Bhi01G002384 (gene) Wax gourd (B227) v1

Overview


Name	Bhi01G002384
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	60S ribosomal protein L27
Location	chr1: 76121050 .. 76121457 (-)
RNA-Seq Expression	Bhi01G002384
Synteny	Bhi01G002384

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAATTCCTCAAGCCGAACAAAGCCGTCATCATCCTTCAAGGTCGTTACGCCGGCCGGAAGGCGGTCATCATTCGCGCCTTCGACGACGGAACTCGGGATCGGGCTTATGGCCACTGCTTAGTCGCCGGAATCAAAAAGTACCCGGCCAAGGTCATCCGCAAGGACTCCACCAAGAAGACCGCTAAGAAATCCCGAGTCAAGCCCTTCATCAAGCTCGTCAATTACAGGCACCTGATGCCCACCAGGTACACTCTCGATGTCGATCTTAAAGATGTTGTCACTATCGATTCATTGGTATCCAAGGACAAGAAGGTCACCGCCGCCAAAGAGACCAAGAAGAGGTTCGAGGAAAGGTTCAAAACCGGGAAGAACAGGTGGTTTTTCACCAAGCTCAGGTTCTGA

mRNA sequence

ATGGTGAAATTCCTCAAGCCGAACAAAGCCGTCATCATCCTTCAAGGTCGTTACGCCGGCCGGAAGGCGGTCATCATTCGCGCCTTCGACGACGGAACTCGGGATCGGGCTTATGGCCACTGCTTAGTCGCCGGAATCAAAAAGTACCCGGCCAAGGTCATCCGCAAGGACTCCACCAAGAAGACCGCTAAGAAATCCCGAGTCAAGCCCTTCATCAAGCTCGTCAATTACAGGCACCTGATGCCCACCAGGTACACTCTCGATGTCGATCTTAAAGATGTTGTCACTATCGATTCATTGGTATCCAAGGACAAGAAGGTCACCGCCGCCAAAGAGACCAAGAAGAGGTTCGAGGAAAGGTTCAAAACCGGGAAGAACAGGTGGTTTTTCACCAAGCTCAGGTTCTGA

Coding sequence (CDS)

ATGGTGAAATTCCTCAAGCCGAACAAAGCCGTCATCATCCTTCAAGGTCGTTACGCCGGCCGGAAGGCGGTCATCATTCGCGCCTTCGACGACGGAACTCGGGATCGGGCTTATGGCCACTGCTTAGTCGCCGGAATCAAAAAGTACCCGGCCAAGGTCATCCGCAAGGACTCCACCAAGAAGACCGCTAAGAAATCCCGAGTCAAGCCCTTCATCAAGCTCGTCAATTACAGGCACCTGATGCCCACCAGGTACACTCTCGATGTCGATCTTAAAGATGTTGTCACTATCGATTCATTGGTATCCAAGGACAAGAAGGTCACCGCCGCCAAAGAGACCAAGAAGAGGTTCGAGGAAAGGTTCAAAACCGGGAAGAACAGGTGGTTTTTCACCAAGCTCAGGTTCTGA

Protein sequence

MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTKKTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEERFKTGKNRWFFTKLRF

Homology

[Close]

BLAST of Bhi01G002384 vs. TAIR 10
Match: AT3G22230.1 (Ribosomal L27e protein family )

HSP 1 Score: 226.1 bits (575), Expect = 1.7e-59
Identity = 113/135 (83.70%), Postives = 124/135 (91.85%), Query Frame = 0


Query: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60
           MVKFLK NKAVI+LQGRYAG+KAVII++FDDGT DR YGHCLVAG+KKYP+KVIRKDS K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D+L SKDKKVTA KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Bhi01G002384 vs. TAIR 10
Match: AT4G15000.1 (Ribosomal L27e protein family )

HSP 1 Score: 224.6 bits (571), Expect = 4.9e-59
Identity = 112/135 (82.96%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60
           MVKFLK NKAVI+LQGRYAG+KAVII++FDDG RDR YGHCLVAG+KKYP+KVIRKDS K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D+L SKDKKV A KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Bhi01G002384 vs. TAIR 10
Match: AT2G32220.1 (Ribosomal L27e protein family )

