CmoCh10G002080 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G002080
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Cmo_Chr10: 931570 .. 933456 (+)
RNA-Seq Expression	CmoCh10G002080
Synteny	CmoCh10G002080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGTGATCTTCCGGCGATGCCGTTGTTCGGCGGATCGGCATCTTCATTCCCTTCGCCTTCCTCATTTCGCATCCACCGCTTCTCTCCTTCACTCTCCGATCTCTCTGCTTTCTTCCAAATTTCGTGAACAAAACTCAACGCTTCGCTTCGATAGAGAGCCGCTGATTTCTCTCATAAAGTCATGCACCCACAAATCACAATTGCTGCAAATCCATGCCCACATGATCCGCACGTCTTTCATTCAAGACCCCATTGTTTCCCTCCGCTTCTTGACTCGCATCGTTTCCGCGCCTTTTCGCGAATTGGGCTATTCGCGAAGATTCTTCTCTCAGCTGACGAACCCATTTGTTTCTCATTACAATACGCTGTTGAGAGCCTACTCGTTGAGCCGTTCACCTCTGGAGGGATTGTACATGTACAGAGATATGGAGAGGCGAGGTGTTCATGCTGATCCTTTGTCTTCTTCCTTTGCCGTTAAGTCGTGTATAAGAATGCTTTCATTATTTAGTGGGGTTCAGATTCACGCAAGGATCTTTAGAAATGGGCATCAATCGGATAGTCTTTTGCTCACCTCCATGATGGATTTGTATTCTCATTGTGGCAAACTTGAGGATGCATGCAAACTGTTCGATGAAATTCCTCAAAGAGATGTTGTTGCTTGGAACGTTTTGATTTCGTGTCTAACTCGAAATAAACGAACAAGGGATGCTTTGGGTTTGTTTGAGATCATGCAGAGTCCAACGTATCTCTGCAAACCTGATAAAGTTACCTGTTTACTTCTTCTCCAAGCCTGTGCGGACTTGAATGCATTGGAATTTGGCGAAAGGATTCATAGTCATATTCAACAGCACGGTTATAATACCGAGAGTAATTTGTGCAATTCGCTGATATCCATGTATTCGCGGTGTGGACGTGTGGATAAGGCGTATGAAGTGTTTGATAAAATGCCTGAGAAAAATGTTGTTTCGTGGAGTGCGATGATTTCCGGGTTATCGATGAATGGACACGGGAGAGAAGCTATTGAAGCGTTTTGGGCGATGCAAAAGAAGGGTGTTGAGCCTGATGATCATACTTTCACTGCAGTTCTTTCTGCTTGTAGCCATTGTGGGCTGGTTGATGAAGGAATGGCGTTTTTTGATCGTATGAGACAAGAGTTCATGATAGTTCCCACCGTCCATCACTATGGATGTATGGTTGATCTCTTGGGTCGTGCTGGAATGCTCGACCAAGCCTATCAGCTCGTAATGTCAATGGAGGTGAATCCAGATGCGACAATGTGGAGGACCCTTCTTGGAGCTTGCAGAATTCACGGTCATGCAAACCTTGGGGAGCGCATAATTGAGCATTTGATTGAACTCAAATCTCAAGAAGCAGGTGATTATGTGCTGCTGCTGAACATTTATTCTTCGGCTGGGAACTGGGTCAAGGTAACTGAATTGAGGAAATTCATGAAGGAAAGGGGTATCTATACTACACCCGGCTGCACCACAATAGAACTGAATGGGGTGGTGCATGAGTTTGCTGTGGATGATATTTCGCATCCGATGAAGGACAAGATCTACGAGCAGCTGGACGAGATCAACAAGCAGCTAAAGATTGCAGGTTATGAAGCTGAAATATCATCTGAATTACACAACTTAAAGGCAGAAGATAAGGGGTATGCGCTTTCTTTCCATAGTGAGAAATTGGCCATAGCCTTTGGGGTTCTTGCAACCCCGCCAGGAAGAACCATCAGAGTGGCAAACAATCTTCGTACTTGCATGGATTGTCATAACTTTGCTAAATATGTCTCAAGTGTTTATAACCGAAAAGTGGTTGTTAGGGACCGAAGTCGGTTCCATCATTTCCGAGAGGGTCGGTGTTCCTGCAACGATTATTGGTAG

mRNA sequence

ATGACTGTGATCTTCCGGCGATGCCGTTGTTCGGCGGATCGGCATCTTCATTCCCTTCGCCTTCCTCATTTCGCATCCACCGCTTCTCTCCTTCACTCTCCGATCTCTCTGCTTTCTTCCAAATTTCGTGAACAAAACTCAACGCTTCGCTTCGATAGAGAGCCGCTGATTTCTCTCATAAAGTCATGCACCCACAAATCACAATTGCTGCAAATCCATGCCCACATGATCCGCACGTCTTTCATTCAAGACCCCATTGTTTCCCTCCGCTTCTTGACTCGCATCGTTTCCGCGCCTTTTCGCGAATTGGGCTATTCGCGAAGATTCTTCTCTCAGCTGACGAACCCATTTGTTTCTCATTACAATACGCTGTTGAGAGCCTACTCGTTGAGCCGTTCACCTCTGGAGGGATTGTACATGTACAGAGATATGGAGAGGCGAGGTGTTCATGCTGATCCTTTGTCTTCTTCCTTTGCCGTTAAGTCGTGTATAAGAATGCTTTCATTATTTAGTGGGGTTCAGATTCACGCAAGGATCTTTAGAAATGGGCATCAATCGGATAGTCTTTTGCTCACCTCCATGATGGATTTGTATTCTCATTGTGGCAAACTTGAGGATGCATGCAAACTGTTCGATGAAATTCCTCAAAGAGATGTTGTTGCTTGGAACGTTTTGATTTCGTGTCTAACTCGAAATAAACGAACAAGGGATGCTTTGGGTTTGTTTGAGATCATGCAGAGTCCAACGTATCTCTGCAAACCTGATAAAGTTACCTGTTTACTTCTTCTCCAAGCCTGTGCGGACTTGAATGCATTGGAATTTGGCGAAAGGATTCATAGTCATATTCAACAGCACGGTTATAATACCGAGAGTAATTTGTGCAATTCGCTGATATCCATGTATTCGCGGTGTGGACGTGTGGATAAGGCGTATGAAGTGTTTGATAAAATGCCTGAGAAAAATGTTGTTTCGTGGAGTGCGATGATTTCCGGGTTATCGATGAATGGACACGGGAGAGAAGCTATTGAAGCGTTTTGGGCGATGCAAAAGAAGGGTGTTGAGCCTGATGATCATACTTTCACTGCAGTTCTTTCTGCTTGTAGCCATTGTGGGCTGGTTGATGAAGGAATGGCGTTTTTTGATCGTATGAGACAAGAGTTCATGATAGTTCCCACCGTCCATCACTATGGATGTATGGTTGATCTCTTGGGTCGTGCTGGAATGCTCGACCAAGCCTATCAGCTCGTAATGTCAATGGAGGTGAATCCAGATGCGACAATGTGGAGGACCCTTCTTGGAGCTTGCAGAATTCACGGTCATGCAAACCTTGGGGAGCGCATAATTGAGCATTTGATTGAACTCAAATCTCAAGAAGCAGGTGATTATGTGCTGCTGCTGAACATTTATTCTTCGGCTGGGAACTGGGTCAAGGTAACTGAATTGAGGAAATTCATGAAGGAAAGGGGTATCTATACTACACCCGGCTGCACCACAATAGAACTGAATGGGGTGGTGCATGAGTTTGCTGTGGATGATATTTCGCATCCGATGAAGGACAAGATCTACGAGCAGCTGGACGAGATCAACAAGCAGCTAAAGATTGCAGGTTATGAAGCTGAAATATCATCTGAATTACACAACTTAAAGGCAGAAGATAAGGGGTATGCGCTTTCTTTCCATAGTGAGAAATTGGCCATAGCCTTTGGGGTTCTTGCAACCCCGCCAGGAAGAACCATCAGAGTGGCAAACAATCTTCGTACTTGCATGGATTGTCATAACTTTGCTAAATATGTCTCAAGTGTTTATAACCGAAAAGTGGTTGTTAGGGACCGAAGTCGGTTCCATCATTTCCGAGAGGGTCGGTGTTCCTGCAACGATTATTGGTAG

Coding sequence (CDS)

ATGACTGTGATCTTCCGGCGATGCCGTTGTTCGGCGGATCGGCATCTTCATTCCCTTCGCCTTCCTCATTTCGCATCCACCGCTTCTCTCCTTCACTCTCCGATCTCTCTGCTTTCTTCCAAATTTCGTGAACAAAACTCAACGCTTCGCTTCGATAGAGAGCCGCTGATTTCTCTCATAAAGTCATGCACCCACAAATCACAATTGCTGCAAATCCATGCCCACATGATCCGCACGTCTTTCATTCAAGACCCCATTGTTTCCCTCCGCTTCTTGACTCGCATCGTTTCCGCGCCTTTTCGCGAATTGGGCTATTCGCGAAGATTCTTCTCTCAGCTGACGAACCCATTTGTTTCTCATTACAATACGCTGTTGAGAGCCTACTCGTTGAGCCGTTCACCTCTGGAGGGATTGTACATGTACAGAGATATGGAGAGGCGAGGTGTTCATGCTGATCCTTTGTCTTCTTCCTTTGCCGTTAAGTCGTGTATAAGAATGCTTTCATTATTTAGTGGGGTTCAGATTCACGCAAGGATCTTTAGAAATGGGCATCAATCGGATAGTCTTTTGCTCACCTCCATGATGGATTTGTATTCTCATTGTGGCAAACTTGAGGATGCATGCAAACTGTTCGATGAAATTCCTCAAAGAGATGTTGTTGCTTGGAACGTTTTGATTTCGTGTCTAACTCGAAATAAACGAACAAGGGATGCTTTGGGTTTGTTTGAGATCATGCAGAGTCCAACGTATCTCTGCAAACCTGATAAAGTTACCTGTTTACTTCTTCTCCAAGCCTGTGCGGACTTGAATGCATTGGAATTTGGCGAAAGGATTCATAGTCATATTCAACAGCACGGTTATAATACCGAGAGTAATTTGTGCAATTCGCTGATATCCATGTATTCGCGGTGTGGACGTGTGGATAAGGCGTATGAAGTGTTTGATAAAATGCCTGAGAAAAATGTTGTTTCGTGGAGTGCGATGATTTCCGGGTTATCGATGAATGGACACGGGAGAGAAGCTATTGAAGCGTTTTGGGCGATGCAAAAGAAGGGTGTTGAGCCTGATGATCATACTTTCACTGCAGTTCTTTCTGCTTGTAGCCATTGTGGGCTGGTTGATGAAGGAATGGCGTTTTTTGATCGTATGAGACAAGAGTTCATGATAGTTCCCACCGTCCATCACTATGGATGTATGGTTGATCTCTTGGGTCGTGCTGGAATGCTCGACCAAGCCTATCAGCTCGTAATGTCAATGGAGGTGAATCCAGATGCGACAATGTGGAGGACCCTTCTTGGAGCTTGCAGAATTCACGGTCATGCAAACCTTGGGGAGCGCATAATTGAGCATTTGATTGAACTCAAATCTCAAGAAGCAGGTGATTATGTGCTGCTGCTGAACATTTATTCTTCGGCTGGGAACTGGGTCAAGGTAACTGAATTGAGGAAATTCATGAAGGAAAGGGGTATCTATACTACACCCGGCTGCACCACAATAGAACTGAATGGGGTGGTGCATGAGTTTGCTGTGGATGATATTTCGCATCCGATGAAGGACAAGATCTACGAGCAGCTGGACGAGATCAACAAGCAGCTAAAGATTGCAGGTTATGAAGCTGAAATATCATCTGAATTACACAACTTAAAGGCAGAAGATAAGGGGTATGCGCTTTCTTTCCATAGTGAGAAATTGGCCATAGCCTTTGGGGTTCTTGCAACCCCGCCAGGAAGAACCATCAGAGTGGCAAACAATCTTCGTACTTGCATGGATTGTCATAACTTTGCTAAATATGTCTCAAGTGTTTATAACCGAAAAGTGGTTGTTAGGGACCGAAGTCGGTTCCATCATTTCCGAGAGGGTCGGTGTTCCTGCAACGATTATTGGTAG

Protein sequence

MTVIFRRCRCSADRHLHSLRLPHFASTASLLHSPISLLSSKFREQNSTLRFDREPLISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSHYNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQIHARIFRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSMEVNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWVKVTELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAEISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW

Homology

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BLAST of CmoCh10G002080 vs. ExPASy Swiss-Prot
Match: Q9SN85 (Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H76 PE=2 SV=1)

HSP 1 Score: 740.3 bits (1910), Expect = 1.7e-212
Identity = 363/578 (62.80%), Postives = 452/578 (78.20%), Query Frame = 0


Query: 56  LISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRI-VSAPFRELGYSRRFFSQLT 115
           L+SLI S T K  L QIHA ++RTS I++  V   FL+R+ +S   R++ YS R FSQ  
Sbjct: 14  LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL 73

Query: 116 NPFVSHYNTLLRAYSLSRSPLEGLYMYRDMERR-GVHADPLSSSFAVKSCIRMLSLFSGV 175
           NP +SH NT++RA+SLS++P EG  ++R + R   + A+PLSSSFA+K CI+   L  G+
Sbjct: 74  NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133

Query: 176 QIHARIFRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNK 235
           QIH +IF +G  SDSLL+T++MDLYS C    DACK+FDEIP+RD V+WNVL SC  RNK
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193

Query: 236 RTRDALGLFEIMQSPTYLC-KPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESN 295
           RTRD L LF+ M++    C KPD VTCLL LQACA+L AL+FG+++H  I ++G +   N
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253

Query: 296 LCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKG 355
           L N+L+SMYSRCG +DKAY+VF  M E+NVVSW+A+ISGL+MNG G+EAIEAF  M K G
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313

Query: 356 VEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQ-EFMIVPTVHHYGCMVDLLGRAGMLDQ 415
           + P++ T T +LSACSH GLV EGM FFDRMR  EF I P +HHYGC+VDLLGRA +LD+
Sbjct: 314 ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDK 373

Query: 416 AYQLVMSMEVNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSS 475
           AY L+ SME+ PD+T+WRTLLGACR+HG   LGER+I HLIELK++EAGDYVLLLN YS+
Sbjct: 374 AYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYST 433

Query: 476 AGNWVKVTELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQ 535
            G W KVTELR  MKE+ I+T PGC+ IEL G VHEF VDD+SHP K++IY+ L EIN+Q
Sbjct: 434 VGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQ 493

Query: 536 LKIAGYEAEISSELHNLKA-EDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMD 595
           LKIAGY AEI+SELHNL++ E+KGYAL +HSEKLAIAFG+L TPPG TIRV  NLRTC+D
Sbjct: 494 LKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVD 553

Query: 596 CHNFAKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 629
           CHNFAK+VS VY+R V+VRDRSRFHHF+ G CSCND+W
Sbjct: 554 CHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591

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BLAST of CmoCh10G002080 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 463.0 bits (1190), Expect = 5.4e-129
Identity = 243/596 (40.77%), Postives = 366/596 (61.41%), Query Frame = 0


Query: 40  SKFREQNSTLRFDREPLISLIKS--CTHKSQLLQIHAHMIRTSF-IQDPIVSLRFLTRIV 99
           S F E +  L    E  I+L+++   +  ++L QIHA  IR    I D  +    +  +V
Sbjct: 2   SPFSETSVLLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLV 61

Query: 100 SAPF-RELGYSRRFFSQLTNPF-VSHYNTLLRAYSLSRSPLEGLYMYRDMERRG-VHADP 159
           S P    + Y+ + FS++  P  V  +NTL+R Y+   + +    +YR+M   G V  D 
Sbjct: 62  SLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDT 121

Query: 160 LSSSFAVKSCIRMLSLFSGVQIHARIFRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDE 219
            +  F +K+   M  +  G  IH+ + R+G  S   +  S++ LY++CG +  A K+FD+
Sbjct: 122 HTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDK 181

Query: 220 IPQRDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCKPDKVTCLLLLQACADLNALE 279
           +P++D+VAWN +I+    N +  +AL L+  M S     KPD  T + LL ACA + AL 
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG--IKPDGFTIVSLLSACAKIGALT 241

Query: 280 FGERIHSHIQQHGYNTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLS 339
            G+R+H ++ + G     +  N L+ +Y+RCGRV++A  +FD+M +KN VSW+++I GL+
Sbjct: 242 LGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 301

Query: 340 MNGHGREAIEAFWAMQK-KGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPT 399
           +NG G+EAIE F  M+  +G+ P + TF  +L ACSHCG+V EG  +F RMR+E+ I P 
Sbjct: 302 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPR 361

Query: 400 VHHYGCMVDLLGRAGMLDQAYQLVMSMEVNPDATMWRTLLGACRIHGHANLGERIIEHLI 459
           + H+GCMVDLL RAG + +AY+ + SM + P+  +WRTLLGAC +HG ++L E     ++
Sbjct: 362 IEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQIL 421

Query: 460 ELKSQEAGDYVLLLNIYSSAGNWVKVTELRKFMKERGIYTTPGCTTIELNGVVHEFAVDD 519
           +L+   +GDYVLL N+Y+S   W  V ++RK M   G+   PG + +E+   VHEF + D
Sbjct: 422 QLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGD 481

Query: 520 ISHPMKDKIYEQLDEINKQLKIAGYEAEISSELHNLKAEDKGYALSFHSEKLAIAFGVLA 579
            SHP  D IY +L E+  +L+  GY  +IS+   +++ E+K  A+ +HSEK+AIAF +++
Sbjct: 482 KSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLIS 541

Query: 580 TPPGRTIRVANNLRTCMDCHNFAKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 629
           TP    I V  NLR C DCH   K VS VYNR++VVRDRSRFHHF+ G CSC DYW
Sbjct: 542 TPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

[Close]

BLAST of CmoCh10G002080 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 2.3e-124
Identity = 212/526 (40.30%), Postives = 333/526 (63.31%), Query Frame = 0


Query: 106 SRRFFSQLTNPFVSHYNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIR 165
           +++ F ++    V  +N ++  Y+ + +  E L +++DM +  V  D  +    V +C +
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278

Query: 166 MLSLFSGVQIHARIFRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVL 225
             S+  G Q+H  I  +G  S+  ++ +++DLYS CG+LE AC LF+ +P +DV++WN L
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338

Query: 226 ISCLTRNKRTRDALGLF-EIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQ 285
           I   T     ++AL LF E+++S      P+ VT L +L ACA L A++ G  IH +I +
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGE---TPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 398

Query: 286 H--GYNTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAI 345
              G    S+L  SLI MY++CG ++ A++VF+ +  K++ SW+AMI G +M+G    + 
Sbjct: 399 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 458

Query: 346 EAFWAMQKKGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDL 405
           + F  M+K G++PDD TF  +LSACSH G++D G   F  M Q++ + P + HYGCM+DL
Sbjct: 459 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 518

Query: 406 LGRAGMLDQAYQLVMSMEVNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDY 465
           LG +G+  +A +++  ME+ PD  +W +LL AC++HG+  LGE   E+LI+++ +  G Y
Sbjct: 519 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 578

Query: 466 VLLLNIYSSAGNWVKVTELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIY 525
           VLL NIY+SAG W +V + R  + ++G+   PGC++IE++ VVHEF + D  HP   +IY
Sbjct: 579 VLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 638

Query: 526 EQLDEINKQLKIAGYEAEISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVA 585
             L+E+   L+ AG+  + S  L  ++ E K  AL  HSEKLAIAFG+++T PG  + + 
Sbjct: 639 GMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIV 698

Query: 586 NNLRTCMDCHNFAKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 629
            NLR C +CH   K +S +Y R+++ RDR+RFHHFR+G CSCNDYW
Sbjct: 699 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

[Close]

BLAST of CmoCh10G002080 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 3.1e-124
Identity = 229/605 (37.85%), Postives = 361/605 (59.67%), Query Frame = 0


Query: 59  LIKSCTHKSQL---LQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTN 118
           LIK+    S L     +H   ++++   D  V+   +    S    +L  + + F+ +  
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSC--GDLDSACKVFTTIKE 196

Query: 119 PFVSHYNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQI 178
             V  +N+++  +    SP + L +++ ME   V A  ++    + +C ++ +L  G Q+
Sbjct: 197 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 256

Query: 179 HARIFRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFD----------------------- 238
            + I  N    +  L  +M+D+Y+ CG +EDA +LFD                       
Sbjct: 257 CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 316

Query: 239 --------EIPQRDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCKPDKVTCLLLLQ 298
                    +PQ+D+VAWN LIS   +N +  +AL +F  +Q    + K +++T +  L 
Sbjct: 317 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM-KLNQITLVSTLS 376

Query: 299 ACADLNALEFGERIHSHIQQHGYNTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVS 358
           ACA + ALE G  IHS+I++HG     ++ ++LI MYS+CG ++K+ EVF+ + +++V  
Sbjct: 377 ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFV 436

Query: 359 WSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMR 418
           WSAMI GL+M+G G EA++ F+ MQ+  V+P+  TFT V  ACSH GLVDE  + F +M 
Sbjct: 437 WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 496

Query: 419 QEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSMEVNPDATMWRTLLGACRIHGHANLG 478
             + IVP   HY C+VD+LGR+G L++A + + +M + P  ++W  LLGAC+IH + NL 
Sbjct: 497 SNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 556

Query: 479 ERIIEHLIELKSQEAGDYVLLLNIYSSAGNWVKVTELRKFMKERGIYTTPGCTTIELNGV 538
           E     L+EL+ +  G +VLL NIY+  G W  V+ELRK M+  G+   PGC++IE++G+
Sbjct: 557 EMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGM 616

Query: 539 VHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAEISSELHNLKAED-KGYALSFHSEK 598
           +HEF   D +HPM +K+Y +L E+ ++LK  GYE EIS  L  ++ E+ K  +L+ HSEK
Sbjct: 617 IHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEK 676

Query: 599 LAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVSSVYNRKVVVRDRSRFHHFREGRCS 629
           LAI +G+++T   + IRV  NLR C DCH+ AK +S +Y+R+++VRDR RFHHFR G+CS
Sbjct: 677 LAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCS 736

[Close]

BLAST of CmoCh10G002080 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.0e-123
Identity = 227/623 (36.44%), Postives = 361/623 (57.95%), Query Frame = 0


Query: 56  LISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPF--RELGYSRRFFSQL 115
           L   I +C     L QIHA  I++  ++D + +   L    ++    R+L Y+ + F+Q+
Sbjct: 26  LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85

Query: 116 TNPFVSHYNTLLRAYSLS---RSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLF 175
                  +NT++R +S S   ++ +     Y  M    V  +  +    +K+C +   + 
Sbjct: 86  PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145

Query: 176 SGVQIHARIFRNGHQSDSLLLTSMMDLYSHCGKLEDA----------------------- 235
            G QIH    + G   D  ++++++ +Y  CG ++DA                       
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205

Query: 236 ------------------CK----LFDEIPQRDVVAWNVLISCLTRNKRTRDALGLFEIM 295
                             CK    LFD++ QR VV+WN +IS  + N   +DA+ +F  M
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265

Query: 296 QSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISMYSRCG 355
           +      +P+ VT + +L A + L +LE GE +H + +  G   +  L ++LI MYS+CG
Sbjct: 266 KKGD--IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 325

Query: 356 RVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTFTAVLS 415
            ++KA  VF+++P +NV++WSAMI+G +++G   +AI+ F  M++ GV P D  +  +L+
Sbjct: 326 IIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 385

Query: 416 ACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSMEVNPDA 475
           ACSH GLV+EG  +F +M     + P + HYGCMVDLLGR+G+LD+A + +++M + PD 
Sbjct: 386 ACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDD 445

Query: 476 TMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWVKVTELRKFM 535
            +W+ LLGACR+ G+  +G+R+   L+++   ++G YV L N+Y+S GNW +V+E+R  M
Sbjct: 446 VIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRM 505

Query: 536 KERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAEISSEL 595
           KE+ I   PGC+ I+++GV+HEF V+D SHP   +I   L EI+ +L++AGY    +  L
Sbjct: 506 KEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVL 565

Query: 596 HNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVSSVYNRK 629
            NL+ EDK   L +HSEK+A AFG+++T PG+ IR+  NLR C DCH+  K +S VY RK
Sbjct: 566 LNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRK 625

[Close]

BLAST of CmoCh10G002080 vs. ExPASy TrEMBL
Match: A0A6J1E1Z3 (pentatricopeptide repeat-containing protein At3g47530 OS=Cucurbita moschata OX=3662 GN=LOC111429841 PE=3 SV=1)

HSP 1 Score: 1285.4 bits (3325), Expect = 0.0e+00
Identity = 628/628 (100.00%), Postives = 628/628 (100.00%), Query Frame = 0


Query: 1   MTVIFRRCRCSADRHLHSLRLPHFASTASLLHSPISLLSSKFREQNSTLRFDREPLISLI 60
           MTVIFRRCRCSADRHLHSLRLPHFASTASLLHSPISLLSSKFREQNSTLRFDREPLISLI
Sbjct: 1   MTVIFRRCRCSADRHLHSLRLPHFASTASLLHSPISLLSSKFREQNSTLRFDREPLISLI 60

Query: 61  KSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSH 120
           KSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSH
Sbjct: 61  KSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSH 120

Query: 121 YNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQIHARIF 180
           YNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQIHARIF
Sbjct: 121 YNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQIHARIF 180

Query: 181 RNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALG 240
           RNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALG
Sbjct: 181 RNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALG 240

Query: 241 LFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISM 300
           LFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISM
Sbjct: 241 LFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISM 300

Query: 301 YSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTF 360
           YSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTF
Sbjct: 301 YSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTF 360

Query: 361 TAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSME 420
           TAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSME
Sbjct: 361 TAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSME 420

Query: 421 VNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWVKVTE 480
           VNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWVKVTE
Sbjct: 421 VNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWVKVTE 480

Query: 481 LRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAE 540
           LRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAE
Sbjct: 481 LRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAE 540

Query: 541 ISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVSS 600
           ISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVSS
Sbjct: 541 ISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVSS 600

Query: 601 VYNRKVVVRDRSRFHHFREGRCSCNDYW 629
           VYNRKVVVRDRSRFHHFREGRCSCNDYW
Sbjct: 601 VYNRKVVVRDRSRFHHFREGRCSCNDYW 628

[Close]

BLAST of CmoCh10G002080 vs. ExPASy TrEMBL
Match: A0A6J1JDE8 (pentatricopeptide repeat-containing protein At3g47530 OS=Cucurbita maxima OX=3661 GN=LOC111484807 PE=3 SV=1)

HSP 1 Score: 1256.5 bits (3250), Expect = 0.0e+00
Identity = 611/628 (97.29%), Postives = 622/628 (99.04%), Query Frame = 0


Query: 1   MTVIFRRCRCSADRHLHSLRLPHFASTASLLHSPISLLSSKFREQNSTLRFDREPLISLI 60
           MTVIFRRCRCSA RH HSLRLP FASTASLLHSPISLLSSKFR+QNSTL FDREPLISLI
Sbjct: 1   MTVIFRRCRCSAYRHPHSLRLPRFASTASLLHSPISLLSSKFRQQNSTLHFDREPLISLI 60

Query: 61  KSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSH 120
           KSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSH
Sbjct: 61  KSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSH 120

Query: 121 YNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQIHARIF 180
           YNTLLRAYSLSRSPLEGLYMYRDMER+GVHADPLSSSFA+KSCIRMLSLFSG+QIHARIF
Sbjct: 121 YNTLLRAYSLSRSPLEGLYMYRDMERQGVHADPLSSSFALKSCIRMLSLFSGIQIHARIF 180

Query: 181 RNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALG 240
           RNGHQSDSLLLTSMMDLYSHCGKL+DACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALG
Sbjct: 181 RNGHQSDSLLLTSMMDLYSHCGKLKDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALG 240

Query: 241 LFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISM 300
           LFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISM
Sbjct: 241 LFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISM 300

Query: 301 YSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTF 360
           YSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTF
Sbjct: 301 YSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTF 360

Query: 361 TAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSME 420
           TAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSME
Sbjct: 361 TAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSME 420

Query: 421 VNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWVKVTE 480
           VNPDATMWRTLLGACRIHGHANLGER+IEHL+ELKSQEAGDYVLLLNIYSSAGNW KVTE
Sbjct: 421 VNPDATMWRTLLGACRIHGHANLGERVIEHLVELKSQEAGDYVLLLNIYSSAGNWDKVTE 480

Query: 481 LRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAE 540
           LRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIY+QLDEIN+QLKIAGYEAE
Sbjct: 481 LRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINQQLKIAGYEAE 540

Query: 541 ISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVSS 600
           ISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPG TIRVANNLRTC+DCHNFAKYVSS
Sbjct: 541 ISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGGTIRVANNLRTCLDCHNFAKYVSS 600

Query: 601 VYNRKVVVRDRSRFHHFREGRCSCNDYW 629
           VYNRKVVVRDRS+FHHFREGRCSCNDYW
Sbjct: 601 VYNRKVVVRDRSQFHHFREGRCSCNDYW 628

[Close]

BLAST of CmoCh10G002080 vs. ExPASy TrEMBL
Match: A0A6J1C487 (pentatricopeptide repeat-containing protein At3g47530 OS=Momordica charantia OX=3673 GN=LOC111007242 PE=3 SV=1)

HSP 1 Score: 1122.8 bits (2903), Expect = 0.0e+00
Identity = 548/634 (86.44%), Postives = 584/634 (92.11%), Query Frame = 0


Query: 1   MTVIFRRCRCSADRH-LHSLRLPHFASTASLLHSPISLLSSKFREQNSTLRF-----DRE 60
           M V+FR+       +  H + LP FASTASLLHSP SL+SSKFR+ NST RF     +RE
Sbjct: 1   MKVVFRQFLLRRSLNPQHHISLPRFASTASLLHSPKSLISSKFRQHNSTTRFSNAPIERE 60

Query: 61  PLISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLT 120
           PLISLIKSCTHK QLLQIHAH+IRTS I+DPI++LRFLTR  +APFREL YSRRFFSQLT
Sbjct: 61  PLISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPFRELDYSRRFFSQLT 120

Query: 121 NPFVSHYNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQ 180
           NP VSHYN +LRAYSLSRSP +GLY+YRDMER+G+ ADPLSSSFA+KSCIR+ SL SGVQ
Sbjct: 121 NPSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGIRADPLSSSFAIKSCIRIFSLLSGVQ 180

Query: 181 IHARIFRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKR 240
           IHARIFRNGHQSDSLLLT+MMDLYSHCGKLE+ACKLFDEIPQRDVVAWNVLISCLTRNKR
Sbjct: 181 IHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTRNKR 240

Query: 241 TRDALGLFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLC 300
           TRDALGLFEIMQSPTYLC+PDKVTCLLLLQACADLNALEFGERIHS+IQ+ GY+TESNLC
Sbjct: 241 TRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLC 300

Query: 301 NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVE 360
           NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSA+ISGLSMNGHGREAIEAFW MQK G+E
Sbjct: 301 NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAIISGLSMNGHGREAIEAFWEMQKMGIE 360

Query: 361 PDDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQ 420
           PDD TFT VLSACSHCGLVDEGMAFFDRMR EF I P VHHYGCMVDLLGRAGMLDQAYQ
Sbjct: 361 PDDRTFTGVLSACSHCGLVDEGMAFFDRMR-EFKIAPNVHHYGCMVDLLGRAGMLDQAYQ 420

Query: 421 LVMSMEVNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGN 480
           L MSME+NPDAT+WRTLLGAC+IHGH NLGE II HLIE KSQEAGDYVLLLNIYSSAGN
Sbjct: 421 LAMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSSAGN 480

Query: 481 WVKVTELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKI 540
           W KVTELRKFMKE GIYTTP CTTIELNGVVHEFAVDD+SHPMKD+IYEQLDEINKQLKI
Sbjct: 481 WDKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDEINKQLKI 540

Query: 541 AGYEAEISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNF 600
           AGYE+EISSELHNLKAE+KGYALS HSEKLAIAFGVLATPPGRTIRVANN+RTC+DCHNF
Sbjct: 541 AGYESEISSELHNLKAEEKGYALSCHSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNF 600

Query: 601 AKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 629
           AKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW
Sbjct: 601 AKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 633

[Close]

BLAST of CmoCh10G002080 vs. ExPASy TrEMBL
Match: A0A0A0LUH9 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009750 PE=3 SV=1)

HSP 1 Score: 1091.6 bits (2822), Expect = 0.0e+00
Identity = 527/600 (87.83%), Postives = 561/600 (93.50%), Query Frame = 0


Query: 30  LLHSPISLLSSKFREQN-STLRFDREPLISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVS 89
           +  SP S+LS K+   + S   F+REPLISLIKSCTHKSQLLQIHAH+I TS IQDPIVS
Sbjct: 4   IFRSP-SILSLKYHHHSISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTSSIQDPIVS 63

Query: 90  LRFLTRIVSAPFRELGYSRRFFSQLTNPFVSHYNTLLRAYSLSRSPLEGLYMYRDMERRG 149
           LRFLTR  SAPFR+LGYSRR F  LTNPFVSHYN +LRAYSLSRSPLEGLYMYRDMER+G
Sbjct: 64  LRFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQG 123

Query: 150 VHADPLSSSFAVKSCIRMLSLFSGVQIHARIFRNGHQSDSLLLTSMMDLYSHCGKLEDAC 209
           V ADPLSSSFAVKSCI++LSL  G+QIHARIF NGHQ+DSLLLTSMMDLYSHCGK E+AC
Sbjct: 124 VRADPLSSSFAVKSCIKLLSLLFGIQIHARIFINGHQADSLLLTSMMDLYSHCGKPEEAC 183

Query: 210 KLFDEIPQRDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCKPDKVTCLLLLQACAD 269
           KLFDE+PQ+DVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLC+PDKVTCLLLLQACAD
Sbjct: 184 KLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACAD 243

Query: 270 LNALEFGERIHSHIQQHGYNTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAM 329
           LNALEFGERIH +IQQHGYNTESNLCNSLISMYSRCGR+DKAYEVFDKM EKNVVSWSAM
Sbjct: 244 LNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAM 303

Query: 330 ISGLSMNGHGREAIEAFWAMQKKGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFM 389
           ISGLSMNGHGREAIEAFW MQK GVEP DHTFTAVLSACSHCGLVDEGMAFFDRMRQEFM
Sbjct: 304 ISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFM 363

Query: 390 IVPTVHHYGCMVDLLGRAGMLDQAYQLVMSMEVNPDATMWRTLLGACRIHGHANLGERII 449
           I P VHHYGC+VDLLGRAGMLDQAY+L+MSMEV PDATMWRTLLGACRIHGH NLGERI+
Sbjct: 364 IAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIV 423

Query: 450 EHLIELKSQEAGDYVLLLNIYSSAGNWVKVTELRKFMKERGIYTTPGCTTIELNGVVHEF 509
           EHLIELKSQEAGDYVLLLNIYSSAGNW KVTELRK MKE+GIYTTP CTTIELNGVVH+F
Sbjct: 424 EHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQF 483

Query: 510 AVDDISHPMKDKIYEQLDEINKQLKIAGYEAEISSELHNLKAEDKGYALSFHSEKLAIAF 569
           AVDDISHPMKDKIY+QLDEINKQLKIAGYEAE+SSELH L+ +DKGYALS HSEKLAIAF
Sbjct: 484 AVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAIAF 543

Query: 570 GVLATPPGRTIRVANNLRTCMDCHNFAKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 629
           GVLATPPGRTIR+ANN+RTCMDCHNFAKY+SSVYNRKVVVRDRSRFHHF+EGRCSCND+W
Sbjct: 544 GVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 602

[Close]

BLAST of CmoCh10G002080 vs. ExPASy TrEMBL
Match: A0A1S3BV40 (pentatricopeptide repeat-containing protein At3g47530 OS=Cucumis melo OX=3656 GN=LOC103493993 PE=3 SV=1)

HSP 1 Score: 1076.6 bits (2783), Expect = 0.0e+00
Identity = 517/573 (90.23%), Postives = 544/573 (94.94%), Query Frame = 0


Query: 56  LISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTN 115
           LISLIKSCTHKSQLLQIHAH+IRTS IQDPIVSLRFLTR  SAPFR+LGYSRRF   LTN
Sbjct: 13  LISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRDLGYSRRFLDLLTN 72

Query: 116 PFVSHYNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQI 175
           P VSHYN +LRAYS+SRSPLEGLY+YRDMER+GV ADPLSSSFAVKSCI++LSL  G+QI
Sbjct: 73  PLVSHYNAMLRAYSVSRSPLEGLYVYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQI 132

Query: 176 HARIFRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRT 235
           HARIF  GHQ+DSLLLTSMMDLYSHCGK E+ACKLFDE+PQ+DVVAWNVLISCLTRNKRT
Sbjct: 133 HARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRT 192

Query: 236 RDALGLFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCN 295
           RDALGLFEIMQSPTYLC+PDKVTCLLLLQACADLNALEFGERIH +IQQH YNTESNLCN
Sbjct: 193 RDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHCYNTESNLCN 252

Query: 296 SLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEP 355
           SLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFW MQK GVEP
Sbjct: 253 SLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEP 312

Query: 356 DDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQL 415
           DDHTFTAVLSACSHCGLVDEGMAFFDRMRQE MI P VHHYGC+VDLLGRAGMLDQAY+L
Sbjct: 313 DDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQAYEL 372

Query: 416 VMSMEVNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNW 475
           +MSMEV PDATMWRTLLGACRIHGHANLGERI+EHLIELKSQEAGDYVLLLNIYSSAG W
Sbjct: 373 IMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSSAGKW 432

Query: 476 VKVTELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIA 535
            KVTELRK MKE+GIYTTP CTTIELNGVVHEFAVDDISHPMKDKIY+QLDEINKQLKIA
Sbjct: 433 DKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQLKIA 492

Query: 536 GYEAEISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFA 595
           GYEAE+SSELH LK EDKGYALS HSEKLAIAFGVLATPPGRTIRVANN+RTCMDCHNFA
Sbjct: 493 GYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMDCHNFA 552

Query: 596 KYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 629
           KY+SSVYNRKVV+RDRSRFHHF+EGRCSCND+W
Sbjct: 553 KYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW 585

[Close]

BLAST of CmoCh10G002080 vs. NCBI nr
Match: XP_022921651.1 (pentatricopeptide repeat-containing protein At3g47530 [Cucurbita moschata])

HSP 1 Score: 1285.4 bits (3325), Expect = 0.0e+00
Identity = 628/628 (100.00%), Postives = 628/628 (100.00%), Query Frame = 0


Query: 1   MTVIFRRCRCSADRHLHSLRLPHFASTASLLHSPISLLSSKFREQNSTLRFDREPLISLI 60
           MTVIFRRCRCSADRHLHSLRLPHFASTASLLHSPISLLSSKFREQNSTLRFDREPLISLI
Sbjct: 1   MTVIFRRCRCSADRHLHSLRLPHFASTASLLHSPISLLSSKFREQNSTLRFDREPLISLI 60

Query: 61  KSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSH 120
           KSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSH
Sbjct: 61  KSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSH 120

Query: 121 YNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQIHARIF 180
           YNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQIHARIF
Sbjct: 121 YNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQIHARIF 180

Query: 181 RNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALG 240
           RNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALG
Sbjct: 181 RNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALG 240

Query: 241 LFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISM 300
           LFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISM
Sbjct: 241 LFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISM 300

Query: 301 YSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTF 360
           YSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTF
Sbjct: 301 YSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTF 360

Query: 361 TAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSME 420
           TAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSME
Sbjct: 361 TAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSME 420

Query: 421 VNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWVKVTE 480
           VNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWVKVTE
Sbjct: 421 VNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWVKVTE 480

Query: 481 LRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAE 540
           LRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAE
Sbjct: 481 LRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAE 540

Query: 541 ISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVSS 600
           ISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVSS
Sbjct: 541 ISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVSS 600

Query: 601 VYNRKVVVRDRSRFHHFREGRCSCNDYW 629
           VYNRKVVVRDRSRFHHFREGRCSCNDYW
Sbjct: 601 VYNRKVVVRDRSRFHHFREGRCSCNDYW 628

[Close]

BLAST of CmoCh10G002080 vs. NCBI nr
Match: KAG6589508.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023195.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1278.1 bits (3306), Expect = 0.0e+00
Identity = 624/628 (99.36%), Postives = 626/628 (99.68%), Query Frame = 0


Query: 1   MTVIFRRCRCSADRHLHSLRLPHFASTASLLHSPISLLSSKFREQNSTLRFDREPLISLI 60
           MTVIFRRCRCSADRHLHSLRLP FASTASLLHSPISLLSSKFREQNSTLRFDREPLISLI
Sbjct: 1   MTVIFRRCRCSADRHLHSLRLPRFASTASLLHSPISLLSSKFREQNSTLRFDREPLISLI 60

Query: 61  KSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSH 120
           KSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSH
Sbjct: 61  KSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSH 120

Query: 121 YNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQIHARIF 180
           YNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQIHARIF
Sbjct: 121 YNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQIHARIF 180

Query: 181 RNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALG 240
           RNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALG
Sbjct: 181 RNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALG 240

Query: 241 LFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISM 300
           LFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISM
Sbjct: 241 LFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISM 300

Query: 301 YSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTF 360
           YSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTF
Sbjct: 301 YSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTF 360

Query: 361 TAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSME 420
           TAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSME
Sbjct: 361 TAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSME 420

Query: 421 VNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWVKVTE 480
           VNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNW KVTE
Sbjct: 421 VNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTE 480

Query: 481 LRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAE 540
           LRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAE
Sbjct: 481 LRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAE 540

Query: 541 ISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVSS 600
           ISSELHNLKAEDKGYALS+HSEKLAIAFG+LATPPGRTIRVANNLRTCMDCHNFAKYVSS
Sbjct: 541 ISSELHNLKAEDKGYALSYHSEKLAIAFGILATPPGRTIRVANNLRTCMDCHNFAKYVSS 600

Query: 601 VYNRKVVVRDRSRFHHFREGRCSCNDYW 629
           VYNRKVVVRDRSRFHHFREGRCSCNDYW
Sbjct: 601 VYNRKVVVRDRSRFHHFREGRCSCNDYW 628

[Close]

BLAST of CmoCh10G002080 vs. NCBI nr
Match: XP_023515406.1 (pentatricopeptide repeat-containing protein At3g47530 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1265.8 bits (3274), Expect = 0.0e+00
Identity = 618/628 (98.41%), Postives = 625/628 (99.52%), Query Frame = 0


Query: 1   MTVIFRRCRCSADRHLHSLRLPHFASTASLLHSPISLLSSKFREQNSTLRFDREPLISLI 60
           MTVIFRRCRCSADRHLHSLRLP FASTASLLHSPISLLSSKFREQNSTLRFDREPLISLI
Sbjct: 1   MTVIFRRCRCSADRHLHSLRLPRFASTASLLHSPISLLSSKFREQNSTLRFDREPLISLI 60

Query: 61  KSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSH 120
           KSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSH
Sbjct: 61  KSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSH 120

Query: 121 YNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQIHARIF 180
           YNTLLRAYSLSRSPLEGLYMYRDMER+GVHADPLSSSFAVKSCIRMLSLFSG+QIHARIF
Sbjct: 121 YNTLLRAYSLSRSPLEGLYMYRDMERQGVHADPLSSSFAVKSCIRMLSLFSGIQIHARIF 180

Query: 181 RNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALG 240
           RNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALG
Sbjct: 181 RNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALG 240

Query: 241 LFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISM 300
           LFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHS+IQQ+ YNTESNLCNSLISM
Sbjct: 241 LFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSYIQQNDYNTESNLCNSLISM 300

Query: 301 YSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTF 360
           YSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTF
Sbjct: 301 YSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTF 360

Query: 361 TAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSME 420
           TAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSME
Sbjct: 361 TAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSME 420

Query: 421 VNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWVKVTE 480
           VNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNW KVTE
Sbjct: 421 VNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTE 480

Query: 481 LRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAE 540
           LRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIY+QLDEIN+QLKIAGYEAE
Sbjct: 481 LRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINQQLKIAGYEAE 540

Query: 541 ISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVSS 600
           ISSELHNLKAEDKGYALS+HSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVSS
Sbjct: 541 ISSELHNLKAEDKGYALSYHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVSS 600

Query: 601 VYNRKVVVRDRSRFHHFREGRCSCNDYW 629
           VYNRKVVVRDRSRFHHFREGRCSCNDYW
Sbjct: 601 VYNRKVVVRDRSRFHHFREGRCSCNDYW 628

[Close]

BLAST of CmoCh10G002080 vs. NCBI nr
Match: XP_022987181.1 (pentatricopeptide repeat-containing protein At3g47530 [Cucurbita maxima])

HSP 1 Score: 1256.5 bits (3250), Expect = 0.0e+00
Identity = 611/628 (97.29%), Postives = 622/628 (99.04%), Query Frame = 0


Query: 1   MTVIFRRCRCSADRHLHSLRLPHFASTASLLHSPISLLSSKFREQNSTLRFDREPLISLI 60
           MTVIFRRCRCSA RH HSLRLP FASTASLLHSPISLLSSKFR+QNSTL FDREPLISLI
Sbjct: 1   MTVIFRRCRCSAYRHPHSLRLPRFASTASLLHSPISLLSSKFRQQNSTLHFDREPLISLI 60

Query: 61  KSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSH 120
           KSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSH
Sbjct: 61  KSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSH 120

Query: 121 YNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQIHARIF 180
           YNTLLRAYSLSRSPLEGLYMYRDMER+GVHADPLSSSFA+KSCIRMLSLFSG+QIHARIF
Sbjct: 121 YNTLLRAYSLSRSPLEGLYMYRDMERQGVHADPLSSSFALKSCIRMLSLFSGIQIHARIF 180

Query: 181 RNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALG 240
           RNGHQSDSLLLTSMMDLYSHCGKL+DACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALG
Sbjct: 181 RNGHQSDSLLLTSMMDLYSHCGKLKDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALG 240

Query: 241 LFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISM 300
           LFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISM
Sbjct: 241 LFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISM 300

Query: 301 YSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTF 360
           YSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTF
Sbjct: 301 YSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTF 360

Query: 361 TAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSME 420
           TAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSME
Sbjct: 361 TAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSME 420

Query: 421 VNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWVKVTE 480
           VNPDATMWRTLLGACRIHGHANLGER+IEHL+ELKSQEAGDYVLLLNIYSSAGNW KVTE
Sbjct: 421 VNPDATMWRTLLGACRIHGHANLGERVIEHLVELKSQEAGDYVLLLNIYSSAGNWDKVTE 480

Query: 481 LRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAE 540
           LRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIY+QLDEIN+QLKIAGYEAE
Sbjct: 481 LRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINQQLKIAGYEAE 540

Query: 541 ISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVSS 600
           ISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPG TIRVANNLRTC+DCHNFAKYVSS
Sbjct: 541 ISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGGTIRVANNLRTCLDCHNFAKYVSS 600

Query: 601 VYNRKVVVRDRSRFHHFREGRCSCNDYW 629
           VYNRKVVVRDRS+FHHFREGRCSCNDYW
Sbjct: 601 VYNRKVVVRDRSQFHHFREGRCSCNDYW 628

[Close]

BLAST of CmoCh10G002080 vs. NCBI nr
Match: XP_038879600.1 (pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >XP_038879601.1 pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >XP_038879603.1 pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >XP_038879604.1 pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >XP_038879605.1 pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >XP_038879606.1 pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >XP_038879607.1 pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida])

HSP 1 Score: 1129.8 bits (2921), Expect = 0.0e+00
Identity = 555/628 (88.38%), Postives = 582/628 (92.68%), Query Frame = 0


Query: 1   MTVIFRRCRCSADRHLHSLRLPHFASTASLLHSPISLLSSKFREQNSTLRFDREPLISLI 60
           MT IFRR    + +H H      FAST        SLLSSKFR+QNST   +RE LISLI
Sbjct: 1   MTGIFRRHSILSPKHHHH----RFAST--------SLLSSKFRQQNSTPHLERELLISLI 60

Query: 61  KSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVSH 120
           KSCTHKSQLLQIHAH+IRTS IQDPIVSLRFLTR  SAPFR+LGYSRRFFS LTNPFVSH
Sbjct: 61  KSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRDLGYSRRFFSLLTNPFVSH 120

Query: 121 YNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQIHARIF 180
           YN +LRAYSLS SPL+GLYMYRDMER+GV  DPLSSSFAVKSCIRMLSLFSGVQIHA+IF
Sbjct: 121 YNAMLRAYSLSPSPLKGLYMYRDMERQGVRVDPLSSSFAVKSCIRMLSLFSGVQIHAKIF 180

Query: 181 RNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALG 240
           RNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDV+AWNVLISCLTRNKRTRDALG
Sbjct: 181 RNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVIAWNVLISCLTRNKRTRDALG 240

Query: 241 LFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISM 300
           LF+IMQSPTYLC+PDKVTCLLLLQACADLNALEFGERIH+++QQHGYNTESNLCNSLISM
Sbjct: 241 LFDIMQSPTYLCEPDKVTCLLLLQACADLNALEFGERIHNYVQQHGYNTESNLCNSLISM 300

Query: 301 YSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTF 360
           YS CGRVDKAYEVFDKMPEK+VVSWSAMISGLSMNG GREAIEAFW MQKKG+EPDDHTF
Sbjct: 301 YSLCGRVDKAYEVFDKMPEKDVVSWSAMISGLSMNGQGREAIEAFWEMQKKGIEPDDHTF 360

Query: 361 TAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSME 420
           TAVLSACSHCGLVDEGMAFFDRMRQEF IVP V+HYGCMVDLLGR GMLDQAY+L+MSME
Sbjct: 361 TAVLSACSHCGLVDEGMAFFDRMRQEFRIVPNVYHYGCMVDLLGRTGMLDQAYKLIMSME 420

Query: 421 VNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWVKVTE 480
           VNPDAT+WRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNW KV+E
Sbjct: 421 VNPDATLWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVSE 480

Query: 481 LRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAE 540
           LRKFMKE+GIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYE+LDEINKQLKIAGYEAE
Sbjct: 481 LRKFMKEKGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEKLDEINKQLKIAGYEAE 540

Query: 541 ISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVSS 600
           ISSELH LKAEDKGYALS HSEKLAIAFGVLATPPGRTIRVAN +  CMDCHNFAKY+SS
Sbjct: 541 ISSELHRLKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANTVHICMDCHNFAKYISS 600

Query: 601 VYNRKVVVRDRSRFHHFREGRCSCNDYW 629
           VYNRKVVVRDRSR HHFREGRCSCNDYW
Sbjct: 601 VYNRKVVVRDRSRSHHFREGRCSCNDYW 616

[Close]

BLAST of CmoCh10G002080 vs. TAIR 10
Match: AT3G47530.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 740.3 bits (1910), Expect = 1.2e-213
Identity = 363/578 (62.80%), Postives = 452/578 (78.20%), Query Frame = 0


Query: 56  LISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRI-VSAPFRELGYSRRFFSQLT 115
           L+SLI S T K  L QIHA ++RTS I++  V   FL+R+ +S   R++ YS R FSQ  
Sbjct: 14  LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL 73

Query: 116 NPFVSHYNTLLRAYSLSRSPLEGLYMYRDMERR-GVHADPLSSSFAVKSCIRMLSLFSGV 175
           NP +SH NT++RA+SLS++P EG  ++R + R   + A+PLSSSFA+K CI+   L  G+
Sbjct: 74  NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133

Query: 176 QIHARIFRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNK 235
           QIH +IF +G  SDSLL+T++MDLYS C    DACK+FDEIP+RD V+WNVL SC  RNK
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193

Query: 236 RTRDALGLFEIMQSPTYLC-KPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESN 295
           RTRD L LF+ M++    C KPD VTCLL LQACA+L AL+FG+++H  I ++G +   N
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253

Query: 296 LCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKG 355
           L N+L+SMYSRCG +DKAY+VF  M E+NVVSW+A+ISGL+MNG G+EAIEAF  M K G
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313

Query: 356 VEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQ-EFMIVPTVHHYGCMVDLLGRAGMLDQ 415
           + P++ T T +LSACSH GLV EGM FFDRMR  EF I P +HHYGC+VDLLGRA +LD+
Sbjct: 314 ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDK 373

Query: 416 AYQLVMSMEVNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSS 475
           AY L+ SME+ PD+T+WRTLLGACR+HG   LGER+I HLIELK++EAGDYVLLLN YS+
Sbjct: 374 AYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYST 433

Query: 476 AGNWVKVTELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQ 535
            G W KVTELR  MKE+ I+T PGC+ IEL G VHEF VDD+SHP K++IY+ L EIN+Q
Sbjct: 434 VGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQ 493

Query: 536 LKIAGYEAEISSELHNLKA-EDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMD 595
           LKIAGY AEI+SELHNL++ E+KGYAL +HSEKLAIAFG+L TPPG TIRV  NLRTC+D
Sbjct: 494 LKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVD 553

Query: 596 CHNFAKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 629
           CHNFAK+VS VY+R V+VRDRSRFHHF+ G CSCND+W
Sbjct: 554 CHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591

[Close]

BLAST of CmoCh10G002080 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 463.0 bits (1190), Expect = 3.8e-130
Identity = 243/596 (40.77%), Postives = 366/596 (61.41%), Query Frame = 0


Query: 40  SKFREQNSTLRFDREPLISLIKS--CTHKSQLLQIHAHMIRTSF-IQDPIVSLRFLTRIV 99
           S F E +  L    E  I+L+++   +  ++L QIHA  IR    I D  +    +  +V
Sbjct: 2   SPFSETSVLLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLV 61

Query: 100 SAPF-RELGYSRRFFSQLTNPF-VSHYNTLLRAYSLSRSPLEGLYMYRDMERRG-VHADP 159
           S P    + Y+ + FS++  P  V  +NTL+R Y+   + +    +YR+M   G V  D 
Sbjct: 62  SLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDT 121

Query: 160 LSSSFAVKSCIRMLSLFSGVQIHARIFRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDE 219
            +  F +K+   M  +  G  IH+ + R+G  S   +  S++ LY++CG +  A K+FD+
Sbjct: 122 HTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDK 181

Query: 220 IPQRDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCKPDKVTCLLLLQACADLNALE 279
           +P++D+VAWN +I+    N +  +AL L+  M S     KPD  T + LL ACA + AL 
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG--IKPDGFTIVSLLSACAKIGALT 241

Query: 280 FGERIHSHIQQHGYNTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLS 339
            G+R+H ++ + G     +  N L+ +Y+RCGRV++A  +FD+M +KN VSW+++I GL+
Sbjct: 242 LGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 301

Query: 340 MNGHGREAIEAFWAMQK-KGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPT 399
           +NG G+EAIE F  M+  +G+ P + TF  +L ACSHCG+V EG  +F RMR+E+ I P 
Sbjct: 302 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPR 361

Query: 400 VHHYGCMVDLLGRAGMLDQAYQLVMSMEVNPDATMWRTLLGACRIHGHANLGERIIEHLI 459
           + H+GCMVDLL RAG + +AY+ + SM + P+  +WRTLLGAC +HG ++L E     ++
Sbjct: 362 IEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQIL 421

Query: 460 ELKSQEAGDYVLLLNIYSSAGNWVKVTELRKFMKERGIYTTPGCTTIELNGVVHEFAVDD 519
           +L+   +GDYVLL N+Y+S   W  V ++RK M   G+   PG + +E+   VHEF + D
Sbjct: 422 QLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGD 481

Query: 520 ISHPMKDKIYEQLDEINKQLKIAGYEAEISSELHNLKAEDKGYALSFHSEKLAIAFGVLA 579
            SHP  D IY +L E+  +L+  GY  +IS+   +++ E+K  A+ +HSEK+AIAF +++
Sbjct: 482 KSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLIS 541

Query: 580 TPPGRTIRVANNLRTCMDCHNFAKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 629
           TP    I V  NLR C DCH   K VS VYNR++VVRDRSRFHHF+ G CSC DYW
Sbjct: 542 TPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

[Close]

BLAST of CmoCh10G002080 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 447.6 bits (1150), Expect = 1.7e-125
Identity = 212/526 (40.30%), Postives = 333/526 (63.31%), Query Frame = 0


Query: 106 SRRFFSQLTNPFVSHYNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIR 165
           +++ F ++    V  +N ++  Y+ + +  E L +++DM +  V  D  +    V +C +
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278

Query: 166 MLSLFSGVQIHARIFRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVL 225
             S+  G Q+H  I  +G  S+  ++ +++DLYS CG+LE AC LF+ +P +DV++WN L
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338

Query: 226 ISCLTRNKRTRDALGLF-EIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQ 285
           I   T     ++AL LF E+++S      P+ VT L +L ACA L A++ G  IH +I +
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGE---TPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 398

Query: 286 H--GYNTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAI 345
              G    S+L  SLI MY++CG ++ A++VF+ +  K++ SW+AMI G +M+G    + 
Sbjct: 399 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 458

Query: 346 EAFWAMQKKGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDL 405
           + F  M+K G++PDD TF  +LSACSH G++D G   F  M Q++ + P + HYGCM+DL
Sbjct: 459 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 518

Query: 406 LGRAGMLDQAYQLVMSMEVNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDY 465
           LG +G+  +A +++  ME+ PD  +W +LL AC++HG+  LGE   E+LI+++ +  G Y
Sbjct: 519 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 578

Query: 466 VLLLNIYSSAGNWVKVTELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIY 525
           VLL NIY+SAG W +V + R  + ++G+   PGC++IE++ VVHEF + D  HP   +IY
Sbjct: 579 VLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 638

Query: 526 EQLDEINKQLKIAGYEAEISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVA 585
             L+E+   L+ AG+  + S  L  ++ E K  AL  HSEKLAIAFG+++T PG  + + 
Sbjct: 639 GMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIV 698

Query: 586 NNLRTCMDCHNFAKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 629
            NLR C +CH   K +S +Y R+++ RDR+RFHHFR+G CSCNDYW
Sbjct: 699 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

[Close]

BLAST of CmoCh10G002080 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 447.2 bits (1149), Expect = 2.2e-125
Identity = 229/605 (37.85%), Postives = 361/605 (59.67%), Query Frame = 0


Query: 59  LIKSCTHKSQL---LQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTN 118
           LIK+    S L     +H   ++++   D  V+   +    S    +L  + + F+ +  
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSC--GDLDSACKVFTTIKE 196

Query: 119 PFVSHYNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQI 178
             V  +N+++  +    SP + L +++ ME   V A  ++    + +C ++ +L  G Q+
Sbjct: 197 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 256

Query: 179 HARIFRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFD----------------------- 238
            + I  N    +  L  +M+D+Y+ CG +EDA +LFD                       
Sbjct: 257 CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 316

Query: 239 --------EIPQRDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCKPDKVTCLLLLQ 298
                    +PQ+D+VAWN LIS   +N +  +AL +F  +Q    + K +++T +  L 
Sbjct: 317 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM-KLNQITLVSTLS 376

Query: 299 ACADLNALEFGERIHSHIQQHGYNTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVS 358
           ACA + ALE G  IHS+I++HG     ++ ++LI MYS+CG ++K+ EVF+ + +++V  
Sbjct: 377 ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFV 436

Query: 359 WSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMR 418
           WSAMI GL+M+G G EA++ F+ MQ+  V+P+  TFT V  ACSH GLVDE  + F +M 
Sbjct: 437 WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 496

Query: 419 QEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSMEVNPDATMWRTLLGACRIHGHANLG 478
             + IVP   HY C+VD+LGR+G L++A + + +M + P  ++W  LLGAC+IH + NL 
Sbjct: 497 SNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 556

Query: 479 ERIIEHLIELKSQEAGDYVLLLNIYSSAGNWVKVTELRKFMKERGIYTTPGCTTIELNGV 538
           E     L+EL+ +  G +VLL NIY+  G W  V+ELRK M+  G+   PGC++IE++G+
Sbjct: 557 EMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGM 616

Query: 539 VHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAEISSELHNLKAED-KGYALSFHSEK 598
           +HEF   D +HPM +K+Y +L E+ ++LK  GYE EIS  L  ++ E+ K  +L+ HSEK
Sbjct: 617 IHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEK 676

Query: 599 LAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVSSVYNRKVVVRDRSRFHHFREGRCS 629
           LAI +G+++T   + IRV  NLR C DCH+ AK +S +Y+R+++VRDR RFHHFR G+CS
Sbjct: 677 LAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCS 736

[Close]

BLAST of CmoCh10G002080 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 444.5 bits (1142), Expect = 1.4e-124
Identity = 227/623 (36.44%), Postives = 361/623 (57.95%), Query Frame = 0


Query: 56  LISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPF--RELGYSRRFFSQL 115
           L   I +C     L QIHA  I++  ++D + +   L    ++    R+L Y+ + F+Q+
Sbjct: 26  LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85

Query: 116 TNPFVSHYNTLLRAYSLS---RSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLF 175
                  +NT++R +S S   ++ +     Y  M    V  +  +    +K+C +   + 
Sbjct: 86  PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145

Query: 176 SGVQIHARIFRNGHQSDSLLLTSMMDLYSHCGKLEDA----------------------- 235
            G QIH    + G   D  ++++++ +Y  CG ++DA                       
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205

Query: 236 ------------------CK----LFDEIPQRDVVAWNVLISCLTRNKRTRDALGLFEIM 295
                             CK    LFD++ QR VV+WN +IS  + N   +DA+ +F  M
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265

Query: 296 QSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLISMYSRCG 355
           +      +P+ VT + +L A + L +LE GE +H + +  G   +  L ++LI MYS+CG
Sbjct: 266 KKGD--IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 325

Query: 356 RVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHTFTAVLS 415
            ++KA  VF+++P +NV++WSAMI+G +++G   +AI+ F  M++ GV P D  +  +L+
Sbjct: 326 IIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 385

Query: 416 ACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSMEVNPDA 475
           ACSH GLV+EG  +F +M     + P + HYGCMVDLLGR+G+LD+A + +++M + PD 
Sbjct: 386 ACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDD 445

Query: 476 TMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWVKVTELRKFM 535
            +W+ LLGACR+ G+  +G+R+   L+++   ++G YV L N+Y+S GNW +V+E+R  M
Sbjct: 446 VIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRM 505

Query: 536 KERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAEISSEL 595
           KE+ I   PGC+ I+++GV+HEF V+D SHP   +I   L EI+ +L++AGY    +  L
Sbjct: 506 KEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVL 565

Query: 596 HNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVSSVYNRK 629
            NL+ EDK   L +HSEK+A AFG+++T PG+ IR+  NLR C DCH+  K +S VY RK
Sbjct: 566 LNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRK 625

The following BLAST results are available for this feature:

BLAST of CmoCh10G002080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN85	1.7e-212	62.80	Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana OX...	[more]
A8MQA3	5.4e-129	40.77	Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX...	[more]
Q9LN01	2.3e-124	40.30	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
O82380	3.1e-124	37.85	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q9FI80	2.0e-123	36.44	Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX...	[more]

BLAST of CmoCh10G002080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E1Z3	0.0e+00	100.00	pentatricopeptide repeat-containing protein At3g47530 OS=Cucurbita moschata OX=3...	[more]
A0A6J1JDE8	0.0e+00	97.29	pentatricopeptide repeat-containing protein At3g47530 OS=Cucurbita maxima OX=366...	[more]
A0A6J1C487	0.0e+00	86.44	pentatricopeptide repeat-containing protein At3g47530 OS=Momordica charantia OX=...	[more]
A0A0A0LUH9	0.0e+00	87.83	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G0097...	[more]
A0A1S3BV40	0.0e+00	90.23	pentatricopeptide repeat-containing protein At3g47530 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of CmoCh10G002080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921651.1	0.0e+00	100.00	pentatricopeptide repeat-containing protein At3g47530 [Cucurbita moschata]	[more]
KAG6589508.1	0.0e+00	99.36	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_023515406.1	0.0e+00	98.41	pentatricopeptide repeat-containing protein At3g47530 [Cucurbita pepo subsp. pep...	[more]
XP_022987181.1	0.0e+00	97.29	pentatricopeptide repeat-containing protein At3g47530 [Cucurbita maxima]	[more]
XP_038879600.1	0.0e+00	88.38	pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >...	[more]

BLAST of CmoCh10G002080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47530.1	1.2e-213	62.80	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G21065.1	3.8e-130	40.77	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G08070.1	1.7e-125	40.30	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G29760.1	2.2e-125	37.85	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G48910.1	1.4e-124	36.44	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 40..163 e-value: 4.0E-5 score: 25.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 366..513 e-value: 4.7E-19 score: 70.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 164..272 e-value: 5.0E-20 score: 73.6 coord: 273..365 e-value: 9.6E-28 score: 98.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 217..267 e-value: 8.0E-8 score: 32.4 coord: 320..368 e-value: 3.4E-13 score: 49.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 120..149 e-value: 0.0012 score: 19.0 coord: 395..420 e-value: 0.11 score: 12.8 coord: 462..490 e-value: 0.053 score: 13.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 121..152 e-value: 1.3E-5 score: 23.1 coord: 293..322 e-value: 2.9E-7 score: 28.2 coord: 358..386 e-value: 2.2E-4 score: 19.2 coord: 220..247 e-value: 9.7E-5 score: 20.3 coord: 192..220 e-value: 0.0012 score: 16.9 coord: 323..356 e-value: 2.7E-5 score: 22.1
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 295..317 e-value: 3.8E-6 score: 26.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 321..355 score: 11.564229
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 356..386 score: 9.602157
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 117..151 score: 8.714292
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 290..320 score: 10.369448
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 187..221 score: 9.624079
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 494..618 e-value: 1.1E-36 score: 125.5
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 49..620
None	No IPR available	PANTHER	PTHR47928:SF63	OS08G0434000 PROTEIN	coord: 49..620

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G002080.1	CmoCh10G002080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding