Chy4G068670 (gene) Cucumber (hystrix) v1

Overview
NameChy4G068670
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionTransducin/WD40 repeat-like superfamily protein
LocationchrH04: 1333163 .. 1335392 (-)
RNA-Seq ExpressionChy4G068670
SyntenyChy4G068670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCATGGGCAGTCTCCAGTACCGCAACAAGTCGTGTAATTTAGTGAGCTTAAAGGTTGAAGATGAGAAGAAAACTGATTACGAGTCCCAACAACAACAACAAGTTTGGTCAGATGAAAGAACAGTACTTAAGGGAATGAAGAAAAATAATAATAATAATTTGAATAATGATCACTGCATAGCATCGGTCCATGGTGGGGAAGGGAATATATATTCAATTGCTATTTCTTCTAAAGGACTCGTTTTTACTGCCTCTCACGATGGCGATATATGCCGTATTCGTGCCTGGAAACCGCCTGACTGTATGAACGCTGCCCACTTCAAGCTCTCCGCCGCCGCCGGACTCAACGCCATTGCTACTTCTGGTATATATCATTGTTATTTTCTTAACATTGAGTTTATTTCTTATCAGCTTTTATATAAAATAAAACTAAGTTTATAATTCTTTTGAAATAGATAACAAAATAATTTTTTTTTTAGCTTTAATAATATAATATAGTATGTTTTGTTTAAAAAATATTTATATTCTTTTCAAAATTTACTATTGAAATAAAAAATATAATTTTTTTAATTTCATAAAAAAATTGAGACTTGAGGTAAATATATATGGAAGGATTAATTGTTTTTATAGTTTTGTTTAATAATCCATTCTTTTTTAGTTTTCTGTTTTTGAAATTTATATTTGTTTTTTTTTCTCAATTTCTTTACTATAATTTTCAACATTTGTATACAAATATTTTGTATTCTTATTCAAATAATGTAAAGAAAACTAAGTTTTTAAATTACTTTTTTTACCTTTCAAATTTTTGTTTAATTTTTTAAAAACATTTGGATAGAAAAAGGTACAAAAAGAAATAAAAAGAAATAAAATAAAGAAAGGAAAATGGTGGAAAATAGCAAATTTGACAAAATATTTACAACATAGAACAAAATTTCAGATTCTTATTGATAGACGATAATAGAAGCTAATTAGTGATACATGATAGACAATGATAGAAGTTTATCAGTTTTTATCATTGATAGAATCTAAAATTTTACTGTAGCATATAAATATTTGAATTTATTTTACTATTTTTAAAAATATGTCGTTTAATTATTTTTTTACCTTTCAAATTTTTGTATAATTTTTTTAAAAACATTTGGATAGAAAAAGGGACAGCAAAACAAAATAAAGAAATTTATGGCTTAGAAGTAATTTTATAGAATTGAGTTATAAAAATTAGAGACAATAAAAAAAAATAAAAATAGAGACAATATGTATTTTTGTAAACAATTTAATTACTTTTCATATGTTACCATATAATTTTAAATTCTAGTTGAAAGATGTAAAATTAATAACATAAAGTTGATATGTATATCAGGAAACATGTTGTTCACATCACATAGAGATCTAAGAATCCGAATATGGAATTTCACAATTTCTGAAAAGTTCATTTGGAAAAAGACTTGTTCAGTTCCAAAGAAAACATCTTTGTTGTTATCATTATCGAAAACCAAAACAGATAGCAGCAGACGCCACAAACACAAAGACACCATTTCTTGCATTGCTTATTACCATTCACAGCACATTCTCCACACCGCTTCTCATGACAAAACCATCAAAGTTTGGAAAATCTCTGACCGTGTATGCATTGACTCCTCCATCCCACACGAACTCAAAGTCAGCTCCTTAACCATCAACCAAAACGATGGTTCACTCTTCACCTGTTCCTCAGATGCAACTGTCAAGATTTGGCGAAGACTATTCCCTCAAAACTCCCATACTCTTACAATGACACTCAAGTTCCAAACTTCCCCTGTTAACGCTGTGGTTTTAAGCACCTACCGTGACGCTCCCACTTTCCTCTATTCCGGATCCTCTGAGTGGCACTGAGGACACCACCGTCAGGATTTGGAGGAGGGAGGAAGGAGGTTGGTCTCATGAATGCTTGGCAGTGTTGGATGGCCATAGAGGGCCTGTCAGATGCTTAGCAGGGACCTTGAAAACCCTGGAAAACAGAGTAATGAACAAGATGGAGACGAGTGTTTTGGTTTATAGTGGGAGTTTGAACCAGACGTTTAAGGTTTGGCGAGTGAAGGTTTTTTTGAACCATAATGATCAAGACAAGAAGGGATTAATGGAGTATGAGGGGGAGGAGGAGGACTTGAAGATGAAGAAGCTCAATGAAACGAGCCCTGTCTTGTCTCCTTCTTGGGTTCAGAAAAAGCTTCAACATAATTATTTCTGA

mRNA sequence

ATGGGCATGGGCAGTCTCCAGTACCGCAACAAGTCGTGTAATTTAGTGAGCTTAAAGGTTGAAGATGAGAAGAAAACTGATTACGAGTCCCAACAACAACAACAAGTTTGGTCAGATGAAAGAACAGTACTTAAGGGAATGAAGAAAAATAATAATAATAATTTGAATAATGATCACTGCATAGCATCGGTCCATGGTGGGGAAGGGAATATATATTCAATTGCTATTTCTTCTAAAGGACTCGTTTTTACTGCCTCTCACGATGGCGATATATGCCGTATTCGTGCCTGGAAACCGCCTGACTGTATGAACGCTGCCCACTTCAAGCTCTCCGCCGCCGCCGGACTCAACGCCATTGCTACTTCTGCACCTACCGTGACGCTCCCACTTTCCTCTATTCCGGATCCTCTGAGTGGCACTGAGGACACCACCGTCAGGATTTGGAGGAGGGAGGAAGGAGGTTGGTCTCATGAATGCTTGGCAGTGTTGGATGGCCATAGAGGGCCTGTCAGATGCTTAGCAGGGACCTTGAAAACCCTGGAAAACAGAGTAATGAACAAGATGGAGACGAGTGTTTTGGTTTATAGTGGGAGTTTGAACCAGACGTTTAAGGTTTGGCGAGTGAAGGTTTTTTTGAACCATAATGATCAAGACAAGAAGGGATTAATGGAGTATGAGGGGGAGGAGGAGGACTTGAAGATGAAGAAGCTCAATGAAACGAGCCCTGTCTTGTCTCCTTCTTGGGTTCAGAAAAAGCTTCAACATAATTATTTCTGA

Coding sequence (CDS)

ATGGGCATGGGCAGTCTCCAGTACCGCAACAAGTCGTGTAATTTAGTGAGCTTAAAGGTTGAAGATGAGAAGAAAACTGATTACGAGTCCCAACAACAACAACAAGTTTGGTCAGATGAAAGAACAGTACTTAAGGGAATGAAGAAAAATAATAATAATAATTTGAATAATGATCACTGCATAGCATCGGTCCATGGTGGGGAAGGGAATATATATTCAATTGCTATTTCTTCTAAAGGACTCGTTTTTACTGCCTCTCACGATGGCGATATATGCCGTATTCGTGCCTGGAAACCGCCTGACTGTATGAACGCTGCCCACTTCAAGCTCTCCGCCGCCGCCGGACTCAACGCCATTGCTACTTCTGCACCTACCGTGACGCTCCCACTTTCCTCTATTCCGGATCCTCTGAGTGGCACTGAGGACACCACCGTCAGGATTTGGAGGAGGGAGGAAGGAGGTTGGTCTCATGAATGCTTGGCAGTGTTGGATGGCCATAGAGGGCCTGTCAGATGCTTAGCAGGGACCTTGAAAACCCTGGAAAACAGAGTAATGAACAAGATGGAGACGAGTGTTTTGGTTTATAGTGGGAGTTTGAACCAGACGTTTAAGGTTTGGCGAGTGAAGGTTTTTTTGAACCATAATGATCAAGACAAGAAGGGATTAATGGAGTATGAGGGGGAGGAGGAGGACTTGAAGATGAAGAAGCTCAATGAAACGAGCCCTGTCTTGTCTCCTTCTTGGGTTCAGAAAAAGCTTCAACATAATTATTTCTGA

Protein sequence

MGMGSLQYRNKSCNLVSLKVEDEKKTDYESQQQQQVWSDERTVLKGMKKNNNNNLNNDHCIASVHGGEGNIYSIAISSKGLVFTASHDGDICRIRAWKPPDCMNAAHFKLSAAAGLNAIATSAPTVTLPLSSIPDPLSGTEDTTVRIWRREEGGWSHECLAVLDGHRGPVRCLAGTLKTLENRVMNKMETSVLVYSGSLNQTFKVWRVKVFLNHNDQDKKGLMEYEGEEEDLKMKKLNETSPVLSPSWVQKKLQHNYF*
Homology
BLAST of Chy4G068670 vs. ExPASy Swiss-Prot
Match: O48716 (Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.4e-06
Identity = 51/217 (23.50%), Postives = 94/217 (43.32%), Query Frame = 0

Query: 15  LVSLKVEDEKKTDYESQQQQQVWSDERT-VLKGMKKNNNNNLNNDHCIASVHGGEGNIYS 74
           L S+   D+      S  +  V+S      +K  K++          + ++   E  + +
Sbjct: 241 LESIPAHDDAVNSVVSTTEAIVFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTA 300

Query: 75  IAISSKG-LVFTASHDGDICRIRAWKPPDCMNAAHFKLSAAAGLNAIATSAPTVTLPLSS 134
           +A+S  G  V+  S DG    +  W+    +N           +  +  +   V      
Sbjct: 301 LAVSKNGAAVYFGSSDG---LVNFWEREKQLNYGGILKGHKLAVLCLEVAGSLV------ 360

Query: 135 IPDPLSGTEDTTVRIWRREEGGWSHECLAVLDGHRGPVRCLAGTLKTLENRVMNKMETSV 194
                SG+ D T+ +W+R+  G  H CL+VL GH GPV+CLA      +     + +   
Sbjct: 361 ----FSGSADKTICVWKRD--GNIHTCLSVLTGHTGPVKCLA---VEADREASERRDKKW 420

Query: 195 LVYSGSLNQTFKVWRVKVFLNHNDQDKKGLMEYEGEE 230
           +VYSGSL+++ KVW V    +  D ++  +M+ + ++
Sbjct: 421 IVYSGSLDKSVKVWGVSE--SFIDMNQMSMMQQQQQQ 437

BLAST of Chy4G068670 vs. ExPASy TrEMBL
Match: A0A1S3CRS7 (F-box/WD repeat-containing protein sel-10-like OS=Cucumis melo OX=3656 GN=LOC103504006 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 4.2e-54
Identity = 108/124 (87.10%), Postives = 115/124 (92.74%), Query Frame = 0

Query: 137 LSGTEDTTVRIWRREEGGWSHECLAVLDGHRGPVRCLAGTLKTLENRVMNKMETSVLVYS 196
           LSG+EDTT+RIWRREE GWSHECLAVLD HRGPVRCLAGTL+T+ENRVMNKMETSVLVYS
Sbjct: 23  LSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYS 82

Query: 197 GSLNQTFKVWRVKVFLNHNDQDKKGLMEYEGE--EEDLKMKKLNETSPVLSPSWVQKKLQ 256
           GSL+QTFKVW VKVFLNHN+QDKK LMEY+ E  EEDLKMKKL ETSPVLSPSWVQKKLQ
Sbjct: 83  GSLDQTFKVWGVKVFLNHNNQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQ 142

Query: 257 HNYF 259
            NYF
Sbjct: 143 PNYF 146

BLAST of Chy4G068670 vs. ExPASy TrEMBL
Match: A0A5A7TAM5 (F-box/WD repeat-containing protein sel-10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005020 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 5.8e-40
Identity = 88/122 (72.13%), Postives = 93/122 (76.23%), Query Frame = 0

Query: 137 LSGTEDTTVRIWRREEGGWSHECLAVLDGHRGPVRCLAGTLKTLENRVMNKMETSVLVYS 196
           LSG+EDTT+RIWRREE GWSHECLAVLD HRGPVRCLAGTL+T+ENRVMNKMETSVLVYS
Sbjct: 23  LSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYS 82

Query: 197 GSLNQTFKVWRVKVFLNHNDQDKKGLMEYEGEEEDLKMKKLNETSPVLSPSWVQKKLQHN 256
           GSL+QTFKVW V                        KMKKL ETSPVLSPSWVQKKLQ N
Sbjct: 83  GSLDQTFKVWGV------------------------KMKKLYETSPVLSPSWVQKKLQPN 120

Query: 257 YF 259
           YF
Sbjct: 143 YF 120

BLAST of Chy4G068670 vs. ExPASy TrEMBL
Match: A0A6J1FS64 (protein JINGUBANG-like OS=Cucurbita moschata OX=3662 GN=LOC111446752 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.3e-31
Identity = 78/118 (66.10%), Postives = 87/118 (73.73%), Query Frame = 0

Query: 137 LSGTEDTTVRIWRREEGGWSHECLAVLDGHRGPVRCLAGTLKTLENRVMNKMETSVLVYS 196
           LSG+EDTTVRIWR+EEGG  HECLAVLDGHRGPVRCLAG+L+      M+ M+ S LVYS
Sbjct: 200 LSGSEDTTVRIWRKEEGGCYHECLAVLDGHRGPVRCLAGSLE------MDNMDMSFLVYS 259

Query: 197 GSLNQTFKVWRVKVFLNHNDQDKKGLMEYEGEEEDLKMKKLNETSPVLSPSWVQKKLQ 255
           GSL+Q+FKVWRVKV           L E E    DLKM KL E SPVLSPSWV+KKLQ
Sbjct: 260 GSLDQSFKVWRVKVM----------LAEEENNGGDLKMNKLYEMSPVLSPSWVEKKLQ 301

BLAST of Chy4G068670 vs. ExPASy TrEMBL
Match: A0A6J1IXB8 (protein JINGUBANG-like OS=Cucurbita maxima OX=3661 GN=LOC111480780 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.7e-31
Identity = 78/118 (66.10%), Postives = 86/118 (72.88%), Query Frame = 0

Query: 137 LSGTEDTTVRIWRREEGGWSHECLAVLDGHRGPVRCLAGTLKTLENRVMNKMETSVLVYS 196
           LSG+EDTTVRIWR+EEGG  HECLAVLDGHRGPVRCLAG+L+      M  M+ S LVYS
Sbjct: 200 LSGSEDTTVRIWRKEEGGCYHECLAVLDGHRGPVRCLAGSLE------MENMDMSFLVYS 259

Query: 197 GSLNQTFKVWRVKVFLNHNDQDKKGLMEYEGEEEDLKMKKLNETSPVLSPSWVQKKLQ 255
           GSL+Q+FKVWRVKV           L E E    DLKM KL E SPVLSPSWV+KKLQ
Sbjct: 260 GSLDQSFKVWRVKVM----------LAEEENNGGDLKMNKLYEMSPVLSPSWVEKKLQ 301

BLAST of Chy4G068670 vs. ExPASy TrEMBL
Match: A0A6J1CLK4 (protein JINGUBANG-like OS=Momordica charantia OX=3673 GN=LOC111012075 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.6e-29
Identity = 73/128 (57.03%), Postives = 88/128 (68.75%), Query Frame = 0

Query: 137 LSGTEDTTVRIWRREEGGWSHECLAVLDGHRGPVRCLAGTLKTLENRVMNKMETSVLVYS 196
           LSG+EDTTVRIWR++EGG+ HEC+ VL+GHRGPVRCLA T++      M  + +S LVYS
Sbjct: 199 LSGSEDTTVRIWRKQEGGYCHECVVVLEGHRGPVRCLAATVE------MENIVSSFLVYS 258

Query: 197 GSLNQTFKVWRVKVFLNHNDQDKKGLMEY------EGEEEDLKMKKLNETSPVLSPSWVQ 256
           GSL+QTFKVWRVKV L   D   K  ++Y       G+     +  L   SPVLSPSWVQ
Sbjct: 259 GSLDQTFKVWRVKVVLGLGDDKNKMWLDYGEGGAPPGDSIYNSLGDLYHMSPVLSPSWVQ 318

Query: 257 KKLQHNYF 259
           KKLQ NYF
Sbjct: 319 KKLQANYF 320

BLAST of Chy4G068670 vs. NCBI nr
Match: XP_008466650.1 (PREDICTED: F-box/WD repeat-containing protein sel-10-like [Cucumis melo])

HSP 1 Score: 219 bits (557), Expect = 9.75e-69
Identity = 108/124 (87.10%), Postives = 115/124 (92.74%), Query Frame = 0

Query: 137 LSGTEDTTVRIWRREEGGWSHECLAVLDGHRGPVRCLAGTLKTLENRVMNKMETSVLVYS 196
           LSG+EDTT+RIWRREE GWSHECLAVLD HRGPVRCLAGTL+T+ENRVMNKMETSVLVYS
Sbjct: 23  LSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYS 82

Query: 197 GSLNQTFKVWRVKVFLNHNDQDKKGLMEYEGEE--EDLKMKKLNETSPVLSPSWVQKKLQ 256
           GSL+QTFKVW VKVFLNHN+QDKK LMEY+ EE  EDLKMKKL ETSPVLSPSWVQKKLQ
Sbjct: 83  GSLDQTFKVWGVKVFLNHNNQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQ 142

Query: 257 HNYF 258
            NYF
Sbjct: 143 PNYF 146

BLAST of Chy4G068670 vs. NCBI nr
Match: XP_038897273.1 (protein JINGUBANG-like [Benincasa hispida])

HSP 1 Score: 202 bits (514), Expect = 1.21e-59
Identity = 104/140 (74.29%), Postives = 114/140 (81.43%), Query Frame = 0

Query: 137 LSGTEDTTVRIWRREEGGWSHECLAVLDGHRGPVRCLAGTLKT----------------L 196
           +SG+EDTTVRIWRREEGGWSHECLAVLDGHRGPVRCLAGTL+T                +
Sbjct: 200 MSGSEDTTVRIWRREEGGWSHECLAVLDGHRGPVRCLAGTLETVQNRVMNKMETMENRVM 259

Query: 197 ENRVMNKMETSVLVYSGSLNQTFKVWRVKVFLNHNDQDKKGLMEYEGEEED--LKMKKLN 256
           ENR+MNKMET+VLVYSGSL+QTFKVWRVKV+L HNDQ +K L+EYE EEED  LKMKKL 
Sbjct: 260 ENRLMNKMETNVLVYSGSLDQTFKVWRVKVYLGHNDQYQKELLEYEEEEEDENLKMKKLY 319

Query: 257 ETSPVLSPSWVQKKLQHNYF 258
           E SPVLSPSWVQKKLQ  YF
Sbjct: 320 EMSPVLSPSWVQKKLQPKYF 339

BLAST of Chy4G068670 vs. NCBI nr
Match: KAA0038617.1 (F-box/WD repeat-containing protein sel-10-like [Cucumis melo var. makuwa] >TYK31216.1 F-box/WD repeat-containing protein sel-10-like [Cucumis melo var. makuwa])

HSP 1 Score: 173 bits (439), Expect = 3.16e-51
Identity = 88/122 (72.13%), Postives = 93/122 (76.23%), Query Frame = 0

Query: 137 LSGTEDTTVRIWRREEGGWSHECLAVLDGHRGPVRCLAGTLKTLENRVMNKMETSVLVYS 196
           LSG+EDTT+RIWRREE GWSHECLAVLD HRGPVRCLAGTL+T+ENRVMNKMETSVLVYS
Sbjct: 23  LSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYS 82

Query: 197 GSLNQTFKVWRVKVFLNHNDQDKKGLMEYEGEEEDLKMKKLNETSPVLSPSWVQKKLQHN 256
           GSL+QTFKVW VK                        MKKL ETSPVLSPSWVQKKLQ N
Sbjct: 83  GSLDQTFKVWGVK------------------------MKKLYETSPVLSPSWVQKKLQPN 120

Query: 257 YF 258
           YF
Sbjct: 143 YF 120

BLAST of Chy4G068670 vs. NCBI nr
Match: XP_021646534.1 (protein JINGUBANG-like isoform X3 [Hevea brasiliensis])

HSP 1 Score: 154 bits (389), Expect = 1.88e-41
Identity = 98/227 (43.17%), Postives = 130/227 (57.27%), Query Frame = 0

Query: 59  HCIASVHGGEGNIYSIAISSKGLVFTASHDGDICRIRAWKPPDCMNAAHFKLSAAA--GL 118
           HCIAS+H  EGNI+SIA+S KG+VFT S      RIRAW+ PDC+   + K S+     +
Sbjct: 85  HCIASIHRNEGNIFSIAVS-KGVVFTGSESK---RIRAWRLPDCIERGYLKASSGEVRAI 144

Query: 119 NAIATSAPTVT------------------------LPLSSIPDPL-SGTEDTTVRIWRRE 178
            A  +S  T+                         L L ++   + SG+EDTT+R+WRRE
Sbjct: 145 LAHGSSDGTINFWEKEKFSGRFNHGGFLQGHRFSVLCLVAVEKLIFSGSEDTTIRVWRRE 204

Query: 179 EGGWSHECLAVLDGHRGPVRCLAGTLKTLENRVMNKMETSVLVYSGSLNQTFKVWRVKVF 238
           EG + HECLAVLDGHRGPVRCLA  ++      + K+    LVYS SL+ +FK+WRVKV 
Sbjct: 205 EGSYFHECLAVLDGHRGPVRCLAACME------LEKVVMGFLVYSASLDHSFKIWRVKVL 264

Query: 239 LNHNDQDKKGLMEYEGEEEDLKMKKLNETSPVLSPSWVQKKLQHNYF 258
                 ++K  M+Y  + E        E SPVLSPSWV++KL+ N F
Sbjct: 265 -----PEEKMCMDYTDQSESKARLMEYEMSPVLSPSWVERKLRVNPF 296

BLAST of Chy4G068670 vs. NCBI nr
Match: QHO16809.1 (uncharacterized protein DS421_10g306770 [Arachis hypogaea])

HSP 1 Score: 150 bits (380), Expect = 2.62e-39
Identity = 110/297 (37.04%), Postives = 138/297 (46.46%), Query Frame = 0

Query: 59  HCIASVHGGEGNIYSIAISSKGLVFTASHDGDICRIRAWKPPDCMNAAHFKLSAAAGLNA 118
           HCIAS+H  EGNIY+IA +SKGLVFT S+     RIR WK PDCM+  + K S+      
Sbjct: 94  HCIASLHRHEGNIYAIA-ASKGLVFTGSNSA---RIRVWKQPDCMDKGYLKASSGEVRAI 153

Query: 119 IATS--------------------------------APTVTLPLSSIPDPL--------- 178
           +A S                                + T+T+ L   P P+         
Sbjct: 154 LAYSNTLFSTHKDHKIRIWNFTVSDTFKSKKVYTEDSHTLTMTLKFQPSPVNALALSSSF 213

Query: 179 --------------------------------------------------SGTEDTTVRI 238
                                                             SG+EDTT+R+
Sbjct: 214 NHCFLYSGSSDGMINFWEKERLCYRFNHGGFLQGHRFAVLCLATVGNLVFSGSEDTTIRV 273

Query: 239 WRREEGGWSHECLAVLDGHRGPVRCLAGTLKTLENRVMNKMETSVLVYSGSLNQTFKVWR 258
           WRREEG   HECLAVLDGHRGPVRCLA  L+      M K+    LVYS SL+QTFKVWR
Sbjct: 274 WRREEGSCYHECLAVLDGHRGPVRCLAACLQ------MEKVVLGFLVYSASLDQTFKVWR 333

BLAST of Chy4G068670 vs. TAIR 10
Match: AT3G50390.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-12
Identity = 34/71 (47.89%), Postives = 46/71 (64.79%), Query Frame = 0

Query: 138 SGTEDTTVRIWRREEGGWSHECLAVLDGHRGPVRCLAGTLKTLENRVMNKMETSVLVYSG 197
           SG+ D  +R+WRR EGG  H CL+VL GH GPV+CLA       ++     E   +VYSG
Sbjct: 358 SGSADLGIRVWRRPEGGGEHVCLSVLTGHAGPVKCLA----VERDQESVSGERRWIVYSG 417

Query: 198 SLNQTFKVWRV 209
           SL+++ K+WRV
Sbjct: 418 SLDRSVKMWRV 424

BLAST of Chy4G068670 vs. TAIR 10
Match: AT4G34380.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 5.6e-11
Identity = 35/80 (43.75%), Postives = 50/80 (62.50%), Query Frame = 0

Query: 137 LSGTEDTTVRIWRREEGGWSHECLAVLDGHRGPVRCLAGTLKTLENRVMNK-METSV--- 196
           LSG+ D  + +WRR+    SH+CL+VL GH GPV+CLA      E R  ++  + SV   
Sbjct: 381 LSGSADKNICVWRRDPSDKSHQCLSVLTGHMGPVKCLA----VEEERACHQGAKASVAEG 440

Query: 197 ----LVYSGSLNQTFKVWRV 209
               ++YSGSL+++ KVWRV
Sbjct: 441 DRKWIIYSGSLDKSVKVWRV 456

BLAST of Chy4G068670 vs. TAIR 10
Match: AT3G18950.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.8e-09
Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 0

Query: 137 LSGTEDTTVRIWRREEGGWSHECLAVLDGHRGPVRCLAGTLKTLENRVMNKMETSVLVYS 196
           LSG  D  + +WRR  G  SH CL+VL  H GPV+CL       E     K +   +VYS
Sbjct: 395 LSGGADKNICVWRR-NGDGSHSCLSVLMDHVGPVKCLTAVEDDGEGH-REKGDQKWIVYS 454

Query: 197 GSLNQTFKVWRV 209
           GSL+++ KVWRV
Sbjct: 455 GSLDKSVKVWRV 464

BLAST of Chy4G068670 vs. TAIR 10
Match: AT1G49450.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 3.1e-09
Identity = 33/77 (42.86%), Postives = 44/77 (57.14%), Query Frame = 0

Query: 137 LSGTEDTTVRIWRREEGGWSHECLAVLDGHRGPVRCLAGTLKTLENR-----VMNKMETS 196
           LSG  D  + +W+R  G  SH CL+VL  H GPV+CLA   +  E+         K +  
Sbjct: 391 LSGGADKNICVWKR-NGDGSHTCLSVLMDHEGPVKCLAAVEEAEEDHNDGDDGGEKGDQR 450

Query: 197 VLVYSGSLNQTFKVWRV 209
            +VYSGSL+ + KVWRV
Sbjct: 451 WIVYSGSLDNSVKVWRV 466

BLAST of Chy4G068670 vs. TAIR 10
Match: AT1G47610.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 3.1e-09
Identity = 41/133 (30.83%), Postives = 66/133 (49.62%), Query Frame = 0

Query: 76  ISSKGLVFTASHDGDICRIRAWKPPDCMNAAHFKLSAAAGLNAIATSAPTVTLPLSSIPD 135
           ++S   V++ S DG    +  W+  D     H ++     L  +  +A    L       
Sbjct: 230 VTSHMAVYSGSSDG---AVNFWEMGDKKLLKHCEVFKKHRLAVLCIAAAGKLL------- 289

Query: 136 PLSGTEDTTVRIWRREEGGWSHECLAVLDGHRGPVRCLAGTLKTLENRVMNKMETSVLVY 195
             SG  D  + +WRRE  G  H C++VL GH GPV+CLA  ++       +  +  +++Y
Sbjct: 290 -FSGAADKKICVWRRE--GKVHTCVSVLTGHTGPVKCLA-VVEPSGGEEEDGGDGRLVLY 348

Query: 196 SGSLNQTFKVWRV 209
           SGSL+++ KVWRV
Sbjct: 350 SGSLDKSVKVWRV 348

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O487161.4e-0623.50Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A1S3CRS74.2e-5487.10F-box/WD repeat-containing protein sel-10-like OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A5A7TAM55.8e-4072.13F-box/WD repeat-containing protein sel-10-like OS=Cucumis melo var. makuwa OX=11... [more]
A0A6J1FS641.3e-3166.10protein JINGUBANG-like OS=Cucurbita moschata OX=3662 GN=LOC111446752 PE=4 SV=1[more]
A0A6J1IXB81.7e-3166.10protein JINGUBANG-like OS=Cucurbita maxima OX=3661 GN=LOC111480780 PE=4 SV=1[more]
A0A6J1CLK41.6e-2957.03protein JINGUBANG-like OS=Momordica charantia OX=3673 GN=LOC111012075 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_008466650.19.75e-6987.10PREDICTED: F-box/WD repeat-containing protein sel-10-like [Cucumis melo][more]
XP_038897273.11.21e-5974.29protein JINGUBANG-like [Benincasa hispida][more]
KAA0038617.13.16e-5172.13F-box/WD repeat-containing protein sel-10-like [Cucumis melo var. makuwa] >TYK31... [more]
XP_021646534.11.88e-4143.17protein JINGUBANG-like isoform X3 [Hevea brasiliensis][more]
QHO16809.12.62e-3937.04uncharacterized protein DS421_10g306770 [Arachis hypogaea][more]
Match NameE-valueIdentityDescription
AT3G50390.11.7e-1247.89Transducin/WD40 repeat-like superfamily protein [more]
AT4G34380.15.6e-1143.75Transducin/WD40 repeat-like superfamily protein [more]
AT3G18950.11.8e-0945.83Transducin/WD40 repeat-like superfamily protein [more]
AT1G49450.13.1e-0942.86Transducin/WD40 repeat-like superfamily protein [more]
AT1G47610.13.1e-0930.83Transducin/WD40 repeat-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 156..207
e-value: 0.53
score: 18.8
coord: 57..98
e-value: 0.12
score: 21.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 158..206
e-value: 0.04
score: 14.8
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 5..252
e-value: 3.9E-17
score: 64.0
NoneNo IPR availablePANTHERPTHR22844F-BOX AND WD40 DOMAIN PROTEINcoord: 59..112
NoneNo IPR availablePANTHERPTHR22844:SF213OS01G0232200 PROTEINcoord: 59..112
NoneNo IPR availablePANTHERPTHR22844:SF213OS01G0232200 PROTEINcoord: 137..252
NoneNo IPR availablePANTHERPTHR22844F-BOX AND WD40 DOMAIN PROTEINcoord: 137..252
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 54..208

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy4G068670.1Chy4G068670.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding