Cmc07g0194451 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0194451
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	cGMP-specific 3',5'-cyclic phosphodiesterase
Location	CMiso1.1chr07: 17102345 .. 17103339 (+)
RNA-Seq Expression	Cmc07g0194451
Synteny	Cmc07g0194451

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGTAAAGGTAATACCAAATTTAGAAATTGGACGTGTGGTAAAATTGTGTTCCAAGTTATATAAAACTAAGGTTGAATCTCCATTTTTTAAATTTTTTTCCATGTTATTTTTATTAATCTATATAGTTTCCATCAATAAAATTTCTGGGTTGCGTGGTGGTGATCATGATGGGAGGGAGAGAGGTTGAATCAAAATTTACTAAAAATAAAAATTAAAAACAGTTTATCGTATTCGTGTAGTACAAGCTAGCAGGTTCATCAAATGGAACGCTATATGATACCCATGGAGGTCTGAACTTCAATCTAACAGAAGATATGAACATTGAAATTAAAACACACAATTACGAGTTATCAATAAAACCCTTAAACTAATTAACCAACAACAATTAGGGCTGCATATATTAAATAATAACCAAACCAAGTTTAGGGAGAAGAAGATGTTGCAGGAGGAGGGGACAAAAATGGGATGGAAGGGAATGAAGTTGGAATGGTAGGGATTGATGGAAAGTTCGGAAGTGCCATTGTCGGGAGCGGTGGCAACGCTAGCCCGTTCGGAAGCGGAGGGAGATTAACCTTCGGTATTGTAGGTTGTGGTAAATTTGGAAGAGTAGGGTTTGGCAAGGCAGGGAATGGCGGTATCCCGGTTGGAATTGCTGGAAGATTTGGCACCAAGGGCGGAGTGGTTTGCAAAAGATGGCGAGCAGCTTGGCCGAAGTTGATGCTTGAGAGAGCCAAAGTAGCCATAAAGGCAATGATCAAGAACTTTGAAGAAGCCATTTTTTTCCCTTTGAGAAGATGATTTGAAGTTTTTGTTAAGATGAGAGATGAGATGCATTGTAAGGCATCATGATATGTTTATATATTGGTTGGAGCTTTGGTTTAGGATAATTTGGTTGATGAAGGTCGGTGTGTTCTGGCCGCCATGGATATGATCTTGAAAACAAGAAATCTTAGTTTAATTACTTTCTTGAAGAATTTGTTCAACAACTAAATG

mRNA sequence

TAAGTAAAGGTAATACCAAATTTAGAAATTGGACGTGTGGTAAAATTGTGTTCCAAGTTATATAAAACTAAGGTTGAATCTCCATTTTTTAAATTTTTTTCCATGTTATTTTTATTAATCTATATAGTTTCCATCAATAAAATTTCTGGGTTGCGTGGTGGTGATCATGATGGGAGGGAGAGAGGTTGAATCAAAATTTACTAAAAATAAAAATTAAAAACAGTTTATCGTATTCGTGTAGTACAAGCTAGCAGGTTCATCAAATGGAACGCTATATGATACCCATGGAGGTCTGAACTTCAATCTAACAGAAGATATGAACATTGAAATTAAAACACACAATTACGAGTTATCAATAAAACCCTTAAACTAATTAACCAACAACAATTAGGGCTGCATATATTAAATAATAACCAAACCAAGTTTAGGGAGAAGAAGATGTTGCAGGAGGAGGGGACAAAAATGGGATGGAAGGGAATGAAGTTGGAATGGTAGGGATTGATGGAAAGTTCGGAAGTGCCATTGTCGGGAGCGGTGGCAACGCTAGCCCGTTCGGAAGCGGAGGGAGATTAACCTTCGGTATTGTAGGTTGTGGTAAATTTGGAAGAGTAGGGTTTGGCAAGGCAGGGAATGGCGGTATCCCGGTTGGAATTGCTGGAAGATTTGGCACCAAGGGCGGAGTGGTTTGCAAAAGATGGCGAGCAGCTTGGCCGAAGTTGATGCTTGAGAGAGCCAAAGTAGCCATAAAGGCAATGATCAAGAACTTTGAAGAAGCCATTTTTTTCCCTTTGAGAAGATGATTTGAAGTTTTTGTTAAGATGAGAGATGAGATGCATTGTAAGGCATCATGATATGTTTATATATTGGTTGGAGCTTTGGTTTAGGATAATTTGGTTGATGAAGGTCGGTGTGTTCTGGCCGCCATGGATATGATCTTGAAAACAAGAAATCTTAGTTTAATTACTTTCTTGAAGAATTTGTTCAACAACTAAATG

Coding sequence (CDS)

ATGGAAGGGAATGAAGTTGGAATGGTAGGGATTGATGGAAAGTTCGGAAGTGCCATTGTCGGGAGCGGTGGCAACGCTAGCCCGTTCGGAAGCGGAGGGAGATTAACCTTCGGTATTGTAGGTTGTGGTAAATTTGGAAGAGTAGGGTTTGGCAAGGCAGGGAATGGCGGTATCCCGGTTGGAATTGCTGGAAGATTTGGCACCAAGGGCGGAGTGGTTTGCAAAAGATGGCGAGCAGCTTGGCCGAAGTTGATGCTTGAGAGAGCCAAAGTAGCCATAAAGGCAATGATCAAGAACTTTGAAGAAGCCATTTTTTTCCCTTTGAGAAGATGA

Protein sequence

MEGNEVGMVGIDGKFGSAIVGSGGNASPFGSGGRLTFGIVGCGKFGRVGFGKAGNGGIPVGIAGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIKNFEEAIFFPLRR

Homology

[Close]

BLAST of Cmc07g0194451 vs. NCBI nr
Match: KAG6576875.1 (hypothetical protein SDJN03_24449, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 125.6 bits (314), Expect = 2.7e-25
Identity = 73/110 (66.36%), Postives = 81/110 (73.64%), Query Frame = 0


Query: 1   MEGNEVGMVGIDGKFGSAIVGSGGNASPFGS-GGRLTFGIVGCGKFGRVGFGKAGNGGIP 60
           MEGNE GMVGID     AIVGSGG+A+P G   G+L  G VGCG+FGR     AGNGGIP
Sbjct: 118 MEGNEAGMVGID-----AIVGSGGSAAPLGMLTGKLGKGNVGCGRFGR-----AGNGGIP 177

Query: 61  VGIAGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIKNFEEAIFFPLR 110
           VG  G+FGTK GVVCKRWRAAWP  +LERAKVA+K  IKN EEAI   L+
Sbjct: 178 VGTTGKFGTKDGVVCKRWRAAWPMSILERAKVAMKTTIKNLEEAIEMVLK 217

[Close]

BLAST of Cmc07g0194451 vs. NCBI nr
Match: KAG7014899.1 (hypothetical protein SDJN02_22530, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 125.6 bits (314), Expect = 2.7e-25
Identity = 73/110 (66.36%), Postives = 81/110 (73.64%), Query Frame = 0


Query: 1   MEGNEVGMVGIDGKFGSAIVGSGGNASPFGS-GGRLTFGIVGCGKFGRVGFGKAGNGGIP 60
           MEGNE GMVGID     AIVGSGG+A+P G   G+L  G VGCG+FGR     AGNGGIP
Sbjct: 118 MEGNEAGMVGID-----AIVGSGGSAAPLGMLTGKLGKGNVGCGRFGR-----AGNGGIP 177

Query: 61  VGIAGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIKNFEEAIFFPLR 110
           VG  G+FGTK GVVCKRWRAAWP  +LERAKVA+K  IKN EEAI   L+
Sbjct: 178 VGTTGKFGTKDGVVCKRWRAAWPMSILERAKVAMKTTIKNLEEAIEMVLK 217

[Close]

BLAST of Cmc07g0194451 vs. NCBI nr
Match: XP_022984242.1 (uncharacterized protein LOC111482613 [Cucurbita maxima])

HSP 1 Score: 68.6 bits (166), Expect = 4.0e-08
Identity = 47/111 (42.34%), Postives = 62/111 (55.86%), Query Frame = 0


Query: 2   EGNEVGMVGIDGKFGSAIVGSGGNASP-------FGSGGRLTFG-------IVGCGKFGR 61
           +G+ VGM G DGK GS  VG+GG A+P        GSGG ++ G       +VG G  G 
Sbjct: 28  DGSVVGMDGRDGKVGSEDVGNGGKAAPVGMFIGELGSGGSVSLGSDGVLGPVVGFGNMGN 87

Query: 62  VGFGKAGNGGIPVGIAGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIK 99
            G G + +G    GI GR G++GG VC+R R A P+  LE AK  + A +K
Sbjct: 88  AGRGGSADGLGSDGIGGRVGSEGGAVCRRCRVARPRSTLENAKATMMAKVK 138

[Close]

BLAST of Cmc07g0194451 vs. NCBI nr
Match: TYK29414.1 (beta carbonic anhydrase 5 [Cucumis melo var. makuwa])

HSP 1 Score: 68.6 bits (166), Expect = 4.0e-08
Identity = 50/115 (43.48%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 2   EGNEVGMVGIDGKFGSAIVGSGGNAS-------PFGSGGRLTFGIVGCGKFGRVGF---- 61
           +G+ VG+ G DGKFGS +VG GGNA+         GSGG ++ G  G GKFG  G     
Sbjct: 291 DGSVVGIDGRDGKFGSEVVGRGGNATLVGMFMGRLGSGGSVSLGREGSGKFGMDGILGPV 350

Query: 62  GKAGNGGIPVGI-AGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIKNFEEAI 105
           G  G GG   G+ +   G K G+VC+R R       LE AKV +KA +K  +EAI
Sbjct: 351 GTGGRGGTADGLGSDGIGGKFGIVCRRCREVRAASTLENAKVTMKARMKQLKEAI 405

[Close]

BLAST of Cmc07g0194451 vs. NCBI nr
Match: KAA0044283.1 (beta carbonic anhydrase 5 [Cucumis melo var. makuwa])

HSP 1 Score: 68.6 bits (166), Expect = 4.0e-08
Identity = 50/115 (43.48%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 2   EGNEVGMVGIDGKFGSAIVGSGGNAS-------PFGSGGRLTFGIVGCGKFGRVGF---- 61
           +G+ VG+ G DGKFGS +VG GGNA+         GSGG ++ G  G GKFG  G     
Sbjct: 295 DGSVVGIDGRDGKFGSEVVGRGGNATLVGMFMGRLGSGGSVSLGREGSGKFGMDGILGPV 354

Query: 62  GKAGNGGIPVGI-AGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIKNFEEAI 105
           G  G GG   G+ +   G K G+VC+R R       LE AKV +KA +K  +EAI
Sbjct: 355 GTGGRGGTADGLGSDGIGGKFGIVCRRCREVRAASTLENAKVTMKARMKQLKEAI 409

[Close]

BLAST of Cmc07g0194451 vs. ExPASy TrEMBL
Match: A0A0A0L0M4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374620 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.8e-44
Identity = 94/107 (87.85%), Postives = 98/107 (91.59%), Query Frame = 0


Query: 1   MEGNEVGMVGIDGKFGSAIVGSGGNASPFGSGGRLTFGIVGCGKFGRVGFGKAGNGGIPV 60
           MEGNE+GMVGIDGKFGS IVGSGGNASP GSGG+L FG VGCG FGRVGFGK GNGGI V
Sbjct: 1   MEGNEIGMVGIDGKFGSVIVGSGGNASPIGSGGKLIFGNVGCGNFGRVGFGKPGNGGIRV 60

Query: 61  GIAGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIKNFEEAIFFP 108
           GIAGRFGTKGGVVC+RWRAAWPKLMLERAKVA+KAMIKN E AIFFP
Sbjct: 61  GIAGRFGTKGGVVCERWRAAWPKLMLERAKVAVKAMIKNLEVAIFFP 107

[Close]

BLAST of Cmc07g0194451 vs. ExPASy TrEMBL
Match: A0A0A0L399 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374640 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 7.0e-43
Identity = 92/107 (85.98%), Postives = 96/107 (89.72%), Query Frame = 0


Query: 1   MEGNEVGMVGIDGKFGSAIVGSGGNASPFGSGGRLTFGIVGCGKFGRVGFGKAGNGGIPV 60
           MEGNE+GMVGI G FGS IVGSGGNASP GSGG+L FG VGCG FGRVGFGK GNGGI V
Sbjct: 1   MEGNEIGMVGIGGNFGSVIVGSGGNASPIGSGGKLIFGNVGCGNFGRVGFGKPGNGGIRV 60

Query: 61  GIAGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIKNFEEAIFFP 108
           GIAGRFGTKGGVVC+RWRAAWPKLMLERAKVA+KAMIKN E AIFFP
Sbjct: 61  GIAGRFGTKGGVVCERWRAAWPKLMLERAKVAVKAMIKNLEVAIFFP 107

[Close]

BLAST of Cmc07g0194451 vs. ExPASy TrEMBL
Match: A0A0A0KYM4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G375140 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.7e-41
Identity = 89/101 (88.12%), Postives = 93/101 (92.08%), Query Frame = 0


Query: 1   MEGNEVGMVGIDGKFGSAIVGSGGNASPFGSGGRLTFGIVGCGKFGRVGFGKAGNGGIPV 60
           MEGNE+GMVGIDGKFGS IVGSGGN SP  SGG+LTFG VGCGKFGRVGFGK GNGGI V
Sbjct: 1   MEGNEIGMVGIDGKFGSVIVGSGGNGSPIESGGKLTFGNVGCGKFGRVGFGKPGNGGIRV 60

Query: 61  GIAGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIKNFE 102
           GIAGRFGTKGGVVC+RWR AWPKLMLERAKVA+KAMIKNFE
Sbjct: 61  GIAGRFGTKGGVVCQRWRVAWPKLMLERAKVAVKAMIKNFE 101

[Close]

BLAST of Cmc07g0194451 vs. ExPASy TrEMBL
Match: A0A6J1J1P5 (uncharacterized protein LOC111482613 OS=Cucurbita maxima OX=3661 GN=LOC111482613 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.9e-08
Identity = 47/111 (42.34%), Postives = 62/111 (55.86%), Query Frame = 0


Query: 2   EGNEVGMVGIDGKFGSAIVGSGGNASP-------FGSGGRLTFG-------IVGCGKFGR 61
           +G+ VGM G DGK GS  VG+GG A+P        GSGG ++ G       +VG G  G 
Sbjct: 28  DGSVVGMDGRDGKVGSEDVGNGGKAAPVGMFIGELGSGGSVSLGSDGVLGPVVGFGNMGN 87

Query: 62  VGFGKAGNGGIPVGIAGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIK 99
            G G + +G    GI GR G++GG VC+R R A P+  LE AK  + A +K
Sbjct: 88  AGRGGSADGLGSDGIGGRVGSEGGAVCRRCRVARPRSTLENAKATMMAKVK 138

[Close]

BLAST of Cmc07g0194451 vs. ExPASy TrEMBL
Match: A0A5D3E0R8 (Carbonic anhydrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00040 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.9e-08
Identity = 50/115 (43.48%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 2   EGNEVGMVGIDGKFGSAIVGSGGNAS-------PFGSGGRLTFGIVGCGKFGRVGF---- 61
           +G+ VG+ G DGKFGS +VG GGNA+         GSGG ++ G  G GKFG  G     
Sbjct: 291 DGSVVGIDGRDGKFGSEVVGRGGNATLVGMFMGRLGSGGSVSLGREGSGKFGMDGILGPV 350

Query: 62  GKAGNGGIPVGI-AGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIKNFEEAI 105
           G  G GG   G+ +   G K G+VC+R R       LE AKV +KA +K  +EAI
Sbjct: 351 GTGGRGGTADGLGSDGIGGKFGIVCRRCREVRAASTLENAKVTMKARMKQLKEAI 405

The following BLAST results are available for this feature:

BLAST of Cmc07g0194451 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6576875.1	2.7e-25	66.36	hypothetical protein SDJN03_24449, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7014899.1	2.7e-25	66.36	hypothetical protein SDJN02_22530, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022984242.1	4.0e-08	42.34	uncharacterized protein LOC111482613 [Cucurbita maxima]	[more]
TYK29414.1	4.0e-08	43.48	beta carbonic anhydrase 5 [Cucumis melo var. makuwa]	[more]
KAA0044283.1	4.0e-08	43.48	beta carbonic anhydrase 5 [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0194451 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc07g0194451 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0M4	2.8e-44	87.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374620 PE=4 SV=1	[more]
A0A0A0L399	7.0e-43	85.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374640 PE=4 SV=1	[more]
A0A0A0KYM4	1.7e-41	88.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G375140 PE=4 SV=1	[more]
A0A6J1J1P5	1.9e-08	42.34	uncharacterized protein LOC111482613 OS=Cucurbita maxima OX=3661 GN=LOC111482613...	[more]
A0A5D3E0R8	1.9e-08	43.48	Carbonic anhydrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G0...	[more]

BLAST of Cmc07g0194451 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0194451.1	Cmc07g0194451.1	mRNA