Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCTACCTAGCTGAAGTTCCCGACTCCATCTGCTTCTTGGAGTCCCGTCTCGAAGAGATTGCTGAGAAAACTGACACAATCGATGCGGTAGCTGGCCGTGTCGAAGGATTACCAATACAAGAGTTGTTGGCAAGAGTTGACACTCTAGAAGGAAACGTTGGAAGAATTGTTAACTACGAATATGGGGACAGTTTTTCGGGCCTTGTTTCCCACATGGAAGAACGTGCCAATGAGCTAGATAGTTCCCAGAAGACACTCTTAGAGATGATAAACGTCATGTCGGAGGATTTTCGAGTCACCCTCGATGTCATCAGAAATGAAATCGTAGATGTGAACGCGAGACTGAATCTCACAGTGCAAGAGATGCAAAGCCCTTCTGTAGGACAAGAGATGCAAGGGCCCTGGAGAACTATATTTTTGACCTCGAACAACACTTCAGGGCCACGAACAAAGTTACTGAGGAAGTCAAAGTTACACTGGCAATGTTGTACGATAGATACTTGGGATGCCTTAAAGAAAGAACTCCGCTCATAA
mRNA sequence
ATGCTCTACCTAGCTGAAGTTCCCGACTCCATCTGCTTCTTGGAGTCCCGTCTCGAAGAGATTGCTGAGAAAACTGACACAATCGATGCGGTAGCTGGCCGTGTCGAAGGATTACCAATACAAGAGTTGTTGGCAAGAGTTGACACTCTAGAAGGAAACGTTGGAAGAATTGTTAACTACGAATATGGGGACAGTTTTTCGGGCCTTGTTTCCCACATGGAAGAACGTGCCAATGAGCTAGATAGTTCCCAGAAGACACTCTTAGAGATGATAAACGTCATGTCGGAGGATTTTCGAGTCACCCTCGATGTCATCAGAAATGAAATCGTAGATGTGAACGCGAGACTGAATCTCACAGTGCAAGAGATGCAAAGCCCTTCTGTAGGACAAGAGATGCAAGGGCCCTGGAGAACTATATTTTTGACCTCGAACAACACTTCAGGGCCACGAACAAAGTTACTGAGGAAGTCAAAGTTACACTGGCAATGTTGTACGATAGATACTTGGGATGCCTTAAAGAAAGAACTCCGCTCATAA
Coding sequence (CDS)
ATGCTCTACCTAGCTGAAGTTCCCGACTCCATCTGCTTCTTGGAGTCCCGTCTCGAAGAGATTGCTGAGAAAACTGACACAATCGATGCGGTAGCTGGCCGTGTCGAAGGATTACCAATACAAGAGTTGTTGGCAAGAGTTGACACTCTAGAAGGAAACGTTGGAAGAATTGTTAACTACGAATATGGGGACAGTTTTTCGGGCCTTGTTTCCCACATGGAAGAACGTGCCAATGAGCTAGATAGTTCCCAGAAGACACTCTTAGAGATGATAAACGTCATGTCGGAGGATTTTCGAGTCACCCTCGATGTCATCAGAAATGAAATCGTAGATGTGAACGCGAGACTGAATCTCACAGTGCAAGAGATGCAAAGCCCTTCTGTAGGACAAGAGATGCAAGGGCCCTGGAGAACTATATTTTTGACCTCGAACAACACTTCAGGGCCACGAACAAAGTTACTGAGGAAGTCAAAGTTACACTGGCAATGTTGTACGATAGATACTTGGGATGCCTTAAAGAAAGAACTCCGCTCATAA
Protein sequence
MLYLAEVPDSICFLESRLEEIAEKTDTIDAVAGRVEGLPIQELLARVDTLEGNVGRIVNYEYGDSFSGLVSHMEERANELDSSQKTLLEMINVMSEDFRVTLDVIRNEIVDVNARLNLTVQEMQSPSVGQEMQGPWRTIFLTSNNTSGPRTKLLRKSKLHWQCCTIDTWDALKKELRS
Homology
BLAST of MELO3C032714 vs. NCBI nr
Match:
KAA0046343.1 (uncharacterized protein E6C27_scaffold149G00520 [Cucumis melo var. makuwa] >TYK30507.1 uncharacterized protein E5676_scaffold426G00500 [Cucumis melo var. makuwa])
HSP 1 Score: 236.9 bits (603), Expect = 1.4e-58
Identity = 126/181 (69.61%), Postives = 142/181 (78.45%), Query Frame = 0
Query: 1 MLYLAEVPDSICFLESRLEEIAEKTDTIDAVAGRVEGLPIQELLARVDTLEGNVGRIVNY 60
MLYLAEVPDSI FLESRLEEI EKTDTID VAGRVEGLPIQELLARV+TLEGN+ R V+Y
Sbjct: 22 MLYLAEVPDSIRFLESRLEEITEKTDTIDVVAGRVEGLPIQELLARVNTLEGNIRRTVSY 81
Query: 61 EYGDSFSGLVSHMEERANELDSSQKTLLEMINVMSEDFRVTLDVIRNEIVDVNARLNLTV 120
EYGDS SG V+HMEER NELDSSQKTLLE+IN MSEDFR TLDV+RNEI DVNARLN+T+
Sbjct: 82 EYGDSSSGFVAHMEERINELDSSQKTLLEIINNMSEDFRATLDVVRNEIADVNARLNITI 141
Query: 121 QEMQS-------------------PSVGQEMQGPWRTIFLTSNNTSGPRTKLLRKSKLHW 163
+ + + P GQEMQ PW+TIFLT ++TS P+T L +KSKLHW
Sbjct: 142 RAIANQAPAGGAILVIRVKILEPKPFCGQEMQRPWKTIFLTLSSTSWPQTWLSKKSKLHW 201
BLAST of MELO3C032714 vs. NCBI nr
Match:
TYK01393.1 (uncharacterized protein E5676_scaffold29G00870 [Cucumis melo var. makuwa])
HSP 1 Score: 212.2 bits (539), Expect = 3.6e-51
Identity = 124/196 (63.27%), Postives = 139/196 (70.92%), Query Frame = 0
Query: 1 MLYLAEVPDSICFLESRLEEIAEKTDTIDAVAGRVEGLPIQELLARVDTLEGNVGRIVNY 60
MLYL EVPDSI +LESRL+EI+EKTDTIDAVAGRVEGLPIQELLARVDTLE + R VNY
Sbjct: 1 MLYLVEVPDSIRYLESRLDEISEKTDTIDAVAGRVEGLPIQELLARVDTLEQTLERTVNY 60
Query: 61 EYGDSFSGLVSHMEERANELDSSQKTLLEMINVMSEDFRVTLDVIRNEIVDVNARLNLTV 120
E GDS SG +HMEE +ELDSSQKTLLEMIN MSEDFRVTLDVIRNEI +VNARLNLT+
Sbjct: 61 ERGDSSSGFAAHMEEHVSELDSSQKTLLEMINGMSEDFRVTLDVIRNEIANVNARLNLTM 120
Query: 121 QEM--QSPSVGQEMQGPWRTIFLTSNNTSGPRTK-------LLRKSKLHWQ--------- 179
+ M Q+P G + + NT K L +KL W+
Sbjct: 121 RAMANQAPVGG-------AISYFKATNTVTEEAKVTLATMHLSEDAKLWWRSRYVDIQEG 180
BLAST of MELO3C032714 vs. NCBI nr
Match:
KAA0036436.1 (uncharacterized protein E6C27_scaffold147G00010 [Cucumis melo var. makuwa] >TYK00051.1 uncharacterized protein E5676_scaffold360G001010 [Cucumis melo var. makuwa])
HSP 1 Score: 211.1 bits (536), Expect = 8.0e-51
Identity = 119/178 (66.85%), Postives = 127/178 (71.35%), Query Frame = 0
Query: 1 MLYLAEVPDSICFLESRLEEIAEKTDTIDAVAGRVEGLPIQELLARVDTLEGNVGRIVNY 60
MLYLAEV DSICFLESRL+ IAEKTDTID VAGRVEGLPIQELLARVDTLE NVG+ VNY
Sbjct: 1 MLYLAEVSDSICFLESRLKVIAEKTDTIDTVAGRVEGLPIQELLARVDTLEANVGKSVNY 60
Query: 61 EYGDSFSGLVSHMEERANELDSSQKTLLEMINVMSEDFRVTLDVIRNEIVDVNARLNLTV 120
EYGDS SG+V+HMEER NELDSSQK LLEMIN MSEDFR TLDV+RN+I DVN RLNLT+
Sbjct: 61 EYGDSSSGIVAHMEERVNELDSSQKMLLEMINDMSEDFRATLDVVRNKIADVNTRLNLTM 120
Query: 121 QEMQSPSVGQEMQGPWRTIFLTSNNTSGPRTKLLRKSKLHWQCCTIDTWDALKKELRS 179
Q M QE +G CTIDTWD LKKEL S
Sbjct: 121 QAM----ANQEEKG-----------------------------CTIDTWDVLKKELCS 145
BLAST of MELO3C032714 vs. NCBI nr
Match:
KAA0040304.1 (uncharacterized protein E6C27_scaffold460G00040 [Cucumis melo var. makuwa] >TYK23401.1 uncharacterized protein E5676_scaffold142G004680 [Cucumis melo var. makuwa])
HSP 1 Score: 204.5 bits (519), Expect = 7.5e-49
Identity = 118/187 (63.10%), Postives = 136/187 (72.73%), Query Frame = 0
Query: 1 MLYLAEVPDSICFLESRLEEIAEKTDTIDAVAGRVEGLPIQELLARVDTLEGNVGRIVNY 60
MLYLAEVPDSI FLESRL+EI EKTD IDAVAG VEGLPIQELL RVDTLEGNVGR VNY
Sbjct: 22 MLYLAEVPDSIRFLESRLKEITEKTDIIDAVAGSVEGLPIQELLVRVDTLEGNVGRTVNY 81
Query: 61 EYGDSFSGLVSHMEERANELDSSQKTLLEMINVMSEDFRVTLDVIRNEIVDVNARLNLTV 120
EY DS SG V HMEE +ELDSSQKTLLEMI+ MSEDFR TL+V+RNEI DVNARLNLT+
Sbjct: 82 EYRDSSSGFVDHMEECVDELDSSQKTLLEMISGMSEDFRDTLNVVRNEIADVNARLNLTM 141
Query: 121 QEMQSPSVGQEMQGPWRTIFLTSNNTSGPRTKLLRKSKLHWQC---------CTIDTWDA 179
+ + + +E T+ + + + L + +KL + CTIDTWDA
Sbjct: 142 RAIVNQLQLEEQFRATNTV-IEEDKVTLAMMHLSQDAKLWCRFRYVDMQKGRCTIDTWDA 201
BLAST of MELO3C032714 vs. NCBI nr
Match:
KAA0035434.1 (senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa] >TYK25718.1 senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa])
HSP 1 Score: 204.1 bits (518), Expect = 9.8e-49
Identity = 106/132 (80.30%), Postives = 118/132 (89.39%), Query Frame = 0
Query: 1 MLYLAEVPDSICFLESRLEEIAEKTDTIDAVAGRVEGLPIQELLARVDTLEGNVGRIVNY 60
MLYLAEVPDSICFLESRL+EIAEKTDTIDA+A RV+GLPIQELLARVDTLEGN+GRIVNY
Sbjct: 1 MLYLAEVPDSICFLESRLKEIAEKTDTIDAIASRVKGLPIQELLARVDTLEGNIGRIVNY 60
Query: 61 EYGDSFSGLVSHMEERANELDSSQKTLLEMINVMSEDFRVTLDVIRNEIVDVNARLNLTV 120
EY DS SG V+HMEER NELDSSQKTLLEMIN M EDFR T+DV+RNEI DVN RLNLTV
Sbjct: 61 EYRDSSSGFVTHMEERVNELDSSQKTLLEMINDMLEDFRATVDVVRNEIADVNVRLNLTV 120
Query: 121 QEM--QSPSVGQ 131
+ + Q+P+ G+
Sbjct: 121 RAIANQAPAGGE 132
BLAST of MELO3C032714 vs. ExPASy TrEMBL
Match:
A0A5D3E355 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00500 PE=4 SV=1)
HSP 1 Score: 236.9 bits (603), Expect = 6.6e-59
Identity = 126/181 (69.61%), Postives = 142/181 (78.45%), Query Frame = 0
Query: 1 MLYLAEVPDSICFLESRLEEIAEKTDTIDAVAGRVEGLPIQELLARVDTLEGNVGRIVNY 60
MLYLAEVPDSI FLESRLEEI EKTDTID VAGRVEGLPIQELLARV+TLEGN+ R V+Y
Sbjct: 22 MLYLAEVPDSIRFLESRLEEITEKTDTIDVVAGRVEGLPIQELLARVNTLEGNIRRTVSY 81
Query: 61 EYGDSFSGLVSHMEERANELDSSQKTLLEMINVMSEDFRVTLDVIRNEIVDVNARLNLTV 120
EYGDS SG V+HMEER NELDSSQKTLLE+IN MSEDFR TLDV+RNEI DVNARLN+T+
Sbjct: 82 EYGDSSSGFVAHMEERINELDSSQKTLLEIINNMSEDFRATLDVVRNEIADVNARLNITI 141
Query: 121 QEMQS-------------------PSVGQEMQGPWRTIFLTSNNTSGPRTKLLRKSKLHW 163
+ + + P GQEMQ PW+TIFLT ++TS P+T L +KSKLHW
Sbjct: 142 RAIANQAPAGGAILVIRVKILEPKPFCGQEMQRPWKTIFLTLSSTSWPQTWLSKKSKLHW 201
BLAST of MELO3C032714 vs. ExPASy TrEMBL
Match:
A0A5D3BNW0 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00870 PE=4 SV=1)
HSP 1 Score: 212.2 bits (539), Expect = 1.7e-51
Identity = 124/196 (63.27%), Postives = 139/196 (70.92%), Query Frame = 0
Query: 1 MLYLAEVPDSICFLESRLEEIAEKTDTIDAVAGRVEGLPIQELLARVDTLEGNVGRIVNY 60
MLYL EVPDSI +LESRL+EI+EKTDTIDAVAGRVEGLPIQELLARVDTLE + R VNY
Sbjct: 1 MLYLVEVPDSIRYLESRLDEISEKTDTIDAVAGRVEGLPIQELLARVDTLEQTLERTVNY 60
Query: 61 EYGDSFSGLVSHMEERANELDSSQKTLLEMINVMSEDFRVTLDVIRNEIVDVNARLNLTV 120
E GDS SG +HMEE +ELDSSQKTLLEMIN MSEDFRVTLDVIRNEI +VNARLNLT+
Sbjct: 61 ERGDSSSGFAAHMEEHVSELDSSQKTLLEMINGMSEDFRVTLDVIRNEIANVNARLNLTM 120
Query: 121 QEM--QSPSVGQEMQGPWRTIFLTSNNTSGPRTK-------LLRKSKLHWQ--------- 179
+ M Q+P G + + NT K L +KL W+
Sbjct: 121 RAMANQAPVGG-------AISYFKATNTVTEEAKVTLATMHLSEDAKLWWRSRYVDIQEG 180
BLAST of MELO3C032714 vs. ExPASy TrEMBL
Match:
A0A5A7T2X9 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G001010 PE=4 SV=1)
HSP 1 Score: 211.1 bits (536), Expect = 3.9e-51
Identity = 119/178 (66.85%), Postives = 127/178 (71.35%), Query Frame = 0
Query: 1 MLYLAEVPDSICFLESRLEEIAEKTDTIDAVAGRVEGLPIQELLARVDTLEGNVGRIVNY 60
MLYLAEV DSICFLESRL+ IAEKTDTID VAGRVEGLPIQELLARVDTLE NVG+ VNY
Sbjct: 1 MLYLAEVSDSICFLESRLKVIAEKTDTIDTVAGRVEGLPIQELLARVDTLEANVGKSVNY 60
Query: 61 EYGDSFSGLVSHMEERANELDSSQKTLLEMINVMSEDFRVTLDVIRNEIVDVNARLNLTV 120
EYGDS SG+V+HMEER NELDSSQK LLEMIN MSEDFR TLDV+RN+I DVN RLNLT+
Sbjct: 61 EYGDSSSGIVAHMEERVNELDSSQKMLLEMINDMSEDFRATLDVVRNKIADVNTRLNLTM 120
Query: 121 QEMQSPSVGQEMQGPWRTIFLTSNNTSGPRTKLLRKSKLHWQCCTIDTWDALKKELRS 179
Q M QE +G CTIDTWD LKKEL S
Sbjct: 121 QAM----ANQEEKG-----------------------------CTIDTWDVLKKELCS 145
BLAST of MELO3C032714 vs. ExPASy TrEMBL
Match:
A0A5A7T9Z3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G004680 PE=4 SV=1)
HSP 1 Score: 204.5 bits (519), Expect = 3.6e-49
Identity = 118/187 (63.10%), Postives = 136/187 (72.73%), Query Frame = 0
Query: 1 MLYLAEVPDSICFLESRLEEIAEKTDTIDAVAGRVEGLPIQELLARVDTLEGNVGRIVNY 60
MLYLAEVPDSI FLESRL+EI EKTD IDAVAG VEGLPIQELL RVDTLEGNVGR VNY
Sbjct: 22 MLYLAEVPDSIRFLESRLKEITEKTDIIDAVAGSVEGLPIQELLVRVDTLEGNVGRTVNY 81
Query: 61 EYGDSFSGLVSHMEERANELDSSQKTLLEMINVMSEDFRVTLDVIRNEIVDVNARLNLTV 120
EY DS SG V HMEE +ELDSSQKTLLEMI+ MSEDFR TL+V+RNEI DVNARLNLT+
Sbjct: 82 EYRDSSSGFVDHMEECVDELDSSQKTLLEMISGMSEDFRDTLNVVRNEIADVNARLNLTM 141
Query: 121 QEMQSPSVGQEMQGPWRTIFLTSNNTSGPRTKLLRKSKLHWQC---------CTIDTWDA 179
+ + + +E T+ + + + L + +KL + CTIDTWDA
Sbjct: 142 RAIVNQLQLEEQFRATNTV-IEEDKVTLAMMHLSQDAKLWCRFRYVDMQKGRCTIDTWDA 201
BLAST of MELO3C032714 vs. ExPASy TrEMBL
Match:
A0A5A7SVW0 (Senescence-specific cysteine protease sag39 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00080 PE=4 SV=1)
HSP 1 Score: 204.1 bits (518), Expect = 4.7e-49
Identity = 106/132 (80.30%), Postives = 118/132 (89.39%), Query Frame = 0
Query: 1 MLYLAEVPDSICFLESRLEEIAEKTDTIDAVAGRVEGLPIQELLARVDTLEGNVGRIVNY 60
MLYLAEVPDSICFLESRL+EIAEKTDTIDA+A RV+GLPIQELLARVDTLEGN+GRIVNY
Sbjct: 1 MLYLAEVPDSICFLESRLKEIAEKTDTIDAIASRVKGLPIQELLARVDTLEGNIGRIVNY 60
Query: 61 EYGDSFSGLVSHMEERANELDSSQKTLLEMINVMSEDFRVTLDVIRNEIVDVNARLNLTV 120
EY DS SG V+HMEER NELDSSQKTLLEMIN M EDFR T+DV+RNEI DVN RLNLTV
Sbjct: 61 EYRDSSSGFVTHMEERVNELDSSQKTLLEMINDMLEDFRATVDVVRNEIADVNVRLNLTV 120
Query: 121 QEM--QSPSVGQ 131
+ + Q+P+ G+
Sbjct: 121 RAIANQAPAGGE 132
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0046343.1 | 1.4e-58 | 69.61 | uncharacterized protein E6C27_scaffold149G00520 [Cucumis melo var. makuwa] >TYK3... | [more] |
TYK01393.1 | 3.6e-51 | 63.27 | uncharacterized protein E5676_scaffold29G00870 [Cucumis melo var. makuwa] | [more] |
KAA0036436.1 | 8.0e-51 | 66.85 | uncharacterized protein E6C27_scaffold147G00010 [Cucumis melo var. makuwa] >TYK0... | [more] |
KAA0040304.1 | 7.5e-49 | 63.10 | uncharacterized protein E6C27_scaffold460G00040 [Cucumis melo var. makuwa] >TYK2... | [more] |
KAA0035434.1 | 9.8e-49 | 80.30 | senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa] >TYK25718... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3E355 | 6.6e-59 | 69.61 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3BNW0 | 1.7e-51 | 63.27 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A5A7T2X9 | 3.9e-51 | 66.85 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A5A7T9Z3 | 3.6e-49 | 63.10 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7SVW0 | 4.7e-49 | 80.30 | Senescence-specific cysteine protease sag39 OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |