CmoCh10G002790 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G002790
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Calcium-binding protein CML15
Location	Cmo_Chr10: 1243186 .. 1243668 (-)
RNA-Seq Expression	CmoCh10G002790
Synteny	CmoCh10G002790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCACTCGCAGTTGAGCAGCTAAATCAATTGCGCGACATTTTTGCACGATTCGACATGGATTCAGATGGAAGCCTCACGATTCTTGAACTAGCAGCGTTGCTTCGATCGCTCGGTCTCAAGCCCTCCGGCGACCAAATCCATGTTCTTCTCGCTAATATGGATGCGAACGGAAATGGCTCTGTAGAGTTTGATGAATTGGTGACTGCGATTAGGCCGGATTTTAACGAGGAGGTAATGGTAAATCAGACGCAACTTCTTGAGGTTTTCCGTTCGTTCGATCGAGACGGCAATGGATATATAACCGCCGCGGAACTTGCGGGATCGATGGCGAAGATGGGACAGCCATTGACATACAGAGAGCTAACGGAGATGATGAAGGAAGCCGATACGGATGGCGATGGTGTTATTAGCTTCAATGAATTTGCATCTGTAATGGCTAAATCTGCCTCTGAATTTCTAGGGCTTGCAATCGCTTAA

mRNA sequence

ATGGCTGCACTCGCAGTTGAGCAGCTAAATCAATTGCGCGACATTTTTGCACGATTCGACATGGATTCAGATGGAAGCCTCACGATTCTTGAACTAGCAGCGTTGCTTCGATCGCTCGGTCTCAAGCCCTCCGGCGACCAAATCCATGTTCTTCTCGCTAATATGGATGCGAACGGAAATGGCTCTGTAGAGTTTGATGAATTGGTGACTGCGATTAGGCCGGATTTTAACGAGGAGGTAATGGTAAATCAGACGCAACTTCTTGAGGTTTTCCGTTCGTTCGATCGAGACGGCAATGGATATATAACCGCCGCGGAACTTGCGGGATCGATGGCGAAGATGGGACAGCCATTGACATACAGAGAGCTAACGGAGATGATGAAGGAAGCCGATACGGATGGCGATGGTGTTATTAGCTTCAATGAATTTGCATCTGTAATGGCTAAATCTGCCTCTGAATTTCTAGGGCTTGCAATCGCTTAA

Coding sequence (CDS)

ATGGCTGCACTCGCAGTTGAGCAGCTAAATCAATTGCGCGACATTTTTGCACGATTCGACATGGATTCAGATGGAAGCCTCACGATTCTTGAACTAGCAGCGTTGCTTCGATCGCTCGGTCTCAAGCCCTCCGGCGACCAAATCCATGTTCTTCTCGCTAATATGGATGCGAACGGAAATGGCTCTGTAGAGTTTGATGAATTGGTGACTGCGATTAGGCCGGATTTTAACGAGGAGGTAATGGTAAATCAGACGCAACTTCTTGAGGTTTTCCGTTCGTTCGATCGAGACGGCAATGGATATATAACCGCCGCGGAACTTGCGGGATCGATGGCGAAGATGGGACAGCCATTGACATACAGAGAGCTAACGGAGATGATGAAGGAAGCCGATACGGATGGCGATGGTGTTATTAGCTTCAATGAATTTGCATCTGTAATGGCTAAATCTGCCTCTGAATTTCTAGGGCTTGCAATCGCTTAA

Protein sequence

MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGNGSVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYRELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA

Homology

[Close]

BLAST of CmoCh10G002790 vs. ExPASy Swiss-Prot
Match: Q9FZ75 (Probable calcium-binding protein CML15 OS=Arabidopsis thaliana OX=3702 GN=CML15 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 4.5e-64
Identity = 121/153 (79.08%), Postives = 140/153 (91.50%), Query Frame = 0


Query: 7   EQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGNGSVEFD 66
           +Q+ QL+DIF RFDMD+DGSLTILELAALLRSLGLKPSGDQIHVLLA+MD+NGNG VEFD
Sbjct: 3   DQIRQLKDIFDRFDMDADGSLTILELAALLRSLGLKPSGDQIHVLLASMDSNGNGFVEFD 62

Query: 67  ELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYRELTEM 126
           ELV  I PD NEEV++N  QLLE+F+SFDRDGNG+I+AAELAG+MAKMGQPLTY+ELTEM
Sbjct: 63  ELVGTILPDLNEEVLINSEQLLEIFKSFDRDGNGFISAAELAGAMAKMGQPLTYKELTEM 122

Query: 127 MKEADTDGDGVISFNEFASVMAKSASEFLGLAI 160
           +KEADT+GDGVISF EFAS+MAKSA ++ GL I
Sbjct: 123 IKEADTNGDGVISFGEFASIMAKSAVDYFGLKI 155

[Close]

BLAST of CmoCh10G002790 vs. ExPASy Swiss-Prot
Match: Q9LI84 (Probable calcium-binding protein CML16 OS=Arabidopsis thaliana OX=3702 GN=CML16 PE=2 SV=2)

HSP 1 Score: 239.6 bits (610), Expect = 2.5e-62
Identity = 120/151 (79.47%), Postives = 135/151 (89.40%), Query Frame = 0


Query: 7   EQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGNGSVEFD 66
           +Q+ QL+DIFARFDMD DGSLT LELAALLRSLG+KP GDQI +LL  +D NGNGSVEFD
Sbjct: 8   DQIKQLKDIFARFDMDKDGSLTQLELAALLRSLGIKPRGDQISLLLNQIDRNGNGSVEFD 67

Query: 67  ELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYRELTEM 126
           ELV AI PD NEEV++NQ QL+EVFRSFDRDGNG ITAAELAGSMAKMG PLTYRELTEM
Sbjct: 68  ELVVAILPDINEEVLINQEQLMEVFRSFDRDGNGSITAAELAGSMAKMGHPLTYRELTEM 127

Query: 127 MKEADTDGDGVISFNEFASVMAKSASEFLGL 158
           M EAD++GDGVISFNEF+ +MAKSA++FLGL
Sbjct: 128 MTEADSNGDGVISFNEFSHIMAKSAADFLGL 158

[Close]

BLAST of CmoCh10G002790 vs. ExPASy Swiss-Prot
Match: Q6L5F4 (Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 GN=CML14 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 7.7e-56
Identity = 110/152 (72.37%), Postives = 131/152 (86.18%), Query Frame = 0


Query: 8   QLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGNGSVEFDE 67
           QL QLR++F RFDM+ DGSLT LELAALLRSLGL+P+GD++H LLA MDANGNGSVEFDE
Sbjct: 22  QLKQLRELFRRFDMNGDGSLTQLELAALLRSLGLRPTGDEVHALLAGMDANGNGSVEFDE 81

Query: 68  LVTAIRPDFNEEV-MVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYRELTEM 127
           L  AI P    +  +V+Q QLLEVFR+FDRDGNG+I+AAELA SMA++GQPLT+ ELT M
Sbjct: 82  LAAAIAPVLTTQTHLVDQAQLLEVFRAFDRDGNGFISAAELARSMARLGQPLTFEELTRM 141

Query: 128 MKEADTDGDGVISFNEFASVMAKSASEFLGLA 159
           M++ADTDGDGVISF EFA+VMAKSA +FLG+A
Sbjct: 142 MRDADTDGDGVISFKEFAAVMAKSALDFLGVA 173

[Close]

BLAST of CmoCh10G002790 vs. ExPASy Swiss-Prot
Match: Q5ZD81 (Probable calcium-binding protein CML12 OS=Oryza sativa subsp. japonica OX=39947 GN=CML12 PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.4e-49
Identity = 104/162 (64.20%), Postives = 128/162 (79.01%), Query Frame = 0


Query: 2   AALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKP-SGDQIHVLLANMDANGN 61
           A L  EQL QL +IF RFD+D DGSLT LELAALLRSLGL+P +GD+IH L+A +DA+GN
Sbjct: 86  ARLRGEQLRQLHEIFLRFDLDGDGSLTKLELAALLRSLGLRPAAGDEIHALIAAIDADGN 145

Query: 62  GSVEFDELVTA----IRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQ 121
           G+VEFDEL ++    I       V V+Q +L E FR+FDRDGNG+I+AAELA SMA+MG 
Sbjct: 146 GTVEFDELASSLADLILGPCRPSVAVDQAELAEAFRAFDRDGNGFISAAELARSMARMGH 205

Query: 122 PLTYRELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLA 159
           P+ Y ELT+MM+EADTDGDG+ISF EF ++MAKSA +FLGLA
Sbjct: 206 PICYAELTDMMREADTDGDGLISFEEFTAIMAKSALDFLGLA 247

[Close]

BLAST of CmoCh10G002790 vs. ExPASy Swiss-Prot
Match: Q9M8U1 (Probable calcium-binding protein CML18 OS=Arabidopsis thaliana OX=3702 GN=CML18 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.2e-38
Identity = 86/150 (57.33%), Postives = 99/150 (66.00%), Query Frame = 0


Query: 2   AALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGNG 61
           A L  EQL +LR+IF  FD + DGSLT LEL +LLRSLGLKPS DQ+  L+   D N NG
Sbjct: 11  AKLGDEQLAELREIFRSFDQNKDGSLTELELGSLLRSLGLKPSQDQLDTLIQKADRNNNG 70

Query: 62  SVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYR 121
            VEF E V  + PD   +      QL  +FR FDRDGNGYITAAELA SMAK+G  LT  
Sbjct: 71  LVEFSEFVALVEPDL-VKCPYTDDQLKAIFRMFDRDGNGYITAAELAHSMAKLGHALTAE 130

Query: 122 ELTEMMKEADTDGDGVISFNEFASVMAKSA 152
           ELT M+KEAD DGDG I F EF   +  +A
Sbjct: 131 ELTGMIKEADRDGDGCIDFQEFVQAITSAA 159

[Close]

BLAST of CmoCh10G002790 vs. ExPASy TrEMBL
Match: A0A6J1E1G5 (probable calcium-binding protein CML15 OS=Cucurbita moschata OX=3662 GN=LOC111429950 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 6.1e-80
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN 60

Query: 61  GSVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 61  GSVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120

Query: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA 161
           RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA
Sbjct: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA 160

[Close]

BLAST of CmoCh10G002790 vs. ExPASy TrEMBL
Match: A0A6J1JGZ7 (probable calcium-binding protein CML15 OS=Cucurbita maxima OX=3661 GN=LOC111485022 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.0e-79
Identity = 159/160 (99.38%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN 60

Query: 61  GSVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAIRPDFNEEV VNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 61  GSVEFDELVTAIRPDFNEEVTVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120

Query: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA 161
           RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA
Sbjct: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA 160

[Close]

BLAST of CmoCh10G002790 vs. ExPASy TrEMBL
Match: A0A6J1C0M6 (probable calcium-binding protein CML15 OS=Momordica charantia OX=3673 GN=LOC111007259 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.5e-78
Identity = 157/160 (98.12%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVL+ANMDANGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60

Query: 61  GSVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAI PDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 61  GSVEFDELVTAIMPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120

Query: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA 161
           RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAI+
Sbjct: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIS 160

[Close]

BLAST of CmoCh10G002790 vs. ExPASy TrEMBL
Match: A0A6J1L5D2 (probable calcium-binding protein CML15 OS=Cucurbita maxima OX=3661 GN=LOC111499274 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.4e-78
Identity = 154/160 (96.25%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVL+ANMDANGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60

Query: 61  GSVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAIRPDFNEE+MVNQT LLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 61  GSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120

Query: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA 161
           RELTEMMKEADTDGDGVISFNEFAS+MAKSAS+FLGLAI+
Sbjct: 121 RELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 160

[Close]

BLAST of CmoCh10G002790 vs. ExPASy TrEMBL
Match: A0A6J1EZV6 (probable calcium-binding protein CML15 OS=Cucurbita moschata OX=3662 GN=LOC111440882 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.4e-78
Identity = 154/160 (96.25%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVL+ANMDANGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60

Query: 61  GSVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAIRPDFNEE+MVNQT LLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 61  GSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120

Query: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA 161
           RELTEMMKEADTDGDGVISFNEFAS+MAKSAS+FLGLAI+
Sbjct: 121 RELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 160

[Close]

BLAST of CmoCh10G002790 vs. NCBI nr
Match: KAG6589571.1 (putative calcium-binding protein CML15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 306.6 bits (784), Expect = 1.3e-79
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN
Sbjct: 67  MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN 126

Query: 61  GSVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 127 GSVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 186

Query: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA 161
           RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA
Sbjct: 187 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA 226

[Close]

BLAST of CmoCh10G002790 vs. NCBI nr
Match: XP_022921807.1 (probable calcium-binding protein CML15 [Cucurbita moschata] >XP_023516651.1 probable calcium-binding protein CML15 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306.6 bits (784), Expect = 1.3e-79
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN 60

Query: 61  GSVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 61  GSVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120

Query: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA 161
           RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA
Sbjct: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA 160

[Close]

BLAST of CmoCh10G002790 vs. NCBI nr
Match: XP_022987480.1 (probable calcium-binding protein CML15 [Cucurbita maxima])

HSP 1 Score: 304.3 bits (778), Expect = 6.2e-79
Identity = 159/160 (99.38%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN 60

Query: 61  GSVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAIRPDFNEEV VNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 61  GSVEFDELVTAIRPDFNEEVTVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120

Query: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA 161
           RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA
Sbjct: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA 160

[Close]

BLAST of CmoCh10G002790 vs. NCBI nr
Match: XP_022135250.1 (probable calcium-binding protein CML15 [Momordica charantia])

HSP 1 Score: 302.0 bits (772), Expect = 3.1e-78
Identity = 157/160 (98.12%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVL+ANMDANGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60

Query: 61  GSVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAI PDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 61  GSVEFDELVTAIMPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120

Query: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA 161
           RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAI+
Sbjct: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIS 160

[Close]

BLAST of CmoCh10G002790 vs. NCBI nr
Match: XP_022933477.1 (probable calcium-binding protein CML15 [Cucurbita moschata] >XP_023006598.1 probable calcium-binding protein CML15 [Cucurbita maxima] >XP_023529563.1 probable calcium-binding protein CML15 [Cucurbita pepo subsp. pepo] >KAG6587636.1 putative calcium-binding protein CML15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 300.4 bits (768), Expect = 9.0e-78
Identity = 154/160 (96.25%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGN 60
           MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVL+ANMDANGN
Sbjct: 1   MAALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLVANMDANGN 60

Query: 61  GSVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120
           GSVEFDELVTAIRPDFNEE+MVNQT LLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY
Sbjct: 61  GSVEFDELVTAIRPDFNEEIMVNQTHLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTY 120

Query: 121 RELTEMMKEADTDGDGVISFNEFASVMAKSASEFLGLAIA 161
           RELTEMMKEADTDGDGVISFNEFAS+MAKSAS+FLGLAI+
Sbjct: 121 RELTEMMKEADTDGDGVISFNEFASIMAKSASDFLGLAIS 160

[Close]

BLAST of CmoCh10G002790 vs. TAIR 10
Match: AT1G18530.1 (EF hand calcium-binding protein family )

HSP 1 Score: 245.4 bits (625), Expect = 3.2e-65
Identity = 121/153 (79.08%), Postives = 140/153 (91.50%), Query Frame = 0


Query: 7   EQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGNGSVEFD 66
           +Q+ QL+DIF RFDMD+DGSLTILELAALLRSLGLKPSGDQIHVLLA+MD+NGNG VEFD
Sbjct: 3   DQIRQLKDIFDRFDMDADGSLTILELAALLRSLGLKPSGDQIHVLLASMDSNGNGFVEFD 62

Query: 67  ELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYRELTEM 126
           ELV  I PD NEEV++N  QLLE+F+SFDRDGNG+I+AAELAG+MAKMGQPLTY+ELTEM
Sbjct: 63  ELVGTILPDLNEEVLINSEQLLEIFKSFDRDGNGFISAAELAGAMAKMGQPLTYKELTEM 122

Query: 127 MKEADTDGDGVISFNEFASVMAKSASEFLGLAI 160
           +KEADT+GDGVISF EFAS+MAKSA ++ GL I
Sbjct: 123 IKEADTNGDGVISFGEFASIMAKSAVDYFGLKI 155

[Close]

BLAST of CmoCh10G002790 vs. TAIR 10
Match: AT3G25600.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 239.6 bits (610), Expect = 1.8e-63
Identity = 120/151 (79.47%), Postives = 135/151 (89.40%), Query Frame = 0


Query: 7   EQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGNGSVEFD 66
           +Q+ QL+DIFARFDMD DGSLT LELAALLRSLG+KP GDQI +LL  +D NGNGSVEFD
Sbjct: 8   DQIKQLKDIFARFDMDKDGSLTQLELAALLRSLGIKPRGDQISLLLNQIDRNGNGSVEFD 67

Query: 67  ELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYRELTEM 126
           ELV AI PD NEEV++NQ QL+EVFRSFDRDGNG ITAAELAGSMAKMG PLTYRELTEM
Sbjct: 68  ELVVAILPDINEEVLINQEQLMEVFRSFDRDGNGSITAAELAGSMAKMGHPLTYRELTEM 127

Query: 127 MKEADTDGDGVISFNEFASVMAKSASEFLGL 158
           M EAD++GDGVISFNEF+ +MAKSA++FLGL
Sbjct: 128 MTEADSNGDGVISFNEFSHIMAKSAADFLGL 158

[Close]

BLAST of CmoCh10G002790 vs. TAIR 10
Match: AT3G03000.1 (EF hand calcium-binding protein family )

HSP 1 Score: 159.1 bits (401), Expect = 3.0e-39
Identity = 86/150 (57.33%), Postives = 99/150 (66.00%), Query Frame = 0


Query: 2   AALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGNG 61
           A L  EQL +LR+IF  FD + DGSLT LEL +LLRSLGLKPS DQ+  L+   D N NG
Sbjct: 11  AKLGDEQLAELREIFRSFDQNKDGSLTELELGSLLRSLGLKPSQDQLDTLIQKADRNNNG 70

Query: 62  SVEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYR 121
            VEF E V  + PD   +      QL  +FR FDRDGNGYITAAELA SMAK+G  LT  
Sbjct: 71  LVEFSEFVALVEPDL-VKCPYTDDQLKAIFRMFDRDGNGYITAAELAHSMAKLGHALTAE 130

Query: 122 ELTEMMKEADTDGDGVISFNEFASVMAKSA 152
           ELT M+KEAD DGDG I F EF   +  +A
Sbjct: 131 ELTGMIKEADRDGDGCIDFQEFVQAITSAA 159

[Close]

BLAST of CmoCh10G002790 vs. TAIR 10
Match: AT1G32250.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 151.0 bits (380), Expect = 8.2e-37
Identity = 80/149 (53.69%), Postives = 99/149 (66.44%), Query Frame = 0


Query: 7   EQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGNGSVEFD 66
           EQ+N+LR+IF  FD + DGSLT LEL +LLR+LG+KPS DQ   L+   D   NG VEF 
Sbjct: 12  EQINELREIFRSFDRNKDGSLTQLELGSLLRALGVKPSPDQFETLIDKADTKSNGLVEFP 71

Query: 67  ELVTAIRPDF----NEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYRE 126
           E V  + P+            + QLL +FR FD DGNG+ITAAELA SMAK+G  LT  E
Sbjct: 72  EFVALVSPELLSPAKRTTPYTEEQLLRLFRIFDTDGNGFITAAELAHSMAKLGHALTVAE 131

Query: 127 LTEMMKEADTDGDGVISFNEFASVMAKSA 152
           LT M+KEAD+DGDG I+F EFA  +  +A
Sbjct: 132 LTGMIKEADSDGDGRINFQEFAKAINSAA 160

[Close]

BLAST of CmoCh10G002790 vs. TAIR 10
Match: AT4G14640.1 (calmodulin 8 )

HSP 1 Score: 118.2 bits (295), Expect = 5.9e-27
Identity = 55/145 (37.93%), Postives = 93/145 (64.14%), Query Frame = 0


Query: 3   ALAVEQLNQLRDIFARFDMDSDGSLTILELAALLRSLGLKPSGDQIHVLLANMDANGNGS 62
           AL  +Q+ + ++ F  FD D DG +T+ ELA ++RSL   P+  ++H ++  +D++ NG+
Sbjct: 5   ALTKDQITEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEQELHDIITEIDSDSNGT 64

Query: 63  VEFDELVTAIRPDFNEEVMVNQTQLLEVFRSFDRDGNGYITAAELAGSMAKMGQPLTYRE 122
           +EF E +  +     E     + +L E F+ FD+D NGYI+A+EL+  M  +G+ LT  E
Sbjct: 65  IEFAEFLNLMAKKLQESDA--EEELKEAFKVFDKDQNGYISASELSHVMINLGEKLTDEE 124

Query: 123 LTEMMKEADTDGDGVISFNEFASVM 148
           + +M+KEAD DGDG ++++EF  +M
Sbjct: 125 VEQMIKEADLDGDGQVNYDEFVKMM 147

The following BLAST results are available for this feature:

BLAST of CmoCh10G002790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ75	4.5e-64	79.08	Probable calcium-binding protein CML15 OS=Arabidopsis thaliana OX=3702 GN=CML15 ...	[more]
Q9LI84	2.5e-62	79.47	Probable calcium-binding protein CML16 OS=Arabidopsis thaliana OX=3702 GN=CML16 ...	[more]
Q6L5F4	7.7e-56	72.37	Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q5ZD81	1.4e-49	64.20	Probable calcium-binding protein CML12 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9M8U1	4.2e-38	57.33	Probable calcium-binding protein CML18 OS=Arabidopsis thaliana OX=3702 GN=CML18 ...	[more]

BLAST of CmoCh10G002790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E1G5	6.1e-80	100.00	probable calcium-binding protein CML15 OS=Cucurbita moschata OX=3662 GN=LOC11142...	[more]
A0A6J1JGZ7	3.0e-79	99.38	probable calcium-binding protein CML15 OS=Cucurbita maxima OX=3661 GN=LOC1114850...	[more]
A0A6J1C0M6	1.5e-78	98.13	probable calcium-binding protein CML15 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1L5D2	4.4e-78	96.25	probable calcium-binding protein CML15 OS=Cucurbita maxima OX=3661 GN=LOC1114992...	[more]
A0A6J1EZV6	4.4e-78	96.25	probable calcium-binding protein CML15 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]

BLAST of CmoCh10G002790 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589571.1	1.3e-79	100.00	putative calcium-binding protein CML15, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022921807.1	1.3e-79	100.00	probable calcium-binding protein CML15 [Cucurbita moschata] >XP_023516651.1 prob...	[more]
XP_022987480.1	6.2e-79	99.38	probable calcium-binding protein CML15 [Cucurbita maxima]	[more]
XP_022135250.1	3.1e-78	98.13	probable calcium-binding protein CML15 [Momordica charantia]	[more]
XP_022933477.1	9.0e-78	96.25	probable calcium-binding protein CML15 [Cucurbita moschata] >XP_023006598.1 prob...	[more]

BLAST of CmoCh10G002790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18530.1	3.2e-65	79.08	EF hand calcium-binding protein family	[more]
AT3G25600.1	1.8e-63	79.47	Calcium-binding EF-hand family protein	[more]
AT3G03000.1	3.0e-39	57.33	EF hand calcium-binding protein family	[more]
AT1G32250.1	8.2e-37	53.69	Calcium-binding EF-hand family protein	[more]
AT4G14640.1	5.9e-27	37.93	calmodulin 8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 11..39 e-value: 0.046 score: 22.9 coord: 122..150 e-value: 8.4E-8 score: 41.9 coord: 86..114 e-value: 5.7E-4 score: 29.2 coord: 47..75 e-value: 0.56 score: 19.3
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 85..147 e-value: 3.5E-15 score: 56.2 coord: 10..72 e-value: 3.4E-11 score: 43.4
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 118..153 score: 14.039183
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 7..42 score: 13.481276
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 82..117 score: 14.039183
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 43..78 score: 9.771187
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 11..73 e-value: 4.71673E-13 score: 58.7133
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 86..148 e-value: 4.81798E-19 score: 74.1213
None	No IPR available	GENE3D	1.10.238.10		coord: 1..103 e-value: 8.5E-27 score: 95.5
None	No IPR available	GENE3D	1.10.238.10		coord: 104..157 e-value: 8.6E-16 score: 59.6
None	No IPR available	PANTHER	PTHR23050:SF351	CALCIUM-BINDING PROTEIN CML15-RELATED	coord: 3..158
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 3..158
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 56..68
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 20..32
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 95..107
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 131..143
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 4..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G002790.1	CmoCh10G002790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050790	regulation of catalytic activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0030234	enzyme regulator activity