Cmc06g0171481 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0171481
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	U3 small nucleolar RNA-associated protein 14 B isoform 1
Location	CMiso1.1chr06: 27313694 .. 27316668 (+)
RNA-Seq Expression	Cmc06g0171481
Synteny	Cmc06g0171481

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGACTTTTTCTTATAAAAACCCATTCAGTGAATGTATTAACTCTGAATTCCAACCTCATTTTTTTTCTGTAAAGGGACCAACAACGGCCACAGGATAACGAGGCAGCCGTATATGGAACAATCAATAACATCTCACTCACACTCACTCCAGATAATCAATAATCCATCATGAATTTCTTCTTCACGTCTCAGATTTCAAACCCTGCTTCCTAATACTTCCTTCATTCCCAAATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACAACAATTTTTGCAACAAACCCACCAAATTCAATCCTCTTCCCCCTCCCAAGGTTGTCATCTGCAATCCGAGTGGGCTTCGTTTGAGGTTTTATGGGCGGAGATTGTTCTTTCCGGGTGGTGGTTGGGTTGAACAACGGGTTTTTGGAAAACATAGAGGGTTTAAGGGAAAAAGAGGGCGGCTAATTGTTGCAAGGTTTAATCAGGGTTTTGGGTTTAACGGCGGCGGCGGTGACGGCGGAGACGATGGGGCAACTGCAAGGCTTCTGGGTAATATTGCTTTGGCTGCTGGCTTAACTTACCTTTCGGTGACAGGGCAGCTTGGCTGGGTTTTGGATGCCATTGTTTCCATTTGGGTATGTATTCTTCTTCTTCTTCTCTGTTTCTCTGCGTTTGATTCGGGAGTTTAAGATCTATTTTTTCTCTTTGGAAAACTGGGTGAAATGTGCTTGATTTTAGCAGTTTTAGTTTTAGTGATTATTGATGAGCATTTAAATGACGCTATACTTTTACTTCCAATGTGCTCTTTTTATTTTAATTTAGCTGGTATTATCACTTCTGGGTTCAATATTCATTTCGCCATTTATCTTATTAAGACAATAAGATCCTCGGCATGTCTTAAAAATGATTCAAATTTTGTTTTGGATTGAATATCAAATTACTGATTCACCCAAAAACTTAAACTAATGAACTGATAATTTAATTGTATCTATTCTTTAGCCATCGCTGTAACTAGTTCTTATTTTGGATTTCTTAACATTTCCAACGAAACATAAAATTTTTCCTTTTAGATGTGATGGAAGTGGAAGGGGAGCTTTTCAACCTTACATTAAAGGGCATTTTCTTTTATATTTGTGAAGAATAAAATGAGAATCGTTAGATATTATATTAAATTTATCATTACCTACGGGCTTAAGTTTTTTTTGGTGAATGGATAATTTAAAATACTATCATAACAAATTGTTTCAAGATGTCTTGAGTTCATATTATTTCTTTCCCAATTAATATCTATTTGCTTGGCATGCAAATGCAAGTGAAGGGAATGTTAGATATTATATTTAATTATCCTTACTTACTAGCTTAAGCTTTTAGATGACCGGTGATTTAAGAAGAGTTATAAGGATATATAGTATTCTTACAGAGAGGTTGATTGAGAAAGTGTGGCTAACTTCAATCCCTTCCTTTAGATATATGCTATCAAGTTCTTTTAGAATTATAATTAGATGTAATTTTTGTTCATTAACCATAGGAGCTCCTTTCTAAAATTTAGTTTTGTTTTTGGATGAAATATTTCTTTTCTGAAGTTTAGTTGCGTTTTTGGATGAAATATCTTTGATTTGCTTCATCTGGCTCGGGCTTTAAAAACTGGTTTCTAATGGGATTTGTTTGGATTCAAGAACCGATTGAAGATGAATTCCCTTTTGTTTTAGCTTTTAGAGCCTTGATTTGATCTGTTAACATATATGGCTATTCAGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGTGATATAGTTCAAAGCAATGTTAGTCTTTATTATATCTTTTGCATTTTCAACCTCAAATCTTGAGCTTATGTAATGACAGACTGCCACTTCTTGTCTTGCATTTGCAGTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAGTAAGTGATCTTGAAAGAACTTGTTTGAGGAGATAACTCGATCTTGAAATGATTAGCACACTTCATTTACATCCATATTACAGATCAACACTAAATGAAGAGCTGCAACTGTGCCCTTTTTGTAGCCAACCTTTCTCTGGTAAATCCCAAGTTTTTATAAATCTTAAGTTCTTATTGTTGTTGGATCATAAACTGTTAGTTTATATTGGTTCGCTTCGTTTTTCTTTTCCTTGTATGTAAGAACATCAAATACTGCATAACTTCTTATTCATTTGTGTATTGATTTGTGTATTGATTCTTCCTTTACAAATTCAGTGGTGGATGACAAGTTTGTGAGGGACTCGGTGACGTTCTCCAAGAAAACTTCTTCCACCTTTGGACAGGCTTTTAGTGACTTTACTTCTCCCAGAAAAGGTAAGATTCTTCCTCGACTATATCCCCCCCCCCCCCCCAAACAAATATTTAACCTACTTGAAACTCAACCACCTCTTGTGATTGATTGATTGAAGGGAAGGAAACTTCTGGTGCAGTTGTCGACATAGAAGCAGAAGTAAAAGATGTGGACTGAACTCGTCTTGGTAAGCGGTTGATTTTGTTGTTGACCGTAGTCTTAAGATACTTGTAAGTGTTCAAATAGCATGCTTTTTCTTATGCAATGCTTGTGAACCATGGATTACAGTTAGTAGTCTTCAGAAGCACATCAAAATTTAGGGGGACAAGATCAGTTGGTTCAATTGGGTTTGCCAGATTGAATTAATTTTTGACACTGGAGATCTTTGTATATTCGTTATATGTTCTTCATGGGTAGAATTTCCAATTCTGAAACAACTGTAGAAATTTGTGAAATGCCTTCACTTTTTGTATATTGATTTTGATACAATAAGTCTAAGGTACAGGCTTTACTCTATAACTAATAAAGACTGATGGACTACAACATAAACTCTTTGCTTATTTGCTTCACACATTGGAAAAGGCACGTTTTTGGATCCCTTTCTTTATTTTTATATACTTGAGGATACCGTCT

mRNA sequence

GTTTGACTTTTTCTTATAAAAACCCATTCAGTGAATGTATTAACTCTGAATTCCAACCTCATTTTTTTTCTGTAAAGGGACCAACAACGGCCACAGGATAACGAGGCAGCCGTATATGGAACAATCAATAACATCTCACTCACACTCACTCCAGATAATCAATAATCCATCATGAATTTCTTCTTCACGTCTCAGATTTCAAACCCTGCTTCCTAATACTTCCTTCATTCCCAAATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACAACAATTTTTGCAACAAACCCACCAAATTCAATCCTCTTCCCCCTCCCAAGGTTGTCATCTGCAATCCGAGTGGGCTTCGTTTGAGGTTTTATGGGCGGAGATTGTTCTTTCCGGGTGGTGGTTGGGTTGAACAACGGGTTTTTGGAAAACATAGAGGGTTTAAGGGAAAAAGAGGGCGGCTAATTGTTGCAAGGTTTAATCAGGGTTTTGGGTTTAACGGCGGCGGCGGTGACGGCGGAGACGATGGGGCAACTGCAAGGCTTCTGGGTAATATTGCTTTGGCTGCTGGCTTAACTTACCTTTCGGTGACAGGGCAGCTTGGCTGGGTTTTGGATGCCATTGTTTCCATTTGGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGTGATATAGTTCAAAGCAATTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAATCAACACTAAATGAAGAGCTGCAACTGTGCCCTTTTTGTAGCCAACCTTTCTCTGTGGTGGATGACAAGTTTGTGAGGGACTCGGTGACGTTCTCCAAGAAAACTTCTTCCACCTTTGGACAGGCTTTTAGTGACTTTACTTCTCCCAGAAAAGGGAAGGAAACTTCTGGTGCAGTTGTCGACATAGAAGCAGAAGTAAAAGATGTGGACTGAACTCGTCTTGTAGTCTTCAGAAGCACATCAAAATTTAGGGGGACAAGATCAGTTGGTTCAATTGGGTTTGCCAGATTGAATTAATTTTTGACACTGGAGATCTTTGTATATTCGTTATATGTTCTTCATGGGTAGAATTTCCAATTCTGAAACAACTGTAGAAATTTGTGAAATGCCTTCACTTTTTGTATATTGATTTTGATACAATAAGTCTAAGGTACAGGCTTTACTCTATAACTAATAAAGACTGATGGACTACAACATAAACTCTTTGCTTATTTGCTTCACACATTGGAAAAGGCACGTTTTTGGATCCCTTTCTTTATTTTTATATACTTGAGGATACCGTCT

Coding sequence (CDS)

ATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACAACAATTTTTGCAACAAACCCACCAAATTCAATCCTCTTCCCCCTCCCAAGGTTGTCATCTGCAATCCGAGTGGGCTTCGTTTGAGGTTTTATGGGCGGAGATTGTTCTTTCCGGGTGGTGGTTGGGTTGAACAACGGGTTTTTGGAAAACATAGAGGGTTTAAGGGAAAAAGAGGGCGGCTAATTGTTGCAAGGTTTAATCAGGGTTTTGGGTTTAACGGCGGCGGCGGTGACGGCGGAGACGATGGGGCAACTGCAAGGCTTCTGGGTAATATTGCTTTGGCTGCTGGCTTAACTTACCTTTCGGTGACAGGGCAGCTTGGCTGGGTTTTGGATGCCATTGTTTCCATTTGGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGTGATATAGTTCAAAGCAATTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAATCAACACTAAATGAAGAGCTGCAACTGTGCCCTTTTTGTAGCCAACCTTTCTCTGTGGTGGATGACAAGTTTGTGAGGGACTCGGTGACGTTCTCCAAGAAAACTTCTTCCACCTTTGGACAGGCTTTTAGTGACTTTACTTCTCCCAGAAAAGGGAAGGAAACTTCTGGTGCAGTTGTCGACATAGAAGCAGAAGTAAAAGATGTGGACTGA

Protein sequence

MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQLCPFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDVD

Homology

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BLAST of Cmc06g0171481 vs. NCBI nr
Match: XP_008452285.1 (PREDICTED: uncharacterized protein LOC103493356 [Cucumis melo] >KAA0046868.1 uncharacterized protein E6C27_scaffold230G00230 [Cucumis melo var. makuwa] >TYK03278.1 uncharacterized protein E5676_scaffold298G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 486.1 bits (1250), Expect = 1.7e-133
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ 120
           VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ 120

Query: 121 LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQLC 180
           LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQLC
Sbjct: 121 LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQLC 180

Query: 181 PFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDVD 240
           PFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDVD
Sbjct: 181 PFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDVD 240

[Close]

BLAST of Cmc06g0171481 vs. NCBI nr
Match: XP_004149291.1 (uncharacterized protein LOC101205846 [Cucumis sativus] >KGN56214.1 hypothetical protein Csa_010420 [Cucumis sativus])

HSP 1 Score: 461.1 bits (1185), Expect = 6.0e-126
Identity = 231/246 (93.90%), Postives = 233/246 (94.72%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVV C PSGLRLRFYG RL FPGGGWV+QR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60

Query: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGG------GGDGGDDGATARLLGNIALAAGLTY 120
           VFGKH GFKGKRGRLIVARFNQGFGFNGG      GGDGGDDGATARL+GNIALAAGLTY
Sbjct: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240
           EELQLCPFCSQPFSVVDDKFVRDSV FS KTSSTFGQAFSDFTSPRKGKETSGAVVDIEA
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240

[Close]

BLAST of Cmc06g0171481 vs. NCBI nr
Match: XP_022985259.1 (uncharacterized protein LOC111483302 [Cucurbita maxima])

HSP 1 Score: 397.9 bits (1021), Expect = 6.2e-107
Identity = 207/242 (85.54%), Postives = 217/242 (89.67%), Query Frame = 0


Query: 1   MTSFIRFSTFN-ILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQ 60
           MTSFIRFS+FN +LH+NF  KPT+FNPLPPPKV  C+ +G RLR  G +L F  GGW  +
Sbjct: 1   MTSFIRFSSFNLLLHDNFYKKPTRFNPLPPPKVASCDRNGFRLRLCGGKLPFLSGGWSNK 60

Query: 61  RVFGKHRGFKGKRGRLIVARFNQGFGFN-GGGGDGGDDGATARLLGNIALAAGLTYLSVT 120
            V GK+  FKGKRG LIVARFNQGFGFN GGGG GGDDGATARLLGNIALAAGLTYLSVT
Sbjct: 61  GVLGKYGVFKGKRG-LIVARFNQGFGFNGGGGGGGGDDGATARLLGNIALAAGLTYLSVT 120

Query: 121 GQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQ 180
           GQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTLNEELQ
Sbjct: 121 GQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQ 180

Query: 181 LCPFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD 240
           LCPFCSQPFSVVDDKFVRDSV FS KTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD
Sbjct: 181 LCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD 240

[Close]

BLAST of Cmc06g0171481 vs. NCBI nr
Match: KAG7015466.1 (hypothetical protein SDJN02_23102 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 397.5 bits (1020), Expect = 8.1e-107
Identity = 206/242 (85.12%), Postives = 215/242 (88.84%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60
           MTSFIRFS+FN+LH+NF  KPT+FNPLPPPKV  C+ +G RLR    +L F  GGW    
Sbjct: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRLCRGKLPFLSGGWGNNG 60

Query: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGG--GGDGGDDGATARLLGNIALAAGLTYLSVT 120
           V GK+  FKGKRG LIVARFNQGFGFNGG  GG GGDDGATARLLGNIALAAGLTYLSVT
Sbjct: 61  VSGKYGVFKGKRG-LIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVT 120

Query: 121 GQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQ 180
           GQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTLNEELQ
Sbjct: 121 GQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQ 180

Query: 181 LCPFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD 240
           LCPFCSQPFSVVDDKFVRDSV FS KTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD
Sbjct: 181 LCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD 240

[Close]

BLAST of Cmc06g0171481 vs. NCBI nr
Match: XP_038905451.1 (uncharacterized protein LOC120091477 isoform X2 [Benincasa hispida] >XP_038905452.1 uncharacterized protein LOC120091477 isoform X2 [Benincasa hispida])

HSP 1 Score: 397.5 bits (1020), Expect = 8.1e-107
Identity = 209/242 (86.36%), Postives = 214/242 (88.43%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60
           MTSFIRFST NILH++FCNKPTKFNPLP PKV   + +G RLR YGRRL F        R
Sbjct: 1   MTSFIRFSTLNILHDSFCNKPTKFNPLPAPKVASWDRNGFRLRVYGRRLSFLDVCRGNVR 60

Query: 61  VFGKHRGFKGKRGRLIVARFNQGFGFN--GGGGDGGDDGATARLLGNIALAAGLTYLSVT 120
           VFGKH G KGKRG LIVARFNQGFGFN  GGGG GGDDGATARLLGNIALA GLTYLSVT
Sbjct: 61  VFGKHGGSKGKRG-LIVARFNQGFGFNGGGGGGGGGDDGATARLLGNIALAVGLTYLSVT 120

Query: 121 GQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQ 180
           GQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTLNEELQ
Sbjct: 121 GQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQ 180

Query: 181 LCPFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD 240
           LCPFCSQPFSVVDDKFVRDSV FS KTSSTFGQAF DFTSP+KGKETSGAVVDIEAEVKD
Sbjct: 181 LCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFGDFTSPQKGKETSGAVVDIEAEVKD 240

[Close]

BLAST of Cmc06g0171481 vs. ExPASy TrEMBL
Match: A0A5A7TVG5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001050 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 8.4e-134
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ 120
           VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ 120

Query: 121 LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQLC 180
           LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQLC
Sbjct: 121 LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQLC 180

Query: 181 PFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDVD 240
           PFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDVD
Sbjct: 181 PFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDVD 240

[Close]

BLAST of Cmc06g0171481 vs. ExPASy TrEMBL
Match: A0A1S3BUA7 (uncharacterized protein LOC103493356 OS=Cucumis melo OX=3656 GN=LOC103493356 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 8.4e-134
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ 120
           VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ 120

Query: 121 LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQLC 180
           LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQLC
Sbjct: 121 LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQLC 180

Query: 181 PFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDVD 240
           PFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDVD
Sbjct: 181 PFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDVD 240

[Close]

BLAST of Cmc06g0171481 vs. ExPASy TrEMBL
Match: A0A0A0L5A4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099750 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 2.9e-126
Identity = 231/246 (93.90%), Postives = 233/246 (94.72%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVV C PSGLRLRFYG RL FPGGGWV+QR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60

Query: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGG------GGDGGDDGATARLLGNIALAAGLTY 120
           VFGKH GFKGKRGRLIVARFNQGFGFNGG      GGDGGDDGATARL+GNIALAAGLTY
Sbjct: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240
           EELQLCPFCSQPFSVVDDKFVRDSV FS KTSSTFGQAFSDFTSPRKGKETSGAVVDIEA
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240

[Close]

BLAST of Cmc06g0171481 vs. ExPASy TrEMBL
Match: A0A6J1JCT5 (uncharacterized protein LOC111483302 OS=Cucurbita maxima OX=3661 GN=LOC111483302 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 3.0e-107
Identity = 207/242 (85.54%), Postives = 217/242 (89.67%), Query Frame = 0


Query: 1   MTSFIRFSTFN-ILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQ 60
           MTSFIRFS+FN +LH+NF  KPT+FNPLPPPKV  C+ +G RLR  G +L F  GGW  +
Sbjct: 1   MTSFIRFSSFNLLLHDNFYKKPTRFNPLPPPKVASCDRNGFRLRLCGGKLPFLSGGWSNK 60

Query: 61  RVFGKHRGFKGKRGRLIVARFNQGFGFN-GGGGDGGDDGATARLLGNIALAAGLTYLSVT 120
            V GK+  FKGKRG LIVARFNQGFGFN GGGG GGDDGATARLLGNIALAAGLTYLSVT
Sbjct: 61  GVLGKYGVFKGKRG-LIVARFNQGFGFNGGGGGGGGDDGATARLLGNIALAAGLTYLSVT 120

Query: 121 GQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQ 180
           GQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTLNEELQ
Sbjct: 121 GQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQ 180

Query: 181 LCPFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD 240
           LCPFCSQPFSVVDDKFVRDSV FS KTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD
Sbjct: 181 LCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD 240

[Close]

BLAST of Cmc06g0171481 vs. ExPASy TrEMBL
Match: A0A6J1EMN9 (uncharacterized protein LOC111435981 OS=Cucurbita moschata OX=3662 GN=LOC111435981 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.1e-106
Identity = 206/242 (85.12%), Postives = 215/242 (88.84%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60
           MTSFIRFS+FN+LH+NF  KPT+FNPLPPPKV  C+ +G RLR    +L F  GGW    
Sbjct: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRPCRGKLPFLSGGWGNNG 60

Query: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGG--GGDGGDDGATARLLGNIALAAGLTYLSVT 120
           V GK+  FKGKRG LIVARFNQGFGFNGG  GG GGDDGATARLLGNIALAAGLTYLSVT
Sbjct: 61  VSGKYGVFKGKRG-LIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVT 120

Query: 121 GQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQ 180
           GQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTLNEELQ
Sbjct: 121 GQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQ 180

Query: 181 LCPFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD 240
           LCPFCSQPFSVVDDKFVRDSV FS KTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD
Sbjct: 181 LCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD 240

[Close]

BLAST of Cmc06g0171481 vs. TAIR 10
Match: AT4G27390.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 213.4 bits (542), Expect = 2.0e-55
Identity = 103/150 (68.67%), Postives = 128/150 (85.33%), Query Frame = 0


Query: 92  DGGDDGATARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAG 151
           +GGD+    R+LGN+ALA GLTYLS+TGQLGW+LDAIVS+WL+ V+VPI+G+ AF WWA 
Sbjct: 87  NGGDNNGNGRILGNLALAIGLTYLSMTGQLGWILDAIVSVWLIVVIVPILGLGAFFWWAQ 146

Query: 152 RDIVQSNCPNCGNEFQIFKSTLNEELQLCPFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQ 211
           RDIVQSNCPNCGNEFQIFKS +++E+QLCPFC+QPFSVVDDKFV++ V FS +T++ FGQ
Sbjct: 147 RDIVQSNCPNCGNEFQIFKSAMDDEVQLCPFCTQPFSVVDDKFVKEPVKFSNQTTA-FGQ 206

Query: 212 AFSDFTS-PRKGKETSGAVVDIEAEVKDVD 241
             + F+S P+KGK +S AVVDIEAEV D D
Sbjct: 207 DLNGFSSKPKKGKGSSTAVVDIEAEVTDAD 235

The following BLAST results are available for this feature:

BLAST of Cmc06g0171481 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452285.1	1.7e-133	100.00	PREDICTED: uncharacterized protein LOC103493356 [Cucumis melo] >KAA0046868.1 unc...	[more]
XP_004149291.1	6.0e-126	93.90	uncharacterized protein LOC101205846 [Cucumis sativus] >KGN56214.1 hypothetical ...	[more]
XP_022985259.1	6.2e-107	85.54	uncharacterized protein LOC111483302 [Cucurbita maxima]	[more]
KAG7015466.1	8.1e-107	85.12	hypothetical protein SDJN02_23102 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038905451.1	8.1e-107	86.36	uncharacterized protein LOC120091477 isoform X2 [Benincasa hispida] >XP_03890545...	[more]

BLAST of Cmc06g0171481 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc06g0171481 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TVG5	8.4e-134	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BUA7	8.4e-134	100.00	uncharacterized protein LOC103493356 OS=Cucumis melo OX=3656 GN=LOC103493356 PE=...	[more]
A0A0A0L5A4	2.9e-126	93.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099750 PE=4 SV=1	[more]
A0A6J1JCT5	3.0e-107	85.54	uncharacterized protein LOC111483302 OS=Cucurbita maxima OX=3661 GN=LOC111483302...	[more]
A0A6J1EMN9	1.1e-106	85.12	uncharacterized protein LOC111435981 OS=Cucurbita moschata OX=3662 GN=LOC1114359...	[more]

BLAST of Cmc06g0171481 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27390.1	2.0e-55	68.67	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36785	OS05G0502500 PROTEIN	coord: 9..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0171481.1	Cmc06g0171481.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane