CmaCh02G016860.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh02G016860.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr02: 9492542 .. 9493561 (-)
Sequence length240
RNA-Seq ExpressionCmaCh02G016860.1
SyntenyCmaCh02G016860.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCAGATTGAAGCAGTAATGGCCTTTTGTCTTTGGGCATTTGGCTTTTGCTTTGCTTTGCTTTGCTTTGTCCTCTCCTTCACCTTCACAACTAAAGCTAACGCTCAGTCTAGCGGTGACATAGATTACTCTTTCCTATTATTGGGTTCTCTCCATCTCTCCCTTCCCTCTCTCGACATTTTTAATGAATAGTTTCTATATTTCCGAGCTTACGAGAAAGTATCTAGTTAGCAAGAGTTAGCTCAAACTCGAGCTATAGAGAAAAATATTAGGTTAGAGAGAGTCGAGACCAAATTTGAAGTCCTGGTTAAGTGAAACTGGAGATATACAGCAAAGAACAGAGCATTCTCTATCTTCAGATGGACTTCCCCTACCACTACTCGACAAATTTGAATATCTACGTGACCAAATTTTCCTGTTCAATATCCTACTTATCTGACATGACATGAATCACCGAGCCTGCATTCAGGAATAGTAATCTTTGAAAAATGCATTCGGAGTTAATGATAGAGAAAGAAGTTTAAGACCACCTCATACTATAACCAACCTCATAAATTTTACATTAGAAGCTATATTTATTTTCGCCCCATAACTAAATACTTTTGTTGGTAAATAGCATATTTGATACAGTATTCATAATTTTTATATTTAATTATTTAAAACAAAATAGACTTACAATTATATTCTTAACCCAATTATTGTAGTCTGCGTGACTCTATAATGAAATTATTTTATGAAGTCAATAATAGAATTTGTTGTAACCAATTTAAATATAATTCATAATTCAAGAACGTATGTTTATACGTGAGGCATGAAAATTTGGAACTGGAGCCGGTAAAATACGATAATCTTGAGCTTAGTTGAGGAGTCTTTAAATATAATATAATTACCGCAGGAGCACATTTGGAAATTCGGAACGCCTTCCGCCAGAACACAACGGAATCCGAGTTCAATTCCCTAGCCAACAATGATCCATCATCATCTTCCTGTCATCTTCTTCTGCTTTCAATTCCCTAA

mRNA sequence

ATGCAGCAGATTGAAGCAGTAATGGCCTTTTGTCTTTGGGCATTTGGCTTTTGCTTTGCTTTGCTTTGCTTTGTCCTCTCCTTCACCTTCACAACTAAAGCTAACGCTCAGTCTAGCGGAGCACATTTGGAAATTCGGAACGCCTTCCGCCAGAACACAACGGAATCCGAGTTCAATTCCCTAGCCAACAATGATCCATCATCATCTTCCTGTCATCTTCTTCTGCTTTCAATTCCCTAA

Coding sequence (CDS)

ATGCAGCAGATTGAAGCAGTAATGGCCTTTTGTCTTTGGGCATTTGGCTTTTGCTTTGCTTTGCTTTGCTTTGTCCTCTCCTTCACCTTCACAACTAAAGCTAACGCTCAGTCTAGCGGAGCACATTTGGAAATTCGGAACGCCTTCCGCCAGAACACAACGGAATCCGAGTTCAATTCCCTAGCCAACAATGATCCATCATCATCTTCCTGTCATCTTCTTCTGCTTTCAATTCCCTAA

Protein sequence

MQQIEAVMAFCLWAFGFCFALLCFVLSFTFTTKANAQSSGAHLEIRNAFRQNTTESEFNSLANNDPSSSSCHLLLLSIP
Homology
The following BLAST results are available for this feature:
BLAST of CmaCh02G016860.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh02G016860.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh02G016860CmaCh02G016860gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh02G016860.1:exon:3007CmaCh02G016860.1:exon:3007exon
CmaCh02G016860.1:exon:3006CmaCh02G016860.1:exon:3006exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh02G016860.1:cdsCmaCh02G016860.1:cds_2CDS
CmaCh02G016860.1:cdsCmaCh02G016860.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh02G016860.1CmaCh02G016860.1-proteinpolypeptide