Bhi06G000502 (gene) Wax gourd (B227) v1

Overview
NameBhi06G000502
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionEnzymatic polyprotein
Locationchr6: 13485833 .. 13486198 (-)
RNA-Seq ExpressionBhi06G000502
SyntenyBhi06G000502
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGTCCCAAAGCTTCTACAATGGAATAAACTCACGCAAAATCCAGTTTGGAGAATTCCAGGAGCAAATACCCATGTTACAAAGCAAAGTGAGGATGCTATGATCACCGAGCACCATAATGGGGATGTTGAAGTTAAGTTCTATTCAGAACCAAGATATCCCAGAATTCAAGAAATTATGAGTGGTAGGCCAAGCATTTCATCCGAAACACGACCAACTAGCAACATTTCCAGATCTATTCCCAAATCTAGGTCAATGAGAACGTCCTGGATTTCGATAGATCGATTCCATACATTCATTATGAAAGAAATTAGGGTTCCTTATCTCCTACTCAATTCAACATGGAAAGAAGATCGGAGCTAA

mRNA sequence

ATGACTGTCCCAAAGCTTCTACAATGGAATAAACTCACGCAAAATCCAGTTTGGAGAATTCCAGGAGCAAATACCCATGTTACAAAGCAAAGTGAGGATGCTATGATCACCGAGCACCATAATGGGGATGTTGAAGTTAAGTTCTATTCAGAACCAAGATATCCCAGAATTCAAGAAATTATGAGTGGTAGGCCAAGCATTTCATCCGAAACACGACCAACTAGCAACATTTCCAGATCTATTCCCAAATCTAGGTCAATGAGAACGTCCTGGATTTCGATAGATCGATTCCATACATTCATTATGAAAGAAATTAGGGTTCCTTATCTCCTACTCAATTCAACATGGAAAGAAGATCGGAGCTAA

Coding sequence (CDS)

ATGACTGTCCCAAAGCTTCTACAATGGAATAAACTCACGCAAAATCCAGTTTGGAGAATTCCAGGAGCAAATACCCATGTTACAAAGCAAAGTGAGGATGCTATGATCACCGAGCACCATAATGGGGATGTTGAAGTTAAGTTCTATTCAGAACCAAGATATCCCAGAATTCAAGAAATTATGAGTGGTAGGCCAAGCATTTCATCCGAAACACGACCAACTAGCAACATTTCCAGATCTATTCCCAAATCTAGGTCAATGAGAACGTCCTGGATTTCGATAGATCGATTCCATACATTCATTATGAAAGAAATTAGGGTTCCTTATCTCCTACTCAATTCAACATGGAAAGAAGATCGGAGCTAA

Protein sequence

MTVPKLLQWNKLTQNPVWRIPGANTHVTKQSEDAMITEHHNGDVEVKFYSEPRYPRIQEIMSGRPSISSETRPTSNISRSIPKSRSMRTSWISIDRFHTFIMKEIRVPYLLLNSTWKEDRS
Homology
BLAST of Bhi06G000502 vs. ExPASy TrEMBL
Match: A0A5D3CLG3 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00900 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 4.0e-15
Identity = 51/108 (47.22%), Postives = 71/108 (65.74%), Query Frame = 0

Query: 1   MTVPKLLQWNKLTQNPVWRIPGANTHVTKQSEDAMITEHHNGDVEVKFYSEPRYPRIQEI 60
           MTVPKLL W++LT+NPVW I    T  T++S  A ITE+ +G VEV+F  EP +P I+EI
Sbjct: 12  MTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEEPHHPPIREI 71

Query: 61  MSGRPSISSETRPTSNISRSIPKSRSMRTSWISIDRFHTFIMKEIRVP 109
            +GR S+ SE +PT+   R IP+S SMR S +  ++F   + K+   P
Sbjct: 72  YNGRSSV-SEYQPTTR-ERPIPRSNSMRMS-VDFEQFIPDVQKKTLAP 116

BLAST of Bhi06G000502 vs. ExPASy TrEMBL
Match: A0A5A7VEN9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00970 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.0e-14
Identity = 40/90 (44.44%), Postives = 62/90 (68.89%), Query Frame = 0

Query: 1   MTVPKLLQWNKLTQNPVWRIPGANTHVTKQSEDAMITEHHNGDVEVKFYSEPRYPRIQEI 60
           MT+PK LQW ++ QNPVW++        + S +A ITE  +G++E++F  E RYP+I+EI
Sbjct: 149 MTIPKTLQWEEINQNPVWKLQRVTAPAKRTSTEASITEFPDGNIEIQFNYEARYPKIREI 208

Query: 61  MSGRPSISSETRPTSNISRSIPKSRSMRTS 91
           M+  PS+SS+TR  ++   S  +SR+MRT+
Sbjct: 209 MNSHPSMSSDTRTINSFPESFRRSRTMRTA 238

BLAST of Bhi06G000502 vs. ExPASy TrEMBL
Match: A0A5A7VKK8 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002180 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.7e-13
Identity = 43/90 (47.78%), Postives = 60/90 (66.67%), Query Frame = 0

Query: 1   MTVPKLLQWNKLTQNPVWRIPGANTHVTKQSEDAMITEHHNGDVEVKFYSEPRYPRIQEI 60
           MT+P+ L+W  LT++P+W++ G  T V + S +A ITE  N +VEV+F SE  YPRI EI
Sbjct: 247 MTIPRTLKWADLTKDPIWKLQGETTPVRRNSTEASITEFPNRNVEVQFNSETSYPRISEI 306

Query: 61  MSGRPSISSETRPTSNISRSIPKSRSMRTS 91
           MS RPS SS  R  S+   ++ +S S+R S
Sbjct: 307 MSSRPSTSSIARSESSFPDTLRRSESIRAS 336

BLAST of Bhi06G000502 vs. ExPASy TrEMBL
Match: A0A5D3BN76 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75441G00050 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.7e-13
Identity = 43/90 (47.78%), Postives = 60/90 (66.67%), Query Frame = 0

Query: 1   MTVPKLLQWNKLTQNPVWRIPGANTHVTKQSEDAMITEHHNGDVEVKFYSEPRYPRIQEI 60
           MT+P+ L+W  LT++P+W++ G  T V + S +A ITE  N +VEV+F SE  YPRI EI
Sbjct: 247 MTIPRTLKWADLTKDPIWKLQGETTPVRRNSTEASITEFPNRNVEVQFNSETSYPRISEI 306

Query: 61  MSGRPSISSETRPTSNISRSIPKSRSMRTS 91
           MS RPS SS  R  S+   ++ +S S+R S
Sbjct: 307 MSSRPSTSSIARSESSFPDTLRRSESIRAS 336

BLAST of Bhi06G000502 vs. ExPASy TrEMBL
Match: A0A5A7T6R6 (Zf-CCHC domain-containing protein/MP domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G00430 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.7e-13
Identity = 45/99 (45.45%), Postives = 66/99 (66.67%), Query Frame = 0

Query: 1   MTVPKLLQWNKLTQNPVWRIPGANTHVTKQSEDAMITEHHNGDVEVKFYSEPRYPRIQEI 60
           MT+P+ L+WN+LT+NP+W++ G    VT+ S +A ITE  +G+VEV+F S   YPRI EI
Sbjct: 62  MTIPRNLKWNELTKNPIWKLQGEKAPVTRSSTEASITEFPDGNVEVQFNSGLSYPRISEI 121

Query: 61  MSGRPSISSETRPTSNISRSIPKSRSMRTSWISIDRFHT 100
           MS RPS SS  +  ++   ++ +S S+R    S+D  HT
Sbjct: 122 MSSRPSTSS-IKSEASYRETLRRSESIRA---SVDFSHT 156

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CLG34.0e-1547.22Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00900 PE... [more]
A0A5A7VEN92.0e-1444.44Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VKK81.7e-1347.78Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21... [more]
A0A5D3BN761.7e-1347.78Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75... [more]
A0A5A7T6R63.7e-1345.45Zf-CCHC domain-containing protein/MP domain-containing protein OS=Cucumis melo v... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M000502Bhi06M000502mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity