MELO3C022364.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C022364.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Ribosome biogenesis NEP1-like protein
Location	chr11: 30712438 .. 30714290 (+)
Sequence length	1496
RNA-Seq Expression	MELO3C022364.1
Synteny	MELO3C022364.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTCCCTTTGCATAACACAGATACTGTATGTGTGTCTAGGTGTGTGTATATTTGTATCTATTTAGTTCGTGTTTTTTATCTACTAAGAAGTTAGTCTTCAAACTTTGGTATGTTACTATTTAGTGTCTCGGTGCTTTGTGAACATTCAAATTTATGATTTTTGTTTTAACCATGAAGAGTGATAGTTGATTAAGAACCAAATGAAGTATGTTGATGGGTTTTTTTTTCTCTCGATAAACTCAAGTTGCTACACAACATATCCTGATGTCAAGGACTTGGCGTCGGGAGAGTGTCCTACAAATACCAATCAGTTTTAGCGCGGCATAGCCTTTTTCCCTCACAAAACATCACATAAAGTTCTTGATTAGGCAACGTAAAAGTAGAGAGTTGAGAAGAGAGATAAAAAAGGTTGTTATTTTGGACGAAAAAGTTGGATATAACTTGAAATTTAGAATGAAAATGGCACAATGTGGGGAGGGGTTGGTTGGACTTGTTAAACTCCTAAAGATATGTGGATATGAAAGACGACGTGTCAGCCCCAAACGTGGAATTGTTAGTTTAAAATTTCCCTATTCTTACTCTAACGTGGCCTTCCATACATTCAATAACCAACCTTTATATATCTCAATCATTCAAACCTCCCTATTTCGTAATTGAACTTCTGAAATCCCACAAAAGAAAATGAGTTTATTCAGAACCTCTCTCGCAGTGAGCCCATCAATCTCTTGTTCTTCTTTTCAATAATGTGTGATTATATTTCCATTTTTTCTCAATTATTATCCATTAATTGTTTAACTAATACATATTACAGAATAAGATGTGGAAATCAATGCTTGTTGGAACTAGGATCCAAGGGAACCGTCGTTTCGCTTCATCCACTACAGCCCCATCTGCCAATGCTTCTTCTTCTTCTTCTTCTTCTTCGAAGTTAATAAACAAAAAACCCATTACGTTGGATATGTAATTAATTGATTAATTTTGATGAGATAACATGACTATGTGTACAGGGGTGGTTCCGGGGGGAGCGAGTACATGAAAGGCGAGTACGCCCCAATCTACATTGTGATGGGAATGGTGGCAGTGGTTGTGTCTATCGCAACCCACACGGCGAAGCAACAACTGCTGCATTCGCCGATGGTTAACTGTAGCAAGAAGAAGAGGGAGAGCATTCCGGAGGTCGAGGACCCCGACACCGTCATCACTTCTGCTGACAAATTTATTAACAAATCCTTTCTTAGGAAGGTTGCTCACATTCAGGATGACACCAAGACGTTACCCGATCCAGTTCATCTCGACCCATTTACCAGGTGAACGACTCTTTGATCTTATTTTACTTATTTTTATAGTGTGTTGATATAATATTACACTTATATTATTAACTTATTACTATTCAAAATCAAGTGTACATTTTCAACAAATCAAAATGGTCGAATGGAAAATTAAGAATACTAATGTACTGCATGGGTGCCCTTGTATTACAGGCCACGTAATGCAGAAACTCTGAAAACTGCTGGAGTTGACCCTACCCGCCGTTGAATAACAACTATGATATGGAAAAAACTTGGACGCTTTCTACAATGCACTAATCATATTGTTCTTAATTATATTAGTTTTTGTTGGTGATATGTGTATTGTTGTGTGTGTATATTTATTTAAAGCCCTTCTCTACTTAATTATGCTTTTCTCTTCACTTTTTTTTTTGTATTGACTGTCAAGCTTCTTCAAAAGTAGAAGTACTACTAGCTACTGCTAGGGAATTTGGCCCCCTTATATAACTTGTTCTTTTAATCTTCTTTTCCGGACAATAAAGCACATTTAATTGGAATACCCTAAATTTTGGTTTTGGGATAA

mRNA sequence

ATATTCCCTTTGCATAACACAGATACTGTATGTGTGTCTAGGTGTGTGTATATTTGTATCTATTTAGTTCGTGTTTTTTATCTACTAAGAAGTTAGTCTTCAAACTTTGGTATGTTACTATTTAGTGTCTCGGTGCTTTGTGAACATTCAAATTTATGATTTTTGTTTTAACCATGAAGAGTGATAGTTGATTAAGAACCAAATGAAGTATGTTGATGGGTTTTTTTTTCTCTCGATAAACTCAAGTTGCTACACAACATATCCTGATGTCAAGGACTTGGCGTCGGGAGAGTGTCCTACAAATACCAATCAGTTTTAGCGCGGCATAGCCTTTTTCCCTCACAAAACATCACATAAAGTTCTTGATTAGGCAACGTAAAAGTAGAGAGTTGAGAAGAGAGATAAAAAAGGTTGTTATTTTGGACGAAAAAGTTGGATATAACTTGAAATTTAGAATGAAAATGGCACAATGTGGGGAGGGGTTGGTTGGACTTGTTAAACTCCTAAAGATATGTGGATATGAAAGACGACGTGTCAGCCCCAAACGTGGAATTGTTAGTTTAAAATTTCCCTATTCTTACTCTAACGTGGCCTTCCATACATTCAATAACCAACCTTTATATATCTCAATCATTCAAACCTCCCTATTTCGTAATTGAACTTCTGAAATCCCACAAAAGAAAATGAGTTTATTCAGAACCTCTCTCGCAAATAAGATGTGGAAATCAATGCTTGTTGGAACTAGGATCCAAGGGAACCGTCGTTTCGCTTCATCCACTACAGCCCCATCTGCCAATGCTTCTTCTTCTTCTTCTTCTTCTTCGAAGGGTGGTTCCGGGGGGAGCGAGTACATGAAAGGCGAGTACGCCCCAATCTACATTGTGATGGGAATGGTGGCAGTGGTTGTGTCTATCGCAACCCACACGGCGAAGCAACAACTGCTGCATTCGCCGATGGTTAACTGTAGCAAGAAGAAGAGGGAGAGCATTCCGGAGGTCGAGGACCCCGACACCGTCATCACTTCTGCTGACAAATTTATTAACAAATCCTTTCTTAGGAAGGTTGCTCACATTCAGGATGACACCAAGACGTTACCCGATCCAGTTCATCTCGACCCATTTACCAGGCCACGTAATGCAGAAACTCTGAAAACTGCTGGAGTTGACCCTACCCGCCGTTGAATAACAACTATGATATGGAAAAAACTTGGACGCTTTCTACAATGCACTAATCATATTGTTCTTAATTATATTAGTTTTTGTTGGTGATATGTGTATTGTTGTGTGTGTATATTTATTTAAAGCCCTTCTCTACTTAATTATGCTTTTCTCTTCACTTTTTTTTTTGTATTGACTGTCAAGCTTCTTCAAAAGTAGAAGTACTACTAGCTACTGCTAGGGAATTTGGCCCCCTTATATAACTTGTTCTTTTAATCTTCTTTTCCGGACAATAAAGCACATTTAATTGGAATACCCTAAATTTTGGTTTTGGGATAA

Coding sequence (CDS)

ATGAGTTTATTCAGAACCTCTCTCGCAAATAAGATGTGGAAATCAATGCTTGTTGGAACTAGGATCCAAGGGAACCGTCGTTTCGCTTCATCCACTACAGCCCCATCTGCCAATGCTTCTTCTTCTTCTTCTTCTTCTTCGAAGGGTGGTTCCGGGGGGAGCGAGTACATGAAAGGCGAGTACGCCCCAATCTACATTGTGATGGGAATGGTGGCAGTGGTTGTGTCTATCGCAACCCACACGGCGAAGCAACAACTGCTGCATTCGCCGATGGTTAACTGTAGCAAGAAGAAGAGGGAGAGCATTCCGGAGGTCGAGGACCCCGACACCGTCATCACTTCTGCTGACAAATTTATTAACAAATCCTTTCTTAGGAAGGTTGCTCACATTCAGGATGACACCAAGACGTTACCCGATCCAGTTCATCTCGACCCATTTACCAGGCCACGTAATGCAGAAACTCTGAAAACTGCTGGAGTTGACCCTACCCGCCGTTGA

Protein sequence

MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTKTLPDPVHLDPFTRPRNAETLKTAGVDPTRR

Homology

[Close]

BLAST of MELO3C022364.1 vs. NCBI nr
Match: XP_008459927.1 (PREDICTED: uncharacterized protein LOC103498899 [Cucumis melo])

HSP 1 Score: 313.5 bits (802), Expect = 1.1e-81
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGE 60
           MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGE
Sbjct: 1   MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGE 60

Query: 61  YAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFIN 120
           YAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFIN
Sbjct: 61  YAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFIN 120

Query: 121 KSFLRKVAHIQDDTKTLPDPVHLDPFTRPRNAETLKTAGVDPTRR 166
           KSFLRKVAHIQDDTKTLPDPVHLDPFTRPRNAETLKTAGVDPTRR
Sbjct: 121 KSFLRKVAHIQDDTKTLPDPVHLDPFTRPRNAETLKTAGVDPTRR 165

[Close]

BLAST of MELO3C022364.1 vs. NCBI nr
Match: XP_004140656.2 (uncharacterized protein LOC101206372 [Cucumis sativus] >KGN46404.1 hypothetical protein Csa_005593 [Cucumis sativus])

HSP 1 Score: 285.0 bits (728), Expect = 4.0e-73
Identity = 153/168 (91.07%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 1   MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSAN---ASSSSSSSSKGGSGGSEYM 60
           M LFRTSLANKMWKSMLV TRIQGNRRF+SSTT PSAN    +SS SSSS GGSGGSEYM
Sbjct: 1   MGLFRTSLANKMWKSMLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYM 60

Query: 61  KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADK 120
           KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADK
Sbjct: 61  KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADK 120

Query: 121 FINKSFLRKVAHIQDDTKTLPDPVHLDPFTRPRNAETLKTAGVDPTRR 166
           FINKSFLRKVAHIQ DTKTL DPVH DPFTRPRNAETLKTAG+DPTRR
Sbjct: 121 FINKSFLRKVAHIQSDTKTLSDPVHPDPFTRPRNAETLKTAGIDPTRR 168

[Close]

BLAST of MELO3C022364.1 vs. NCBI nr
Match: ADN33694.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 284.6 bits (727), Expect = 5.3e-73
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 16  MLVGTRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGEYAPIYIVMGMVAVVV 75
           MLVGTRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGEYAPIYIVMGMVAVVV
Sbjct: 1   MLVGTRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGEYAPIYIVMGMVAVVV 60

Query: 76  SIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTK 135
           SIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTK
Sbjct: 61  SIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTK 120

Query: 136 TLPDPVHLDPFTRPRNAETLKTAGVDPTRR 166
           TLPDPVHLDPFTRPRNAETLKTAGVDPTRR
Sbjct: 121 TLPDPVHLDPFTRPRNAETLKTAGVDPTRR 150

[Close]

BLAST of MELO3C022364.1 vs. NCBI nr
Match: KAA0039866.1 (putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa] >TYK24635.1 putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 274.2 bits (700), Expect = 7.1e-70
Identity = 148/151 (98.01%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 16  MLVGTRIQGNRRFASSTTAPSANA-SSSSSSSSKGGSGGSEYMKGEYAPIYIVMGMVAVV 75
           MLVGTRIQGNRRFASSTTAPSANA SSSSSSSSKGGSG SEYMKGEYAPIYIVMGMVAVV
Sbjct: 1   MLVGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVV 60

Query: 76  VSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDT 135
           VSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDT
Sbjct: 61  VSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDT 120

Query: 136 KTLPDPVHLDPFTRPRNAETLKTAGVDPTRR 166
           KTLPDPVH DPFTRPRNAETLKTAGVDPTRR
Sbjct: 121 KTLPDPVHPDPFTRPRNAETLKTAGVDPTRR 151

[Close]

BLAST of MELO3C022364.1 vs. NCBI nr
Match: XP_038906484.1 (uncharacterized protein LOC120092464 [Benincasa hispida])

HSP 1 Score: 264.2 bits (674), Expect = 7.4e-67
Identity = 141/171 (82.46%), Postives = 154/171 (90.06%), Query Frame = 0


Query: 1   MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSAN------ASSSSSSSSKGGSGGS 60
           M+LF TSL NK+WK+MLVG+RIQG RR ASSTTAP+AN      +SSSSSSSSKGGS  S
Sbjct: 1   MALFTTSLTNKVWKAMLVGSRIQGKRRLASSTTAPAANNIQKASSSSSSSSSSKGGSSSS 60

Query: 61  EYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITS 120
           EYMKGEYAPIYIV+GMVAV VSI THTAKQQLLHSP+VN SKKKRESIPEV+DPDT+I S
Sbjct: 61  EYMKGEYAPIYIVVGMVAVAVSIGTHTAKQQLLHSPVVNFSKKKRESIPEVDDPDTIINS 120

Query: 121 ADKFINKSFLRKVAHIQDDTKTLPDPVHLDPFTRPRNAETLKTAGVDPTRR 166
           A+KFINKSFLRKVAHIQ+DTKTLPDPVH +PFTRPRNAETLKTAGVDPTRR
Sbjct: 121 ANKFINKSFLRKVAHIQEDTKTLPDPVHPNPFTRPRNAETLKTAGVDPTRR 171

[Close]

BLAST of MELO3C022364.1 vs. ExPASy TrEMBL
Match: A0A1S3CBE5 (uncharacterized protein LOC103498899 OS=Cucumis melo OX=3656 GN=LOC103498899 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 5.1e-82
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGE 60
           MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGE
Sbjct: 1   MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGE 60

Query: 61  YAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFIN 120
           YAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFIN
Sbjct: 61  YAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFIN 120

Query: 121 KSFLRKVAHIQDDTKTLPDPVHLDPFTRPRNAETLKTAGVDPTRR 166
           KSFLRKVAHIQDDTKTLPDPVHLDPFTRPRNAETLKTAGVDPTRR
Sbjct: 121 KSFLRKVAHIQDDTKTLPDPVHLDPFTRPRNAETLKTAGVDPTRR 165

[Close]

BLAST of MELO3C022364.1 vs. ExPASy TrEMBL
Match: A0A0A0KC39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091280 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.0e-73
Identity = 153/168 (91.07%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 1   MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSAN---ASSSSSSSSKGGSGGSEYM 60
           M LFRTSLANKMWKSMLV TRIQGNRRF+SSTT PSAN    +SS SSSS GGSGGSEYM
Sbjct: 1   MGLFRTSLANKMWKSMLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYM 60

Query: 61  KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADK 120
           KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADK
Sbjct: 61  KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADK 120

Query: 121 FINKSFLRKVAHIQDDTKTLPDPVHLDPFTRPRNAETLKTAGVDPTRR 166
           FINKSFLRKVAHIQ DTKTL DPVH DPFTRPRNAETLKTAG+DPTRR
Sbjct: 121 FINKSFLRKVAHIQSDTKTLSDPVHPDPFTRPRNAETLKTAGIDPTRR 168

[Close]

BLAST of MELO3C022364.1 vs. ExPASy TrEMBL
Match: E5GB52 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.5e-73
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 16  MLVGTRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGEYAPIYIVMGMVAVVV 75
           MLVGTRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGEYAPIYIVMGMVAVVV
Sbjct: 1   MLVGTRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGEYAPIYIVMGMVAVVV 60

Query: 76  SIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTK 135
           SIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTK
Sbjct: 61  SIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTK 120

Query: 136 TLPDPVHLDPFTRPRNAETLKTAGVDPTRR 166
           TLPDPVHLDPFTRPRNAETLKTAGVDPTRR
Sbjct: 121 TLPDPVHLDPFTRPRNAETLKTAGVDPTRR 150

[Close]

BLAST of MELO3C022364.1 vs. ExPASy TrEMBL
Match: A0A5D3DLZ1 (Putative Ribosome biogenesis protein NEP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001820 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.4e-70
Identity = 148/151 (98.01%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 16  MLVGTRIQGNRRFASSTTAPSANA-SSSSSSSSKGGSGGSEYMKGEYAPIYIVMGMVAVV 75
           MLVGTRIQGNRRFASSTTAPSANA SSSSSSSSKGGSG SEYMKGEYAPIYIVMGMVAVV
Sbjct: 1   MLVGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVV 60

Query: 76  VSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDT 135
           VSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDT
Sbjct: 61  VSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDT 120

Query: 136 KTLPDPVHLDPFTRPRNAETLKTAGVDPTRR 166
           KTLPDPVH DPFTRPRNAETLKTAGVDPTRR
Sbjct: 121 KTLPDPVHPDPFTRPRNAETLKTAGVDPTRR 151

[Close]

BLAST of MELO3C022364.1 vs. ExPASy TrEMBL
Match: A0A6J1D5I0 (uncharacterized protein LOC111017496 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017496 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 5.0e-53
Identity = 122/155 (78.71%), Postives = 129/155 (83.23%), Query Frame = 0


Query: 11  KMWKSMLVG--TRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGEYAPIYIVM 70
           K+WKSMLVG  +RI+G R FASSTTA       SSSSSSK     SEYMKGEYAPIYIVM
Sbjct: 7   KLWKSMLVGIPSRIEGKRCFASSTTA-------SSSSSSK-----SEYMKGEYAPIYIVM 66

Query: 71  GMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVA 130
           GMV V V+I THTAKQQLLHSP+V  SKKKRESIPEV+DPDTVITSADKF+NKSFLRKVA
Sbjct: 67  GMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVA 126

Query: 131 HIQDDTKTLPDPVHLDPFTRPRNAETLKTAGVDPT 164
           HIQD  KTL DP H DPFTRPRNAETLKTAGVDPT
Sbjct: 127 HIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT 149

[Close]

BLAST of MELO3C022364.1 vs. TAIR 10
Match: AT1G63060.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07330.1); Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-25
Identity = 66/146 (45.21%), Postives = 93/146 (63.70%), Query Frame = 0


Query: 18  VGTRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGEYAPIYIVMGMVAVVVSI 77
           VG +  G+RRFA +T A  A  + +  S           + GE+AP+ I+ G V + V +
Sbjct: 12  VGNQFGGSRRFA-TTVADGAKQTYNKFS-----------IMGEFAPVAIIGGFVGLAVLM 71

Query: 78  ATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTKT- 137
           A H+ KQQL+H+P ++  K +R ++ EV+DP+  ++SADKFINKS+LRKV  IQD +K  
Sbjct: 72  AGHSLKQQLMHAPAISTRKNRRAAVAEVDDPENCVSSADKFINKSWLRKVGQIQDKSKAI 131

Query: 138 LPDPVHLDPFTRPRNAETLKTAGVDP 163
           L DP   +PFT PRNAETL + GV P
Sbjct: 132 LSDPTRPNPFTTPRNAETLNSVGVAP 145

[Close]

BLAST of MELO3C022364.1 vs. TAIR 10
Match: AT5G07330.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G63060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 95.5 bits (236), Expect = 4.2e-20
Identity = 53/145 (36.55%), Postives = 87/145 (60.00%), Query Frame = 0


Query: 22  IQGNRRFASSTTAPSANASSSSSSSSKG--GSGGSEYMKGEYAPIYIVMGMVAVVVSIAT 81
           +Q  R +  +TT P + A S++++   G   +  +   KG++ P+Y+ +G++++ V+   
Sbjct: 13  VQRLRTYTKATTVPRSKAYSTAATEYGGQRTATTAAATKGDFTPVYVSIGLISLSVTFGV 72

Query: 82  HTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQ--DDTKTL 141
           +TA   L  +P V  +KK RE++PE+EDPD V+  AD+F N+S+ RK+AH+Q  D    +
Sbjct: 73  YTAYLHLHENPGVRVNKKMRETVPEIEDPDRVLNEADRFANRSWFRKIAHVQEFDKQDVI 132

Query: 142 PDPVHLDPFTRPRNAETLKTAGVDP 163
            DP+  D F     A TLK  GVDP
Sbjct: 133 SDPIRKDQFAHKPRALTLKDVGVDP 157

The following BLAST results are available for this feature:

BLAST of MELO3C022364.1 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C022364.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459927.1	1.1e-81	100.00	PREDICTED: uncharacterized protein LOC103498899 [Cucumis melo]	[more]
XP_004140656.2	4.0e-73	91.07	uncharacterized protein LOC101206372 [Cucumis sativus] >KGN46404.1 hypothetical ...	[more]
ADN33694.1	5.3e-73	100.00	hypothetical protein [Cucumis melo subsp. melo]	[more]
KAA0039866.1	7.1e-70	98.01	putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa] >TYK24...	[more]
XP_038906484.1	7.4e-67	82.46	uncharacterized protein LOC120092464 [Benincasa hispida]	[more]

BLAST of MELO3C022364.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CBE5	5.1e-82	100.00	uncharacterized protein LOC103498899 OS=Cucumis melo OX=3656 GN=LOC103498899 PE=...	[more]
A0A0A0KC39	2.0e-73	91.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091280 PE=4 SV=1	[more]
E5GB52	2.5e-73	100.00	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5D3DLZ1	3.4e-70	98.01	Putative Ribosome biogenesis protein NEP1-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1D5I0	5.0e-53	78.71	uncharacterized protein LOC111017496 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of MELO3C022364.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63060.1	1.5e-25	45.21	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G07330.1	4.2e-20	36.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..53
None	No IPR available	PANTHER	PTHR33919	OS09G0127700 PROTEIN	coord: 6..163
None	No IPR available	PANTHER	PTHR33919:SF9	RIBOSOME BIOGENESIS NEP1-LIKE PROTEIN	coord: 6..163

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C022364	MELO3C022364	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C022364.1:exon:338365	MELO3C022364.1:exon:338365	exon
MELO3C022364.1:exon:338366	MELO3C022364.1:exon:338366	exon
MELO3C022364.1:exon:338367	MELO3C022364.1:exon:338367	exon
MELO3C022364.1:exon:338368	MELO3C022364.1:exon:338368	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C022364.1:five_prime_utr	MELO3C022364.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C022364.1:cds	MELO3C022364.1:cds	CDS
MELO3C022364.1:cds	MELO3C022364.1:cds_2	CDS
MELO3C022364.1:cds	MELO3C022364.1:cds_3	CDS
MELO3C022364.1:cds	MELO3C022364.1:cds_4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C022364.1:three_prime_utr	MELO3C022364.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C022364.1	MELO3C022364.1-protein	polypeptide