           ++VTVLG HDP LWNNRGHCLPSAF  R  INH SVSYLLPPIAL LH
Sbjct: 17  IEVTVLGCHDPSLWNNRGHCLPSAFNVRGCINHHSVSYLLPPIALRLH 64

[Close]
BLAST of Bhi01G001406 vs. NCBI nr
Match: PKI36994.1 (hypothetical protein CRG98_042616 [Punica granatum])

HSP 1 Score: 83.6 bits (205), Expect = 1.6e-12
Identity = 42/48 (87.50%), Postives = 45/48 (93.75%), Query Frame = 0 

Query: 1  MAEIDSSVAENIMSRDLEISAEMDTEPLRGWVEERKKNPNLLKSLIRE 49
          MA +DSSVAENIMSRDLEISAEMDTE LRGWVEE K+NPNLLKS+IRE
Sbjct: 1  MAPVDSSVAENIMSRDLEISAEMDTETLRGWVEEIKENPNLLKSIIRE 48

[Close]
BLAST of Bhi01G001406 vs. ExPASy TrEMBL
Match: A0A5N6L0Z7 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_025294 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 3.3e-19
Identity = 51/58 (87.93%), Postives = 51/58 (87.93%), Query Frame = 0 

Query: 67  SHASKEMLLLDVTVLGR-HDPFLWNNRGHCLPSAFRGRDFINHRSVSYLLPPIALHLH 124
           S A KEMLLLDVTV GR HDPFLWNNRGHCLPSAFRGR  INHRSVSYLLPPIAL LH
Sbjct: 91  SLARKEMLLLDVTVPGRHHDPFLWNNRGHCLPSAFRGRGGINHRSVSYLLPPIALRLH 148

[Close]
BLAST of Bhi01G001406 vs. ExPASy TrEMBL
Match: A0A5C7GN69 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_028255 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.7e-18
Identity = 46/51 (90.20%), Postives = 46/51 (90.20%), Query Frame = 0 

Query: 73  MLLLDVTVLGRHDPFLWNNRGHCLPSAFRGRDFINHRSVSYLLPPIALHLH 124
           MLLLDVTVLG HDP LWNNRGHCLPSAFRG  FINHRSVSYLLPPIAL LH
Sbjct: 1   MLLLDVTVLGHHDPSLWNNRGHCLPSAFRGGGFINHRSVSYLLPPIALRLH 51

[Close]
BLAST of Bhi01G001406 vs. ExPASy TrEMBL
Match: A0A5C7GR59 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027800 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.7e-18
Identity = 46/51 (90.20%), Postives = 46/51 (90.20%), Query Frame = 0 

Query: 73  MLLLDVTVLGRHDPFLWNNRGHCLPSAFRGRDFINHRSVSYLLPPIALHLH 124
           MLLLDVTVLG HDP LWNNRGHCLPSAFRG  FINHRSVSYLLPPIAL LH
Sbjct: 1   MLLLDVTVLGHHDPSLWNNRGHCLPSAFRGGGFINHRSVSYLLPPIALRLH 51

[Close]
BLAST of Bhi01G001406 vs. ExPASy TrEMBL
Match: A0A2I0HZ50 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_042616 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 7.9e-13
Identity = 42/48 (87.50%), Postives = 45/48 (93.75%), Query Frame = 0 

Query: 1  MAEIDSSVAENIMSRDLEISAEMDTEPLRGWVEERKKNPNLLKSLIRE 49
          MA +DSSVAENIMSRDLEISAEMDTE LRGWVEE K+NPNLLKS+IRE
Sbjct: 1  MAPVDSSVAENIMSRDLEISAEMDTETLRGWVEEIKENPNLLKSIIRE 48

[Close]
BLAST of Bhi01G001406 vs. ExPASy TrEMBL
Match: A0A2N9J977 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61714 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 7.9e-13
Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 0 

Query: 1   MAEIDSSVAENIMSRDLEISAEMDTEPLRGWVEERKKNPNLLKSLIRE 49
           MAEI SSVAENIMSRDLEISAEMDTE LRGWVEE K+NPNLLKSLIRE
Sbjct: 75  MAEIYSSVAENIMSRDLEISAEMDTETLRGWVEEIKENPNLLKSLIRE 122

The following BLAST results are available for this feature:
BLAST of Bhi01G001406 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi01G001406 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi01G001406 vs. NCBI nr
Match NameE-valueIdentityDescription
KAB8468460.16.9e-1987.93hypothetical protein FH972_025294 [Carpinus fangiana][more]
KAF3961630.12.6e-1890.20hypothetical protein CMV_013772 [Castanea mollissima][more]
TXG46224.13.4e-1890.20hypothetical protein EZV62_028255 [Acer yangbiense][more]
KAF3944854.13.3e-1379.17hypothetical protein CMV_028715 [Castanea mollissima][more]
PKI36994.11.6e-1287.50hypothetical protein CRG98_042616 [Punica granatum][more]
BLAST of Bhi01G001406 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5N6L0Z73.3e-1987.93Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_025294 PE=4 SV=1[more]
A0A5C7GN691.7e-1890.20Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_028255 PE=3 SV=1[more]
A0A5C7GR591.7e-1890.20Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027800 PE=3 SV=1[more]
A0A2I0HZ507.9e-1387.50Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_042616 PE=4 SV=1[more]
A0A2N9J9777.9e-1391.67Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61714 PE=4 SV=1[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M001406Bhi01M001406mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function GO:0051287 NAD binding
molecular_function GO:0016651 oxidoreductase activity, acting on NAD(P)H
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0048038 quinone binding