Cmc08g0213511.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc08g0213511.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	lysine-rich arabinogalactan protein 18-like
Location	CMiso1.1chr08: 3989564 .. 3991310 (-)
Sequence length	1193
RNA-Seq Expression	Cmc08g0213511.1
Synteny	Cmc08g0213511.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCGAGGCGTTATTTACTGGTCTATATATACACTATGACGCCTCGGGCTGCGAAACATTCACTTCATCATCTACTACACTCACTCACACGGTAGAAATGGGTAGACAATCCGTAATCGCACTCGTTCTCATCTGCGCCGTCGTCGCTGGTGTCGGTGGCCAGTCTCCGGCTGCTGCTCCCACTACTACTCCCGCCGCTACTCCGCCAGTAGCAGCGAAGTATCCACCTCCAGCCGCATCTCCTGTATCTCCACCGACAAATTCATCTCCCGCCGCCGCTCCTCAAAAGCCGGCCACTCCAGCACCGGTCTCCACGCCGCCTGCATCGGCGCCACCAGCAGTCGCTCCAGTAGCTTCTCCACCAGCCAGCACTCCTCCGACTGCGTCCGTTCCTGCTAGCTCTCCTCCGGCTGCTTCTGTTCCACCTAGCTCTCCACCAGCTGCTACCGTTCCGGCAAGCTCTCCGCCTGTTCCAGTTCCGGTTAGTTCTCCACCAGTTCCAGTACCTGTGAGCTCTCCTCCAGTACCAACTCCAACGGAATCTCCTCCCGCTCCCGAAAGTTCTCCTCCTGCCCCAGTCGCGTCGCCTCCTGCTGAGGTTCCGGCCCCGGCACCTAGCAAGAAGTCAAAGAAGCACAGAGCACCAGCTCCTTCTCCAGCGTTGCTCGGTCCACCTGCGCCTCCTTCTGAAGCTCCTGCAGGAAGCGAGGAAGGTCCTTCGCCCAGTCCTTCACTGGAGGACAAGGTATTTCAAATCCCTAATCTCTACCATTACCGTCTTAAATTTGCCTGCATTGTCATTCTGTCCAAGATCTACAATATGCCATCATCAAACTGTCACAATACATTTCCGTAGCTAAGATCTCATCATAATTTTGATAGAATTGGTTCATGATTAGCGCTTGTATGGTTTTGTCATGGCTGCATTTGCACTTGCTTGACAACCGAGTGAATGAGCGTAATAACACGCGCCACCGACAGGAGTGGATCTAGCGCGTTAAGGCTCTAAGTTGAGATAAATTACCATGGTTGAGTCTAAAGACTAACCAAAGTTAAAAGGGAAAATAAAGAAAATCAAAACGCGCCAAAAAGAAATAAAAAGGAATCAATTTGTCAGATGGTCAGATCACACAACGCTCGAGATTAATAAATGTCAGTGTAGTTTTTCTCAGATCACATTTAGGAAAACACGTTAAGAACTTTAATTGACTTTAGCTTTAGGGTCTTTTTCTTTAAACCACGTCGTTATTTATAAAATTTATTAATCAAATTCTAATTTTGTTGTTGAAAAATTTGCAGAGTGGAGCAGAAGCATTGATGAAGGTGGCCGGAAGTTTGGCTTTGGGATGGGCTGCCGTCGCCGTTAGCATTATCTTTTAGAGAGAGAGAGAGAGAGATTTGATCGTGCTTCATTTATTTATATTTAATCTCTTTTATTTATTTTTGGTTAAAAATTTTCCCCCATTGTGTACTCCGTATCATAAGAGGTGCTTTATTGATTGAATTGATTCGATGAAATTTGTTTTAGAAATTTGAGCACTTTGTTGGGTATTTGCTTTGATGTGATGATGAACATTTTGGATCGGAGTATATGATTTGTTGTAATTCTTTCTGTGGAGGACATGAGAGTGGGGAAAGATCTTTTATTACATTTGGATCCTTTTGTGTTAGGTAAATTATTTAATTCTCCTTCATTTCTGTTCCACTACATTTTTGTCAATTTACTTTTTACTTCCATCAAATAATAC

mRNA sequence

TTCGAGGCGTTATTTACTGGTCTATATATACACTATGACGCCTCGGGCTGCGAAACATTCACTTCATCATCTACTACACTCACTCACACGGTAGAAATGGGTAGACAATCCGTAATCGCACTCGTTCTCATCTGCGCCGTCGTCGCTGGTGTCGGTGGCCAGTCTCCGGCTGCTGCTCCCACTACTACTCCCGCCGCTACTCCGCCAGTAGCAGCGAAGTATCCACCTCCAGCCGCATCTCCTGTATCTCCACCGACAAATTCATCTCCCGCCGCCGCTCCTCAAAAGCCGGCCACTCCAGCACCGGTCTCCACGCCGCCTGCATCGGCGCCACCAGCAGTCGCTCCAGTAGCTTCTCCACCAGCCAGCACTCCTCCGACTGCGTCCGTTCCTGCTAGCTCTCCTCCGGCTGCTTCTGTTCCACCTAGCTCTCCACCAGCTGCTACCGTTCCGGCAAGCTCTCCGCCTGTTCCAGTTCCGGTTAGTTCTCCACCAGTTCCAGTACCTGTGAGCTCTCCTCCAGTACCAACTCCAACGGAATCTCCTCCCGCTCCCGAAAGTTCTCCTCCTGCCCCAGTCGCGTCGCCTCCTGCTGAGGTTCCGGCCCCGGCACCTAGCAAGAAGTCAAAGAAGCACAGAGCACCAGCTCCTTCTCCAGCGTTGCTCGGTCCACCTGCGCCTCCTTCTGAAGCTCCTGCAGGAAGCGAGGAAGGTCCTTCGCCCAGTCCTTCACTGGAGGACAAGAGTGGAGCAGAAGCATTGATGAAGGTGGCCGGAAGTTTGGCTTTGGGATGGGCTGCCGTCGCCGTTAGCATTATCTTTTAGAGAGAGAGAGAGAGAGATTTGATCGTGCTTCATTTATTTATATTTAATCTCTTTTATTTATTTTTGGTTAAAAATTTTCCCCCATTGTGTACTCCGTATCATAAGAGGTGCTTTATTGATTGAATTGATTCGATGAAATTTGTTTTAGAAATTTGAGCACTTTGTTGGGTATTTGCTTTGATGTGATGATGAACATTTTGGATCGGAGTATATGATTTGTTGTAATTCTTTCTGTGGAGGACATGAGAGTGGGGAAAGATCTTTTATTACATTTGGATCCTTTTGTGTTAGGTAAATTATTTAATTCTCCTTCATTTCTGTTCCACTACATTTTTGTCAATTTACTTTTTACTTCCATCAAATAATAC

Coding sequence (CDS)

ATGGGTAGACAATCCGTAATCGCACTCGTTCTCATCTGCGCCGTCGTCGCTGGTGTCGGTGGCCAGTCTCCGGCTGCTGCTCCCACTACTACTCCCGCCGCTACTCCGCCAGTAGCAGCGAAGTATCCACCTCCAGCCGCATCTCCTGTATCTCCACCGACAAATTCATCTCCCGCCGCCGCTCCTCAAAAGCCGGCCACTCCAGCACCGGTCTCCACGCCGCCTGCATCGGCGCCACCAGCAGTCGCTCCAGTAGCTTCTCCACCAGCCAGCACTCCTCCGACTGCGTCCGTTCCTGCTAGCTCTCCTCCGGCTGCTTCTGTTCCACCTAGCTCTCCACCAGCTGCTACCGTTCCGGCAAGCTCTCCGCCTGTTCCAGTTCCGGTTAGTTCTCCACCAGTTCCAGTACCTGTGAGCTCTCCTCCAGTACCAACTCCAACGGAATCTCCTCCCGCTCCCGAAAGTTCTCCTCCTGCCCCAGTCGCGTCGCCTCCTGCTGAGGTTCCGGCCCCGGCACCTAGCAAGAAGTCAAAGAAGCACAGAGCACCAGCTCCTTCTCCAGCGTTGCTCGGTCCACCTGCGCCTCCTTCTGAAGCTCCTGCAGGAAGCGAGGAAGGTCCTTCGCCCAGTCCTTCACTGGAGGACAAGAGTGGAGCAGAAGCATTGATGAAGGTGGCCGGAAGTTTGGCTTTGGGATGGGCTGCCGTCGCCGTTAGCATTATCTTTTAG

Protein sequence

MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAAAPQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPASSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPSKKSKKHRAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEALMKVAGSLALGWAAVAVSIIF

Homology

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BLAST of Cmc08g0213511.1 vs. NCBI nr
Match: XP_008440341.2 (PREDICTED: lysine-rich arabinogalactan protein 18-like [Cucumis melo])

HSP 1 Score: 378.6 bits (971), Expect = 3.9e-101
Identity = 241/242 (99.59%), Postives = 241/242 (99.59%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60
           MGRQSVIALVLICAVVA VGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAVVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60

Query: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
           APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA
Sbjct: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPSKKSKKH 180
           SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPSKKSKKH
Sbjct: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPSKKSKKH 180

Query: 181 RAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEALMKVAGSLALGWAAVAVSI 240
           RAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEALMKVAGSLALGWAAVAVSI
Sbjct: 181 RAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEALMKVAGSLALGWAAVAVSI 240

Query: 241 IF 243
           IF
Sbjct: 241 IF 242

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BLAST of Cmc08g0213511.1 vs. NCBI nr
Match: NP_001267612.1 (arabinogalactan protein precursor [Cucumis sativus] >KGN48577.1 hypothetical protein Csa_003859 [Cucumis sativus] >BAA81686.1 unnamed protein product [Cucumis sativus] >BAC75541.1 arabinogalactan protein [Cucumis sativus])

HSP 1 Score: 364.4 bits (934), Expect = 7.7e-97
Identity = 236/243 (97.12%), Postives = 237/243 (97.53%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60
           MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAA YPPPAASPVS PTN SPAA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAATYPPPAASPVSTPTNPSPAA 60

Query: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
           APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA
Sbjct: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPS-KKSKK 180
           SSPPVPVPVSSPPV VPVSSPPVPTPTESPPAPESSPPAPVASPP EVPAPAPS KKSKK
Sbjct: 121 SSPPVPVPVSSPPVSVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSKKKSKK 180

Query: 181 HRAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEALMKVAGSLALGWAAVAVS 240
           HRAPAPSPALLGPPAPPSEAPAGSEEGP+PSPSLEDKSGAEALMKVAGSLALGWAAVAVS
Sbjct: 181 HRAPAPSPALLGPPAPPSEAPAGSEEGPAPSPSLEDKSGAEALMKVAGSLALGWAAVAVS 240

Query: 241 IIF 243
           IIF
Sbjct: 241 IIF 243

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BLAST of Cmc08g0213511.1 vs. NCBI nr
Match: TYK12844.1 (lysine-rich arabinogalactan protein 18-like [Cucumis melo var. makuwa])

HSP 1 Score: 335.9 bits (860), Expect = 2.9e-88
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60
           MGRQSVIALVLICAVVA VGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAVVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60

Query: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
           APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA
Sbjct: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPSKKSKKH 180
           SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPSKKSKKH
Sbjct: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPSKKSKKH 180

Query: 181 RAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDK 217
           RAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDK
Sbjct: 181 RAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDK 216

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BLAST of Cmc08g0213511.1 vs. NCBI nr
Match: XP_023003133.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita maxima])

HSP 1 Score: 307.8 bits (787), Expect = 8.5e-80
Identity = 213/256 (83.20%), Postives = 221/256 (86.33%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60
           MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPA   PVAAKYPPPAASPV PPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPATPAPVAAKYPPPAASPVVPPTNSSPAA 60

Query: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPA----- 120
           APQKP TPAPVST     PPAVAPVASPPASTPPTASVPASSPPAASVP SSPPA     
Sbjct: 61  APQKPVTPAPVST-----PPAVAPVASPPASTPPTASVPASSPPAASVPASSPPAASVPA 120

Query: 121 ----ATVPASSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAP 180
               ATVPASSPPVPVP SSPPVPVP SSPPVPTP ESPPAPES+PPAPVASPPAEVP+P
Sbjct: 121 SSPPATVPASSPPVPVPASSPPVPVPESSPPVPTPIESPPAPESAPPAPVASPPAEVPSP 180

Query: 181 APS-KKSKKHRAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEAL----MKVA 240
           APS KKSKKH+APAPSPALLGPPAPPSEAP GSEEGPSP+PSL+DKSGAEAL     KV 
Sbjct: 181 APSKKKSKKHKAPAPSPALLGPPAPPSEAPGGSEEGPSPAPSLDDKSGAEALRRNMQKVV 240

Query: 241 GSLALGWAAVAVSIIF 243
           GSLALG++A   S +F
Sbjct: 241 GSLALGFSAAVFSFMF 251

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BLAST of Cmc08g0213511.1 vs. NCBI nr
Match: XP_023517454.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307.0 bits (785), Expect = 1.5e-79
Identity = 210/247 (85.02%), Postives = 219/247 (88.66%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60
           MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPA   PVAAKYPPPAASPV PPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPATPAPVAAKYPPPAASPVVPPTNSSPAA 60

Query: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
           APQKP TPAPVST     PP VAPVASPPASTPPTASVPASSPPAASVP SSPP ATVPA
Sbjct: 61  APQKPVTPAPVST-----PPVVAPVASPPASTPPTASVPASSPPAASVPASSPP-ATVPA 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPS-KKSKK 180
           SSPPVPVP SSPPVPVP SSPPVPTP ESPPAPE++PPAPVASPPAEVP+PAPS KKSKK
Sbjct: 121 SSPPVPVPASSPPVPVPESSPPVPTPIESPPAPETAPPAPVASPPAEVPSPAPSKKKSKK 180

Query: 181 HRAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEAL----MKVAGSLALGWAA 240
           H+APAPSPALLGPPAPPSEAP GSEEGPSP+PSL+DKSGAEAL     KV GSLALG++A
Sbjct: 181 HKAPAPSPALLGPPAPPSEAPGGSEEGPSPAPSLDDKSGAEALRKNMQKVVGSLALGFSA 240

Query: 241 VAVSIIF 243
              S +F
Sbjct: 241 AVFSFMF 241

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BLAST of Cmc08g0213511.1 vs. ExPASy Swiss-Prot
Match: Q9FPR2 (Lysine-rich arabinogalactan protein 18 OS=Arabidopsis thaliana OX=3702 GN=AGP18 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-19
Identity = 116/250 (46.40%), Postives = 141/250 (56.40%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60
           M R  ++ + LIC VVAGVGGQSP ++PT +P  T P A     P  SP   P  +SP  
Sbjct: 1   MDRNFLLTVTLICIVVAGVGGQSPISSPTKSP--TTPSA-----PTTSPTKSPAVTSP-- 60

Query: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
                 T AP  TP ASA    +PV SP +  P              V  SSPP   VP 
Sbjct: 61  ------TTAPAKTPTASAS---SPVESPKSPAP--------------VSESSPPPTPVPE 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPS------ 180
           SSPPVP P+    V  PVSSPPVP P         SPPAPVA+P A+VPAPAPS      
Sbjct: 121 SSPPVPAPM----VSSPVSSPPVPAPV------ADSPPAPVAAPVADVPAPAPSKHKKTT 180

Query: 181 KKSKKHR-APAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGA---EALMKVA-GSL 240
           KKSKKH+ APAP+P LLGPPAPP+E+P  + +  SP PS +D+SGA     L  VA G++
Sbjct: 181 KKSKKHQAAPAPAPELLGPPAPPTESPGPNSDAFSPGPSADDQSGAASTRVLRNVAVGAV 208

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BLAST of Cmc08g0213511.1 vs. ExPASy Swiss-Prot
Match: Q9C5S0 (Classical arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=AGP9 PE=1 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-09
Identity = 98/232 (42.24%), Postives = 125/232 (53.88%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60
           M R   IA++ I  ++AGV GQ+P + PT TPA   P     PPPAA+P  PP ++ P  
Sbjct: 1   MARSFAIAVICI-VLIAGVTGQAPTSPPTATPAPPTPTT---PPPAATP--PPVSAPP-- 60

Query: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
                  P   S PP +  P       PPA+ PP    P SSPP AS PP++PP    P 
Sbjct: 61  -------PVTTSPPPVTTAP-------PPANPPP----PVSSPPPASPPPATPP----PV 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPSKKSKKH 180
           +SP  P PV+SPP   P + PPV TP          PPAP+ASPPA+VPAPAP+ K    
Sbjct: 121 ASP--PPPVASPP---PATPPPVATP----------PPAPLASPPAQVPAPAPTTKPD-- 180

Query: 181 RAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEALMKVAGSLALG 233
            +P+PSP+   PP P S+AP  S +  SP+PS  D +      K+  SL  G
Sbjct: 181 -SPSPSPS-SSPPLPSSDAPGPSTDSISPAPSPTDVNDQNGASKMVSSLVFG 183

[Close]

BLAST of Cmc08g0213511.1 vs. ExPASy Swiss-Prot
Match: Q9S740 (Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 PE=2 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 3.8e-06
Identity = 100/257 (38.91%), Postives = 132/257 (51.36%), Query Frame = 0


Query: 1   MGRQSVI-ALVLICAVVA--GVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSS 60
           M   S+I +L+L  A+++   V  Q PAA+P T+    PP     PP  A+P  PPT ++
Sbjct: 1   MESNSIIWSLLLASALISSFSVNAQGPAASPVTSTTTAPPPTTAAPPTTAAP--PPTTTT 60

Query: 61  P----AAAPQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSP 120
           P    A  P  P TP P  TP +   P VAPV SP    P     P +S P  S PP SP
Sbjct: 61  PPVSAAQPPASPVTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPTVSPPPVSP 120

Query: 121 PAATVPASSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSP----PAPVASPPAEVP 180
           P    PA + P P P S PP P   +SPP P P   PPAP S P    P+P++ PPA  P
Sbjct: 121 P----PAPTSPPPTPASPPPAP---ASPP-PAPASPPPAPVSPPPVQAPSPISLPPAPAP 180

Query: 181 APAPSKKSKKHR----APAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEALMKV 240
           AP   K+  KH+    APAP+P    PP+PPS       +  +P+PS  + +G  AL ++
Sbjct: 181 APTKHKRKHKHKRHHHAPAPAPI---PPSPPSPPVLTDPQDTAPAPS-PNTNGGNALNQL 240

Query: 241 AGSLALGWAAVAVSIIF 243
            G  A+ W    + I+F
Sbjct: 241 KGR-AVMWLNTGLVILF 242

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BLAST of Cmc08g0213511.1 vs. ExPASy TrEMBL
Match: A0A1S3B0X7 (lysine-rich arabinogalactan protein 18-like OS=Cucumis melo OX=3656 GN=LOC103484821 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.9e-101
Identity = 241/242 (99.59%), Postives = 241/242 (99.59%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60
           MGRQSVIALVLICAVVA VGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAVVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60

Query: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
           APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA
Sbjct: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPSKKSKKH 180
           SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPSKKSKKH
Sbjct: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPSKKSKKH 180

Query: 181 RAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEALMKVAGSLALGWAAVAVSI 240
           RAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEALMKVAGSLALGWAAVAVSI
Sbjct: 181 RAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEALMKVAGSLALGWAAVAVSI 240

Query: 241 IF 243
           IF
Sbjct: 241 IF 242

[Close]

BLAST of Cmc08g0213511.1 vs. ExPASy TrEMBL
Match: Q9XIV1 (Arabinogalactan protein OS=Cucumis sativus OX=3659 GN=Csa_6G493850 PE=2 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.7e-97
Identity = 236/243 (97.12%), Postives = 237/243 (97.53%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60
           MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAA YPPPAASPVS PTN SPAA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAATYPPPAASPVSTPTNPSPAA 60

Query: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
           APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA
Sbjct: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPS-KKSKK 180
           SSPPVPVPVSSPPV VPVSSPPVPTPTESPPAPESSPPAPVASPP EVPAPAPS KKSKK
Sbjct: 121 SSPPVPVPVSSPPVSVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSKKKSKK 180

Query: 181 HRAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEALMKVAGSLALGWAAVAVS 240
           HRAPAPSPALLGPPAPPSEAPAGSEEGP+PSPSLEDKSGAEALMKVAGSLALGWAAVAVS
Sbjct: 181 HRAPAPSPALLGPPAPPSEAPAGSEEGPAPSPSLEDKSGAEALMKVAGSLALGWAAVAVS 240

Query: 241 IIF 243
           IIF
Sbjct: 241 IIF 243

[Close]

BLAST of Cmc08g0213511.1 vs. ExPASy TrEMBL
Match: A0A5D3CP79 (Lysine-rich arabinogalactan protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004360 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.4e-88
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60
           MGRQSVIALVLICAVVA VGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAVVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60

Query: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
           APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA
Sbjct: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPSKKSKKH 180
           SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPSKKSKKH
Sbjct: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPSKKSKKH 180

Query: 181 RAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDK 217
           RAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDK
Sbjct: 181 RAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDK 216

[Close]

BLAST of Cmc08g0213511.1 vs. ExPASy TrEMBL
Match: A0A6J1KVL2 (lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111496835 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 4.1e-80
Identity = 213/256 (83.20%), Postives = 221/256 (86.33%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60
           MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPA   PVAAKYPPPAASPV PPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPATPAPVAAKYPPPAASPVVPPTNSSPAA 60

Query: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPA----- 120
           APQKP TPAPVST     PPAVAPVASPPASTPPTASVPASSPPAASVP SSPPA     
Sbjct: 61  APQKPVTPAPVST-----PPAVAPVASPPASTPPTASVPASSPPAASVPASSPPAASVPA 120

Query: 121 ----ATVPASSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAP 180
               ATVPASSPPVPVP SSPPVPVP SSPPVPTP ESPPAPES+PPAPVASPPAEVP+P
Sbjct: 121 SSPPATVPASSPPVPVPASSPPVPVPESSPPVPTPIESPPAPESAPPAPVASPPAEVPSP 180

Query: 181 APS-KKSKKHRAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEAL----MKVA 240
           APS KKSKKH+APAPSPALLGPPAPPSEAP GSEEGPSP+PSL+DKSGAEAL     KV 
Sbjct: 181 APSKKKSKKHKAPAPSPALLGPPAPPSEAPGGSEEGPSPAPSLDDKSGAEALRRNMQKVV 240

Query: 241 GSLALGWAAVAVSIIF 243
           GSLALG++A   S +F
Sbjct: 241 GSLALGFSAAVFSFMF 251

[Close]

BLAST of Cmc08g0213511.1 vs. ExPASy TrEMBL
Match: A0A6J1HFT1 (lysine-rich arabinogalactan protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111463555 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 6.0e-79
Identity = 209/247 (84.62%), Postives = 219/247 (88.66%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60
           MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPA   PVAAK PPPAASPV PPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPATPAPVAAKNPPPAASPVVPPTNSSPAA 60

Query: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
           APQKP TPAPVST     PPAVAPVASPPASTPPTASVPASSPPAASVP SSPP ATVPA
Sbjct: 61  APQKPVTPAPVST-----PPAVAPVASPPASTPPTASVPASSPPAASVPASSPP-ATVPA 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPS-KKSKK 180
           SSPPVPVP SSPPVPVP SSPPVPTP ESPPAPE++PPAPVASPPAEVP+PAPS KKSKK
Sbjct: 121 SSPPVPVPASSPPVPVPESSPPVPTPIESPPAPETAPPAPVASPPAEVPSPAPSKKKSKK 180

Query: 181 HRAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEAL----MKVAGSLALGWAA 240
           H+APAPSPALLGPPAPPSEAP GSEEGP+P+PSL+DKSGAEAL     KV GSLALG++A
Sbjct: 181 HKAPAPSPALLGPPAPPSEAPGGSEEGPTPAPSLDDKSGAEALRRNMQKVVGSLALGFSA 240

Query: 241 VAVSIIF 243
              S +F
Sbjct: 241 AVFSFMF 241

[Close]

BLAST of Cmc08g0213511.1 vs. TAIR 10
Match: AT4G37450.1 (arabinogalactan protein 18 )

HSP 1 Score: 98.2 bits (243), Expect = 9.5e-21
Identity = 116/250 (46.40%), Postives = 141/250 (56.40%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60
           M R  ++ + LIC VVAGVGGQSP ++PT +P  T P A     P  SP   P  +SP  
Sbjct: 1   MDRNFLLTVTLICIVVAGVGGQSPISSPTKSP--TTPSA-----PTTSPTKSPAVTSP-- 60

Query: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
                 T AP  TP ASA    +PV SP +  P              V  SSPP   VP 
Sbjct: 61  ------TTAPAKTPTASAS---SPVESPKSPAP--------------VSESSPPPTPVPE 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPS------ 180
           SSPPVP P+    V  PVSSPPVP P         SPPAPVA+P A+VPAPAPS      
Sbjct: 121 SSPPVPAPM----VSSPVSSPPVPAPV------ADSPPAPVAAPVADVPAPAPSKHKKTT 180

Query: 181 KKSKKHR-APAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGA---EALMKVA-GSL 240
           KKSKKH+ APAP+P LLGPPAPP+E+P  + +  SP PS +D+SGA     L  VA G++
Sbjct: 181 KKSKKHQAAPAPAPELLGPPAPPTESPGPNSDAFSPGPSADDQSGAASTRVLRNVAVGAV 208

[Close]

BLAST of Cmc08g0213511.1 vs. TAIR 10
Match: AT2G14890.1 (arabinogalactan protein 9 )

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-10
Identity = 98/232 (42.24%), Postives = 125/232 (53.88%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60
           M R   IA++ I  ++AGV GQ+P + PT TPA   P     PPPAA+P  PP ++ P  
Sbjct: 1   MARSFAIAVICI-VLIAGVTGQAPTSPPTATPAPPTPTT---PPPAATP--PPVSAPP-- 60

Query: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
                  P   S PP +  P       PPA+ PP    P SSPP AS PP++PP    P 
Sbjct: 61  -------PVTTSPPPVTTAP-------PPANPPP----PVSSPPPASPPPATPP----PV 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPSKKSKKH 180
           +SP  P PV+SPP   P + PPV TP          PPAP+ASPPA+VPAPAP+ K    
Sbjct: 121 ASP--PPPVASPP---PATPPPVATP----------PPAPLASPPAQVPAPAPTTKPD-- 180

Query: 181 RAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEALMKVAGSLALG 233
            +P+PSP+   PP P S+AP  S +  SP+PS  D +      K+  SL  G
Sbjct: 181 -SPSPSPS-SSPPLPSSDAPGPSTDSISPAPSPTDVNDQNGASKMVSSLVFG 183

[Close]

BLAST of Cmc08g0213511.1 vs. TAIR 10
Match: AT2G14890.2 (arabinogalactan protein 9 )

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-09
Identity = 94/215 (43.72%), Postives = 119/215 (55.35%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60
           M R   IA++ I  ++AGV GQ+P + PT TPA   P     PPPAA+P  PP ++ P  
Sbjct: 1   MARSFAIAVICI-VLIAGVTGQAPTSPPTATPAPPTPTT---PPPAATP--PPVSAPP-- 60

Query: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
                  P   S PP +  P       PPA+ PP    P SSPP AS PP++PP    P 
Sbjct: 61  -------PVTTSPPPVTTAP-------PPANPPP----PVSSPPPASPPPATPP----PV 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPSKKSKKH 180
           +SP  P PV+SPP   P + PPV TP          PPAP+ASPPA+VPAPAP+ K    
Sbjct: 121 ASP--PPPVASPP---PATPPPVATP----------PPAPLASPPAQVPAPAPTTKPD-- 166

Query: 181 RAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLED 216
            +P+PSP+   PP P S+AP  S +  SP+PS  D
Sbjct: 181 -SPSPSPS-SSPPLPSSDAPGPSTDSISPAPSPTD 166

[Close]

BLAST of Cmc08g0213511.1 vs. TAIR 10
Match: AT1G68725.1 (arabinogalactan protein 19 )

HSP 1 Score: 53.5 bits (127), Expect = 2.7e-07
Identity = 100/257 (38.91%), Postives = 132/257 (51.36%), Query Frame = 0


Query: 1   MGRQSVI-ALVLICAVVA--GVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSS 60
           M   S+I +L+L  A+++   V  Q PAA+P T+    PP     PP  A+P  PPT ++
Sbjct: 1   MESNSIIWSLLLASALISSFSVNAQGPAASPVTSTTTAPPPTTAAPPTTAAP--PPTTTT 60

Query: 61  P----AAAPQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSP 120
           P    A  P  P TP P  TP +   P VAPV SP    P     P +S P  S PP SP
Sbjct: 61  PPVSAAQPPASPVTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPTVSPPPVSP 120

Query: 121 PAATVPASSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSP----PAPVASPPAEVP 180
           P    PA + P P P S PP P   +SPP P P   PPAP S P    P+P++ PPA  P
Sbjct: 121 P----PAPTSPPPTPASPPPAP---ASPP-PAPASPPPAPVSPPPVQAPSPISLPPAPAP 180

Query: 181 APAPSKKSKKHR----APAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEALMKV 240
           AP   K+  KH+    APAP+P    PP+PPS       +  +P+PS  + +G  AL ++
Sbjct: 181 APTKHKRKHKHKRHHHAPAPAPI---PPSPPSPPVLTDPQDTAPAPS-PNTNGGNALNQL 240

Query: 241 AGSLALGWAAVAVSIIF 243
            G  A+ W    + I+F
Sbjct: 241 KGR-AVMWLNTGLVILF 242

[Close]

BLAST of Cmc08g0213511.1 vs. TAIR 10
Match: AT3G22142.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 42.4 bits (98), Expect = 6.2e-04
Identity = 84/201 (41.79%), Postives = 108/201 (53.73%), Query Frame = 0


Query: 24  PAAAP--TTTPAATPPVAAKYPPPAASPV-SPPTNSSPAAAPQKPATPAPVSTPPASAPP 83
           P A P   T P ATPP+A   PP A SPV +PPT + P A P  P    PV+TPP +APP
Sbjct: 759 PVAKPPVVTPPTATPPIAT--PPIAKSPVATPPTATPPVATP--PIAKPPVATPPTTAPP 818

Query: 84  -AVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPASSPPVPVPVSSPPVPVPVS 143
            A  PVA PP +TPP A+ P + PP  + P S PP AT PA++PP+  P   PP   PV+
Sbjct: 819 TATPPVAKPPVATPPIATPPTAKPPILTPPISKPPVATPPAATPPITTP---PPAKPPVA 878

Query: 144 SPPVPTPTESPP----APESSPP---APVASPPAEVPAPAPSKKSKKHRAPAPSPALLGP 203
           +PP+ TP  + P     P ++PP   +PVA PP  +P   P K     + P   P +  P
Sbjct: 879 TPPIATPPIAKPPVATPPTATPPIATSPVAKPPVAIP---PIKTPPPAKPPVAIPPIATP 938

Query: 204 PA--PPSEAPAGSEEGPSPSP 212
           P   PP   P  +    + SP
Sbjct: 939 PVAKPPVATPPTATPPIATSP 949

The following BLAST results are available for this feature:

BLAST of Cmc08g0213511.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440341.2	3.9e-101	99.59	PREDICTED: lysine-rich arabinogalactan protein 18-like [Cucumis melo]	[more]
NP_001267612.1	7.7e-97	97.12	arabinogalactan protein precursor [Cucumis sativus] >KGN48577.1 hypothetical pro...	[more]
TYK12844.1	2.9e-88	99.54	lysine-rich arabinogalactan protein 18-like [Cucumis melo var. makuwa]	[more]
XP_023003133.1	8.5e-80	83.20	lysine-rich arabinogalactan protein 18-like [Cucurbita maxima]	[more]
XP_023517454.1	1.5e-79	85.02	lysine-rich arabinogalactan protein 18-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc08g0213511.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FPR2	1.3e-19	46.40	Lysine-rich arabinogalactan protein 18 OS=Arabidopsis thaliana OX=3702 GN=AGP18 ...	[more]
Q9C5S0	2.2e-09	42.24	Classical arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=AGP9 PE=1...	[more]
Q9S740	3.8e-06	38.91	Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 ...	[more]

BLAST of Cmc08g0213511.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B0X7	1.9e-101	99.59	lysine-rich arabinogalactan protein 18-like OS=Cucumis melo OX=3656 GN=LOC103484...	[more]
Q9XIV1	3.7e-97	97.12	Arabinogalactan protein OS=Cucumis sativus OX=3659 GN=Csa_6G493850 PE=2 SV=1	[more]
A0A5D3CP79	1.4e-88	99.54	Lysine-rich arabinogalactan protein 18-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1KVL2	4.1e-80	83.20	lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1HFT1	6.0e-79	84.62	lysine-rich arabinogalactan protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Cmc08g0213511.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37450.1	9.5e-21	46.40	arabinogalactan protein 18	[more]
AT2G14890.1	1.5e-10	42.24	arabinogalactan protein 9	[more]
AT2G14890.2	1.7e-09	43.72	arabinogalactan protein 9	[more]
AT1G68725.1	2.7e-07	38.91	arabinogalactan protein 19	[more]
AT3G22142.1	6.2e-04	41.79	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 25..46 score: 34.55 coord: 89..114 score: 29.23 coord: 49..65 score: 29.41 coord: 67..84 score: 36.67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..217
None	No IPR available	PANTHER	PTHR37209:SF3	LYSINE-RICH ARABINOGALACTAN PROTEIN 17-RELATED	coord: 1..238
IPR044981	Lysine-rich arabinogalactan protein AGP9/17/18	PANTHER	PTHR37209	LYSINE-RICH ARABINOGALACTAN PROTEIN 17-RELATED	coord: 1..238

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc08g0213511	Cmc08g0213511	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0213511.1-exon	Cmc08g0213511.1-exon-CMiso1.1chr08:3989564..3990012	exon
Cmc08g0213511.1-exon	Cmc08g0213511.1-exon-CMiso1.1chr08:3990567..3991310	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0213511.1-three_prime_utr	Cmc08g0213511.1-three_prime_utr-CMiso1.1chr08:3989564..3989931	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0213511.1-cds	Cmc08g0213511.1-cds-CMiso1.1chr08:3989932..3990012	CDS
Cmc08g0213511.1-cds	Cmc08g0213511.1-cds-CMiso1.1chr08:3990567..3991214	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0213511.1-five_prime_utr	Cmc08g0213511.1-five_prime_utr-CMiso1.1chr08:3991215..3991310	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc08g0213511.1	Cmc08g0213511.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane