Chy7G137220 (gene) Cucumber (hystrix) v1

Overview


Name	Chy7G137220
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Increased DNA methylation 1-like
Location	chrH07: 12491450 .. 12491641 (-)
RNA-Seq Expression	Chy7G137220
Synteny	Chy7G137220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTCAACGATGACGACGACGATTATTCACCTACCACGACTAAGTCCAGAAAAGCTCGGGAGTTCACTGTGAAGGATGTGCCTCAGGCAGTAGTGGAATGGTACATGATTGCTCATAACAAGAAAGCTGCTCTCAAGAAATCCACAGACAAAGAGCTTGCATTAGGGCATTTATTGGCTATGGGATGA

mRNA sequence

ATGGATGTCAACGATGACGACGACGATTATTCACCTACCACGACTAAGTCCAGAAAAGCTCGGGAGTTCACTGTGAAGGATGTGCCTCAGGCAGTAGTGGAATGGTACATGATTGCTCATAACAAGAAAGCTGCTCTCAAGAAATCCACAGACAAAGAGCTTGCATTAGGGCATTTATTGGCTATGGGATGA

Coding sequence (CDS)

ATGGATGTCAACGATGACGACGACGATTATTCACCTACCACGACTAAGTCCAGAAAAGCTCGGGAGTTCACTGTGAAGGATGTGCCTCAGGCAGTAGTGGAATGGTACATGATTGCTCATAACAAGAAAGCTGCTCTCAAGAAATCCACAGACAAAGAGCTTGCATTAGGGCATTTATTGGCTATGGGATGA

Protein sequence

MDVNDDDDDYSPTTTKSRKAREFTVKDVPQAVVEWYMIAHNKKAALKKSTDKELALGHLLAMG*

Homology

[Close]

BLAST of Chy7G137220 vs. ExPASy TrEMBL
Match: A0A0A0KDZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G113590 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 7.4e-21
Identity = 57/64 (89.06%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1  MDVN-DDDDDYSPTTTKSRKAREFTVKDVPQAVVEWYMIAHNKKAALKKSTDKELALGHL 60
          MDVN DDD+DYSPTTTKSRKAREF VKD PQAVVEWYMIA NKKAA KKST KELALGHL
Sbjct: 23 MDVNYDDDNDYSPTTTKSRKAREFIVKDAPQAVVEWYMIALNKKAAFKKSTIKELALGHL 82

Query: 61 LAMG 64
          LAMG
Sbjct: 83 LAMG 86

[Close]

BLAST of Chy7G137220 vs. ExPASy TrEMBL
Match: A0A0A0L0H9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642540 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-19
Identity = 54/64 (84.38%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1  MDV-NDDDDDYSPTTTKSRKAREFTVKDVPQAVVEWYMIAHNKKAALKKSTDKELALGHL 60
          MD+ +DDDDDYSPTTT+SRKAREFTVKD PQAVVEWY IA +KKAALKKS  KELALGHL
Sbjct: 23 MDISDDDDDDYSPTTTRSRKAREFTVKDAPQAVVEWYTIALDKKAALKKSAVKELALGHL 82

Query: 61 LAMG 64
          LAMG
Sbjct: 83 LAMG 86

[Close]

BLAST of Chy7G137220 vs. ExPASy TrEMBL
Match: A0A5D3D9F4 (Increased DNA methylation 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002700 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.1e-16
Identity = 49/64 (76.56%), Postives = 54/64 (84.38%), Query Frame = 0


Query: 1  MDVND-DDDDYSPTTTKSRKAREFTVKDVPQAVVEWYMIAHNKKAALKKSTDKELALGHL 60
          MD++D DDDDY PT TK RKAREF VKD PQAVVEWYMI+ +KKAA+KKS  KE ALGHL
Sbjct: 10 MDISDEDDDDYPPTITKPRKAREFIVKDAPQAVVEWYMISLDKKAAIKKSEVKEHALGHL 69

Query: 61 LAMG 64
          LAMG
Sbjct: 70 LAMG 73

[Close]

BLAST of Chy7G137220 vs. ExPASy TrEMBL
Match: A0A5D3D9B2 (Increased DNA methylation 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002690 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.8e-14
Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 0


Query: 1  MDVNDDDDDYSPTTTKSRKAREFTVKDVPQAVVEWYMIAHNKKAALKKSTDKELALGHLL 60
          MD++  DDDY P+    RKAREFTV D PQAVV+WYMIA +KKAA+KKST K+LALGHLL
Sbjct: 1  MDIH--DDDYHPSINTKRKAREFTVMDAPQAVVDWYMIALDKKAAIKKSTVKDLALGHLL 60

Query: 61 AMG 64
            G
Sbjct: 61 KTG 61

[Close]

BLAST of Chy7G137220 vs. ExPASy TrEMBL
Match: A0A1S3BVB1 (increased DNA methylation 1-like OS=Cucumis melo OX=3656 GN=LOC103493895 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.8e-14
Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 0


Query: 1  MDVNDDDDDYSPTTTKSRKAREFTVKDVPQAVVEWYMIAHNKKAALKKSTDKELALGHLL 60
          MD++  DDDY P+    RKAREFTV D PQAVV+WYMIA +KKAA+KKST K+LALGHLL
Sbjct: 16 MDIH--DDDYHPSINTKRKAREFTVMDAPQAVVDWYMIALDKKAAIKKSTVKDLALGHLL 75

Query: 61 AMG 64
            G
Sbjct: 76 KTG 76

[Close]

BLAST of Chy7G137220 vs. NCBI nr
Match: KAE8649882.1 (hypothetical protein Csa_012019 [Cucumis sativus])

HSP 1 Score: 105 bits (261), Expect = 2.33e-24
Identity = 54/64 (84.38%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1  MDVNDDDDD-YSPTTTKSRKAREFTVKDVPQAVVEWYMIAHNKKAALKKSTDKELALGHL 60
          MD++DDDDD YSPTTT+SRKAREFTVKD PQAVVEWY IA +KKAALKKS  KELALGHL
Sbjct: 1  MDISDDDDDDYSPTTTRSRKAREFTVKDAPQAVVEWYTIALDKKAALKKSAVKELALGHL 60

Query: 61 LAMG 63
          LAMG
Sbjct: 61 LAMG 64

[Close]

BLAST of Chy7G137220 vs. NCBI nr
Match: XP_004141405.3 (increased DNA methylation 1 [Cucumis sativus])

HSP 1 Score: 105 bits (261), Expect = 2.34e-24
Identity = 54/64 (84.38%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1  MDVNDDDDD-YSPTTTKSRKAREFTVKDVPQAVVEWYMIAHNKKAALKKSTDKELALGHL 60
          MD++DDDDD YSPTTT+SRKAREFTVKD PQAVVEWY IA +KKAALKKS  KELALGHL
Sbjct: 28 MDISDDDDDDYSPTTTRSRKAREFTVKDAPQAVVEWYTIALDKKAALKKSAVKELALGHL 87

Query: 61 LAMG 63
          LAMG
Sbjct: 88 LAMG 91

[Close]

BLAST of Chy7G137220 vs. NCBI nr
Match: KAA0064445.1 (increased DNA methylation 1-like [Cucumis melo var. makuwa] >TYK20144.1 increased DNA methylation 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 7.72e-21
Identity = 49/64 (76.56%), Postives = 54/64 (84.38%), Query Frame = 0


Query: 1  MDVND-DDDDYSPTTTKSRKAREFTVKDVPQAVVEWYMIAHNKKAALKKSTDKELALGHL 60
          MD++D DDDDY PT TK RKAREF VKD PQAVVEWYMI+ +KKAA+KKS  KE ALGHL
Sbjct: 10 MDISDEDDDDYPPTITKPRKAREFIVKDAPQAVVEWYMISLDKKAAIKKSEVKEHALGHL 69

Query: 61 LAMG 63
          LAMG
Sbjct: 70 LAMG 73

[Close]

BLAST of Chy7G137220 vs. NCBI nr
Match: KAA0064446.1 (increased DNA methylation 1-like [Cucumis melo var. makuwa] >TYK20143.1 increased DNA methylation 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 1.86e-17
Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 0


Query: 1  MDVNDDDDDYSPTTTKSRKAREFTVKDVPQAVVEWYMIAHNKKAALKKSTDKELALGHLL 60
          MD++DD  DY P+    RKAREFTV D PQAVV+WYMIA +KKAA+KKST K+LALGHLL
Sbjct: 1  MDIHDD--DYHPSINTKRKAREFTVMDAPQAVVDWYMIALDKKAAIKKSTVKDLALGHLL 60

Query: 61 AMG 63
            G
Sbjct: 61 KTG 61

[Close]

BLAST of Chy7G137220 vs. NCBI nr
Match: XP_008453071.1 (PREDICTED: increased DNA methylation 1-like [Cucumis melo])

HSP 1 Score: 85.5 bits (210), Expect = 1.86e-17
Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 0


Query: 1  MDVNDDDDDYSPTTTKSRKAREFTVKDVPQAVVEWYMIAHNKKAALKKSTDKELALGHLL 60
          MD++DD  DY P+    RKAREFTV D PQAVV+WYMIA +KKAA+KKST K+LALGHLL
Sbjct: 16 MDIHDD--DYHPSINTKRKAREFTVMDAPQAVVDWYMIALDKKAAIKKSTVKDLALGHLL 75

Query: 61 AMG 63
            G
Sbjct: 76 KTG 76

The following BLAST results are available for this feature:

BLAST of Chy7G137220 vs.


Match Name	E-value	Identity	Description

BLAST of Chy7G137220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDZ5	7.4e-21	89.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G113590 PE=4 SV=1	[more]
A0A0A0L0H9	1.1e-19	84.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642540 PE=4 SV=1	[more]
A0A5D3D9F4	1.1e-16	76.56	Increased DNA methylation 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A5D3D9B2	8.8e-14	68.25	Increased DNA methylation 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BVB1	8.8e-14	68.25	increased DNA methylation 1-like OS=Cucumis melo OX=3656 GN=LOC103493895 PE=4 SV...	[more]

BLAST of Chy7G137220 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649882.1	2.33e-24	84.38	hypothetical protein Csa_012019 [Cucumis sativus]	[more]
XP_004141405.3	2.34e-24	84.38	increased DNA methylation 1 [Cucumis sativus]	[more]
KAA0064445.1	7.72e-21	76.56	increased DNA methylation 1-like [Cucumis melo var. makuwa] >TYK20144.1 increase...	[more]
KAA0064446.1	1.86e-17	68.25	increased DNA methylation 1-like [Cucumis melo var. makuwa] >TYK20143.1 increase...	[more]
XP_008453071.1	1.86e-17	68.25	PREDICTED: increased DNA methylation 1-like [Cucumis melo]	[more]

BLAST of Chy7G137220 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy7G137220.1	Chy7G137220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008080	N-acetyltransferase activity