Cmc08g0214351.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc08g0214351.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr08: 4519927 .. 4523834 (-)
Sequence length	896
RNA-Seq Expression	Cmc08g0214351.1
Synteny	Cmc08g0214351.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAACGAAACCCCAAAAAACGATGCTTTTTTTTTTTTTCCTTTCCCCAAACTCGCTCGAATTTGGCCTATAAATTGCATGTGAAATCCATGAAAATGATGATCTCCCCATCTATATGTTTTATAAAAAGAAAAGGAAGAAAGAAAAAAACCCATTTTGATTTAATCGATAAAAACGCGTTTGAAGAACAGAAGAGAAATGTGAAAAGGGCCCTTCACCAGCCACATCGACCTCCATGCCTTTTCTTTTGTCTATATAAATCAAAGTTTTCTTTTCTTTTCTGTTCTTTTCTTTTGTTCTGTAGATGGATGGAGATCAATATAATCAGGTTGGTTCATCACTCAAACAAACAAAAAAAAAAAAATCTCTATTATTATTGTTGTTGTTGTATATATGAGTTTATCTGGTCTTAATCTCCCTCCCATCTTGTTTGAATGATATCATTTGGTTTCAAAATTTAGATATAGAGCCCACTTTTGTAAAAATCGAAAGAGGGTCGAAGAAATTACAAGAGTGCAAATGTGAAACCTTGAGATCTTTCTTGTGGAATTAGAGCAAAATTTTTGGCAGACAGGGCCAAGCCAGGCAGTACAAATGGAAGCTACTACTACTACAACAACAACAACAAAAAAAAAAGTTCTTGATTCAAAGATTCAAGCCATTCTTGCTGATGATCTTAGAAGAATCTGTATGAGTTTTTCTTCTTCTTCTTCTTCTAATTTGGTAATTTAATTTCTTCGAACTTTAATTAATTGTTGGATTATATAATTCATATATATTTATATCGTATATTGATGAAATGTTGTTGGGAATTAGATATTAGATGATAGCGTAGAGAGAGGAGAAAGGGAAAAATTTTCTTTTTTTCTTTTTTGGAATATGAATAATTGGTTTTTTTATTATTATTTTTTAAATTAGGATCAATACCCACAAGACAAATTCTTTTGTTTGCGTGGATTATGATCCAAGCAAGAAAGAAAAAAAAAACACATAAGTAATTAAGTTTCAATTCTGAGTATATAGTTCTCTTTTTTGGTATTTTGCTAAGCTGTAAGGCTTTTTCTTTTTGAAGGATGAAATGAATAAATTGGAACAAAGAGCATTGGATTGTCAGAGAAAAGGAACCAAATTTTAATTTGCATCCAAAGTTTGAGGCTCTAATGTTTTCTAAACCACATTTTTGTTTATGTCGAATATTCTGCTTTCCTTCTTTATATTACTTATTTCTCAACAAATTAAAAATTTAAAAACACCCTTTAAAAACTTTAAATAATTAATTACAAAGCTTGTGCGTAAATTTTAAAATAGTATTAGACTAAAAATGAAGAATTCACGATTTGCTTTATATATCCTAATTGACAATAAGATTCATTTTCTAAACAACAAAGATTCAAATCTCAAATTTTTTTATTTGTTTAACGTACCTTTCATATTTAAGTCTAATCTAACATTTAACGAAACCAAGAGTCTTATTGAAATAAGAAAACAAAACTTTTAAATTTATGTATATGTGATTTCTCAACCACCATATCCAAGATATCATAGTGGATGTCACATGCTTTAGGATTTTTATGAATTTAAGGCTAAACATATAATATTAGTAATAATGATGTTTTTAGTTAAATCGTTTGCTTTTAATACAGCCTCTCTTCCAAGAGAAAATAATACACACGAAAGAGTAATTTCCATTTCCAAATTCGTTTATATGGGAAAGGATAATTATAATTAAATTAAACTGCCTTTGTTAATTTCATTTTTTTTTCCTTGTTTGGGTTATAACGTTTATAAGAAATGGCCATAGTTTTACACGTGTAAAGAAATGTGTTGAACTTAATTAGGAAATGGACATGGTTTCTTGTTAATTAATAGTTAAATGCACCTGTGAATGTTGATAAACTTAGTTAATAAACATCTATCATGTAGTTTTTAAATATAATCTACCTTTTCTTTGTTTTATTATTAATTTTTTATTTTGTGTTTTGAGTTTAGGTTTTAATTGGTTTAATTTGTATAGTATTTCGCCCTTCTTCTTTTCATCTTTTGCGCTAATTAATGTCTATTTTGATATTTATAGGTTAATTTTCAGTTGATTAATTAAAGTAAGCAATGAAGAGAGAAATTTTAATTTTAATTTGAATAATTTGGTGACAAAACATAGAGGCTATTGATAAAGACGGCTCATCTTTGTGTTTCGATATGTGACGTTATTCTTTTAAATTTAGTGTGCTTATATATAGTAGGACTTCAATAAATTAAATTCAATTTGGTTCTAGCTATTTGATTGTTAAGGTCCATCAATAAATGAGTCATTTTAAAATTATAAAATACTACGTAATTAAAAATATAACTTTATATTTGTAGTACCTATAATATAATCATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATTATATTATAGTTTAATACATAATCTTAACAAAGTAACCTAATAGTTTAATACATAATCTTAGCTAGCTATATTCAAATTAGTTTTGAACATGTAGATTTAAGTATGCGACTCAAACAAAGTACGTTTCTTTATTCATTTTATCAAATTTTATATTTTTCTTACGATTTTCATTATCAAACACTCATTCAGTACAACCATTTATCATATTCATGTCAACTTTAAGGGTTCGCATGATCTTCCTTTATCTTTTTCCTGGTTAGTTACATTGGACACCATAGAAAAATATACATACCTCATACAACTGATATGTTATTTATTACAGAGTAAAATATATATATATATATATATATATATGAACTATGTTTTTTTTAAGATAGATACGATATAAATTACTATCATATTGGTTATATGTTAAATTATGTTATATTTTATTTAATGTCTTTTTTTATTTAATTTGAATTTCCTTACTTTTAATAAAATTTAAATTTTAGTCTTTACCATTAGTTTCTAATTGATTTTGTCTGGGAGATAAAAAGAGTGTTTTTAGTTTTATTTTTCCAAAAAAAAATGTAATCTTTACCAGCAATACTTTACAAATTGCAAAAGTATTTTTATATGGGATATTTTCTTACTTGAAAATTATAACCTAACATGCTCTCCGAAACAAACTAAATTATATAGCACAACAATAAAAATATTTGTAAAAATAATAATAGTTGACTAGTCAAATGGTGAAAAGTTTTAAAAGATGAAGTTTGTCCTTTAGCGACCGTCATCAATTATCAATTAAGTGATAATTGCTGTCAATTACAATAATTGACGGTACGTTTCTCAAATTGAAATTGTCACCGATAACATCTATTAGTGATAATAGTTATTTTCAATGATAACCTTCAATTTATCATAATTATGATTGTTTCTTATGGTTTTTTAAAATTGAAAGTCATAATTCATAGCAACTATCAATGATAACTTTCAACAAGAGAAAAAAAAATGTAAGTCTATTAGCAATTAGTTTTAGTTTGAAAATTTTGAAAAGAAGTGTTCAAAATAGTGATTGGACCCGGGTCTTTTAGTATTTTACTATACATGTGTCTTATAAACAATTATTTTATTGTTGTACTAGATATTCTATTACTTTTTACTTTAAGTTTTACTTATGCAGGTGACCCTTGGAACTACACCATCAAAACTTGAAATAACTTAACCAAAAAGTGACAACACTGTCTTCATTTTCTTTCATTCCGGCTTCTAAATATTGTCCCCTCACATGTTTATCATTTCTAGGCCTTTGCAATATACACACAAATAGTATATATTCTCTTTGCCCAATCTTATACTAAGGCTAATTCACTTGACTTACAATTTGATTTTTTAAACTCTAAAATTGTTGCACAAGAAAACATATATTCTCTCACACATTGATAACATTTTCTAGTTTGCTTTTTTTTTTTTTTAATTTTATTTTCCT

mRNA sequence

TTAAACGAAACCCCAAAAAACGATGCTTTTTTTTTTTTTCCTTTCCCCAAACTCGCTCGAATTTGGCCTATAAATTGCATGTGAAATCCATGAAAATGATGATCTCCCCATCTATATGTTTTATAAAAAGAAAAGGAAGAAAGAAAAAAACCCATTTTGATTTAATCGATAAAAACGCGTTTGAAGAACAGAAGAGAAATGTGAAAAGGGCCCTTCACCAGCCACATCGACCTCCATGCCTTTTCTTTTGTCTATATAAATCAAAGTTTTCTTTTCTTTTCTGTTCTTTTCTTTTGTTCTGTAGATGGATGGAGATCAATATAATCAGATATAGAGCCCACTTTTGTAAAAATCGAAAGAGGGTCGAAGAAATTACAAGAGTGCAAATGTGAAACCTTGAGATCTTTCTTGTGGAATTAGAGCAAAATTTTTGGCAGACAGGGCCAAGCCAGGCAGTACAAATGGAAGCTACTACTACTACAACAACAACAACAAAAAAAAAAGTTCTTGATTCAAAGATTCAAGCCATTCTTGCTGATGATCTTAGAAGAATCTGTATGAGTTTTTCTTCTTCTTCTTCTTCTAATTTGGTGACCCTTGGAACTACACCATCAAAACTTGAAATAACTTAACCAAAAAGTGACAACACTGTCTTCATTTTCTTTCATTCCGGCTTCTAAATATTGTCCCCTCACATGTTTATCATTTCTAGGCCTTTGCAATATACACACAAATAGTATATATTCTCTTTGCCCAATCTTATACTAAGGCTAATTCACTTGACTTACAATTTGATTTTTTAAACTCTAAAATTGTTGCACAAGAAAACATATATTCTCTCACACATTGATAACATTTTCTAGTTTGCTTTTTTTTTTTTTTAATTTTATTTTCCT

Coding sequence (CDS)

ATGAAAATGATGATCTCCCCATCTATATGTTTTATAAAAAGAAAAGGAAGAAAGAAAAAAACCCATTTTGATTTAATCGATAAAAACGCGTTTGAAGAACAGAAGAGAAATGTGAAAAGGGCCCTTCACCAGCCACATCGACCTCCATGCCTTTTCTTTTGTCTATATAAATCAAAGTTTTCTTTTCTTTTCTGTTCTTTTCTTTTGTTCTGTAGATGGATGGAGATCAATATAATCAGATATAGAGCCCACTTTTGTAAAAATCGAAAGAGGGTCGAAGAAATTACAAGAGTGCAAATGTGA

Protein sequence

MKMMISPSICFIKRKGRKKKTHFDLIDKNAFEEQKRNVKRALHQPHRPPCLFFCLYKSKFSFLFCSFLLFCRWMEINIIRYRAHFCKNRKRVEEITRVQM

Homology

The following BLAST results are available for this feature:

BLAST of Cmc08g0214351.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc08g0214351.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc08g0214351.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc08g0214351.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc08g0214351	Cmc08g0214351	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0214351.1-exon	Cmc08g0214351.1-exon-CMiso1.1chr08:4519927..4520232	exon
Cmc08g0214351.1-exon	Cmc08g0214351.1-exon-CMiso1.1chr08:4523112..4523373	exon
Cmc08g0214351.1-exon	Cmc08g0214351.1-exon-CMiso1.1chr08:4523507..4523834	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0214351.1-three_prime_utr	Cmc08g0214351.1-three_prime_utr-CMiso1.1chr08:4519927..4520232	three_prime_UTR
Cmc08g0214351.1-three_prime_utr	Cmc08g0214351.1-three_prime_utr-CMiso1.1chr08:4523112..4523309	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0214351.1-cds	Cmc08g0214351.1-cds-CMiso1.1chr08:4523310..4523373	CDS
Cmc08g0214351.1-cds	Cmc08g0214351.1-cds-CMiso1.1chr08:4523507..4523745	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0214351.1-five_prime_utr	Cmc08g0214351.1-five_prime_utr-CMiso1.1chr08:4523746..4523834	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc08g0214351.1	Cmc08g0214351.1-protein	polypeptide