CmaCh18G006510.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G006510.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein FAF-like, chloroplastic
Location	Cma_Chr18: 5921808 .. 5922566 (+)
Sequence length	759
RNA-Seq Expression	CmaCh18G006510.1
Synteny	CmaCh18G006510.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCTGTGGAAGCCTGCAACACATCTTCGAAACCCCATTACCGGAGAATCCAACCCTTCTCGACACACTCTCGTCATGGAGCCAGATTATATCTGTGACGCCATCACAACAGCAATCGTCGTTTACAGAGATTTTTGGAGAGCTTCATTTCAAAGAGAGTTTTGTTCCTCCTTTGTCACCTCAGTTGTCTTTGACAGAATCGAACTCTCCGTCTCCTGCTGCTGCCACCGTTGATATCATCCCATGGAAAGAACCGTCGTCAAATGGTGAATCTTCCAGCTCCCATGGGAGAAGTAATAGCTTCTCATCAACCAATTCAGAAAGCCTGCAACTCTGCACAGAAGGGCTTGGGTATGAAAGCTTAGATGATGGTGAGGATTTGGAAGGGGGGATGGATGAACAGGAATGGCAGAGGGAGGAAGAAGAGGAAGAGACCTTAAAGAAACAGATTCAGGATCCTATTTGGAATCCTGGGATGATTAAGAGGACAAAATCTGCTAATGTTGATGATTTTCCTCCTCCAATTTCTTGTATGGGGAACAGTGGGAAGCCTTGGGTTGGATTCAAATCCTATAGATATGGTGGAAGGTTCATATTGAAGGAAATAAGAGTCCCTACCCATGAATTTCTACATGCTTCCCGCGAAAATGGACGCCTGAAACTGCATATTCTCGTTCCTAATAAGCAAACCAGAGAGGCCAAGGAAGAAGACGACGACAACAAACAACAACAACAACAACAACACGAAGAATAA

mRNA sequence

ATGGCTGCCTGTGGAAGCCTGCAACACATCTTCGAAACCCCATTACCGGAGAATCCAACCCTTCTCGACACACTCTCGTCATGGAGCCAGATTATATCTGTGACGCCATCACAACAGCAATCGTCGTTTACAGAGATTTTTGGAGAGCTTCATTTCAAAGAGAGTTTTGTTCCTCCTTTGTCACCTCAGTTGTCTTTGACAGAATCGAACTCTCCGTCTCCTGCTGCTGCCACCGTTGATATCATCCCATGGAAAGAACCGTCGTCAAATGGTGAATCTTCCAGCTCCCATGGGAGAAGTAATAGCTTCTCATCAACCAATTCAGAAAGCCTGCAACTCTGCACAGAAGGGCTTGGGTATGAAAGCTTAGATGATGGTGAGGATTTGGAAGGGGGGATGGATGAACAGGAATGGCAGAGGGAGGAAGAAGAGGAAGAGACCTTAAAGAAACAGATTCAGGATCCTATTTGGAATCCTGGGATGATTAAGAGGACAAAATCTGCTAATGTTGATGATTTTCCTCCTCCAATTTCTTGTATGGGGAACAGTGGGAAGCCTTGGGTTGGATTCAAATCCTATAGATATGGTGGAAGGTTCATATTGAAGGAAATAAGAGTCCCTACCCATGAATTTCTACATGCTTCCCGCGAAAATGGACGCCTGAAACTGCATATTCTCGTTCCTAATAAGCAAACCAGAGAGGCCAAGGAAGAAGACGACGACAACAAACAACAACAACAACAACAACACGAAGAATAA

Coding sequence (CDS)

ATGGCTGCCTGTGGAAGCCTGCAACACATCTTCGAAACCCCATTACCGGAGAATCCAACCCTTCTCGACACACTCTCGTCATGGAGCCAGATTATATCTGTGACGCCATCACAACAGCAATCGTCGTTTACAGAGATTTTTGGAGAGCTTCATTTCAAAGAGAGTTTTGTTCCTCCTTTGTCACCTCAGTTGTCTTTGACAGAATCGAACTCTCCGTCTCCTGCTGCTGCCACCGTTGATATCATCCCATGGAAAGAACCGTCGTCAAATGGTGAATCTTCCAGCTCCCATGGGAGAAGTAATAGCTTCTCATCAACCAATTCAGAAAGCCTGCAACTCTGCACAGAAGGGCTTGGGTATGAAAGCTTAGATGATGGTGAGGATTTGGAAGGGGGGATGGATGAACAGGAATGGCAGAGGGAGGAAGAAGAGGAAGAGACCTTAAAGAAACAGATTCAGGATCCTATTTGGAATCCTGGGATGATTAAGAGGACAAAATCTGCTAATGTTGATGATTTTCCTCCTCCAATTTCTTGTATGGGGAACAGTGGGAAGCCTTGGGTTGGATTCAAATCCTATAGATATGGTGGAAGGTTCATATTGAAGGAAATAAGAGTCCCTACCCATGAATTTCTACATGCTTCCCGCGAAAATGGACGCCTGAAACTGCATATTCTCGTTCCTAATAAGCAAACCAGAGAGGCCAAGGAAGAAGACGACGACAACAAACAACAACAACAACAACAACACGAAGAATAA

Protein sequence

MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVPPLSPQLSLTESNSPSPAAATVDIIPWKEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGLGYESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPPPISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEEDDDNKQQQQQQHEE

Homology

[Close]

BLAST of CmaCh18G006510.1 vs. ExPASy TrEMBL
Match: A0A6J1HTG8 (protein FAF-like, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466604 PE=3 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.5e-136
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVPPL 60
           MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVPPL
Sbjct: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVPPL 60

Query: 61  SPQLSLTESNSPSPAAATVDIIPWKEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGLGY 120
           SPQLSLTESNSPSPAAATVDIIPWKEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGLGY
Sbjct: 61  SPQLSLTESNSPSPAAATVDIIPWKEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGLGY 120

Query: 121 ESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPPPISCM 180
           ESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPPPISCM
Sbjct: 121 ESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPPPISCM 180

Query: 181 GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEEDD 240
           GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEEDD
Sbjct: 181 GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEEDD 240

Query: 241 DNKQQQQQQHEE 253
           DNKQQQQQQHEE
Sbjct: 241 DNKQQQQQQHEE 252

[Close]

BLAST of CmaCh18G006510.1 vs. ExPASy TrEMBL
Match: A0A6J1G079 (uncharacterized protein LOC111449517 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449517 PE=3 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 5.0e-129
Identity = 240/252 (95.24%), Postives = 247/252 (98.02%), Query Frame = 0


Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVPPL 60
           MAACGSLQHIFETPLPENPTLLDTLSSWSQII+VTPS+QQSSFTEIFGELHFKESFVPPL
Sbjct: 73  MAACGSLQHIFETPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKESFVPPL 132

Query: 61  SPQLSLTESNSPSPAAATVDIIPWKEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGLGY 120
           SPQLSLTESNSPSPAA  V IIPWKEP SNGESSSSHGRSNSFSSTNSESLQLCTEGLGY
Sbjct: 133 SPQLSLTESNSPSPAA--VGIIPWKEPLSNGESSSSHGRSNSFSSTNSESLQLCTEGLGY 192

Query: 121 ESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPPPISCM 180
           ESLDDGEDL+GGMDE+EWQREEEEEETLKKQIQ+PIW PGMIKRTKSANVDDFPPPISCM
Sbjct: 193 ESLDDGEDLKGGMDEEEWQREEEEEETLKKQIQNPIWKPGMIKRTKSANVDDFPPPISCM 252

Query: 181 GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEEDD 240
           GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTR+AKEEDD
Sbjct: 253 GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTRDAKEEDD 312

Query: 241 DNKQQQQQQHEE 253
           DNKQQQQ+QHEE
Sbjct: 313 DNKQQQQEQHEE 322

[Close]

BLAST of CmaCh18G006510.1 vs. ExPASy TrEMBL
Match: A0A6J1G0A0 (uncharacterized protein LOC111449517 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449517 PE=3 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 2.3e-126
Identity = 238/257 (92.61%), Postives = 247/257 (96.11%), Query Frame = 0


Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVPPL 60
           MAACGSLQHIFETPLPENPTLLDTLSSWSQII+VTPS+QQSSFTEIFGELHFKESFVPPL
Sbjct: 73  MAACGSLQHIFETPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKESFVPPL 132

Query: 61  SPQLSLTESNSPSPAAATVDIIPWKEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGLGY 120
           SPQLSLTESNSPSPAA  V IIPWKEP SNGESSSSHGRSNSFSSTNSESLQLCTEGLGY
Sbjct: 133 SPQLSLTESNSPSPAA--VGIIPWKEPLSNGESSSSHGRSNSFSSTNSESLQLCTEGLGY 192

Query: 121 ESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPPPISCM 180
           ESLDDGEDL+GGMDE+EWQREEEEEETLKKQIQ+PIW PGMIKRTKSANVDDFPPPISCM
Sbjct: 193 ESLDDGEDLKGGMDEEEWQREEEEEETLKKQIQNPIWKPGMIKRTKSANVDDFPPPISCM 252

Query: 181 GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEEDD 240
           GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTR+AKEEDD
Sbjct: 253 GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTRDAKEEDD 312

Query: 241 DNKQQ-----QQQQHEE 253
           DNKQQ     QQ+QH++
Sbjct: 313 DNKQQEQHDKQQEQHDK 327

[Close]

BLAST of CmaCh18G006510.1 vs. ExPASy TrEMBL
Match: A0A5A7T1P9 (Protein FAF-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002630 PE=3 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.9e-91
Identity = 185/247 (74.90%), Postives = 208/247 (84.21%), Query Frame = 0


Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVP-P 60
           MAACGSLQHIFE PLPENPTLL+ LSSW+QI+ + P+ + SSFTEIFGELHFKESFVP  
Sbjct: 1   MAACGSLQHIFENPLPENPTLLEHLSSWNQIMPLKPT-EPSSFTEIFGELHFKESFVPHS 60

Query: 61  LSPQLSLTESNSPSPAAATVDIIPWKEPSSNG--ESSSSHGRSNSFSSTNSESLQLCTEG 120
            S   SLTES++ + AA  +    WKEP SNG  E S+ H +SNSFSSTNSESLQLCTEG
Sbjct: 61  FSSLSSLTESSNSTSAADDL----WKEPLSNGEREPSNFHRKSNSFSSTNSESLQLCTEG 120

Query: 121 LGYESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPPPI 180
           LGYESLDD EDL+G MDE+EW +E+EEE TLKKQIQ P   PGMI RTKSAN++DFPPPI
Sbjct: 121 LGYESLDDVEDLKGVMDEKEWPKEDEEERTLKKQIQYPNLKPGMINRTKSANMEDFPPPI 180

Query: 181 SCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKE 240
           SCMG SGKPWVGFKSYRYGGRFILKE+RVPTHEFLHASRENGRLKLHILVPN+QTRE ++
Sbjct: 181 SCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGED 240

Query: 241 EDDDNKQ 245
           E DDN +
Sbjct: 241 EADDNHE 242

[Close]

BLAST of CmaCh18G006510.1 vs. ExPASy TrEMBL
Match: A0A1S3CEL7 (protein FAF-like, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499860 PE=3 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.9e-91
Identity = 185/247 (74.90%), Postives = 208/247 (84.21%), Query Frame = 0


Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVP-P 60
           MAACGSLQHIFE PLPENPTLL+ LSSW+QI+ + P+ + SSFTEIFGELHFKESFVP  
Sbjct: 1   MAACGSLQHIFENPLPENPTLLEHLSSWNQIMPLKPT-EPSSFTEIFGELHFKESFVPHS 60

Query: 61  LSPQLSLTESNSPSPAAATVDIIPWKEPSSNG--ESSSSHGRSNSFSSTNSESLQLCTEG 120
            S   SLTES++ + AA  +    WKEP SNG  E S+ H +SNSFSSTNSESLQLCTEG
Sbjct: 61  FSSLSSLTESSNSTSAADDL----WKEPLSNGEREPSNFHRKSNSFSSTNSESLQLCTEG 120

Query: 121 LGYESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPPPI 180
           LGYESLDD EDL+G MDE+EW +E+EEE TLKKQIQ P   PGMI RTKSAN++DFPPPI
Sbjct: 121 LGYESLDDVEDLKGVMDEKEWPKEDEEERTLKKQIQYPNLKPGMINRTKSANMEDFPPPI 180

Query: 181 SCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKE 240
           SCMG SGKPWVGFKSYRYGGRFILKE+RVPTHEFLHASRENGRLKLHILVPN+QTRE ++
Sbjct: 181 SCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGED 240

Query: 241 EDDDNKQ 245
           E DDN +
Sbjct: 241 EADDNHE 242

[Close]

BLAST of CmaCh18G006510.1 vs. NCBI nr
Match: XP_022967100.1 (protein FAF-like, chloroplastic [Cucurbita maxima])

HSP 1 Score: 495.4 bits (1274), Expect = 3.0e-136
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVPPL 60
           MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVPPL
Sbjct: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVPPL 60

Query: 61  SPQLSLTESNSPSPAAATVDIIPWKEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGLGY 120
           SPQLSLTESNSPSPAAATVDIIPWKEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGLGY
Sbjct: 61  SPQLSLTESNSPSPAAATVDIIPWKEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGLGY 120

Query: 121 ESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPPPISCM 180
           ESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPPPISCM
Sbjct: 121 ESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPPPISCM 180

Query: 181 GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEEDD 240
           GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEEDD
Sbjct: 181 GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEEDD 240

Query: 241 DNKQQQQQQHEE 253
           DNKQQQQQQHEE
Sbjct: 241 DNKQQQQQQHEE 252

[Close]

BLAST of CmaCh18G006510.1 vs. NCBI nr
Match: KAG6573629.1 (hypothetical protein SDJN03_27516, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 470.3 bits (1209), Expect = 1.0e-128
Identity = 241/261 (92.34%), Postives = 248/261 (95.02%), Query Frame = 0


Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVPPL 60
           MAACGSLQHIFE PLPENPTLLDTLSSWSQII+VTPS+QQSSFTEIFGELHFKESFVPPL
Sbjct: 1   MAACGSLQHIFEAPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKESFVPPL 60

Query: 61  SPQLSLTESNSPSPAAATVDIIPWKEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGLGY 120
           SPQLSLTESNSPSP+ A VDIIPWKEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGLGY
Sbjct: 61  SPQLSLTESNSPSPSPAAVDIIPWKEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGLGY 120

Query: 121 ESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPPPISCM 180
           ESLDDGEDL+GGMDE+EWQREEEEEETLKKQIQ+PIW PGMIKRTKSANVDDFPPPISCM
Sbjct: 121 ESLDDGEDLKGGMDEEEWQREEEEEETLKKQIQNPIWKPGMIKRTKSANVDDFPPPISCM 180

Query: 181 GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEEDD 240
           GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEEDD
Sbjct: 181 GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEEDD 240

Query: 241 DNK---------QQQQQQHEE 253
           DNK         QQQQ+QHEE
Sbjct: 241 DNKQQEQHDKQQQQQQEQHEE 261

[Close]

BLAST of CmaCh18G006510.1 vs. NCBI nr
Match: XP_022945206.1 (uncharacterized protein LOC111449517 isoform X2 [Cucurbita moschata])

HSP 1 Score: 470.3 bits (1209), Expect = 1.0e-128
Identity = 240/252 (95.24%), Postives = 247/252 (98.02%), Query Frame = 0


Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVPPL 60
           MAACGSLQHIFETPLPENPTLLDTLSSWSQII+VTPS+QQSSFTEIFGELHFKESFVPPL
Sbjct: 73  MAACGSLQHIFETPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKESFVPPL 132

Query: 61  SPQLSLTESNSPSPAAATVDIIPWKEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGLGY 120
           SPQLSLTESNSPSPAA  V IIPWKEP SNGESSSSHGRSNSFSSTNSESLQLCTEGLGY
Sbjct: 133 SPQLSLTESNSPSPAA--VGIIPWKEPLSNGESSSSHGRSNSFSSTNSESLQLCTEGLGY 192

Query: 121 ESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPPPISCM 180
           ESLDDGEDL+GGMDE+EWQREEEEEETLKKQIQ+PIW PGMIKRTKSANVDDFPPPISCM
Sbjct: 193 ESLDDGEDLKGGMDEEEWQREEEEEETLKKQIQNPIWKPGMIKRTKSANVDDFPPPISCM 252

Query: 181 GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEEDD 240
           GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTR+AKEEDD
Sbjct: 253 GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTRDAKEEDD 312

Query: 241 DNKQQQQQQHEE 253
           DNKQQQQ+QHEE
Sbjct: 313 DNKQQQQEQHEE 322

[Close]

BLAST of CmaCh18G006510.1 vs. NCBI nr
Match: KAG7012710.1 (hypothetical protein SDJN02_25463, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 466.5 bits (1199), Expect = 1.5e-127
Identity = 240/254 (94.49%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVPPL 60
           MAACGSLQHIFE PLPENPTLLDTLSSWSQII+VTPS+QQSSFTEIFGELHFKESFVPPL
Sbjct: 1   MAACGSLQHIFEAPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKESFVPPL 60

Query: 61  SPQLSLTESN--SPSPAAATVDIIPWKEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGL 120
           SPQLSLTESN  SPSP+ A VDIIPWKEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGL
Sbjct: 61  SPQLSLTESNSPSPSPSPAAVDIIPWKEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGL 120

Query: 121 GYESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPPPIS 180
           GYESLDDGEDL+GGMDE+EWQREEEEEETLKKQIQ+PIW PGMIKRTKSANVDDFPPPIS
Sbjct: 121 GYESLDDGEDLKGGMDEEEWQREEEEEETLKKQIQNPIWKPGMIKRTKSANVDDFPPPIS 180

Query: 181 CMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEE 240
           CMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEE
Sbjct: 181 CMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEE 240

Query: 241 DDDNKQQQQQQHEE 253
           DDDNK  QQQQHEE
Sbjct: 241 DDDNK--QQQQHEE 252

[Close]

BLAST of CmaCh18G006510.1 vs. NCBI nr
Match: XP_022945205.1 (uncharacterized protein LOC111449517 isoform X1 [Cucurbita moschata])

HSP 1 Score: 461.5 bits (1186), Expect = 4.8e-126
Identity = 238/257 (92.61%), Postives = 247/257 (96.11%), Query Frame = 0


Query: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVPPL 60
           MAACGSLQHIFETPLPENPTLLDTLSSWSQII+VTPS+QQSSFTEIFGELHFKESFVPPL
Sbjct: 73  MAACGSLQHIFETPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKESFVPPL 132

Query: 61  SPQLSLTESNSPSPAAATVDIIPWKEPSSNGESSSSHGRSNSFSSTNSESLQLCTEGLGY 120
           SPQLSLTESNSPSPAA  V IIPWKEP SNGESSSSHGRSNSFSSTNSESLQLCTEGLGY
Sbjct: 133 SPQLSLTESNSPSPAA--VGIIPWKEPLSNGESSSSHGRSNSFSSTNSESLQLCTEGLGY 192

Query: 121 ESLDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSANVDDFPPPISCM 180
           ESLDDGEDL+GGMDE+EWQREEEEEETLKKQIQ+PIW PGMIKRTKSANVDDFPPPISCM
Sbjct: 193 ESLDDGEDLKGGMDEEEWQREEEEEETLKKQIQNPIWKPGMIKRTKSANVDDFPPPISCM 252

Query: 181 GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEEDD 240
           GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTR+AKEEDD
Sbjct: 253 GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTRDAKEEDD 312

Query: 241 DNKQQ-----QQQQHEE 253
           DNKQQ     QQ+QH++
Sbjct: 313 DNKQQEQHDKQQEQHDK 327

[Close]

BLAST of CmaCh18G006510.1 vs. TAIR 10
Match: AT5G22390.1 (Protein of unknown function (DUF3049) )

HSP 1 Score: 82.4 bits (202), Expect = 5.6e-16
Identity = 85/260 (32.69%), Postives = 121/260 (46.54%), Query Frame = 0


Query: 1   MAACGSLQHIFETPLPEN--PTLLDTLSS---W--SQIISVTPSQQQS--SFTEIFGELH 60
           MAA GS   IF+ P  +N   + LDTLSS   W  S+ + VT    ++   FTEIFGELH
Sbjct: 1   MAAYGSFHRIFDNPRQDNSPKSFLDTLSSSSPWNPSKGLHVTTHHDETPPPFTEIFGELH 60

Query: 61  FKESFVPPLSPQLSLTESNSPSPAAATVDIIPWKEPSSNGESSSSHGRSNSFSSTNSESL 120
           F+E                                        SSH      S+ NS SL
Sbjct: 61  FRE----------------------------------------SSHSSYEKTSAENS-SL 120

Query: 121 QLCTEGLGYES---LDDGEDLEGGMDEQEWQREEEEEETLKKQIQDPIWNPGMIKRTKSA 180
           QLCTEGLG ES   L+D E + G  D  + + E + ++      ++  W P   +R    
Sbjct: 121 QLCTEGLGSESYYGLED-EKVNGDGDGDDDEIEVKGKDNGSNDEEE--WEPRRKER---- 180

Query: 181 NVDDFPPPISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVP 240
              ++PP ++ M         FK+YR  GR +L+E+R+P  EFL ASRE+GRL+L ++ P
Sbjct: 181 --KEYPPAMTRM--------SFKTYRKEGRLVLEEVRIPRREFLRASREDGRLRLKLVQP 202

Query: 241 NKQTREAKEEDDDNKQQQQQ 249
                E +E + D    + +
Sbjct: 241 EDDHDEEEENEKDKHVDEDE 202

[Close]

BLAST of CmaCh18G006510.1 vs. TAIR 10
Match: AT5G19260.1 (Protein of unknown function (DUF3049) )

HSP 1 Score: 42.0 bits (97), Expect = 8.5e-04
Identity = 50/168 (29.76%), Postives = 77/168 (45.83%), Query Frame = 0


Query: 88  SSNGESSSSHGRSNSFSSTNSESLQLCTEGLGYESLDDGEDLEG--GMDEQEWQREEEEE 147
           SS  ESS    R +S  + + +SL LCTE LG ES  D  D++    +D Q     E   
Sbjct: 90  SSEKESSYYVQRPSSCRALSDQSLALCTENLGSESGSDVTDIDELFSLDVQTKNLGETTT 149

Query: 148 ETLKKQIQDPIWNPGMIKRTKSANVDDFPPPISCMGNSGKPWVGFKSYRYGGRFILKEIR 207
           ET             +  R +S +  D PPP++ M   G   +  + +R  GR ++    
Sbjct: 150 ETRT-----------LKSRKRSVSPSDLPPPLTTM--RGFQCIQMRPHRENGRLVMTATN 209

Query: 208 VPTHE-FLHASRENGRLKLHILVPNKQTREAKEEDDDNKQQQQQQHEE 253
            P       A R NGRL+L IL  + +  E +EE  + ++ ++ + EE
Sbjct: 210 APPRNGCFQADRSNGRLRLSILKDSNEFVENEEETIEPEETEEYEEEE 244

The following BLAST results are available for this feature:

BLAST of CmaCh18G006510.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh18G006510.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HTG8	1.5e-136	100.00	protein FAF-like, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466604 PE=3...	[more]
A0A6J1G079	5.0e-129	95.24	uncharacterized protein LOC111449517 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1G0A0	2.3e-126	92.61	uncharacterized protein LOC111449517 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7T1P9	1.9e-91	74.90	Protein FAF-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002...	[more]
A0A1S3CEL7	1.9e-91	74.90	protein FAF-like, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499860 PE=3 SV=...	[more]

BLAST of CmaCh18G006510.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967100.1	3.0e-136	100.00	protein FAF-like, chloroplastic [Cucurbita maxima]	[more]
KAG6573629.1	1.0e-128	92.34	hypothetical protein SDJN03_27516, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022945206.1	1.0e-128	95.24	uncharacterized protein LOC111449517 isoform X2 [Cucurbita moschata]	[more]
KAG7012710.1	1.5e-127	94.49	hypothetical protein SDJN02_25463, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022945205.1	4.8e-126	92.61	uncharacterized protein LOC111449517 isoform X1 [Cucurbita moschata]	[more]

BLAST of CmaCh18G006510.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22390.1	5.6e-16	32.69	Protein of unknown function (DUF3049)	[more]
AT5G19260.1	8.5e-04	29.76	Protein of unknown function (DUF3049)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 229..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..142
None	No IPR available	PANTHER	PTHR33155:SF9	FANTASTIC FOUR-LIKE PROTEIN (DUF3049)	coord: 10..247
IPR021410	The fantastic four family	PFAM	PF11250	FAF	coord: 173..224 e-value: 4.5E-20 score: 71.6
IPR021410	The fantastic four family	PANTHER	PTHR33155	FANTASTIC FOUR-LIKE PROTEIN (DUF3049)	coord: 10..247

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh18G006510	CmaCh18G006510	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh18G006510.1:exon:1985	CmaCh18G006510.1:exon:1985	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh18G006510.1:cds	CmaCh18G006510.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh18G006510.1	CmaCh18G006510.1-protein	polypeptide