CmaCh13G010880 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh13G010880
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Remorin_C domain-containing protein
Location	Cma_Chr13: 8211334 .. 8213071 (+)
RNA-Seq Expression	CmaCh13G010880
Synteny	CmaCh13G010880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGCGATGAAGAAGAAAATGCCTTGCTTCGGAATGGAGTTGAGTGCACAGAAGGCATTTCCTCGCTTCGCAACTTTCCTGCGTAAAGACACAATACATATTAACTTCAGAAACAGTTTCAGAAATTTGAGAGGTATCGATATAAGCTTTAGATTTCAGCACATGGAAACTTTGACTCATCAAAGAAGGTATACTTTTCTTGTCTCTTGATCTCCATTCCCAGTTTGAATATTTGATGTATGTTCATCACTCTTTCATCTGGTTCATCATTTACAACCCAGAAAGTTTTACAAGAGATAAAATGATAAGAACCATTGAAACAGAAAAGTAATCAAATCAGATCTCTGTCACCATTGGCCAAACTCAGCTCAGCTTAGGTTCTACAACACCAAAGAGTTTCCTCTTCTTGTCCTCTTTTATTTGAATACTGAAAGTAATATGGCTATTGACTGCTTTGTAGGCTGAGTTTTTCGGATTCAGGACGACATAACAAAGATGCTTCCATCAAACCAAGAGATGGAATTCCACAGCAAAAAACAAGATCCTCCAAAGAGGGTACTGATAAAAAGGAGTCCAAGAAGTTACGGTGGTATTTTGCAAACGAAATGAATGAGGATTATGATTCAAGGGATTTAGAGTTTGCCACTGCAGCAGCATCAGCTGCATTTGCAATTCGCTCACAAGAAGAAACTGATTTACAATACCAGAAAAAGAAGAGAGGAAGTCTGGAAACGCCATTAACAAAGGTTAAAACCAGAAAAGATGGCATAACCAGGCGACCGTCTAACAAAGAAACAACAAATCCTGGTAAAATTTAAACATAGAGCTTAGAAATTTCCTATAAGAATTTCTTGTCACAAAAAGTATCATGTTCATTACACTAGGCCAATCTTCAATAAAGAAGCCAACGGGACATGAAAAGGACTCGATAACTGGAATGCCTTTATCGCCACCAAGACGAAGCCTTGTAGAAACAAGAGCTGATGTGTGGGAGAGACATAACATGGAGAAGATTAGAAAAAGGTATATACTAATTTCTGCATTAATCAATATTCAGGAGTGGACCTCACAGTTCCAAGTTCTCAAGTTCATGAAACACTTGCACTAAAAGATTTCTCACCTTAATCCTGAAACTTGCTTATGGAGTTCTTTTCTAAGACAATCTCATATTTCAGGTACGAAAAGATAAAATTGTCAATTCATGCCTGGGAGAATAAGAAGAAAATGCATGCCAAACTTCATAAGGAAAAGAAAATGGTCTTACCCCACCTTTTGGATGTTTTCCTTACTATAATACATTTTAATGTCAACTGAAAAAAACTTCTGTTCATGAAGGCTGAATTGGAGAACAAGAAGGCACTGTTTCTGCAAAATTACCAGGACAACATAGTACGAATCGACCAGATCACGGGGGGAGCAAGGACACAACTAGAACAAAAAAGAAGAAGGGAAGAGAAGAAAGCAAGAGAAACAGCTAACCGAATCAGGTCGACCGGAAGACTTCCTGTGACTTGTTTCTGCATCCAGTATCACTAACAATGAGACAGTCCTGGTGAAAAGAGAAGCATCAAATCATGCAGCTCCTATTCACTTACACTTCACCTAACAAATTCCAATCCAAAATCAATATCAAGTCATTGTGATGTTGTGTAAATTGTTTTTTATGTTTCTTTCATTGTGGCCTCAAACTCACTCTCAAAGAATGATAGATTTGATTGCATAAACAGAGATAAG

mRNA sequence

ATGGAAGGCGATGAAGAAGAAAATGCCTTGCTTCGGAATGGAGTTGAGTGCACAGAAGGCATTTCCTCGCTTCGCAACTTTCCTGCGCTGAGTTTTTCGGATTCAGGACGACATAACAAAGATGCTTCCATCAAACCAAGAGATGGAATTCCACAGCAAAAAACAAGATCCTCCAAAGAGGGTACTGATAAAAAGGAGTCCAAGAAGTTACGGTGGTATTTTGCAAACGAAATGAATGAGGATTATGATTCAAGGGATTTAGAGTTTGCCACTGCAGCAGCATCAGCTGCATTTGCAATTCGCTCACAAGAAGAAACTGATTTACAATACCAGAAAAAGAAGAGAGGAAGTCTGGAAACGCCATTAACAAAGGTTAAAACCAGAAAAGATGGCATAACCAGGCGACCGTCTAACAAAGAAACAACAAATCCTGGCCAATCTTCAATAAAGAAGCCAACGGGACATGAAAAGGACTCGATAACTGGAATGCCTTTATCGCCACCAAGACGAAGCCTTGTAGAAACAAGAGCTGATGTGTGGGAGAGACATAACATGGAGAAGATTAGAAAAAGGTACGAAAAGATAAAATTGTCAATTCATGCCTGGGAGAATAAGAAGAAAATGCATGCCAAACTTCATAAGGAAAAGAAAATGGCTGAATTGGAGAACAAGAAGGCACTGTTTCTGCAAAATTACCAGGACAACATAGTACGAATCGACCAGATCACGGGGGGAGCAAGGACACAACTAGAACAAAAAAGAAGAAGGGAAGAGAAGAAAGCAAGAGAAACAGCTAACCGAATCAGGTCGACCGGAAGACTTCCTGTGACTTGTTTCTGCATCCAGTATCACTAACAATGAGACAGTCCTGGTGAAAAGAGAAGCATCAAATCATGCAGCTCCTATTCACTTACACTTCACCTAACAAATTCCAATCCAAAATCAATATCAAGTCATTGTGATGTTGTGTAAATTGTTTTTTATGTTTCTTTCATTGTGGCCTCAAACTCACTCTCAAAGAATGATAGATTTGATTGCATAAACAGAGATAAG

Coding sequence (CDS)

ATGGAAGGCGATGAAGAAGAAAATGCCTTGCTTCGGAATGGAGTTGAGTGCACAGAAGGCATTTCCTCGCTTCGCAACTTTCCTGCGCTGAGTTTTTCGGATTCAGGACGACATAACAAAGATGCTTCCATCAAACCAAGAGATGGAATTCCACAGCAAAAAACAAGATCCTCCAAAGAGGGTACTGATAAAAAGGAGTCCAAGAAGTTACGGTGGTATTTTGCAAACGAAATGAATGAGGATTATGATTCAAGGGATTTAGAGTTTGCCACTGCAGCAGCATCAGCTGCATTTGCAATTCGCTCACAAGAAGAAACTGATTTACAATACCAGAAAAAGAAGAGAGGAAGTCTGGAAACGCCATTAACAAAGGTTAAAACCAGAAAAGATGGCATAACCAGGCGACCGTCTAACAAAGAAACAACAAATCCTGGCCAATCTTCAATAAAGAAGCCAACGGGACATGAAAAGGACTCGATAACTGGAATGCCTTTATCGCCACCAAGACGAAGCCTTGTAGAAACAAGAGCTGATGTGTGGGAGAGACATAACATGGAGAAGATTAGAAAAAGGTACGAAAAGATAAAATTGTCAATTCATGCCTGGGAGAATAAGAAGAAAATGCATGCCAAACTTCATAAGGAAAAGAAAATGGCTGAATTGGAGAACAAGAAGGCACTGTTTCTGCAAAATTACCAGGACAACATAGTACGAATCGACCAGATCACGGGGGGAGCAAGGACACAACTAGAACAAAAAAGAAGAAGGGAAGAGAAGAAAGCAAGAGAAACAGCTAACCGAATCAGGTCGACCGGAAGACTTCCTGTGACTTGTTTCTGCATCCAGTATCACTAA

Protein sequence

MEGDEEENALLRNGVECTEGISSLRNFPALSFSDSGRHNKDASIKPRDGIPQQKTRSSKEGTDKKESKKLRWYFANEMNEDYDSRDLEFATAAASAAFAIRSQEETDLQYQKKKRGSLETPLTKVKTRKDGITRRPSNKETTNPGQSSIKKPTGHEKDSITGMPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMHAKLHKEKKMAELENKKALFLQNYQDNIVRIDQITGGARTQLEQKRRREEKKARETANRIRSTGRLPVTCFCIQYH

Homology

[Close]

BLAST of CmaCh13G010880 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.4e-06
Identity = 35/102 (34.31%), Postives = 51/102 (50.00%), Query Frame = 0


Query: 180 WERHNMEKIRKRYEKIKLSIHAWENKKKMHAKLHKEKKMAELENKKALFLQNYQDNIVRI 239
           WE     K   + EK    +HAWEN KK   +   +K   +LE KKA + +  ++ +  I
Sbjct: 110 WEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAI 169

Query: 240 DQITGGARTQLEQKRRREEKKARETANRIRSTGRLP-VTCFC 281
            +     R  +E KR  +  KA ETA + R+TG +P  TC C
Sbjct: 170 HKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKATCGC 211

[Close]

BLAST of CmaCh13G010880 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.2e-05
Identity = 40/130 (30.77%), Postives = 62/130 (47.69%), Query Frame = 0


Query: 150 KKPTGHEKDSITGMPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMH 209
           KK     +D++     +  R SL++     WE     K+  + EK   SI +WEN KK  
Sbjct: 74  KKEGSVNRDAVLARVETEKRMSLIK----AWEEAEKCKVENKAEKKLSSIGSWENNKKAA 133

Query: 210 AKLHKEKKMAELENKKALFLQNYQDNIVRIDQITGGARTQLEQKRRREEKKARETANRIR 269
            +   +K   +LE KKA +++  ++ I +I +     R  +E KR  E  KA E A + R
Sbjct: 134 VEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYR 193

Query: 270 STGRLPVTCF 280
           +TG  P   F
Sbjct: 194 ATGTAPKKLF 199

[Close]

BLAST of CmaCh13G010880 vs. ExPASy TrEMBL
Match: A0A6J1KGF5 (uncharacterized protein LOC111495024 OS=Cucurbita maxima OX=3661 GN=LOC111495024 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 4.0e-135
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 30  LSFSDSGRHNKDASIKPRDGIPQQKTRSSKEGTDKKESKKLRWYFANEMNEDYDSRDLEF 89
           LSFSDSGRHNKDASIKPRDGIPQQKTRSSKEGTDKKESKKLRWYFANEMNEDYDSRDLEF
Sbjct: 62  LSFSDSGRHNKDASIKPRDGIPQQKTRSSKEGTDKKESKKLRWYFANEMNEDYDSRDLEF 121

Query: 90  ATAAASAAFAIRSQEETDLQYQKKKRGSLETPLTKVKTRKDGITRRPSNKETTNPGQSSI 149
           ATAAASAAFAIRSQEETDLQYQKKKRGSLETPLTKVKTRKDGITRRPSNKETTNPGQSSI
Sbjct: 122 ATAAASAAFAIRSQEETDLQYQKKKRGSLETPLTKVKTRKDGITRRPSNKETTNPGQSSI 181

Query: 150 KKPTGHEKDSITGMPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMH 209
           KKPTGHEKDSITGMPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMH
Sbjct: 182 KKPTGHEKDSITGMPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMH 241

Query: 210 AKLHKEKKMAELENKKALFLQNYQDNIVRIDQITGGARTQLEQKRRREEKKARETANRIR 269
           AKLHKEKKMAELENKKALFLQNYQDNIVRIDQITGGARTQLEQKRRREEKKARETANRIR
Sbjct: 242 AKLHKEKKMAELENKKALFLQNYQDNIVRIDQITGGARTQLEQKRRREEKKARETANRIR 301

Query: 270 STGRLPVTCFCIQYH 285
           STGRLPVTCFCIQYH
Sbjct: 302 STGRLPVTCFCIQYH 316

[Close]

BLAST of CmaCh13G010880 vs. ExPASy TrEMBL
Match: A0A6J1EAK4 (uncharacterized protein LOC111431392 OS=Cucurbita moschata OX=3662 GN=LOC111431392 PE=3 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.6e-128
Identity = 245/254 (96.46%), Postives = 247/254 (97.24%), Query Frame = 0


Query: 31  SFSDSGRHNKDASIKPRDGIPQQKTRSSKEGTDKKESKKLRWYFANEMNEDYDSRDLEFA 90
           SFSDSGRHNKDASIKPRDGIPQQKTRSSKEGT KKESKKLRWYFANEMNEDYDSRDLEFA
Sbjct: 11  SFSDSGRHNKDASIKPRDGIPQQKTRSSKEGTHKKESKKLRWYFANEMNEDYDSRDLEFA 70

Query: 91  TAAASAAFAIRSQEETDLQYQKKKRGSLETPLTKVKTRKDGITRRPSNKETTNPGQSSIK 150
           TAAASAAFAIRSQEETDLQYQK K GSLETPLTKVKTRKD ITRRPSNKETTNPGQSSIK
Sbjct: 71  TAAASAAFAIRSQEETDLQYQKNKSGSLETPLTKVKTRKDDITRRPSNKETTNPGQSSIK 130

Query: 151 KPTGHEKDSITGMPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMHA 210
           KPTGHEKDS+TG+PLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMHA
Sbjct: 131 KPTGHEKDSMTGIPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMHA 190

Query: 211 KLHKEKKMAELENKKALFLQNYQDNIVRIDQITGGARTQLEQKRRREEKKARETANRIRS 270
           KLHKEKKMAELENKKALFLQNYQDNIVRIDQIT GAR QLEQKR REEKKARETANRIRS
Sbjct: 191 KLHKEKKMAELENKKALFLQNYQDNIVRIDQITEGARAQLEQKRIREEKKARETANRIRS 250

Query: 271 TGRLPVTCFCIQYH 285
           TGRLPVTCFCIQYH
Sbjct: 251 TGRLPVTCFCIQYH 264

[Close]

BLAST of CmaCh13G010880 vs. ExPASy TrEMBL
Match: A0A6J1KC68 (uncharacterized protein LOC111492995 OS=Cucurbita maxima OX=3661 GN=LOC111492995 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 4.5e-94
Identity = 191/262 (72.90%), Postives = 220/262 (83.97%), Query Frame = 0


Query: 30  LSFSDSGRHNKDASIKPRDGIPQQKTRSSKEGTDKKESKKLRWYFANEMNEDYDSRDLEF 89
           +SFS+ G+H KDASIKPRDGIPQ KTRS KE  DKKESK L+W+F+N+MNEDYDSRD+EF
Sbjct: 42  VSFSEPGQHKKDASIKPRDGIPQPKTRSFKE--DKKESKGLQWHFSNQMNEDYDSRDIEF 101

Query: 90  ATAAASAAFAIRSQEETDLQYQKKKRGSLETPLTKVKTRKD-------GITRRPSNKETT 149
           ATA ASAAFAIRS EE  LQYQKKK+ S ETP+TKVK+RKD        ITRR SNKET 
Sbjct: 102 ATAVASAAFAIRSHEEAKLQYQKKKKESQETPMTKVKSRKDETAALASSITRRLSNKETN 161

Query: 150 NPGQSSIKKPTGHEKDSITGMPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAW 209
           NPGQSSIKKP G+EKD +TG+PL PPRRSLV T+ADVWER+ MEKIRKRY+K K SI  W
Sbjct: 162 NPGQSSIKKPIGNEKDLVTGIPLPPPRRSLVPTKADVWERNKMEKIRKRYQKRKSSILDW 221

Query: 210 ENKKKMHAKLHKEKKMAELENKKALFLQNYQDNIVRIDQITGGARTQLEQKRRREEKKAR 269
           EN+KK+ AKLH EK+ AELE KK++F ++YQD IV++D+I GGARTQLE+KRR+EE KAR
Sbjct: 222 ENEKKLLAKLHMEKEKAELERKKSVFSRHYQDKIVQVDRIAGGARTQLEEKRRKEENKAR 281

Query: 270 ETANRIRSTGRLPVTCFCIQYH 285
           ETANRIRSTGRLPVTCFC Q H
Sbjct: 282 ETANRIRSTGRLPVTCFCFQCH 301

[Close]

BLAST of CmaCh13G010880 vs. ExPASy TrEMBL
Match: A0A5D3BIU6 (Remorin isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001160 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 2.2e-93
Identity = 196/273 (71.79%), Postives = 223/273 (81.68%), Query Frame = 0


Query: 24  LRNFPALSFSDSGRHNKDASIKPRDGIPQQKTRSSKEGTDKKESKKLRWYFANEMNEDYD 83
           L NFP +SFSDSG+  +D +IKPRDGIPQ+KTRS KE  DKKESKKL+WYF+N+MNEDYD
Sbjct: 25  LHNFPVVSFSDSGQQKRDPTIKPRDGIPQKKTRSFKE--DKKESKKLQWYFSNQMNEDYD 84

Query: 84  SRDLEFATAAASAAFAIRSQEETDLQYQKKKRGSLETPLTKVKTRKDG-------ITRRP 143
           S+D+EFATA ASAAFAIRS+EETDLQYQKKKR S+E  +TKVK+RKD        ITR  
Sbjct: 85  SKDIEFATAVASAAFAIRSKEETDLQYQKKKRESMEASITKVKSRKDDTAAFAPRITRPL 144

Query: 144 SNKE--TTNPGQSSIKKPTGHEK-DSITGMPL--SPPRRSLVETRADVWERHNMEKIRKR 203
           S KE  TTNPGQSSIK+P   EK +S+TG+P   +PPRRSL+ +RADVWER+ ME+I KR
Sbjct: 145 SKKETQTTNPGQSSIKRPMEQEKRESVTGIPKPPAPPRRSLIPSRADVWERNKMERISKR 204

Query: 204 YEKIKLSIHAWENKKKMHAKLHKEKKMAELENKKALFLQNYQDNIVRIDQITGGARTQLE 263
           Y KIK SI AWEN+KKMHAKLH EKK  ELE KKALF Q Y +NI RIDQI GGAR  LE
Sbjct: 205 YLKIKASILAWENEKKMHAKLHMEKKKDELERKKALFQQYYHENIARIDQIAGGARAHLE 264

Query: 264 QKRRREEKKARETANRIRSTGRLPVTCFCIQYH 285
           +KR+REEKKARETANRIRSTGRLPVTCFC QYH
Sbjct: 265 EKRKREEKKARETANRIRSTGRLPVTCFCFQYH 295

[Close]

BLAST of CmaCh13G010880 vs. ExPASy TrEMBL
Match: A0A6J1C6Y1 (uncharacterized protein At3g61260 OS=Momordica charantia OX=3673 GN=LOC111008969 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 4.2e-92
Identity = 193/263 (73.38%), Postives = 216/263 (82.13%), Query Frame = 0


Query: 30  LSFSDSGRHNKDASIKPRDGIPQQKTRSSKEGTDKKESKKLRWYFANEMNEDYDSRDLEF 89
           +SF DSG+H KDASIK RDGIPQ KTRS KE  DKK SK L+W+F+N+MNED+DSRD+EF
Sbjct: 10  VSFGDSGQHKKDASIKSRDGIPQPKTRSFKE--DKKGSKGLQWHFSNQMNEDHDSRDIEF 69

Query: 90  ATAAASAAFAIRSQEETDLQYQKKKRGSLETPLTKVKTRKD-------GITRRPSNKETT 149
           ATA ASAA AI S EETDLQ+QKK R SLETP+TKVK+ KD        +TRR SNKETT
Sbjct: 70  ATAVASAALAIHSLEETDLQHQKKIRESLETPMTKVKSIKDDTAAIPTSVTRRLSNKETT 129

Query: 150 NPGQSSIKKPTGHE-KDSITGMPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHA 209
           NPGQSSIKKP G E K+  TG+PL PPR++LV+TRADVWER  ME+IRKRY+K+K SI A
Sbjct: 130 NPGQSSIKKPMGQEKKEPGTGIPLPPPRQNLVQTRADVWERDKMERIRKRYQKMKSSILA 189

Query: 210 WENKKKMHAKLHKEKKMAELENKKALFLQNYQDNIVRIDQITGGARTQLEQKRRREEKKA 269
           WEN+KKMHAKL  EKK AELE KK LFLQ YQDNIVRIDQI GGAR QLE+KR+ EE KA
Sbjct: 190 WENEKKMHAKLQMEKKKAELERKKVLFLQYYQDNIVRIDQIAGGARAQLEEKRKNEEDKA 249

Query: 270 RETANRIRSTGRLPVTCFCIQYH 285
           RETANRIR TGRLPVTCFC QYH
Sbjct: 250 RETANRIRLTGRLPVTCFCFQYH 270

[Close]

BLAST of CmaCh13G010880 vs. NCBI nr
Match: XP_023000656.1 (uncharacterized protein LOC111495024 [Cucurbita maxima])

HSP 1 Score: 490.7 bits (1262), Expect = 8.3e-135
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 30  LSFSDSGRHNKDASIKPRDGIPQQKTRSSKEGTDKKESKKLRWYFANEMNEDYDSRDLEF 89
           LSFSDSGRHNKDASIKPRDGIPQQKTRSSKEGTDKKESKKLRWYFANEMNEDYDSRDLEF
Sbjct: 62  LSFSDSGRHNKDASIKPRDGIPQQKTRSSKEGTDKKESKKLRWYFANEMNEDYDSRDLEF 121

Query: 90  ATAAASAAFAIRSQEETDLQYQKKKRGSLETPLTKVKTRKDGITRRPSNKETTNPGQSSI 149
           ATAAASAAFAIRSQEETDLQYQKKKRGSLETPLTKVKTRKDGITRRPSNKETTNPGQSSI
Sbjct: 122 ATAAASAAFAIRSQEETDLQYQKKKRGSLETPLTKVKTRKDGITRRPSNKETTNPGQSSI 181

Query: 150 KKPTGHEKDSITGMPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMH 209
           KKPTGHEKDSITGMPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMH
Sbjct: 182 KKPTGHEKDSITGMPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMH 241

Query: 210 AKLHKEKKMAELENKKALFLQNYQDNIVRIDQITGGARTQLEQKRRREEKKARETANRIR 269
           AKLHKEKKMAELENKKALFLQNYQDNIVRIDQITGGARTQLEQKRRREEKKARETANRIR
Sbjct: 242 AKLHKEKKMAELENKKALFLQNYQDNIVRIDQITGGARTQLEQKRRREEKKARETANRIR 301

Query: 270 STGRLPVTCFCIQYH 285
           STGRLPVTCFCIQYH
Sbjct: 302 STGRLPVTCFCIQYH 316

[Close]

BLAST of CmaCh13G010880 vs. NCBI nr
Match: XP_023520323.1 (uncharacterized protein LOC111783637 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 475.3 bits (1222), Expect = 3.6e-130
Identity = 248/255 (97.25%), Postives = 250/255 (98.04%), Query Frame = 0


Query: 30  LSFSDSGRHNKDASIKPRDGIPQQKTRSSKEGTDKKESKKLRWYFANEMNEDYDSRDLEF 89
           LS SDSGRHNKDASIKPRDGIPQQKTRSSKEGTDKKESKKLRWYFANEMNEDYDSRDLEF
Sbjct: 10  LSSSDSGRHNKDASIKPRDGIPQQKTRSSKEGTDKKESKKLRWYFANEMNEDYDSRDLEF 69

Query: 90  ATAAASAAFAIRSQEETDLQYQKKKRGSLETPLTKVKTRKDGITRRPSNKETTNPGQSSI 149
           ATAAASAAFAIRSQEETDLQYQKKKRGSLETPLTKVKTRKD ITRRPSNKETTNPGQSSI
Sbjct: 70  ATAAASAAFAIRSQEETDLQYQKKKRGSLETPLTKVKTRKDDITRRPSNKETTNPGQSSI 129

Query: 150 KKPTGHEKDSITGMPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMH 209
           KKPTGHEKDSITG+PL PPRRSLVETRADVWERHNMEKIRKRYEK+KLSIHAWENKKKMH
Sbjct: 130 KKPTGHEKDSITGIPLPPPRRSLVETRADVWERHNMEKIRKRYEKMKLSIHAWENKKKMH 189

Query: 210 AKLHKEKKMAELENKKALFLQNYQDNIVRIDQITGGARTQLEQKRRREEKKARETANRIR 269
           AKLHKEKKMAELENKKALFLQNYQDNIVRIDQIT GAR QLEQKRRREEKKARETANRIR
Sbjct: 190 AKLHKEKKMAELENKKALFLQNYQDNIVRIDQITEGARAQLEQKRRREEKKARETANRIR 249

Query: 270 STGRLPVTCFCIQYH 285
           STGRLPVTCFCIQYH
Sbjct: 250 STGRLPVTCFCIQYH 264

[Close]

BLAST of CmaCh13G010880 vs. NCBI nr
Match: KAG7020010.1 (hypothetical protein SDJN02_18978, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 475.3 bits (1222), Expect = 3.6e-130
Identity = 251/266 (94.36%), Postives = 254/266 (95.49%), Query Frame = 0


Query: 19  EGISSLRNFPALSFSDSGRHNKDASIKPRDGIPQQKTRSSKEGTDKKESKKLRWYFANEM 78
           + IS  R  P  SFSDSGRHNKDASIKPRDGIPQQKTRSSKEGT KKESKKLRWYFANEM
Sbjct: 35  DAISGKREKP--SFSDSGRHNKDASIKPRDGIPQQKTRSSKEGTHKKESKKLRWYFANEM 94

Query: 79  NEDYDSRDLEFATAAASAAFAIRSQEETDLQYQKKKRGSLETPLTKVKTRKDGITRRPSN 138
           NEDYDSRDLEFATAAASAAFAIRSQEETDLQYQKKK GSLETPLTKVKTRKD ITRRPSN
Sbjct: 95  NEDYDSRDLEFATAAASAAFAIRSQEETDLQYQKKKSGSLETPLTKVKTRKDDITRRPSN 154

Query: 139 KETTNPGQSSIKKPTGHEKDSITGMPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLS 198
           KETTNPGQSSIKKPTGHEKDS+TG+PLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLS
Sbjct: 155 KETTNPGQSSIKKPTGHEKDSMTGIPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLS 214

Query: 199 IHAWENKKKMHAKLHKEKKMAELENKKALFLQNYQDNIVRIDQITGGARTQLEQKRRREE 258
           IHAWENKKKMHAKLHKEKKMAELENKKALFLQNYQDNIVRIDQIT GAR QLEQKRRREE
Sbjct: 215 IHAWENKKKMHAKLHKEKKMAELENKKALFLQNYQDNIVRIDQITEGARAQLEQKRRREE 274

Query: 259 KKARETANRIRSTGRLPVTCFCIQYH 285
           KKARETANRIRSTGRLPVTCFCIQYH
Sbjct: 275 KKARETANRIRSTGRLPVTCFCIQYH 298

[Close]

BLAST of CmaCh13G010880 vs. NCBI nr
Match: KAG6584421.1 (SNAP25-likeous protein SNAP33, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 473.8 bits (1218), Expect = 1.1e-129
Identity = 247/254 (97.24%), Postives = 249/254 (98.03%), Query Frame = 0


Query: 31  SFSDSGRHNKDASIKPRDGIPQQKTRSSKEGTDKKESKKLRWYFANEMNEDYDSRDLEFA 90
           SFSDSGRHNKDASIKPRDGIPQQKTRSSKEGT KKESKKLRWYFANEMNEDYDSRDLEFA
Sbjct: 379 SFSDSGRHNKDASIKPRDGIPQQKTRSSKEGTHKKESKKLRWYFANEMNEDYDSRDLEFA 438

Query: 91  TAAASAAFAIRSQEETDLQYQKKKRGSLETPLTKVKTRKDGITRRPSNKETTNPGQSSIK 150
           TAAASAAFAIRSQEETDLQYQKKK GSLETPLTKVKTRKD ITRRPSNKETTNPGQSSIK
Sbjct: 439 TAAASAAFAIRSQEETDLQYQKKKSGSLETPLTKVKTRKDDITRRPSNKETTNPGQSSIK 498

Query: 151 KPTGHEKDSITGMPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMHA 210
           KPTGHEKDS+TG+PLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMHA
Sbjct: 499 KPTGHEKDSMTGIPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMHA 558

Query: 211 KLHKEKKMAELENKKALFLQNYQDNIVRIDQITGGARTQLEQKRRREEKKARETANRIRS 270
           KLHKEKKMAELENKKALFLQNYQDNIVRIDQIT GAR QLEQKRRREEKKARETANRIRS
Sbjct: 559 KLHKEKKMAELENKKALFLQNYQDNIVRIDQITEGARAQLEQKRRREEKKARETANRIRS 618

Query: 271 TGRLPVTCFCIQYH 285
           TGRLPVTCFCIQYH
Sbjct: 619 TGRLPVTCFCIQYH 632

[Close]

BLAST of CmaCh13G010880 vs. NCBI nr
Match: XP_022923783.1 (uncharacterized protein LOC111431392 [Cucurbita moschata])

HSP 1 Score: 468.8 bits (1205), Expect = 3.4e-128
Identity = 245/254 (96.46%), Postives = 247/254 (97.24%), Query Frame = 0


Query: 31  SFSDSGRHNKDASIKPRDGIPQQKTRSSKEGTDKKESKKLRWYFANEMNEDYDSRDLEFA 90
           SFSDSGRHNKDASIKPRDGIPQQKTRSSKEGT KKESKKLRWYFANEMNEDYDSRDLEFA
Sbjct: 11  SFSDSGRHNKDASIKPRDGIPQQKTRSSKEGTHKKESKKLRWYFANEMNEDYDSRDLEFA 70

Query: 91  TAAASAAFAIRSQEETDLQYQKKKRGSLETPLTKVKTRKDGITRRPSNKETTNPGQSSIK 150
           TAAASAAFAIRSQEETDLQYQK K GSLETPLTKVKTRKD ITRRPSNKETTNPGQSSIK
Sbjct: 71  TAAASAAFAIRSQEETDLQYQKNKSGSLETPLTKVKTRKDDITRRPSNKETTNPGQSSIK 130

Query: 151 KPTGHEKDSITGMPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMHA 210
           KPTGHEKDS+TG+PLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMHA
Sbjct: 131 KPTGHEKDSMTGIPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMHA 190

Query: 211 KLHKEKKMAELENKKALFLQNYQDNIVRIDQITGGARTQLEQKRRREEKKARETANRIRS 270
           KLHKEKKMAELENKKALFLQNYQDNIVRIDQIT GAR QLEQKR REEKKARETANRIRS
Sbjct: 191 KLHKEKKMAELENKKALFLQNYQDNIVRIDQITEGARAQLEQKRIREEKKARETANRIRS 250

Query: 271 TGRLPVTCFCIQYH 285
           TGRLPVTCFCIQYH
Sbjct: 251 TGRLPVTCFCIQYH 264

[Close]

BLAST of CmaCh13G010880 vs. TAIR 10
Match: AT5G61280.1 (Remorin family protein )

HSP 1 Score: 106.3 bits (264), Expect = 4.1e-23
Identity = 75/226 (33.19%), Postives = 116/226 (51.33%), Query Frame = 0


Query: 72  WYFANEMNEDYDSRDLEFATAAASAAFAIRSQEETDLQYQKK----------KRGSLETP 131
           WY   E N+ Y+ ++ E A + A AAF IRS EE D Q  K+          K+ +L  P
Sbjct: 45  WY---EKNDYYNEKESELAVSVAVAAFVIRSMEEADKQKSKRIREEIKRSRTKKSNLVIP 104

Query: 132 LTKVKTRKDGITRRPSNKETTNPGQSSIKK-----PTGHEKDSITGMPLSPPRRSLVETR 191
            T+VK      T      +    G+ S +K     P+ + +    G        +   ++
Sbjct: 105 NTQVKRLSKSYT------QEVKIGEESFRKKLLEYPSENRRPQEIGSSSGTSGLASASSK 164

Query: 192 ADVWERHNMEKIRKRYEKIKLSIHAWENKKKMHAKLHKEKKMAELENKKALFLQNYQDNI 251
           AD WE+  ++KIR RYEK+K  I  WEN++K+ A L  EK+ +ELE +K +  Q+Y+  +
Sbjct: 165 ADSWEKSQIKKIRLRYEKMKADIVGWENERKLAATLLMEKRKSELEKRKGINNQHYKSKL 224

Query: 252 VRIDQITGGARTQLEQKRRREEKKARETANRIRSTGRLPVTCFCIQ 283
            RI  I  GA+ QLE+KRR +E +      ++  TG++P   FC +
Sbjct: 225 ARIQLIADGAKKQLEEKRRSKEAQVHGKVKKMSRTGKVPNNYFCFR 261

[Close]

BLAST of CmaCh13G010880 vs. TAIR 10
Match: AT1G13920.1 (Remorin family protein )

HSP 1 Score: 71.2 bits (173), Expect = 1.5e-12
Identity = 42/108 (38.89%), Postives = 65/108 (60.19%), Query Frame = 0


Query: 174 ETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMHAKLHKE-KKMAELENKKALFLQNY 233
           ++ AD WE+  + KI+ RYEK+   I  WE KK+  A+   +  + +ELE ++   LQ +
Sbjct: 237 DSTADAWEKAELSKIKARYEKLNRKIDLWEAKKREKARRKLDISEQSELEQRRKRGLQRF 296

Query: 234 QDNIVRIDQITGGARTQLEQKRRREEKKARETANRIRSTGRLPVTCFC 281
           +++   I+QI  GAR Q E+ R+ +E K +E A  IRSTG+LP    C
Sbjct: 297 REDTEYIEQIAAGARAQAEKDRQSKEFKVKEKAGVIRSTGKLPGNACC 344

[Close]

BLAST of CmaCh13G010880 vs. TAIR 10
Match: AT1G69325.1 (Remorin family protein )

HSP 1 Score: 63.5 bits (153), Expect = 3.1e-10
Identity = 38/101 (37.62%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 178 DVWERHNMEKIRKRYEKIKLSIHAWENKKKMHAKLHKEKKMAELENKKALFLQNYQDNIV 237
           D W+   + K RK+YEK+   I +WE+KK+  AK    +    +E  K    Q ++D   
Sbjct: 19  DQWKETEISKSRKKYEKLSEKIVSWEDKKRKKAKRKLHRTERSVEKTKLKATQRFRDENE 78

Query: 238 RIDQITGGARTQLEQKRRREEKKARETANRIRSTGRLPVTC 279
           RI+ I   AR    + R +EE K +E AN +R+TGR P TC
Sbjct: 79  RIEIIVASARAHAYESRIKEELKVKEKANLMRTTGRKPSTC 119

[Close]

BLAST of CmaCh13G010880 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 53.9 bits (128), Expect = 2.4e-07
Identity = 35/102 (34.31%), Postives = 51/102 (50.00%), Query Frame = 0


Query: 180 WERHNMEKIRKRYEKIKLSIHAWENKKKMHAKLHKEKKMAELENKKALFLQNYQDNIVRI 239
           WE     K   + EK    +HAWEN KK   +   +K   +LE KKA + +  ++ +  I
Sbjct: 110 WEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAI 169

Query: 240 DQITGGARTQLEQKRRREEKKARETANRIRSTGRLP-VTCFC 281
            +     R  +E KR  +  KA ETA + R+TG +P  TC C
Sbjct: 170 HKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKATCGC 211

[Close]

BLAST of CmaCh13G010880 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.6e-06
Identity = 40/130 (30.77%), Postives = 62/130 (47.69%), Query Frame = 0


Query: 150 KKPTGHEKDSITGMPLSPPRRSLVETRADVWERHNMEKIRKRYEKIKLSIHAWENKKKMH 209
           KK     +D++     +  R SL++     WE     K+  + EK   SI +WEN KK  
Sbjct: 74  KKEGSVNRDAVLARVETEKRMSLIK----AWEEAEKCKVENKAEKKLSSIGSWENNKKAA 133

Query: 210 AKLHKEKKMAELENKKALFLQNYQDNIVRIDQITGGARTQLEQKRRREEKKARETANRIR 269
            +   +K   +LE KKA +++  ++ I +I +     R  +E KR  E  KA E A + R
Sbjct: 134 VEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYR 193

Query: 270 STGRLPVTCF 280
           +TG  P   F
Sbjct: 194 ATGTAPKKLF 199

The following BLAST results are available for this feature:

BLAST of CmaCh13G010880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2D8	3.4e-06	34.31	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
Q9FFA5	2.2e-05	30.77	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]

BLAST of CmaCh13G010880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KGF5	4.0e-135	100.00	uncharacterized protein LOC111495024 OS=Cucurbita maxima OX=3661 GN=LOC111495024...	[more]
A0A6J1EAK4	1.6e-128	96.46	uncharacterized protein LOC111431392 OS=Cucurbita moschata OX=3662 GN=LOC1114313...	[more]
A0A6J1KC68	4.5e-94	72.90	uncharacterized protein LOC111492995 OS=Cucurbita maxima OX=3661 GN=LOC111492995...	[more]
A0A5D3BIU6	2.2e-93	71.79	Remorin isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G0...	[more]
A0A6J1C6Y1	4.2e-92	73.38	uncharacterized protein At3g61260 OS=Momordica charantia OX=3673 GN=LOC111008969...	[more]

BLAST of CmaCh13G010880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023000656.1	8.3e-135	100.00	uncharacterized protein LOC111495024 [Cucurbita maxima]	[more]
XP_023520323.1	3.6e-130	97.25	uncharacterized protein LOC111783637 [Cucurbita pepo subsp. pepo]	[more]
KAG7020010.1	3.6e-130	94.36	hypothetical protein SDJN02_18978, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6584421.1	1.1e-129	97.24	SNAP25-likeous protein SNAP33, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022923783.1	3.4e-128	96.46	uncharacterized protein LOC111431392 [Cucurbita moschata]	[more]

BLAST of CmaCh13G010880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61280.1	4.1e-23	33.19	Remorin family protein	[more]
AT1G13920.1	1.5e-12	38.89	Remorin family protein	[more]
AT1G69325.1	3.1e-10	37.62	Remorin family protein	[more]
AT3G61260.1	2.4e-07	34.31	Remorin family protein	[more]
AT5G23750.1	1.6e-06	30.77	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 185..205
None	No IPR available	COILS	Coil	Coil	coord: 247..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..136
None	No IPR available	PANTHER	PTHR31471:SF5	GB\|AAD39278.1	coord: 45..280
None	No IPR available	PANTHER	PTHR31471	OS02G0116800 PROTEIN	coord: 45..280
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 173..276 e-value: 1.4E-23 score: 82.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G010880.1	CmaCh13G010880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress