CmoCh10G003170 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G003170
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	suppressor protein SRP40 isoform X1
Location	Cmo_Chr10: 1421901 .. 1422977 (-)
RNA-Seq Expression	CmoCh10G003170
Synteny	CmoCh10G003170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCTGGGCGAAGGATCGAGGCCGATGAATCTAAAACACAGTCTATCAGCAATTCGGGCGAAGTGGGTCTGTCTATTCCAAGAAGTCAATTACTCACTTCCTTATCCTCGGCATCTTATTCCTCCACTGACAGCTCCTTTGAATTGATTGTAACTGGGAACGGCGATTTCATTTGTCGTACAAGTGATTCTTTGGATAACAATGACTTTCAGGTTATTAGTGGTGATGAATCTTCCCTGCATGATCATTTGATTGAACACCCAAGGCCTGGAAAGTACATAGATGGCAATGCTATGGAGCCAGATTTGAATAAACCTGGTGAAGCCGGCGATCTTGGAAGTAGAAAAAATCTGCAAACTTATTCTTCCACTTCCTCGTCCTTCGAATCTGAATCTAAACATAAAATTAAGCTTAAACAGGGAAGAGATGCTACAGATAACTTATTGTCAAACAATCCCAGCTCCCCAAGCATGGAGAAGTTCAACAGATTTGTTGTAGATTTCAGTGATGAAGATGTTACCATCAGCTCTATGCCTAGCAACCGACGAACACCAGTAACTCCAAAGCATAGGATAGACTTGGGCTCAGGCAGCGAGGCAGCTATTAAATACCCTCCAATTCAAGTCATGGATAGAACTGATGATCCTACTTCCATTTCATATAGAATTCCATCTCGGGTCTTTTCTAGATCTAAATCTACAGCGCCTATGGAATGGAGTGTTGCTTCAAATGAATCATTGTTCAGCATTCAGATGGGAAACATGAGTTTTACCAGAGAACAATTGGGTTGGCTGGGAAAATCAGGGGAGCTATATAGGCCTGGTGAATCAGCCCTTGACGTATCCCAGCATTTGGCTATGAGGCCTTCAGACTATGGATTGATAGGCACCCATCCCGACGGTGATATGGCAGTAACTGAAGCACGAGCTGCGGAAACAATGAGGGAGGTTATAAGAGAAAGCTCAGAAAACCAACGCAAGACGGGTTCCACTCTAACAGAGTCGTCTTCTCAGTCAGCCAGCATTTCTCCTCAGTCAGAAAGCAGCACAAAATCTTTCCAGTTTCCAATGTAA

mRNA sequence

ATGGAATCTGGGCGAAGGATCGAGGCCGATGAATCTAAAACACAGTCTATCAGCAATTCGGGCGAAGTGGGTCTGTCTATTCCAAGAAGTCAATTACTCACTTCCTTATCCTCGGCATCTTATTCCTCCACTGACAGCTCCTTTGAATTGATTGTAACTGGGAACGGCGATTTCATTTGTCGTACAAGTGATTCTTTGGATAACAATGACTTTCAGGTTATTAGTGGTGATGAATCTTCCCTGCATGATCATTTGATTGAACACCCAAGGCCTGGAAAGTACATAGATGGCAATGCTATGGAGCCAGATTTGAATAAACCTGGTGAAGCCGGCGATCTTGGAAGTAGAAAAAATCTGCAAACTTATTCTTCCACTTCCTCGTCCTTCGAATCTGAATCTAAACATAAAATTAAGCTTAAACAGGGAAGAGATGCTACAGATAACTTATTGTCAAACAATCCCAGCTCCCCAAGCATGGAGAAGTTCAACAGATTTGTTGTAGATTTCAGTGATGAAGATGTTACCATCAGCTCTATGCCTAGCAACCGACGAACACCAGTAACTCCAAAGCATAGGATAGACTTGGGCTCAGGCAGCGAGGCAGCTATTAAATACCCTCCAATTCAAGTCATGGATAGAACTGATGATCCTACTTCCATTTCATATAGAATTCCATCTCGGGTCTTTTCTAGATCTAAATCTACAGCGCCTATGGAATGGAGTGTTGCTTCAAATGAATCATTGTTCAGCATTCAGATGGGAAACATGAGTTTTACCAGAGAACAATTGGGTTGGCTGGGAAAATCAGGGGAGCTATATAGGCCTGGTGAATCAGCCCTTGACGTATCCCAGCATTTGGCTATGAGGCCTTCAGACTATGGATTGATAGGCACCCATCCCGACGGTGATATGGCAGTAACTGAAGCACGAGCTGCGGAAACAATGAGGGAGGTTATAAGAGAAAGCTCAGAAAACCAACGCAAGACGGGTTCCACTCTAACAGAGTCGTCTTCTCAGTCAGCCAGCATTTCTCCTCAGTCAGAAAGCAGCACAAAATCTTTCCAGTTTCCAATGTAA

Coding sequence (CDS)

ATGGAATCTGGGCGAAGGATCGAGGCCGATGAATCTAAAACACAGTCTATCAGCAATTCGGGCGAAGTGGGTCTGTCTATTCCAAGAAGTCAATTACTCACTTCCTTATCCTCGGCATCTTATTCCTCCACTGACAGCTCCTTTGAATTGATTGTAACTGGGAACGGCGATTTCATTTGTCGTACAAGTGATTCTTTGGATAACAATGACTTTCAGGTTATTAGTGGTGATGAATCTTCCCTGCATGATCATTTGATTGAACACCCAAGGCCTGGAAAGTACATAGATGGCAATGCTATGGAGCCAGATTTGAATAAACCTGGTGAAGCCGGCGATCTTGGAAGTAGAAAAAATCTGCAAACTTATTCTTCCACTTCCTCGTCCTTCGAATCTGAATCTAAACATAAAATTAAGCTTAAACAGGGAAGAGATGCTACAGATAACTTATTGTCAAACAATCCCAGCTCCCCAAGCATGGAGAAGTTCAACAGATTTGTTGTAGATTTCAGTGATGAAGATGTTACCATCAGCTCTATGCCTAGCAACCGACGAACACCAGTAACTCCAAAGCATAGGATAGACTTGGGCTCAGGCAGCGAGGCAGCTATTAAATACCCTCCAATTCAAGTCATGGATAGAACTGATGATCCTACTTCCATTTCATATAGAATTCCATCTCGGGTCTTTTCTAGATCTAAATCTACAGCGCCTATGGAATGGAGTGTTGCTTCAAATGAATCATTGTTCAGCATTCAGATGGGAAACATGAGTTTTACCAGAGAACAATTGGGTTGGCTGGGAAAATCAGGGGAGCTATATAGGCCTGGTGAATCAGCCCTTGACGTATCCCAGCATTTGGCTATGAGGCCTTCAGACTATGGATTGATAGGCACCCATCCCGACGGTGATATGGCAGTAACTGAAGCACGAGCTGCGGAAACAATGAGGGAGGTTATAAGAGAAAGCTCAGAAAACCAACGCAAGACGGGTTCCACTCTAACAGAGTCGTCTTCTCAGTCAGCCAGCATTTCTCCTCAGTCAGAAAGCAGCACAAAATCTTTCCAGTTTCCAATGTAA

Protein sequence

MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFICRTSDSLDNNDFQVISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQTYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMPSNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEWSVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHPDGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFPM

Homology

[Close]

BLAST of CmoCh10G003170 vs. ExPASy TrEMBL
Match: A0A6J1E2T8 (uncharacterized protein LOC111430064 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430064 PE=4 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 1.2e-192
Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 0


Query: 1   MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFIC 60
           MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFIC
Sbjct: 1   MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFIC 60

Query: 61  RTSDSLDNNDFQVISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQ 120
           RTSDSLDNNDFQVISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQ
Sbjct: 61  RTSDSLDNNDFQVISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQ 120

Query: 121 TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMP 180
           TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMP
Sbjct: 121 TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMP 180

Query: 181 SNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW 240
           SNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW
Sbjct: 181 SNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW 240

Query: 241 SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP 300
           SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP
Sbjct: 241 SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP 300

Query: 301 DGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFPM 359
           DGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFPM
Sbjct: 301 DGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFPM 358

[Close]

BLAST of CmoCh10G003170 vs. ExPASy TrEMBL
Match: A0A6J1E792 (uncharacterized protein LOC111430064 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430064 PE=4 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 3.5e-192
Identity = 357/358 (99.72%), Postives = 358/358 (100.00%), Query Frame = 0


Query: 1   MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFIC 60
           MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFIC
Sbjct: 1   MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFIC 60

Query: 61  RTSDSLDNNDFQVISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQ 120
           RTSDSLDNNDFQVISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQ
Sbjct: 61  RTSDSLDNNDFQVISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQ 120

Query: 121 TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMP 180
           TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMP
Sbjct: 121 TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMP 180

Query: 181 SNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW 240
           SNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW
Sbjct: 181 SNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW 240

Query: 241 SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP 300
           SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP
Sbjct: 241 SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP 300

Query: 301 DGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFPM 359
           DGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFP+
Sbjct: 301 DGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFPI 358

[Close]

BLAST of CmoCh10G003170 vs. ExPASy TrEMBL
Match: A0A6J1JGT8 (uncharacterized protein LOC111484970 OS=Cucurbita maxima OX=3661 GN=LOC111484970 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 6.2e-133
Identity = 253/259 (97.68%), Postives = 255/259 (98.46%), Query Frame = 0


Query: 100 MEPDLNKPGEAGDLGSRKNLQTYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSM 159
           MEPDLNKPGEAGDLGSRKNLQTYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSM
Sbjct: 1   MEPDLNKPGEAGDLGSRKNLQTYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSM 60

Query: 160 EKFNRFVVDFSDEDVTISSMPSNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTS 219
           EKFNRFVVDFSDEDV ISSM SNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTS
Sbjct: 61  EKFNRFVVDFSDEDVPISSMHSNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTS 120

Query: 220 ISYRIPSRVFSRSKSTAPMEWSVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESA 279
           ISYRIPSRVFSR+KSTAPMEWS ASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESA
Sbjct: 121 ISYRIPSRVFSRTKSTAPMEWSGASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESA 180

Query: 280 LDVSQHLAMRPSDYGLIGTHPDGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQ 339
           LDVSQHLAMRPSDYGLIGTHPDGDMA TEARAAETMREVIRESSENQRKTGSTLTESSSQ
Sbjct: 181 LDVSQHLAMRPSDYGLIGTHPDGDMAATEARAAETMREVIRESSENQRKTGSTLTESSSQ 240

Query: 340 SASISPQSESSTKSFQFPM 359
           SASISPQSESSTKSFQFP+
Sbjct: 241 SASISPQSESSTKSFQFPI 259

[Close]

BLAST of CmoCh10G003170 vs. ExPASy TrEMBL
Match: A0A1S3BVA3 (uncharacterized protein LOC103494046 OS=Cucumis melo OX=3656 GN=LOC103494046 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 6.9e-108
Identity = 240/403 (59.55%), Postives = 280/403 (69.48%), Query Frame = 0


Query: 1   MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFIC 60
           MES ++IE  ES T SIS++G V LSI  ++L +S SSAS SS++SSFELIVTG    I 
Sbjct: 1   MESRQKIEDIESITHSISSTGGVDLSISSNKLASSSSSASDSSSESSFELIVTGLDGSIG 60

Query: 61  RTSDSLDNNDFQVISGD---------------------------------------ESSL 120
            TSDSL+ ++   +  D                                       ESSL
Sbjct: 61  VTSDSLEKDELHAVGSDSEFVFISSDDVGTHSPMADPPCTAKIPSQSLSRSSSSASESSL 120

Query: 121 HDHLIEHPRPGKYIDGNAMEPDLNKP------GEAGDLGSRKNLQTYSSTSSSFESESKH 180
           H H+IE P+P KY D N MEPDL K       GE  ++ SRK++QT SSTSSS  SES+ 
Sbjct: 121 HGHVIELPKPEKYEDTNGMEPDLKKTPSGLEHGETNNVESRKSIQTCSSTSSSSSSESES 180

Query: 181 KIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMPSNRRTPVTPKHRIDL 240
           K +L++G D  DNLLS NPSSPS+EK NR V DFSD+DV +    SN ++  TP HR+D 
Sbjct: 181 KPELQKGGDVADNLLSKNPSSPSVEKDNRLVTDFSDDDVPV----SNEQSAATPTHRVDS 240

Query: 241 GSGSEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEWSVASNESLFSIQMGN 300
            SGSE   +YPP Q+MDR DDPTS +YRIPSRVFSR+KSTAPMEWSVASNESLFSIQMGN
Sbjct: 241 SSGSETPTQYPPTQMMDRVDDPTSPAYRIPSRVFSRTKSTAPMEWSVASNESLFSIQMGN 300

Query: 301 MSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHPDGDMAVTEARAAETM 359
           MSFTREQL WLGKSGEL RPGES +D+SQHLAM+ SD GL    P+GD+A TEARAAETM
Sbjct: 301 MSFTREQLCWLGKSGELCRPGESTIDMSQHLAMKTSDCGLKSKSPNGDLAATEARAAETM 360

[Close]

BLAST of CmoCh10G003170 vs. ExPASy TrEMBL
Match: A0A5A7UV09 (Putative serine-rich protein C215.13-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003000 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 1.0e-106
Identity = 237/399 (59.40%), Postives = 277/399 (69.42%), Query Frame = 0


Query: 5   RRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFICRTSD 64
           ++IE  ES T SIS++G V LSI  ++L +S SSAS SS++SSFELIVTG    I  TSD
Sbjct: 87  QKIEDIESITHSISSTGGVDLSISSNKLASSSSSASDSSSESSFELIVTGLDGSIGVTSD 146

Query: 65  SLDNNDFQVISGD---------------------------------------ESSLHDHL 124
           SL+ ++   +  D                                       ESSLH H+
Sbjct: 147 SLEKDELHAVGSDSEFVFISSDDVGTHSPMADPPCTAKIPSQSLSRSSSSASESSLHGHV 206

Query: 125 IEHPRPGKYIDGNAMEPDLNKP------GEAGDLGSRKNLQTYSSTSSSFESESKHKIKL 184
           IE P+P KY D N MEPDL K       GE  ++ SRK++QT SSTSSS  SES+ K +L
Sbjct: 207 IELPKPEKYEDTNGMEPDLKKTPSGLEHGETNNVESRKSIQTCSSTSSSSSSESESKPEL 266

Query: 185 KQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMPSNRRTPVTPKHRIDLGSGS 244
           ++G D  DNLLS NPSSPS+EK NR V DFSD+DV +    SN ++  TP HR+D  SGS
Sbjct: 267 QKGGDVADNLLSKNPSSPSVEKDNRLVTDFSDDDVPV----SNEQSAATPTHRVDSSSGS 326

Query: 245 EAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEWSVASNESLFSIQMGNMSFT 304
           E   +YPP Q+MDR DDPTS +YRIPSRVFSR+KSTAPMEWSVASNESLFSIQMGNMSFT
Sbjct: 327 ETPTQYPPTQMMDRVDDPTSPAYRIPSRVFSRTKSTAPMEWSVASNESLFSIQMGNMSFT 386

Query: 305 REQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHPDGDMAVTEARAAETMREVI 359
           REQL WLGKSGEL RPGES +D+SQHLAM+ SD GL    P+GD+A TEARAAETMREVI
Sbjct: 387 REQLCWLGKSGELCRPGESTIDMSQHLAMKTSDCGLKSKSPNGDLAATEARAAETMREVI 446

[Close]

BLAST of CmoCh10G003170 vs. NCBI nr
Match: XP_022921966.1 (uncharacterized protein LOC111430064 isoform X2 [Cucurbita moschata])

HSP 1 Score: 682.2 bits (1759), Expect = 2.5e-192
Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 0


Query: 1   MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFIC 60
           MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFIC
Sbjct: 1   MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFIC 60

Query: 61  RTSDSLDNNDFQVISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQ 120
           RTSDSLDNNDFQVISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQ
Sbjct: 61  RTSDSLDNNDFQVISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQ 120

Query: 121 TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMP 180
           TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMP
Sbjct: 121 TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMP 180

Query: 181 SNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW 240
           SNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW
Sbjct: 181 SNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW 240

Query: 241 SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP 300
           SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP
Sbjct: 241 SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP 300

Query: 301 DGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFPM 359
           DGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFPM
Sbjct: 301 DGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFPM 358

[Close]

BLAST of CmoCh10G003170 vs. NCBI nr
Match: XP_022921965.1 (uncharacterized protein LOC111430064 isoform X1 [Cucurbita moschata])

HSP 1 Score: 680.6 bits (1755), Expect = 7.2e-192
Identity = 357/358 (99.72%), Postives = 358/358 (100.00%), Query Frame = 0


Query: 1   MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFIC 60
           MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFIC
Sbjct: 1   MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFIC 60

Query: 61  RTSDSLDNNDFQVISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQ 120
           RTSDSLDNNDFQVISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQ
Sbjct: 61  RTSDSLDNNDFQVISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQ 120

Query: 121 TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMP 180
           TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMP
Sbjct: 121 TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMP 180

Query: 181 SNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW 240
           SNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW
Sbjct: 181 SNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW 240

Query: 241 SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP 300
           SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP
Sbjct: 241 SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP 300

Query: 301 DGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFPM 359
           DGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFP+
Sbjct: 301 DGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFPI 358

[Close]

BLAST of CmoCh10G003170 vs. NCBI nr
Match: KAG6589602.1 (hypothetical protein SDJN03_15025, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 670.2 bits (1728), Expect = 9.7e-189
Identity = 352/358 (98.32%), Postives = 354/358 (98.88%), Query Frame = 0


Query: 1   MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFIC 60
           MESGRRIEADESKTQSISNSGEVGLSIPRSQLLT LSS SYSSTDSSFELIVTGNGDFIC
Sbjct: 1   MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTCLSSTSYSSTDSSFELIVTGNGDFIC 60

Query: 61  RTSDSLDNNDFQVISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQ 120
           RTSDSLDNNDFQ ISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQ
Sbjct: 61  RTSDSLDNNDFQFISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQ 120

Query: 121 TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMP 180
           TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMP
Sbjct: 121 TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMP 180

Query: 181 SNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW 240
           S+RRTPVTPKHRIDLGSGSEAAIKYP IQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW
Sbjct: 181 SHRRTPVTPKHRIDLGSGSEAAIKYPSIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW 240

Query: 241 SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP 300
           SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP
Sbjct: 241 SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP 300

Query: 301 DGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFPM 359
           DGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFP+
Sbjct: 301 DGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFPI 358

[Close]

BLAST of CmoCh10G003170 vs. NCBI nr
Match: KAG7023293.1 (hypothetical protein SDJN02_14318, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 667.5 bits (1721), Expect = 6.3e-188
Identity = 350/358 (97.77%), Postives = 354/358 (98.88%), Query Frame = 0


Query: 1   MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFIC 60
           MESGRRIEADESKTQSISNSGEVGLSIPRSQLLT LSS SYSSTDSSFELIVTGNGDFIC
Sbjct: 1   MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTCLSSTSYSSTDSSFELIVTGNGDFIC 60

Query: 61  RTSDSLDNNDFQVISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQ 120
           RTSDS++NNDFQ ISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQ
Sbjct: 61  RTSDSVENNDFQFISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQ 120

Query: 121 TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMP 180
           TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMP
Sbjct: 121 TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMP 180

Query: 181 SNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW 240
           S+RRTPVTPKHRIDLGSGSEAAIKYP IQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW
Sbjct: 181 SHRRTPVTPKHRIDLGSGSEAAIKYPSIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW 240

Query: 241 SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP 300
           SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP
Sbjct: 241 SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP 300

Query: 301 DGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFPM 359
           DGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFP+
Sbjct: 301 DGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFPI 358

[Close]

BLAST of CmoCh10G003170 vs. NCBI nr
Match: XP_023516807.1 (uncharacterized protein LOC111780597 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 666.8 bits (1719), Expect = 1.1e-187
Identity = 351/358 (98.04%), Postives = 352/358 (98.32%), Query Frame = 0


Query: 1   MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFIC 60
           MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFIC
Sbjct: 1   MESGRRIEADESKTQSISNSGEVGLSIPRSQLLTSLSSASYSSTDSSFELIVTGNGDFIC 60

Query: 61  RTSDSLDNNDFQVISGDESSLHDHLIEHPRPGKYIDGNAMEPDLNKPGEAGDLGSRKNLQ 120
           RTSDSLDNN+FQ ISGDESSL DHLIEH RPGKY DGNAMEPDLNKPGEAGDLGSRKNLQ
Sbjct: 61  RTSDSLDNNEFQFISGDESSLRDHLIEHQRPGKYTDGNAMEPDLNKPGEAGDLGSRKNLQ 120

Query: 121 TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVTISSMP 180
           TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDV ISSMP
Sbjct: 121 TYSSTSSSFESESKHKIKLKQGRDATDNLLSNNPSSPSMEKFNRFVVDFSDEDVPISSMP 180

Query: 181 SNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW 240
           SNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW
Sbjct: 181 SNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEW 240

Query: 241 SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP 300
           SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP
Sbjct: 241 SVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHP 300

Query: 301 DGDMAVTEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFPM 359
           DGDMA TEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFPM
Sbjct: 301 DGDMAATEARAAETMREVIRESSENQRKTGSTLTESSSQSASISPQSESSTKSFQFPM 358

[Close]

BLAST of CmoCh10G003170 vs. TAIR 10
Match: AT2G03630.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 87 Blast hits to 87 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 82.0 bits (201), Expect = 1.0e-15
Identity = 50/92 (54.35%), Postives = 57/92 (61.96%), Query Frame = 0


Query: 199 SEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEWSVASNESLFSIQMGNMSF 258
           ++  I  PP+QVMDR ++      RIPS VF RSKS  P EWS  SNESLFSI +GN SF
Sbjct: 85  NDPEISSPPVQVMDRDNNGKYDPNRIPSSVFERSKSNVPAEWSCTSNESLFSIHLGNNSF 144

Query: 259 TREQLGWLGKSGELYRPGESALDVSQHLAMRP 291
           T    G L KSGELY+ GE  L  S  L M P
Sbjct: 145 TGYG-GDLMKSGELYKSGE-LLAYSPGLPMPP 174

[Close]

BLAST of CmoCh10G003170 vs. TAIR 10
Match: AT2G03630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits to 126 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). )

HSP 1 Score: 77.8 bits (190), Expect = 2.0e-14
Identity = 68/176 (38.64%), Postives = 90/176 (51.14%), Query Frame = 0


Query: 199 SEAAIKYPPIQVMDRTDDPTSISYRIPSRVFSRSKSTAPMEWSVASNESLFSIQMGNMSF 258
           ++  I  PP+QVMDR ++      RIPS VF RSKS  P EWS  SNESLFSI +GN SF
Sbjct: 85  NDPEISSPPVQVMDRDNNGKYDPNRIPSSVFERSKSNVPAEWSCTSNESLFSIHLGNNSF 144

Query: 259 TREQLGWLGKSGELYRPGESALDVSQHLAMRPSDYGLIGTHPDGDMAVTEARAAETMRE- 318
           T    G L KSGELY+ GE  L  S  L M P    + G+ P     V E +  E+ +E 
Sbjct: 145 TGYG-GDLMKSGELYKSGE-LLAYSPGLPMPP----VPGSEP--KPVVEEPKVVESDKEE 204

Query: 319 ---VIRE--SSENQRKTGSTLTESSSQSASI----------SPQSESSTKSFQFPM 359
              ++ E  +S +  + G   +    Q  ++          S +S +S  SF FPM
Sbjct: 205 KVVLVEETHTSSSDEEEGKRESHEKEQHPAVSWKTPTTSYRSNRSSNSAHSFSFPM 252

[Close]

BLAST of CmoCh10G003170 vs. TAIR 10
Match: AT1G74220.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03630.1); Has 383 Blast hits to 347 proteins in 86 species: Archae - 0; Bacteria - 17; Metazoa - 87; Fungi - 65; Plants - 76; Viruses - 2; Other Eukaryotes - 136 (source: NCBI BLink). )

HSP 1 Score: 73.6 bits (179), Expect = 3.7e-13
Identity = 72/217 (33.18%), Postives = 101/217 (46.54%), Query Frame = 0


Query: 171 DEDVTISSMPSNRRTPVTPKHRIDLGSGSEAAIKYPPIQVMDR---------TDDPTSIS 230
           D  + +SS  S+  + +  + R D         + PP QVM+R         T  P +  
Sbjct: 28  DPIIRLSSSSSSSCSSIEAEPRPDQNHNHNNVEQSPPTQVMERSTNNTTTTTTSTPNTPP 87

Query: 231 YRIPSRVFSRSKSTAPMEWSVASNESLFSIQMGNMSFTREQLGWLGKSGELYRPGESALD 290
           YRIPS VF+R+ STAP EWS  SNESLFSI MGN SFT    G   KSGEL  P   +  
Sbjct: 88  YRIPSHVFARTTSTAP-EWSTISNESLFSIHMGNNSFTG---GDYFKSGELTFPQPPSPI 147

Query: 291 VSQHLAMRPS------DYGLIGTHPDGDMAVTEARAAETMREVIRESSENQRKTGSTLTE 350
            S   +  PS        G +G   +    V   + A    +  R S E+++K  +++ E
Sbjct: 148 TSPLPSPLPSTPHNVNQGGAVGAAAEVKTPVDIGKKAAETDKAYRASKEDEQKAAASIRE 207

Query: 351 -------------SSSQSASISPQSES-STKSFQFPM 359
                        ++    S+S +SE+ S KSF FP+
Sbjct: 208 VIMANEAANNNNKTNKLDRSVSRRSENLSVKSFAFPV 240

[Close]

BLAST of CmoCh10G003170 vs. TAIR 10
Match: AT3G02125.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G39200.1); Has 2247 Blast hits to 1434 proteins in 202 species: Archae - 4; Bacteria - 111; Metazoa - 942; Fungi - 239; Plants - 140; Viruses - 37; Other Eukaryotes - 774 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 9.2e-04
Identity = 27/44 (61.36%), Postives = 29/44 (65.91%), Query Frame = 0


Query: 216 DPTSISYRIPSRVFSRSKSTAPMEWSVASNESLFSIQMGNMSFT 260
           DPT    RIPS VFS SK     EWS+ASNESLFSI  GN S +
Sbjct: 90  DPT----RIPSSVFS-SKPGNSTEWSLASNESLFSIHDGNFSIS 128

The following BLAST results are available for this feature:

BLAST of CmoCh10G003170 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh10G003170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E2T8	1.2e-192	100.00	uncharacterized protein LOC111430064 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1E792	3.5e-192	99.72	uncharacterized protein LOC111430064 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JGT8	6.2e-133	97.68	uncharacterized protein LOC111484970 OS=Cucurbita maxima OX=3661 GN=LOC111484970...	[more]
A0A1S3BVA3	6.9e-108	59.55	uncharacterized protein LOC103494046 OS=Cucumis melo OX=3656 GN=LOC103494046 PE=...	[more]
A0A5A7UV09	1.0e-106	59.40	Putative serine-rich protein C215.13-like protein OS=Cucumis melo var. makuwa OX...	[more]

BLAST of CmoCh10G003170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921966.1	2.5e-192	100.00	uncharacterized protein LOC111430064 isoform X2 [Cucurbita moschata]	[more]
XP_022921965.1	7.2e-192	99.72	uncharacterized protein LOC111430064 isoform X1 [Cucurbita moschata]	[more]
KAG6589602.1	9.7e-189	98.32	hypothetical protein SDJN03_15025, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7023293.1	6.3e-188	97.77	hypothetical protein SDJN02_14318, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023516807.1	1.1e-187	98.04	uncharacterized protein LOC111780597 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh10G003170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03630.2	1.0e-15	54.35	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G03630.1	2.0e-14	38.64	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G74220.1	3.7e-13	33.18	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02125.1	9.2e-04	61.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 312..358
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 325..358
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..130
None	No IPR available	PANTHER	PTHR33673:SF22	SMOOTHELIN-LIKE PROTEIN 1	coord: 7..358
None	No IPR available	PANTHER	PTHR33673	SUPPRESSOR SRP40-LIKE PROTEIN	coord: 7..358

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G003170.1	CmoCh10G003170.1	mRNA