HSP 1 Score: 212.2 bits (539), Expect = 2.5e-55
Identity = 102/135 (75.56%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60
           MVK +KP KAVI+LQGRY G+KAVI+++FDDGT ++ YGHCLVAG+KKYP+KVIRKDS K
Sbjct: 1   MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F K++NY+H+MPTRYTLD+DLK+VV+ D++ SKDKKVTA KE K +FEER
Sbjct: 61  KTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Bhi01G002384 vs. TAIR 10
Match: AT4G15000.2 (Ribosomal L27e protein family )

HSP 1 Score: 199.5 bits (506), Expect = 1.7e-51
Identity = 100/123 (81.30%), Postives = 111/123 (90.24%), Query Frame = 0


Query: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60
           MVKFLK NKAVI+LQGRYAG+KAVII++FDDG RDR YGHCLVAG+KKYP+KVIRKDS K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D+L SKDKKV A KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 121 FKT 124
           FKT
Sbjct: 121 FKT 123

[Close]

BLAST of Bhi01G002384 vs. ExPASy Swiss-Prot
Match: Q8LCL3 (60S ribosomal protein L27-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27B PE=2 SV=2)

HSP 1 Score: 226.1 bits (575), Expect = 2.4e-58
Identity = 113/135 (83.70%), Postives = 124/135 (91.85%), Query Frame = 0


Query: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60
           MVKFLK NKAVI+LQGRYAG+KAVII++FDDGT DR YGHCLVAG+KKYP+KVIRKDS K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D+L SKDKKVTA KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Bhi01G002384 vs. ExPASy Swiss-Prot
Match: Q05462 (60S ribosomal protein L27 OS=Pisum sativum OX=3888 GN=RPL27 PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.4e-58
Identity = 112/135 (82.96%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60
           MVKFLKPNKAVI+LQGRYAG+KAVI++ FDDGTR++ YGHCLVAGIKK+P+KVI+KDS K
Sbjct: 1   MVKFLKPNKAVILLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKFPSKVIKKDSAK 60

Query: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F+KLVNY+HLMPTRYTLDVDLKD V  D L SKDKKVTA KETKK  EER
Sbjct: 61  KTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKSLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Bhi01G002384 vs. ExPASy Swiss-Prot
Match: P51419 (60S ribosomal protein L27-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27C PE=2 SV=2)

HSP 1 Score: 224.6 bits (571), Expect = 6.9e-58
Identity = 112/135 (82.96%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60
           MVKFLK NKAVI+LQGRYAG+KAVII++FDDG RDR YGHCLVAG+KKYP+KVIRKDS K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D+L SKDKKV A KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Bhi01G002384 vs. ExPASy Swiss-Prot
Match: Q9SKX8 (60S ribosomal protein L27-1 OS=Arabidopsis thaliana OX=3702 GN=RPL27A PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 3.6e-54
Identity = 102/135 (75.56%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60
           MVK +KP KAVI+LQGRY G+KAVI+++FDDGT ++ YGHCLVAG+KKYP+KVIRKDS K
Sbjct: 1   MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F K++NY+H+MPTRYTLD+DLK+VV+ D++ SKDKKVTA KE K +FEER
Sbjct: 61  KTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Bhi01G002384 vs. ExPASy Swiss-Prot
Match: P41101 (60S ribosomal protein L27 OS=Solanum tuberosum OX=4113 GN=RPL27 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 7.4e-52
Identity = 107/139 (76.98%), Postives = 116/139 (83.45%), Query Frame = 0


Query: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60
           M KFLKPNKAVI+LQG+YAGRKAVI+RAFD+GTRDR YGHCLVAGI +YP KVIRKDS K
Sbjct: 1   MEKFLKPNKAVILLQGKYAGRKAVIVRAFDEGTRDRPYGHCLVAGISRYPKKVIRKDSAK 60

Query: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDL----KDVVTIDSLVSKDKKVTAAKETKKR 120
           K  KKSRVK FIKLVNY H+MPTRYTLD DL    KDVV  D L ++DKKVT A+ TK R
Sbjct: 61  KAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVT-ARRTKAR 120

Query: 121 FEERFKTGKNRWFFTKLRF 136
             ERFKTGKNRWFFTKLRF
Sbjct: 121 LAERFKTGKNRWFFTKLRF 138

[Close]

BLAST of Bhi01G002384 vs. NCBI nr
Match: XP_038874427.1 (60S ribosomal protein L27-2-like [Benincasa hispida])

HSP 1 Score: 263.8 bits (673), Expect = 7.9e-67
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60
           MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK
Sbjct: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60

Query: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Bhi01G002384 vs. NCBI nr
Match: XP_038878671.1 (60S ribosomal protein L27 [Benincasa hispida])

HSP 1 Score: 257.7 bits (657), Expect = 5.6e-65
Identity = 132/135 (97.78%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60
           MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDS K
Sbjct: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNYRHLMPTRYTLDVDLKDVVTIDSL+SKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLLSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Bhi01G002384 vs. NCBI nr
Match: XP_004147740.1 (60S ribosomal protein L27 [Cucumis sativus])

HSP 1 Score: 255.8 bits (652), Expect = 2.1e-64
Identity = 130/135 (96.30%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60
           MVKFLKPNKAVI+LQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDS K
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNYRHLMPTRYTLDVDLKDVVT+DSL SKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Bhi01G002384 vs. NCBI nr
Match: KAE8649234.1 (hypothetical protein Csa_014974 [Cucumis sativus])

HSP 1 Score: 255.8 bits (652), Expect = 2.1e-64
Identity = 130/135 (96.30%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60
           MVKFLKPNKAVI+LQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDS K
Sbjct: 29  MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 88

Query: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNYRHLMPTRYTLDVDLKDVVT+DSL SKDKKVTAAKETKKRFEER
Sbjct: 89  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 148

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 149 FKTGKNRWFFTKLRF 163

[Close]

BLAST of Bhi01G002384 vs. NCBI nr
Match: XP_004147739.1 (60S ribosomal protein L27 [Cucumis sativus] >KGN53499.1 hypothetical protein Csa_014739 [Cucumis sativus])

HSP 1 Score: 255.4 bits (651), Expect = 2.8e-64
Identity = 129/135 (95.56%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60
           MVKFLKPNKAVI+LQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDS K
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIVRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F+KLVNYRHLMPTRYTLDVDLKDVVTIDSL SKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Bhi01G002384 vs. ExPASy TrEMBL
Match: A0A0A0KVB4 (60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G062360 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.0e-64
Identity = 130/135 (96.30%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60
           MVKFLKPNKAVI+LQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDS K
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNYRHLMPTRYTLDVDLKDVVT+DSL SKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Bhi01G002384 vs. ExPASy TrEMBL
Match: A0A0A0KXF9 (60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G061860 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.4e-64
Identity = 129/135 (95.56%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60
           MVKFLKPNKAVI+LQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDS K
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIVRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F+KLVNYRHLMPTRYTLDVDLKDVVTIDSL SKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Bhi01G002384 vs. ExPASy TrEMBL
Match: A0A5A7V5M7 (60S ribosomal protein L27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002210 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.3e-64
Identity = 130/135 (96.30%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60
           MVKFLKPNKAVI+LQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDS K
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNYRHLMPTRYTLDVDLKDVVTIDSL SKDKKV+AAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVSAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Bhi01G002384 vs. ExPASy TrEMBL
Match: A0A1S3BT89 (60S ribosomal protein L27 OS=Cucumis melo OX=3656 GN=LOC103493014 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.3e-64
Identity = 130/135 (96.30%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60
           MVKFLKPNKAVI+LQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDS K
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNYRHLMPTRYTLDVDLKDVVTIDSL SKDKKV+AAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVSAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

[Close]

BLAST of Bhi01G002384 vs. ExPASy TrEMBL
Match: A0A1S3BSF6 (60S ribosomal protein L27 OS=Cucumis melo OX=3656 GN=LOC103493018 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 3.9e-64
Identity = 128/135 (94.81%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 1   MVKFLKPNKAVIILQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSTK 60
           MVKFLKPNKAVI+LQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDS K
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIVRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKPFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLVSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F+KLVNYRHLMPTRYTLDVDLKDVVTIDSL SKDKKV+AAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVSAAKETKKRFEER 120

Query: 121 FKTGKNRWFFTKLRF 136
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135

The following BLAST results are available for this feature:

BLAST of Bhi01G002384 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22230.1	1.7e-59	83.70	Ribosomal L27e protein family	[more]
AT4G15000.1	4.9e-59	82.96	Ribosomal L27e protein family	[more]
AT2G32220.1	2.5e-55	75.56	Ribosomal L27e protein family	[more]
AT4G15000.2	1.7e-51	81.30	Ribosomal L27e protein family	[more]

BLAST of Bhi01G002384 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LCL3	2.4e-58	83.70	60S ribosomal protein L27-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27B PE=2 SV=2	[more]
Q05462	2.4e-58	82.96	60S ribosomal protein L27 OS=Pisum sativum OX=3888 GN=RPL27 PE=2 SV=1	[more]
P51419	6.9e-58	82.96	60S ribosomal protein L27-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27C PE=2 SV=2	[more]
Q9SKX8	3.6e-54	75.56	60S ribosomal protein L27-1 OS=Arabidopsis thaliana OX=3702 GN=RPL27A PE=2 SV=1	[more]
P41101	7.4e-52	76.98	60S ribosomal protein L27 OS=Solanum tuberosum OX=4113 GN=RPL27 PE=2 SV=1	[more]

BLAST of Bhi01G002384 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874427.1	7.9e-67	100.00	60S ribosomal protein L27-2-like [Benincasa hispida]	[more]
XP_038878671.1	5.6e-65	97.78	60S ribosomal protein L27 [Benincasa hispida]	[more]
XP_004147740.1	2.1e-64	96.30	60S ribosomal protein L27 [Cucumis sativus]	[more]
KAE8649234.1	2.1e-64	96.30	hypothetical protein Csa_014974 [Cucumis sativus]	[more]
XP_004147739.1	2.8e-64	95.56	60S ribosomal protein L27 [Cucumis sativus] >KGN53499.1 hypothetical protein Csa...	[more]

BLAST of Bhi01G002384 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVB4	1.0e-64	96.30	60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G062360 PE=3 SV=1	[more]
A0A0A0KXF9	1.4e-64	95.56	60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G061860 PE=3 SV=1	[more]
A0A5A7V5M7	2.3e-64	96.30	60S ribosomal protein L27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BT89	2.3e-64	96.30	60S ribosomal protein L27 OS=Cucumis melo OX=3656 GN=LOC103493014 PE=3 SV=1	[more]
A0A1S3BSF6	3.9e-64	94.81	60S ribosomal protein L27 OS=Cucumis melo OX=3656 GN=LOC103493018 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038655	Ribosomal protein L27e superfamily	GENE3D	2.30.30.770		coord: 1..135 e-value: 1.3E-59 score: 202.1
IPR001141	Ribosomal protein L27e	PFAM	PF01777	Ribosomal_L27e	coord: 52..135 e-value: 2.4E-31 score: 107.9
IPR001141	Ribosomal protein L27e	PANTHER	PTHR10497	60S RIBOSOMAL PROTEIN L27	coord: 1..135
None	No IPR available	PANTHER	PTHR10497:SF16	60S RIBOSOMAL PROTEIN L27	coord: 1..135
IPR018262	Ribosomal protein L27e, conserved site	PROSITE	PS01107	RIBOSOMAL_L27E	coord: 124..135
IPR041991	Eukaryotic Ribosomal Protein L27, KOW domain	CDD	cd06090	KOW_RPL27	coord: 6..88 e-value: 5.00946E-41 score: 129.611
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 2..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M002384	Bhi01M002384	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome