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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGATCCATATTCTGCCAAGCTTTGCAGAGAAGCTACGCAGCAAGGATTTATCAACAGCCGGTCACAACTTCCTCTCTATCTTTGCACAGCCCTTTGATTTCCCAGCAACTACTAGACTGGCTTTGTTGGCGACGAGATGTCTGGCTGAATTGCTGGTATGGCTTTTAGATTCGCTCCTGTTATTATTTTAAACTCGTCTTCTATGGATGGATGGGCTAAGTATTGGTGCTGTGCTGAAGCATTTTCCCTTGATTCCTAAGATGTGTGTTATGTTGTCTATTGCCCCTTCTGCCACTTATTAGGATTTTCTTGCTGTTGAAGATTGGAACATTGAGCAATGCAGTTACAGCATTTACTTTCAAACTTGGATTGCCCGGTTTCAATGTCACCGGAAATGGTATCTCTTACCTCGGAAATTATCCTTTCGGTTATCCAATACTGTTTTTGCTTGTAACTGGAGTTCATGTACAGCTTGTATTTGGTGTTCATTGCAAGTTCTCCAAGCTTACAAATTTTCTCAGGTGCAAATCCCCCAATGTCCCCACAGGCTTAAAATCATTGAGTGTAAGGCTATCTTAG mRNA sequence ATGATCCATATTCTGCCAAGCTTTGCAGAGAAGCTACGCAGCAAGGATTTATCAACAGCCGGTCACAACTTCCTCTCTATCTTTGCACAGCCCTTTGATTTCCCAGCAACTACTAGACTGGCTTTGTTGGCGACGAGATGTCTGGCTGAATTGCTGATTGGAACATTGAGCAATGCAGTTACAGCATTTACTTTCAAACTTGGATTGCCCGGTTTCAATGTCACCGGAAATGGTATCTCTTACCTCGGAAATTATCCTTTCGGTTATCCAATACTGTTTTTGCTTGTAACTGGAGTTCATGTACAGCTTGTATTTGGTGTTCATTGCAAGTTCTCCAAGCTTACAAATTTTCTCAGGTGCAAATCCCCCAATGTCCCCACAGGCTTAAAATCATTGAGTGTAAGGCTATCTTAG Coding sequence (CDS) ATGATCCATATTCTGCCAAGCTTTGCAGAGAAGCTACGCAGCAAGGATTTATCAACAGCCGGTCACAACTTCCTCTCTATCTTTGCACAGCCCTTTGATTTCCCAGCAACTACTAGACTGGCTTTGTTGGCGACGAGATGTCTGGCTGAATTGCTGATTGGAACATTGAGCAATGCAGTTACAGCATTTACTTTCAAACTTGGATTGCCCGGTTTCAATGTCACCGGAAATGGTATCTCTTACCTCGGAAATTATCCTTTCGGTTATCCAATACTGTTTTTGCTTGTAACTGGAGTTCATGTACAGCTTGTATTTGGTGTTCATTGCAAGTTCTCCAAGCTTACAAATTTTCTCAGGTGCAAATCCCCCAATGTCCCCACAGGCTTAAAATCATTGAGTGTAAGGCTATCTTAG Protein sequence MIHILPSFAEKLRSKDLSTAGHNFLSIFAQPFDFPATTRLALLATRCLAELLIGTLSNAVTAFTFKLGLPGFNVTGNGISYLGNYPFGYPILFLLVTGVHVQLVFGVHCKFSKLTNFLRCKSPNVPTGLKSLSVRLS*
Homology
BLAST of CsaV3_6G001950 vs. NCBI nr
Match: KGN45801.1 (hypothetical protein Csa_005162 [Cucumis sativus]) HSP 1 Score: 275.0 bits (702), Expect = 3.5e-70 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0 Query: 1 MIHILPSFAEKLRSKDLSTAGHNFLSIFAQPFDFPATTRLALLATRCLAELLIGTLSNAV 60 MIHILPSFAEKLRSKDLSTAGHNFLSIFAQPFDFPATTRLALLATRCLAELLIGTLSNAV Sbjct: 1 MIHILPSFAEKLRSKDLSTAGHNFLSIFAQPFDFPATTRLALLATRCLAELLIGTLSNAV 60
Query: 61 TAFTFKLGLPGFNVTGNGISYLGNYPFGYPILFLLVTGVHVQLVFGVHCKFSKLTNFLRC 120 TAFTFKLGLPGFNVTGNGISYLGNYPFGYPILFLLVTGVHVQLVFGVHCKFSKLTNFLRC Sbjct: 61 TAFTFKLGLPGFNVTGNGISYLGNYPFGYPILFLLVTGVHVQLVFGVHCKFSKLTNFLRC 120
Query: 121 KSPNVPTGLKSLSVRLS 138 KSPNVPTGLKSLSVRLS Sbjct: 121 KSPNVPTGLKSLSVRLS 137
BLAST of CsaV3_6G001950 vs. ExPASy TrEMBL
Match: A0A0A0KDD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G012260 PE=4 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 1.7e-70 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0 Query: 1 MIHILPSFAEKLRSKDLSTAGHNFLSIFAQPFDFPATTRLALLATRCLAELLIGTLSNAV 60 MIHILPSFAEKLRSKDLSTAGHNFLSIFAQPFDFPATTRLALLATRCLAELLIGTLSNAV Sbjct: 1 MIHILPSFAEKLRSKDLSTAGHNFLSIFAQPFDFPATTRLALLATRCLAELLIGTLSNAV 60
Query: 61 TAFTFKLGLPGFNVTGNGISYLGNYPFGYPILFLLVTGVHVQLVFGVHCKFSKLTNFLRC 120 TAFTFKLGLPGFNVTGNGISYLGNYPFGYPILFLLVTGVHVQLVFGVHCKFSKLTNFLRC Sbjct: 61 TAFTFKLGLPGFNVTGNGISYLGNYPFGYPILFLLVTGVHVQLVFGVHCKFSKLTNFLRC 120
Query: 121 KSPNVPTGLKSLSVRLS 138 KSPNVPTGLKSLSVRLS Sbjct: 121 KSPNVPTGLKSLSVRLS 137
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KGN45801.1 | 3.5e-70 | 100.00 | hypothetical protein Csa_005162 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KDD4 | 1.7e-70 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G012260 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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