Chy12G211210 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G211210
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	ULP_PROTEASE domain-containing protein
Location	chrH12: 7125272 .. 7125966 (+)
RNA-Seq Expression	Chy12G211210
Synteny	Chy12G211210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCACTCATAAAGGAGATTGATCCAATGGATGACGAGCGTGCTTACCTGGATAGAAGTCTTGAAATTTCGACGGCAAAAGGTTACATGGAAGGCCCACCTGCCCTTACTTCTCATTATGTCGAGTATGCCCTTGCATGTACTTATGTCGATCTTCCCTTGCTGCTCCTTAATTATGTTAAGCATCCCCCTATCCCTTCTCGTGTCCAACAACACCATTCTTCTTCTCGAGACAACAATTGCCCCACCGCATCTACGGAGCAACCAACTGAGCCCAATAGATTTTGAGCGACTTTATTACAACCAACATCTACAATGCCTAGAAGCCATATTGGATAAGATGAATGAGTTCTTAGACTGAAATGCAGTCATCCTTTACAGCTAAGTTATCGGCCATAAATGAGCTTTTGATGGTCTTAGTTAAGGTATGATTGTCTTCAAGTTTTCCTATTTCTTGTTTTTGTTTTATTTAAGGAGTAATAATGGTGTTTCTATTGCTTCGTTAATAGGACAAGGCGGTTGACTCCCAACAATACTATGGTGGTGGTGAAGTTCGTCGTTTAATGCACCGGAGGTTCAGAATAGAGTGGACGATGTATTCATGGATGTTCCCACTCCGGACATTGATGACCAGAACGTTGACGACAAGACAGGAACATCAATCAGTGAAGATCCTGGAGATGATATCATATCGATCA

mRNA sequence

GCACTCATAAAGGAGATTGATCCAATGGATGACGAGCGTGCTTACCTGGATAGAAGTCTTGAAATTTCGACGGCAAAAGGTTACATGGAAGGCCCACCTGCCCTTACTTCTCATTATGTCGAGTATGCCCTTGCATGTACTTATGTCGATCTTCCCTTGCTGCTCCTTAATTACCATTCTTCTTCTCGAGACAACAATGAATGAGTTCTTAGACTGAAATGCAGTCATCCTTTACAGCTAAGTTATCGGCCATAAATGAGCTTTTGATGGTCTTAGTTAAGGACAAGGCGGTTGACTCCCAACAATACTATGGTGGTGGTGAAGTTCGTCGTTTAATGCACCGGAGGTTCAGAATAGAGTGGACGATGTATTCATGGATGTTCCCACTCCGGACATTGATGACCAGAACGTTGACGACAAGACAGGAACATCAATCAGTGAAGATCCTGGAGATGATATCATATCGATCA

Coding sequence (CDS)

GCACTCATAAAGGAGATTGATCCAATGGATGACGAGCGTGCTTACCTGGATAGAAGTCTTGAAATTTCGACGGCAAAAGGTTACATGGAAGGCCCACCTGCCCTTACTTCTCATTATGTCGAGTATGCCCTTGCATGTACTTATGTCGATCTTCCCTTGCTGCTCCTTAATTACCATTCTTCTTCTCGAGACAACAATGAATGAGTTCTTAGACTGAAATGCAGTCATCCTTTACAGCTAAGTTATCGGCCATAAATGAGCTTTTGATGGTCTTAGTTAAGGACAAGGCGGTTGACTCCCAACAATACTATGGTGGTGGTGAAGTTCGTCGTTTAATGCACCGGAGGTTCAGAATAGAGTGGACGATGTATTCATGGATGTTCCCACTCCGGACATTGATGACCAGAACGTTGACGACAAGACAGGAACATCAATCAGTGAAGATCCTGGAGATGATATCATATCGATCA

Protein sequence

ALIKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYALACTYVDLPLLLLNYHSSSRDNNE*VLRLKCSHPLQLSYRP*MSF*WS*LRTRRLTPNNTMVVVKFVV*CTGGSE*SGRCIHGCSHSGH**PER*RQDRNINQ*RSWR*YHIDX

Homology

[Close]

BLAST of Chy12G211210 vs. ExPASy TrEMBL
Match: A0A0A0M3R6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701370 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 4.6e-16
Identity = 47/58 (81.03%), Postives = 51/58 (87.93%), Query Frame = 0


Query: 1  ALIKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYALACTYVDLPLLLLNY 59
          ALIKEIDP  DE AYLDRSLEIS A+ Y+EGPPALTSHYV+YALA TYVDLPLLLL +
Sbjct: 2  ALIKEIDPTYDEHAYLDRSLEISRAESYVEGPPALTSHYVKYALAYTYVDLPLLLLMF 59

[Close]

BLAST of Chy12G211210 vs. ExPASy TrEMBL
Match: A0A5D3E0W4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00620 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.1e-06
Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 0


Query: 1   ALIKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYALACTYVDLPLLLL 57
           A I+EID MDDE AYLD S+EI T +GYME P     H VE+ +A T+V+ PLLLL
Sbjct: 45  ARIEEIDLMDDEHAYLDWSIEIPTIEGYMENPFTSIPHCVEHPIAHTHVEHPLLLL 100

[Close]

BLAST of Chy12G211210 vs. ExPASy TrEMBL
Match: A0A5D3CK53 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00740 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 9.7e-06
Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0


Query: 1  ALIKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYAL 45
          A I+EIDP DDE AYLD+S+EI T +GY+E PPA  SH+VE +L
Sbjct: 26 ARIQEIDPTDDEHAYLDQSVEIPTTEGYVEDPPAPISHHVERSL 69

[Close]

BLAST of Chy12G211210 vs. ExPASy TrEMBL
Match: A0A5A7TM91 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G00180 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 9.7e-06
Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0


Query: 1  ALIKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYAL 45
          A I+EIDP DDE AYLD+S+EI T +GY+E PPA  SH+VE +L
Sbjct: 26 ARIQEIDPTDDEHAYLDQSVEIPTTEGYVEDPPAPISHHVERSL 69

[Close]

BLAST of Chy12G211210 vs. ExPASy TrEMBL
Match: A0A5D3E6H1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold172G00680 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.4e-04
Identity = 27/50 (54.00%), Postives = 33/50 (66.00%), Query Frame = 0


Query: 3  IKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYALACTYVDLP 53
          +K IDP +DERAY+ RS EI   KGY EGP  L  H+VE+A    +VD P
Sbjct: 37 LKRIDPKNDERAYVYRSFEIPKTKGYEEGPHDLAPHHVEHAPTRIHVDHP 86

[Close]

BLAST of Chy12G211210 vs. NCBI nr
Match: KAE8653658.1 (hypothetical protein Csa_023635, partial [Cucumis sativus])

HSP 1 Score: 95.5 bits (236), Expect = 1.42e-21
Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 1  ALIKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYALACTYVDLPLLLLNYHS 60
          ALIKEIDP  DE AYLDRSLEIS A+ Y+EGPPALTSHYV+YALA TYVDLPLLLL +  
Sbjct: 1  ALIKEIDPTYDEHAYLDRSLEISRAESYVEGPPALTSHYVKYALAYTYVDLPLLLLMFTI 60

Query: 61 SSRDN--NE*VLRLKCSHPLQLS 81
             +   NE + R++ S   +LS
Sbjct: 61 FLLETTMNEFLDRMQSSFTAKLS 83

[Close]

BLAST of Chy12G211210 vs. NCBI nr
Match: KAA0043285.1 (hypothetical protein E6C27_scaffold110G001770 [Cucumis melo var. makuwa] >TYK29349.1 hypothetical protein E5676_scaffold129G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 5.01e-08
Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 0


Query: 1   ALIKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYALACTYVDLPLLLL 56
           A I+EID MDDE AYLD S+EI T +GYME P     H VE+ +A T+V+ PLLLL
Sbjct: 45  ARIEEIDLMDDEHAYLDWSIEIPTIEGYMENPFTSIPHCVEHPIAHTHVEHPLLLL 100

[Close]

BLAST of Chy12G211210 vs. NCBI nr
Match: KAA0043156.1 (hypothetical protein E6C27_scaffold110G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 59.3 bits (142), Expect = 2.27e-07
Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0


Query: 1  ALIKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYAL 44
          A I+EIDP DDE AYLD+S+EI T +GY+E PPA  SH+VE +L
Sbjct: 26 ARIQEIDPTDDEHAYLDQSVEIPTTEGYVEDPPAPISHHVERSL 69

[Close]

BLAST of Chy12G211210 vs. NCBI nr
Match: TYK12307.1 (hypothetical protein E5676_scaffold302G00740 [Cucumis melo var. makuwa])

HSP 1 Score: 59.3 bits (142), Expect = 3.27e-07
Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0


Query: 1  ALIKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYAL 44
          A I+EIDP DDE AYLD+S+EI T +GY+E PPA  SH+VE +L
Sbjct: 26 ARIQEIDPTDDEHAYLDQSVEIPTTEGYVEDPPAPISHHVERSL 69

[Close]

BLAST of Chy12G211210 vs. NCBI nr
Match: KAA0048759.1 (hypothetical protein E6C27_scaffold43G00670 [Cucumis melo var. makuwa] >TYK31574.1 hypothetical protein E5676_scaffold172G00680 [Cucumis melo var. makuwa])

HSP 1 Score: 58.2 bits (139), Expect = 1.07e-06
Identity = 41/112 (36.61%), Postives = 59/112 (52.68%), Query Frame = 0


Query: 3   IKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYALACTYVDLPL--LLLNYHS 62
           +K IDP +DERAY+ RS EI   KGY EGP  L  H+VE+A    +VD P     + +  
Sbjct: 37  LKRIDPKNDERAYVYRSFEIPKTKGYEEGPHDLAPHHVEHAPTRIHVDHPPDPPHIKHLP 96

Query: 63  SSRDNNE*VL----RLKCSHPLQLSYRP*MSF*WS*LRTRRLTPNNTMVVVK 108
           +   ++  +L    ++     ++    P  S  W+    RRLTPNN M +VK
Sbjct: 97  TPVVSSSLILLFGTKVAPIASIEQPTEPNRS--WA--MVRRLTPNNVMTMVK 144

The following BLAST results are available for this feature:

BLAST of Chy12G211210 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G211210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M3R6	4.6e-16	81.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701370 PE=4 SV=1	[more]
A0A5D3E0W4	1.1e-06	58.93	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CK53	9.7e-06	63.64	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7TM91	9.7e-06	63.64	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5D3E6H1	2.4e-04	54.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Chy12G211210 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653658.1	1.42e-21	63.86	hypothetical protein Csa_023635, partial [Cucumis sativus]	[more]
KAA0043285.1	5.01e-08	58.93	hypothetical protein E6C27_scaffold110G001770 [Cucumis melo var. makuwa] >TYK293...	[more]
KAA0043156.1	2.27e-07	63.64	hypothetical protein E6C27_scaffold110G00180 [Cucumis melo var. makuwa]	[more]
TYK12307.1	3.27e-07	63.64	hypothetical protein E5676_scaffold302G00740 [Cucumis melo var. makuwa]	[more]
KAA0048759.1	1.07e-06	36.61	hypothetical protein E6C27_scaffold43G00670 [Cucumis melo var. makuwa] >TYK31574...	[more]

BLAST of Chy12G211210 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G211210.1	Chy12G211210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity