Cmc04g0088251 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0088251
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	TPR_REGION domain-containing protein
Location	CMiso1.1chr04: 893358 .. 894791 (+)
RNA-Seq Expression	Cmc04g0088251
Synteny	Cmc04g0088251

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAAAACTCCGCCATTTCATAACCCTTCTCAACTTTTCAGCTATGAAATCTGCTCTCCTCCGAACCGGTTCCGTTCCCCTCCTCTCTCCGACCACCACGGCTTCCAACAACAAACAACCGTTGTATGGAGTTTTATCCTGCCACAACAGCTCCGCTTCATCTCCCAGAATCTCTCTACATTGCACACGAAATAATTCTAATCGTATCCGAAGAGCAGCATCGGAGAGCGACATCGTACGATCACTCCACGAGGTTTCCAATACGTCCGATCAATTTAGTGGACTCGCATCTCGATCTCTATCTCGTTCTTTTCCTTCCAAAATTCCAGAGGAGGAGTTTATAGACGAGGATGATCAATTCGACAGTAATTCCATGGAGGAGGATAAAGAATATCTCAATTACCGAGTCGGAGTTAATGATCGTAGTAAGATCGGCGCGTACTACGAACATATGCTGAAATTGAACCCTAGCGACGCTTTATTACTAAGAAACTACGGAAAATTCCTACACGAGGTACGTAATCGGAAAAAAAAAACTAGAATTATCAAATAATCGAAACTCTGTTTGGATCTGAAATCGTGAAACGTAATCGAATAATCTTAGACTTAGATTTGTGTGAAATTGATGGATGAAGGTGGCGAATGATACAAAACGAGCGGAAGAATGTTACAGCAGAGCAATACTAGCAAGTCCAACAGACGGTGAATTACTGGCACTATACGGGAAATTAGTATGGGACACTGAAAGAGATAAACAAAGAGCTCAATATTACTTCGATCGCGCAGTTTATGCTTCTCCTAACGACTGGTAACTTTCCGATCTCTGGATCTAATAAAAAATTATCCCTAATCTTACGAACTAGATCGAAGGTCTCTTGATCTTCTGATTCAATAATAATAATTATAATACTAATGGTATGAATTTGGTTTTGTGAAATAGTTTGGTGACAGGACATTACGCTCATTTCATGTGGCAAGTTGAAGACGATGAGGCTGCTTTGGCGGAGGATTCACCGGCGGGTATGGTAACGGCTTGTTGATGTTTGAAGAAATTGGGTTTTGGGAAATTTAGGAGAGAAAGAACTAACAAAAGGAGTGGGGATGTGATTTGTGCATCGCTATCTCAAGAGGAAATAAATATTTTCTATTTTATTCCATACTTAAAGCTCTTTTACACACACACACATATATATACATTTTCTTTTTTCTTTGTTACGTTGTAAAAGTGTGAATAATCTTTTGGGAAAGTTTAATATCGACGTTTACTTAACAATTCGATGCCTAATGGTCCGAATAATAAACACATATAGTTCATATTTCTTTTTTTCTTAAAAGTTATTATATTCCATTTTAAAAAAATATGGTACCCTAACTTTTACTCTAATTTAGAAATTAGGTTTAGCAAAACTCAATCATCTACCAGAGGGCTGTCT

mRNA sequence

CACAAAAACTCCGCCATTTCATAACCCTTCTCAACTTTTCAGCTATGAAATCTGCTCTCCTCCGAACCGGTTCCGTTCCCCTCCTCTCTCCGACCACCACGGCTTCCAACAACAAACAACCGTTGTATGGAGTTTTATCCTGCCACAACAGCTCCGCTTCATCTCCCAGAATCTCTCTACATTGCACACGAAATAATTCTAATCGTATCCGAAGAGCAGCATCGGAGAGCGACATCGTACGATCACTCCACGAGGTTTCCAATACGTCCGATCAATTTAGTGGACTCGCATCTCGATCTCTATCTCGTTCTTTTCCTTCCAAAATTCCAGAGGAGGAGTTTATAGACGAGGATGATCAATTCGACAGTAATTCCATGGAGGAGGATAAAGAATATCTCAATTACCGAGTCGGAGTTAATGATCGTAGTAAGATCGGCGCGTACTACGAACATATGCTGAAATTGAACCCTAGCGACGCTTTATTACTAAGAAACTACGGAAAATTCCTACACGAGGTGGCGAATGATACAAAACGAGCGGAAGAATGTTACAGCAGAGCAATACTAGCAAGTCCAACAGACGGTGAATTACTGGCACTATACGGGAAATTAGTATGGGACACTGAAAGAGATAAACAAAGAGCTCAATATTACTTCGATCGCGCAGTTTATGCTTCTCCTAACGACTGTTTGGTGACAGGACATTACGCTCATTTCATGTGGCAAGTTGAAGACGATGAGGCTGCTTTGGCGGAGGATTCACCGGCGGGTATGGTAACGGCTTGTTGATGTTTGAAGAAATTGGGTTTTGGGAAATTTAGGAGAGAAAGAACTAACAAAAGGAGTGGGGATGTGATTTGTGCATCGCTATCTCAAGAGGAAATAAATATTTTCTATTTTATTCCATACTTAAAGCTCTTTTACACACACACACATATATATACATTTTCTTTTTTCTTTGTTACGTTGTAAAAGTGTGAATAATCTTTTGGGAAAGTTTAATATCGACGTTTACTTAACAATTCGATGCCTAATGGTCCGAATAATAAACACATATAGTTCATATTTCTTTTTTTCTTAAAAGTTATTATATTCCATTTTAAAAAAATATGGTACCCTAACTTTTACTCTAATTTAGAAATTAGGTTTAGCAAAACTCAATCATCTACCAGAGGGCTGTCT

Coding sequence (CDS)

ATGAAATCTGCTCTCCTCCGAACCGGTTCCGTTCCCCTCCTCTCTCCGACCACCACGGCTTCCAACAACAAACAACCGTTGTATGGAGTTTTATCCTGCCACAACAGCTCCGCTTCATCTCCCAGAATCTCTCTACATTGCACACGAAATAATTCTAATCGTATCCGAAGAGCAGCATCGGAGAGCGACATCGTACGATCACTCCACGAGGTTTCCAATACGTCCGATCAATTTAGTGGACTCGCATCTCGATCTCTATCTCGTTCTTTTCCTTCCAAAATTCCAGAGGAGGAGTTTATAGACGAGGATGATCAATTCGACAGTAATTCCATGGAGGAGGATAAAGAATATCTCAATTACCGAGTCGGAGTTAATGATCGTAGTAAGATCGGCGCGTACTACGAACATATGCTGAAATTGAACCCTAGCGACGCTTTATTACTAAGAAACTACGGAAAATTCCTACACGAGGTGGCGAATGATACAAAACGAGCGGAAGAATGTTACAGCAGAGCAATACTAGCAAGTCCAACAGACGGTGAATTACTGGCACTATACGGGAAATTAGTATGGGACACTGAAAGAGATAAACAAAGAGCTCAATATTACTTCGATCGCGCAGTTTATGCTTCTCCTAACGACTGTTTGGTGACAGGACATTACGCTCATTTCATGTGGCAAGTTGAAGACGATGAGGCTGCTTTGGCGGAGGATTCACCGGCGGGTATGGTAACGGCTTGTTGA

Protein sequence

MKSALLRTGSVPLLSPTTTASNNKQPLYGVLSCHNSSASSPRISLHCTRNNSNRIRRAASESDIVRSLHEVSNTSDQFSGLASRSLSRSFPSKIPEEEFIDEDDQFDSNSMEEDKEYLNYRVGVNDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDTKRAEECYSRAILASPTDGELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWQVEDDEAALAEDSPAGMVTAC

Homology

[Close]

BLAST of Cmc04g0088251 vs. NCBI nr
Match: XP_008465993.1 (PREDICTED: uncharacterized protein LOC103503559 [Cucumis melo] >KAA0038565.1 Tetratricopeptide-like helical [Cucumis melo var. makuwa] >TYK31178.1 Tetratricopeptide-like helical [Cucumis melo var. makuwa])

HSP 1 Score: 487.3 bits (1253), Expect = 8.0e-134
Identity = 245/247 (99.19%), Postives = 246/247 (99.60%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTASNNKQPLYGVLSCHNSSASSPRISLHCTRNNSNRIRRAAS 60
           MKSALLRTGSVPLLSPTTTASNNKQPLYGVLSCHNSSASSPRISLHCTRNNSNRIRRAAS
Sbjct: 1   MKSALLRTGSVPLLSPTTTASNNKQPLYGVLSCHNSSASSPRISLHCTRNNSNRIRRAAS 60

Query: 61  ESDIVRSLHEVSNTSDQFSGLASRSLSRSFPSKIPEEEFIDEDDQFDSNSMEEDKEYLNY 120
           ESDIVRSLHEVSNTSDQFSGLASRSLSRSFPSKIPEEEFIDEDDQFDS+SMEEDKEYLNY
Sbjct: 61  ESDIVRSLHEVSNTSDQFSGLASRSLSRSFPSKIPEEEFIDEDDQFDSDSMEEDKEYLNY 120

Query: 121 RVGVNDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDTKRAEECYSRAILASPTDG 180
           RVGVNDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEV NDTKRAEECYSRAILASPTDG
Sbjct: 121 RVGVNDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVVNDTKRAEECYSRAILASPTDG 180

Query: 181 ELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWQVEDDEAALAEDSP 240
           ELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWQVEDDEAALAEDSP
Sbjct: 181 ELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWQVEDDEAALAEDSP 240

Query: 241 AGMVTAC 248
           AGMVTAC
Sbjct: 241 AGMVTAC 247

[Close]

BLAST of Cmc04g0088251 vs. NCBI nr
Match: XP_004136396.1 (uncharacterized protein LOC101218835 [Cucumis sativus] >KGN60369.1 hypothetical protein Csa_002556 [Cucumis sativus])

HSP 1 Score: 406.4 bits (1043), Expect = 1.8e-109
Identity = 220/256 (85.94%), Postives = 233/256 (91.02%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTA----SNNKQPLYGVLSCHNSSASSPR-ISLH-CTRNNSNR 60
           MKSALLRTGSVPLLSPTTT     SNNKQPLYG+ S HNSS SSPR ISLH CTRN+SN 
Sbjct: 1   MKSALLRTGSVPLLSPTTTPSSSFSNNKQPLYGLFSSHNSSTSSPRSISLHYCTRNHSNH 60

Query: 61  IRRAASESDIVRSLHEVSNTSDQFSGLASRSLSR-SFPSKIPEEEFIDED-DQ-FDSNSM 120
           IRRAASESDIVRSLH+VSNTSDQFSGLASRS SR SFPSKIPEEEF++ED DQ FD +SM
Sbjct: 61  IRRAASESDIVRSLHQVSNTSDQFSGLASRSRSRSSFPSKIPEEEFLNEDHDQIFDGDSM 120

Query: 121 EEDKEYLNYRVGVNDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDTKRAEECYSR 180
           EEDK +LN  +G+NDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVAND+KRAEECYSR
Sbjct: 121 EEDKVFLNSPIGINDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDSKRAEECYSR 180

Query: 181 AILASPTDGELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWQVEDD 240
           AILASPTDGELLALYGKLVWDT+RDKQRAQYYFDRAVYASPNDCLVTGHYAHFMW+VE+D
Sbjct: 181 AILASPTDGELLALYGKLVWDTQRDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWEVEED 240

Query: 241 EAAL-AEDSPAGMVTA 247
           EAA  AEDS AGMV A
Sbjct: 241 EAAASAEDSAAGMVRA 256

[Close]

BLAST of Cmc04g0088251 vs. NCBI nr
Match: XP_038888361.1 (uncharacterized protein LOC120078207 [Benincasa hispida])

HSP 1 Score: 330.1 bits (845), Expect = 1.6e-86
Identity = 185/263 (70.34%), Postives = 210/263 (79.85%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTA---SNNKQPLYGVLSCHNSSASSPRISLHCTRN-----NS 60
           MKSALLRTGSVP+LSP   +   SNNK PLYGV SC+ SS SSP+ISLH   N     NS
Sbjct: 1   MKSALLRTGSVPVLSPAAASFSFSNNK-PLYGVFSCYKSSVSSPKISLHFEINHRRGKNS 60

Query: 61  NRIRRAASESDIVRSLHEVSNTSDQFSGL--ASRSLSRSFPSKIPEEEFIDEDDQFDSNS 120
           +RIRRAASESDI +SLHEV N  DQ SG+   SRS SRSFPS IPEEE ++ED+  D +S
Sbjct: 61  SRIRRAASESDITQSLHEVLNPHDQSSGVRSRSRSRSRSFPSGIPEEELLNEDES-DGDS 120

Query: 121 MEEDKEYLN--YRVGVNDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDTKRAEEC 180
           M++  ++++  +  G NDRSKIGAYYE +LKLNPSDALLLRNYGKFLHEV  DT RAEEC
Sbjct: 121 MKDGVDFVSDTFSNGSNDRSKIGAYYEELLKLNPSDALLLRNYGKFLHEVVKDTIRAEEC 180

Query: 181 YSRAILASPTDGELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWQV 240
           YSRAILASPTDGELLALYGKLVWDT+RDK+RAQYYFDRAVYASP+DCLV GHYAHF+WQV
Sbjct: 181 YSRAILASPTDGELLALYGKLVWDTQRDKRRAQYYFDRAVYASPSDCLVIGHYAHFLWQV 240

Query: 241 EDDE-----AALAEDSPAGMVTA 247
           EDDE     AA AE  PA +V+A
Sbjct: 241 EDDEAAAAAAAAAEAPPAAVVSA 261

[Close]

BLAST of Cmc04g0088251 vs. NCBI nr
Match: XP_022930988.1 (uncharacterized protein LOC111437316 [Cucurbita moschata] >KAG7036203.1 hypothetical protein SDJN02_03004 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 302.0 bits (772), Expect = 4.8e-78
Identity = 168/270 (62.22%), Postives = 204/270 (75.56%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTAS---NNKQPLYGVLSCHNSSASSPRISLHCTRN-----NS 60
           MKSALLRT S+P++ P+ TAS   +N +PL+GV + H SS SSP+ISLH   N     NS
Sbjct: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60

Query: 61  NRIRRAASESDIVRSLHEVSNTSDQFSGLASRSLSRSFPSKIPEEEFIDEDDQFDSNSME 120
           + IRRA+SESDI RSLHEVSN  DQF G+ SRS +RS  S+IPEEEF+++ D+FDS+SME
Sbjct: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQ-DEFDSDSME 120

Query: 121 EDKEYLNYRVGV---------------NDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHE 180
           +D   L+  +G                NDR+KIGAYYE +LKLNP+DALLLRNYGKFLHE
Sbjct: 121 DDSGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHE 180

Query: 181 VANDTKRAEECYSRAILASPTDGELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLV 240
           V  D  R+EECYSRAILA+P+DGELLALYGKLVW++ +DKQRA+YYFDRAV ASPNDCLV
Sbjct: 181 VEKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLV 240

Query: 241 TGHYAHFMWQVEDD-EAALAEDSPAGMVTA 247
            G+YA+F+WQ+EDD E   AE  PA MV A
Sbjct: 241 IGYYAYFLWQIEDDEEEEAAEVWPAAMVAA 269

[Close]

BLAST of Cmc04g0088251 vs. NCBI nr
Match: XP_023532088.1 (uncharacterized protein LOC111794359 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.0 bits (772), Expect = 4.8e-78
Identity = 168/270 (62.22%), Postives = 204/270 (75.56%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTAS---NNKQPLYGVLSCHNSSASSPRISLHCTRN-----NS 60
           MKSALLRT S+P++ P+ TAS   +N +PL+GV + H SS SSP+ISLH   N     NS
Sbjct: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60

Query: 61  NRIRRAASESDIVRSLHEVSNTSDQFSGLASRSLSRSFPSKIPEEEFIDEDDQFDSNSME 120
           + IRRA+SESDI RSLHEVSN  DQF G+ SRS +RS  S+IPEEEF+++ D+FDS+SME
Sbjct: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQ-DEFDSDSME 120

Query: 121 EDKEYLNYRVGV---------------NDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHE 180
           +D   L+  +G                NDR+KIGAYYE +LKLNP+DALLLRNYGKFLHE
Sbjct: 121 DDSGCLDNGIGCSDGAEFFTDMFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHE 180

Query: 181 VANDTKRAEECYSRAILASPTDGELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLV 240
           V  D  R+EECYSRAILA+P+DGELLALYGKLVW++ +DKQRA+YYFDRAV ASPNDCLV
Sbjct: 181 VEKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLV 240

Query: 241 TGHYAHFMWQVEDD-EAALAEDSPAGMVTA 247
            G+YA+F+WQ+EDD E   AE  PA MV A
Sbjct: 241 IGYYAYFLWQIEDDEEQEAAEVWPAAMVAA 269

[Close]

BLAST of Cmc04g0088251 vs. ExPASy TrEMBL
Match: A0A5D3E5U4 (Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004600 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 3.9e-134
Identity = 245/247 (99.19%), Postives = 246/247 (99.60%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTASNNKQPLYGVLSCHNSSASSPRISLHCTRNNSNRIRRAAS 60
           MKSALLRTGSVPLLSPTTTASNNKQPLYGVLSCHNSSASSPRISLHCTRNNSNRIRRAAS
Sbjct: 1   MKSALLRTGSVPLLSPTTTASNNKQPLYGVLSCHNSSASSPRISLHCTRNNSNRIRRAAS 60

Query: 61  ESDIVRSLHEVSNTSDQFSGLASRSLSRSFPSKIPEEEFIDEDDQFDSNSMEEDKEYLNY 120
           ESDIVRSLHEVSNTSDQFSGLASRSLSRSFPSKIPEEEFIDEDDQFDS+SMEEDKEYLNY
Sbjct: 61  ESDIVRSLHEVSNTSDQFSGLASRSLSRSFPSKIPEEEFIDEDDQFDSDSMEEDKEYLNY 120

Query: 121 RVGVNDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDTKRAEECYSRAILASPTDG 180
           RVGVNDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEV NDTKRAEECYSRAILASPTDG
Sbjct: 121 RVGVNDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVVNDTKRAEECYSRAILASPTDG 180

Query: 181 ELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWQVEDDEAALAEDSP 240
           ELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWQVEDDEAALAEDSP
Sbjct: 181 ELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWQVEDDEAALAEDSP 240

Query: 241 AGMVTAC 248
           AGMVTAC
Sbjct: 241 AGMVTAC 247

[Close]

BLAST of Cmc04g0088251 vs. ExPASy TrEMBL
Match: A0A1S3CQ68 (uncharacterized protein LOC103503559 OS=Cucumis melo OX=3656 GN=LOC103503559 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 3.9e-134
Identity = 245/247 (99.19%), Postives = 246/247 (99.60%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTASNNKQPLYGVLSCHNSSASSPRISLHCTRNNSNRIRRAAS 60
           MKSALLRTGSVPLLSPTTTASNNKQPLYGVLSCHNSSASSPRISLHCTRNNSNRIRRAAS
Sbjct: 1   MKSALLRTGSVPLLSPTTTASNNKQPLYGVLSCHNSSASSPRISLHCTRNNSNRIRRAAS 60

Query: 61  ESDIVRSLHEVSNTSDQFSGLASRSLSRSFPSKIPEEEFIDEDDQFDSNSMEEDKEYLNY 120
           ESDIVRSLHEVSNTSDQFSGLASRSLSRSFPSKIPEEEFIDEDDQFDS+SMEEDKEYLNY
Sbjct: 61  ESDIVRSLHEVSNTSDQFSGLASRSLSRSFPSKIPEEEFIDEDDQFDSDSMEEDKEYLNY 120

Query: 121 RVGVNDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDTKRAEECYSRAILASPTDG 180
           RVGVNDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEV NDTKRAEECYSRAILASPTDG
Sbjct: 121 RVGVNDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVVNDTKRAEECYSRAILASPTDG 180

Query: 181 ELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWQVEDDEAALAEDSP 240
           ELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWQVEDDEAALAEDSP
Sbjct: 181 ELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWQVEDDEAALAEDSP 240

Query: 241 AGMVTAC 248
           AGMVTAC
Sbjct: 241 AGMVTAC 247

[Close]

BLAST of Cmc04g0088251 vs. ExPASy TrEMBL
Match: A0A0A0LH65 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G901150 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 8.7e-110
Identity = 220/256 (85.94%), Postives = 233/256 (91.02%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTA----SNNKQPLYGVLSCHNSSASSPR-ISLH-CTRNNSNR 60
           MKSALLRTGSVPLLSPTTT     SNNKQPLYG+ S HNSS SSPR ISLH CTRN+SN 
Sbjct: 1   MKSALLRTGSVPLLSPTTTPSSSFSNNKQPLYGLFSSHNSSTSSPRSISLHYCTRNHSNH 60

Query: 61  IRRAASESDIVRSLHEVSNTSDQFSGLASRSLSR-SFPSKIPEEEFIDED-DQ-FDSNSM 120
           IRRAASESDIVRSLH+VSNTSDQFSGLASRS SR SFPSKIPEEEF++ED DQ FD +SM
Sbjct: 61  IRRAASESDIVRSLHQVSNTSDQFSGLASRSRSRSSFPSKIPEEEFLNEDHDQIFDGDSM 120

Query: 121 EEDKEYLNYRVGVNDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDTKRAEECYSR 180
           EEDK +LN  +G+NDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVAND+KRAEECYSR
Sbjct: 121 EEDKVFLNSPIGINDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDSKRAEECYSR 180

Query: 181 AILASPTDGELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWQVEDD 240
           AILASPTDGELLALYGKLVWDT+RDKQRAQYYFDRAVYASPNDCLVTGHYAHFMW+VE+D
Sbjct: 181 AILASPTDGELLALYGKLVWDTQRDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWEVEED 240

Query: 241 EAAL-AEDSPAGMVTA 247
           EAA  AEDS AGMV A
Sbjct: 241 EAAASAEDSAAGMVRA 256

[Close]

BLAST of Cmc04g0088251 vs. ExPASy TrEMBL
Match: A0A6J1EX26 (uncharacterized protein LOC111437316 OS=Cucurbita moschata OX=3662 GN=LOC111437316 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 2.3e-78
Identity = 168/270 (62.22%), Postives = 204/270 (75.56%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTAS---NNKQPLYGVLSCHNSSASSPRISLHCTRN-----NS 60
           MKSALLRT S+P++ P+ TAS   +N +PL+GV + H SS SSP+ISLH   N     NS
Sbjct: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60

Query: 61  NRIRRAASESDIVRSLHEVSNTSDQFSGLASRSLSRSFPSKIPEEEFIDEDDQFDSNSME 120
           + IRRA+SESDI RSLHEVSN  DQF G+ SRS +RS  S+IPEEEF+++ D+FDS+SME
Sbjct: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQ-DEFDSDSME 120

Query: 121 EDKEYLNYRVGV---------------NDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHE 180
           +D   L+  +G                NDR+KIGAYYE +LKLNP+DALLLRNYGKFLHE
Sbjct: 121 DDSGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHE 180

Query: 181 VANDTKRAEECYSRAILASPTDGELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLV 240
           V  D  R+EECYSRAILA+P+DGELLALYGKLVW++ +DKQRA+YYFDRAV ASPNDCLV
Sbjct: 181 VEKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLV 240

Query: 241 TGHYAHFMWQVEDD-EAALAEDSPAGMVTA 247
            G+YA+F+WQ+EDD E   AE  PA MV A
Sbjct: 241 IGYYAYFLWQIEDDEEEEAAEVWPAAMVAA 269

[Close]

BLAST of Cmc04g0088251 vs. ExPASy TrEMBL
Match: A0A6J1K5B2 (uncharacterized protein LOC111491305 OS=Cucurbita maxima OX=3661 GN=LOC111491305 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 9.7e-77
Identity = 167/270 (61.85%), Postives = 201/270 (74.44%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTAS---NNKQPLYGVLSCHNSSASSPRISLHCTRN-----NS 60
           MKSAL RT S+P++SP+ TAS   +N +PL+GV + H SS SSP+ISL    N     NS
Sbjct: 1   MKSALFRTVSIPVISPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLLFEMNNPRGRNS 60

Query: 61  NRIRRAASESDIVRSLHEVSNTSDQFSGLASRSLSRSFPSKIPEEEFIDEDDQFDSNSME 120
           + IRR +SESDI RSLHEVSN  DQF G+ SRS +RS  S+IPEEEF+++ D+FDS+SME
Sbjct: 61  SGIRRVSSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQ-DEFDSDSME 120

Query: 121 EDKEYLNYRVGV---------------NDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHE 180
           ED   L+  +G                NDR+KIGAYYE +LKLNP+DALLLRNYGKFLHE
Sbjct: 121 EDSGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHE 180

Query: 181 VANDTKRAEECYSRAILASPTDGELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLV 240
           V  D  R+EECYSRAILA+P+DGELLALYGKLVW++ +DKQRA+YYFDRAV ASPNDCLV
Sbjct: 181 VEKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLV 240

Query: 241 TGHYAHFMWQVEDD-EAALAEDSPAGMVTA 247
            G YA+F+WQ+EDD E   AE  PA MV A
Sbjct: 241 IGCYAYFLWQIEDDEEQEAAEVWPAAMVAA 269

[Close]

BLAST of Cmc04g0088251 vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 162.9 bits (411), Expect = 3.2e-40
Identity = 101/265 (38.11%), Postives = 146/265 (55.09%), Query Frame = 0


Query: 1   MKSALLRTGSVPLLSPTTTASNNKQPLYGV--------LSCHNSSASSPRISLHCTRNNS 60
           MKS L+RTGS+P+L     +  + + +  +        LS +    +  +IS+    N  
Sbjct: 1   MKSLLMRTGSMPVLQNRLISGGSSRKMTPISRTNSVESLSSYGERFAGGKISIEVKANVG 60

Query: 61  NRIRRAASESDIVRSLHEVSNTSDQFSGLASRSLSRSFPSKIPEEEFIDEDD-------- 120
             +RR  SESD++RS             +  R  S+  P++IPE++   E++        
Sbjct: 61  --MRRVLSESDVIRS-----------ERMLKRVGSKPSPARIPEDDEAGEEEIRFADGWG 120

Query: 121 -QFDSNSMEEDKEYLNYRV----------------GVNDRSKIGAYYEHMLKLNPSDALL 180
                    E+K +    V                G  D+SKIG YY  ML+ NP+++LL
Sbjct: 121 SMISGGLPVEEKCFTGGGVGGGSGYSGGYGNGGGGGYEDKSKIGDYYREMLRSNPNNSLL 180

Query: 181 LRNYGKFLHEVANDTKRAEECYSRAILASPTDGELLALYGKLVWDTERDKQRAQYYFDRA 233
           L NYGKFL+EV  D + AEE Y RAIL +P DGE L++YG+L+W+T+RD++RAQ YFD+A
Sbjct: 181 LMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGRLIWETKRDEKRAQGYFDQA 240

[Close]

BLAST of Cmc04g0088251 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 3.2e-24
Identity = 84/266 (31.58%), Postives = 123/266 (46.24%), Query Frame = 0


Query: 5   LLRTGSVPLLSPTTTASNNK-QPLYGVLSCH-------------NSSASSPRISLHCTRN 64
           LLR+ S PLL+     S+ +  P+  V S H             +SS     +S+H + +
Sbjct: 2   LLRSASTPLLNSLVHVSSPRDSPIETVESVHQIQRHRSITLSASSSSCCYSPMSVHSSDD 61

Query: 65  NSNRIRRAASESDIVRSLHEVSNTSDQFSGLASRSLSRSFPSKIPEEEFIDEDDQFDSNS 124
           +S R++R AS+SD+    H  S        L+  +L       I             S +
Sbjct: 62  SSRRMKRTASDSDL---RHLTSTKPPVSKFLSGGALMEDVDEGIGFGLIRTSSYDGISWA 121

Query: 125 MEEDKEYLN------YRVGVNDRS------------KIGAYYEHMLKLNPSDALLLRNYG 184
           ++ED E         +  G   RS                +Y  M++ NP + + L NY 
Sbjct: 122 LDEDTEVAGGGGGGMFHGGGKGRSGGRSDGGDGGDDNTDVHYRKMIEANPGNGIFLSNYA 181

Query: 185 KFLHEVANDTKRAEECYSRAILASPTDGELLALYGKLVWDTERDKQRAQYYFDRAVYASP 239
           KFL EV  D  +AEE   RAIL SP DG +LA+Y +LVW   +D  RA+ YF++AV A+P
Sbjct: 182 KFLKEVRKDYLKAEEYCGRAILVSPNDGNVLAMYAELVWKIHKDSSRAENYFNQAVAAAP 241

[Close]

BLAST of Cmc04g0088251 vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 9.4e-24
Identity = 54/114 (47.37%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 130 IGAYYEHMLKLNPSDALLLRNYGKFLHEVANDTKRAEECYSRAILA-SPTDGELLALYGK 189
           +  YYE M++  P D LLL NY +FL EV  D ++AEE   RA+L+ S  DGELL++YG 
Sbjct: 110 VDGYYEEMIQRYPGDTLLLSNYARFLKEVKGDGRKAEEYCERAMLSESGRDGELLSMYGD 169

Query: 190 LVWDTERDKQRAQYYFDRAVYASPNDCLVTGHYAHFMW----QVEDDEAALAED 239
           L+W    D  RAQ Y+D+AV +SP+DC V   YA F+W    +VE++E+   ED
Sbjct: 170 LIWKNHGDGVRAQSYYDQAVQSSPDDCNVLASYARFLWDAEEEVEEEESKHHED 223

[Close]

BLAST of Cmc04g0088251 vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 105.1 bits (261), Expect = 8.0e-23
Identity = 51/108 (47.22%), Postives = 67/108 (62.04%), Query Frame = 0


Query: 133 YYEHMLKLNPSDALLLRNYGKFLHEVANDTKRAEECYSRAILASPTDGELLALYGKLVWD 192
           YY  M+  NP ++LL  NY KFL EV  D K+AEE   RAIL +  DG +L+LY  L+  
Sbjct: 168 YYREMIDSNPGNSLLTGNYAKFLKEVKGDMKKAEEYCERAILGNTNDGNVLSLYADLILH 227

Query: 193 TERDKQRAQYYFDRAVYASPNDCLVTGHYAHFMWQVEDDE--AALAED 239
             +D+QRA  Y+ +AV  SP DC V   YA F+W V++DE   AL E+
Sbjct: 228 NHQDRQRAHSYYKQAVKMSPEDCYVQASYARFLWDVDEDEEDEALGEE 275

[Close]

BLAST of Cmc04g0088251 vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 92.4 bits (228), Expect = 5.3e-19
Identity = 52/129 (40.31%), Postives = 71/129 (55.04%), Query Frame = 0


Query: 104 DQFDSNSMEEDKEYLNYRVGVNDRSKIGAYYEHMLKLNPSDALLLRNYGKFLHEVANDTK 163
           D+FD    E   +   Y     D    G YY+ ML+  P   LLL+NY KFL E   D  
Sbjct: 100 DKFDLYGSEIKFDLPGY-----DDKNCGDYYKGMLEEYPLHPLLLKNYAKFL-EYKGDLS 159

Query: 164 RAEECYSRAILASPTDGELLALYGKLVWDTERDKQRAQYYFDRAVYASPNDCLVTGHYAH 223
            AEE Y +  +  P+DG  LA YG+LV    +D+ +A  YF+RAV ASP+D +V   YA 
Sbjct: 160 GAEEYYHKCTVVEPSDGVALANYGRLVMKLHQDEAKAMSYFERAVQASPDDSIVLAAYAS 219

Query: 224 FMWQVEDDE 233
           F+W++  D+
Sbjct: 220 FLWEINADD 222

The following BLAST results are available for this feature:

BLAST of Cmc04g0088251 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465993.1	8.0e-134	99.19	PREDICTED: uncharacterized protein LOC103503559 [Cucumis melo] >KAA0038565.1 Tet...	[more]
XP_004136396.1	1.8e-109	85.94	uncharacterized protein LOC101218835 [Cucumis sativus] >KGN60369.1 hypothetical ...	[more]
XP_038888361.1	1.6e-86	70.34	uncharacterized protein LOC120078207 [Benincasa hispida]	[more]
XP_022930988.1	4.8e-78	62.22	uncharacterized protein LOC111437316 [Cucurbita moschata] >KAG7036203.1 hypothet...	[more]
XP_023532088.1	4.8e-78	62.22	uncharacterized protein LOC111794359 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc04g0088251 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc04g0088251 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E5U4	3.9e-134	99.19	Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CQ68	3.9e-134	99.19	uncharacterized protein LOC103503559 OS=Cucumis melo OX=3656 GN=LOC103503559 PE=...	[more]
A0A0A0LH65	8.7e-110	85.94	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G901150 ...	[more]
A0A6J1EX26	2.3e-78	62.22	uncharacterized protein LOC111437316 OS=Cucurbita moschata OX=3662 GN=LOC1114373...	[more]
A0A6J1K5B2	9.7e-77	61.85	uncharacterized protein LOC111491305 OS=Cucurbita maxima OX=3661 GN=LOC111491305...	[more]

BLAST of Cmc04g0088251 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17940.1	3.2e-40	38.11	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G20190.1	3.2e-24	31.58	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G32340.1	9.4e-24	47.37	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G80130.1	8.0e-23	47.22	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G04530.1	5.3e-19	40.31	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 107..225 e-value: 2.1E-12 score: 48.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 132..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR26312:SF123	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN	coord: 1..232
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 1..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0088251.1	Cmc04g0088251.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding