MELO3C012916 (gene) Melon (DHL92) v4

Overview


Name	MELO3C012916
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Pectin lyase-like superfamily protein
Location	chr04: 14339650 .. 14342363 (+)
RNA-Seq Expression	MELO3C012916
Synteny	MELO3C012916

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCCATTTTATCCAAAAATAAAGAACATCATCCCCTTTTAATTTGTCAGCATCTTTCAGTTTATGGGCATTAATTACTTGTTGAGTCTTGTTCCCTTTCAAAATGTATAACTTTGGTCGTTTGATCTCTTCCTTTACCTTTTGTATTACATTCATAATCTTCTTCTTTTGCCTTCTGTTTCCTGTTAATGGCCGTTGGCATAACCATGCAAAGAAACACAAACAACATTCTCACCATCATTACCATTTCACCATTTCCCAACCTCCTTCTCCTTTTCCTTCTCCTTCCCCTTCCCCTTCTCCTTCCCCTTCCCCTTCGTCAGAACCGCAGAGTCCTCCGGAAGACGATGGAGGGCCGGCCTCGTCCATCAATTCCACTATCATTTTTGACGTACGTCATTTTGGCGCCATTGGAGATGGCACTGCAGACGACACGGCCGCGTTCAAGATGGCATGGGACACGGCATGTCAAAGGAATGACGACGACGACAACAACTATGGAGTTATTCTCGTTCCCTATGGCTTCTCCTTCATGATTCAGTCGACTATATTCACGGGACCGTGCAGAAACGGCATTGTGTTTCAAGTTGATGGCACTCTTATGGCTCCTGACGGGCCTGACGCTTGGCCGAAGGGTTATAGTGCTCACCAATGGTTGGTTTTTTATCGAGTTTATAACATGTCCCTTCAAGGAAATGGCCTTATTGATGGTCGAGGCCAGAAATGGTGGGATCTTCCTTGCAAACCTCACAAGGTAAGGGACAACAACGATCATACTTTTGCAGTACTATAAATTTTTTACTTCATTTCGGGGACGTTTTGAAAGCTAATTAACTCGAGGTTTGATTCCATTTTAAAGGGGAAAACAATGACAGGACCTTGTGACAGCCCAATTGTAAGTTGAAGTTTAGTTCTCTAAAATAAAATTGTTTTTTTCTTCTTAATTAAAGTTTAGAAATATATATGAAAAATTCAAGTGAAAAGAGTAAAAGTGTTTCTTTTTTCTGGCAGGCTATAAGATTTTTCATGAGCTCAAAGTTGAGAGTTGAAGGAGTTAGAATCAAAGACAGTCCTCAATTTCATTTTAGGTTTGACAATTGTAAAGATGTTTACATTGATTCTCTTCACATAACATCTCCTGCTTTGAGTCCAAACACCGATGGAATCCACATTGAGAATACAAATGGTGTTCAGATTTTCAATTCAATAGTTGCCAATGGTTAGTCCTCACACATATATAATATTGTTTCCTAATTATCTTTTCTTTGCATTTTAATTTCTAAAAATGACAGAATAATTATAGACTTCAATTTTAAAAGTAAAAACCACCCTAGAAATGAGTGGTTGATGTGTCACGGTTGGACAACGTTCTCGTTTCTAGTGTTTTATTACAAAAGTATGATTTTGTTTTTAAAATATATATAATATATTTTTAGACTCGAAACAAGAAACTATTTCTTTTCCTTTTAAAAAATTGTGTAAACTTTTGGTGTGTTTCAAAGCTAAAGAAAGAGACATCGATAAATATATATATTAAACTCATGACACGTTTATTAAGAATTAGAAACAAGAATTAAGAAACAAGAATAAAATGTTATGAAACGATACTTGAAGAAATTTGTTGGATTCGTTATAACATTCTTGTATTTTGGCTTCTCGTTTATCATTTTCTATTTTTGTTGCTTGGTTTCACTTTTAATAAAAAAACATAATTGTATTTGGTAACTAAATAGTTCCATTCAAAATGTAGTTTTATAAAGTTGAACATACCAAAACTTTTAAGTTATTGTTTTTATTTTTAAATATTTAATTATTAGTGATTTTATAATCATGAATGGTAAAAAAAATGTTTAATAATTCTTTTTTATGTTGGGAACGAACACAATTAAATATGTTTCTAAGTAGTTGAAAATAAGAAACTGAAAATGAAAAGCGTAAACATCACCGAAATAACTCCCAAATAGATTTCAAAAAGAACTTATGAAGCAAAACCTAACTATTTGGGTGATTTTTTTTTTTGCTCACAGGTGATGATTGCATTTCAATTGGATCAGGTTCTTATAACGTAGAAATAACAAACATTACATGTGGACCAGGTCATGGAATTAGGTAAACAAATTATGAAACGACCTTATTATATACTTTCTTCTAATTAATTCTTATATAACATGTAATTCCTTTTTATACTCATAACCTTAGTTCTTCATGTCAGCATTGGTAGCCTAGGAAATCACAACTCTCGAGCGTGCGTATCGAACATAACAGTTCGAGACTCAATAATCAAGGTCTCAGACAACGGTGTTCGAATCAAGACATGGCAGGGTGGATATGGAGCGGTAAGAGGAGTAAGTTTCAACAACATTAACATGGATAACGTTAGGAACCCTATAATAATTGACCAATTCTATTGCCTCAACAAAGGATGTCTCAATCAAACTTCAGCCGTGGTTGTATCAGATATAAGCTATATTGACATCAAAGGAACTTATGATATTAGAAGCCCACCAATGCATTTTGGTTGTAGTGATTCTATGCCTTGTATGAACCTAACACTTGCCAATATTGAGCTTTTTCCTTCCAAAGGTGACATTTTGTTGGACCCCTTTTGTTGGAATGCTTATGGGAATTTGCAAACCCTAACAATACCACCAATTTCTTGCTTGCTTGAAACCTCCTCAAGGTCTTTCTTGGAAAGTGAGAAGGATTATTGTTAA

mRNA sequence

AATCCATTTTATCCAAAAATAAAGAACATCATCCCCTTTTAATTTGTCAGCATCTTTCAGTTTATGGGCATTAATTACTTGTTGAGTCTTGTTCCCTTTCAAAATGTATAACTTTGGTCGTTTGATCTCTTCCTTTACCTTTTGTATTACATTCATAATCTTCTTCTTTTGCCTTCTGTTTCCTGTTAATGGCCGTTGGCATAACCATGCAAAGAAACACAAACAACATTCTCACCATCATTACCATTTCACCATTTCCCAACCTCCTTCTCCTTTTCCTTCTCCTTCCCCTTCCCCTTCTCCTTCCCCTTCCCCTTCGTCAGAACCGCAGAGTCCTCCGGAAGACGATGGAGGGCCGGCCTCGTCCATCAATTCCACTATCATTTTTGACGTACGTCATTTTGGCGCCATTGGAGATGGCACTGCAGACGACACGGCCGCGTTCAAGATGGCATGGGACACGGCATGTCAAAGGAATGACGACGACGACAACAACTATGGAGTTATTCTCGTTCCCTATGGCTTCTCCTTCATGATTCAGTCGACTATATTCACGGGACCGTGCAGAAACGGCATTGTGTTTCAAGTTGATGGCACTCTTATGGCTCCTGACGGGCCTGACGCTTGGCCGAAGGGTTATAGTGCTCACCAATGGTTGGTTTTTTATCGAGTTTATAACATGTCCCTTCAAGGAAATGGCCTTATTGATGGTCGAGGCCAGAAATGGTGGGATCTTCCTTGCAAACCTCACAAGGCTATAAGATTTTTCATGAGCTCAAAGTTGAGAGTTGAAGGAGTTAGAATCAAAGACAGTCCTCAATTTCATTTTAGGTTTGACAATTGTAAAGATGTTTACATTGATTCTCTTCACATAACATCTCCTGCTTTGAGTCCAAACACCGATGGAATCCACATTGAGAATACAAATGGTGTTCAGATTTTCAATTCAATAGTTGCCAATGGTGATGATTGCATTTCAATTGGATCAGGTTCTTATAACGTAGAAATAACAAACATTACATGTGGACCAGGTCATGGAATTAGCATTGGTAGCCTAGGAAATCACAACTCTCGAGCGTGCGTATCGAACATAACAGTTCGAGACTCAATAATCAAGGTCTCAGACAACGGTGTTCGAATCAAGACATGGCAGGGTGGATATGGAGCGGTAAGAGGAGTAAGTTTCAACAACATTAACATGGATAACGTTAGGAACCCTATAATAATTGACCAATTCTATTGCCTCAACAAAGGATGTCTCAATCAAACTTCAGCCGTGGTTGTATCAGATATAAGCTATATTGACATCAAAGGAACTTATGATATTAGAAGCCCACCAATGCATTTTGGTTGTAGTGATTCTATGCCTTGTATGAACCTAACACTTGCCAATATTGAGCTTTTTCCTTCCAAAGGTGACATTTTGTTGGACCCCTTTTGTTGGAATGCTTATGGGAATTTGCAAACCCTAACAATACCACCAATTTCTTGCTTGCTTGAAACCTCCTCAAGGTCTTTCTTGGAAAGTGAGAAGGATTATTGTTAA

Coding sequence (CDS)

ATGTATAACTTTGGTCGTTTGATCTCTTCCTTTACCTTTTGTATTACATTCATAATCTTCTTCTTTTGCCTTCTGTTTCCTGTTAATGGCCGTTGGCATAACCATGCAAAGAAACACAAACAACATTCTCACCATCATTACCATTTCACCATTTCCCAACCTCCTTCTCCTTTTCCTTCTCCTTCCCCTTCCCCTTCTCCTTCCCCTTCCCCTTCGTCAGAACCGCAGAGTCCTCCGGAAGACGATGGAGGGCCGGCCTCGTCCATCAATTCCACTATCATTTTTGACGTACGTCATTTTGGCGCCATTGGAGATGGCACTGCAGACGACACGGCCGCGTTCAAGATGGCATGGGACACGGCATGTCAAAGGAATGACGACGACGACAACAACTATGGAGTTATTCTCGTTCCCTATGGCTTCTCCTTCATGATTCAGTCGACTATATTCACGGGACCGTGCAGAAACGGCATTGTGTTTCAAGTTGATGGCACTCTTATGGCTCCTGACGGGCCTGACGCTTGGCCGAAGGGTTATAGTGCTCACCAATGGTTGGTTTTTTATCGAGTTTATAACATGTCCCTTCAAGGAAATGGCCTTATTGATGGTCGAGGCCAGAAATGGTGGGATCTTCCTTGCAAACCTCACAAGGCTATAAGATTTTTCATGAGCTCAAAGTTGAGAGTTGAAGGAGTTAGAATCAAAGACAGTCCTCAATTTCATTTTAGGTTTGACAATTGTAAAGATGTTTACATTGATTCTCTTCACATAACATCTCCTGCTTTGAGTCCAAACACCGATGGAATCCACATTGAGAATACAAATGGTGTTCAGATTTTCAATTCAATAGTTGCCAATGGTGATGATTGCATTTCAATTGGATCAGGTTCTTATAACGTAGAAATAACAAACATTACATGTGGACCAGGTCATGGAATTAGCATTGGTAGCCTAGGAAATCACAACTCTCGAGCGTGCGTATCGAACATAACAGTTCGAGACTCAATAATCAAGGTCTCAGACAACGGTGTTCGAATCAAGACATGGCAGGGTGGATATGGAGCGGTAAGAGGAGTAAGTTTCAACAACATTAACATGGATAACGTTAGGAACCCTATAATAATTGACCAATTCTATTGCCTCAACAAAGGATGTCTCAATCAAACTTCAGCCGTGGTTGTATCAGATATAAGCTATATTGACATCAAAGGAACTTATGATATTAGAAGCCCACCAATGCATTTTGGTTGTAGTGATTCTATGCCTTGTATGAACCTAACACTTGCCAATATTGAGCTTTTTCCTTCCAAAGGTGACATTTTGTTGGACCCCTTTTGTTGGAATGCTTATGGGAATTTGCAAACCCTAACAATACCACCAATTTCTTGCTTGCTTGAAACCTCCTCAAGGTCTTTCTTGGAAAGTGAGAAGGATTATTGTTAA

Protein sequence

MYNFGRLISSFTFCITFIIFFFCLLFPVNGRWHNHAKKHKQHSHHHYHFTISQPPSPFPSPSPSPSPSPSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDTACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYSAHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHKAIRFFMSSKLRVEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGDDCISIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQGGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDIRSPPMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLLETSSRSFLESEKDYC

Homology

[Close]

BLAST of MELO3C012916 vs. NCBI nr
Match: KAA0038107.1 (polygalacturonase [Cucumis melo var. makuwa])

HSP 1 Score: 997.7 bits (2578), Expect = 3.5e-287
Identity = 480/489 (98.16%), Postives = 480/489 (98.16%), Query Frame = 0


Query: 1   MYNFGRLISSFTFCITFIIFFFCLLFPVNGRWHNHAKKHKQHSHHHYHFTISQPPSPFPS 60
           MYNFGRLISSFTFCITFIIFFFCLLFPVNGRWHNHAKKHKQHSHHHYHFTISQPPSPFPS
Sbjct: 1   MYNFGRLISSFTFCITFIIFFFCLLFPVNGRWHNHAKKHKQHSHHHYHFTISQPPSPFPS 60

Query: 61  PSPSPSPSPSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDT 120
           PSPSPSPSPSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDT
Sbjct: 61  PSPSPSPSPSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDT 120

Query: 121 ACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYS 180
           ACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYS
Sbjct: 121 ACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYS 180

Query: 181 AHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHK---------AIRFFMSSKLRVEG 240
           AHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHK         AIRFFMSSKLRVEG
Sbjct: 181 AHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHKSKSVSFFWQAIRFFMSSKLRVEG 240

Query: 241 VRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGDDCI 300
           VRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGDDCI
Sbjct: 241 VRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGDDCI 300

Query: 301 SIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQG 360
           SIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQG
Sbjct: 301 SIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQG 360

Query: 361 GYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDIRSP 420
           GYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDIRSP
Sbjct: 361 GYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDIRSP 420

Query: 421 PMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLLETSSRS 480
           PMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLLETSSRS
Sbjct: 421 PMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLLETSSRS 480

[Close]

BLAST of MELO3C012916 vs. NCBI nr
Match: TYK20501.1 (polygalacturonase [Cucumis melo var. makuwa])

HSP 1 Score: 996.5 bits (2575), Expect = 7.9e-287
Identity = 480/492 (97.56%), Postives = 480/492 (97.56%), Query Frame = 0


Query: 1   MYNFGRLISSFTFCITFIIFFFCLLFPVNGRWHNHAKKHKQHSHHHYHFTISQPPSPFPS 60
           MYNFGRLISSFTFCITFIIFFFCLLFPVNGRWHNHAKKHKQHSHHHYHFTISQPPSPFPS
Sbjct: 1   MYNFGRLISSFTFCITFIIFFFCLLFPVNGRWHNHAKKHKQHSHHHYHFTISQPPSPFPS 60

Query: 61  PSPSPSPSPSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDT 120
           PSPSPSPSPSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDT
Sbjct: 61  PSPSPSPSPSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDT 120

Query: 121 ACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYS 180
           ACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYS
Sbjct: 121 ACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYS 180

Query: 181 AHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHK------------AIRFFMSSKLR 240
           AHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHK            AIRFFMSSKLR
Sbjct: 181 AHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHKGKTMTGPCDSPIAIRFFMSSKLR 240

Query: 241 VEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGD 300
           VEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGD
Sbjct: 241 VEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGD 300

Query: 301 DCISIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKT 360
           DCISIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKT
Sbjct: 301 DCISIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKT 360

Query: 361 WQGGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDI 420
           WQGGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDI
Sbjct: 361 WQGGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDI 420

Query: 421 RSPPMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLLETS 480
           RSPPMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLLETS
Sbjct: 421 RSPPMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLLETS 480

[Close]

BLAST of MELO3C012916 vs. NCBI nr
Match: XP_031737994.1 (polygalacturonase At1g48100 [Cucumis sativus] >KGN58717.2 hypothetical protein Csa_000831 [Cucumis sativus])

HSP 1 Score: 918.3 bits (2372), Expect = 2.7e-263
Identity = 448/495 (90.51%), Postives = 461/495 (93.13%), Query Frame = 0


Query: 1   MYNFGRLISSFTFCITFIIFFFCLLFPVNGRWHNHAKKHKQHSHHHYHFTISQPPSPFPS 60
           MYNFGRLISSF F +TFIIFFFCLLFPV+GRWHNHAKKHKQHSHHH HFTISQP      
Sbjct: 1   MYNFGRLISSFAFSMTFIIFFFCLLFPVHGRWHNHAKKHKQHSHHHDHFTISQP------ 60

Query: 61  PSPSPSPSPSPSSEPQ-SPPEDDGGP-ASSINSTIIFDVRHFGAIGDGTADDTAAFKMAW 120
                 PSPSPSSEP  SPPED+GGP +SSINST IFDVRHFGAIGDGTADDTAAFKMAW
Sbjct: 61  ------PSPSPSSEPAGSPPEDNGGPSSSSINSTSIFDVRHFGAIGDGTADDTAAFKMAW 120

Query: 121 DTACQRNDDDDN-NYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPK 180
           DTACQRNDDD+N +YGVILVPYGFSFMIQSTIFTGPC+NG+VFQVDGTLMAPDGPDAWPK
Sbjct: 121 DTACQRNDDDNNDDYGVILVPYGFSFMIQSTIFTGPCKNGVVFQVDGTLMAPDGPDAWPK 180

Query: 181 GYSAHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHK------------AIRFFMSS 240
           GYSAHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHK            AIRFFMSS
Sbjct: 181 GYSAHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHKGKTMTGPCDSPIAIRFFMSS 240

Query: 241 KLRVEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVA 300
           +LRVEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVA
Sbjct: 241 ELRVEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVA 300

Query: 301 NGDDCISIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVR 360
           NGDDC+SIGSGS+NVEI NITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVR
Sbjct: 301 NGDDCVSIGSGSFNVEIRNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVR 360

Query: 361 IKTWQGGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGT 420
           IKTWQGG+G VRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGT
Sbjct: 361 IKTWQGGFGTVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGT 420

Query: 421 YDIRSPPMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLL 480
           YDIRSPPMHFGCSDSMPCMNLTLANIELFPS+GDILLDPFCWNAYGNLQTLTIPPISCLL
Sbjct: 421 YDIRSPPMHFGCSDSMPCMNLTLANIELFPSRGDILLDPFCWNAYGNLQTLTIPPISCLL 480

[Close]

BLAST of MELO3C012916 vs. NCBI nr
Match: XP_038905655.1 (polygalacturonase At1g48100-like [Benincasa hispida])

HSP 1 Score: 862.1 bits (2226), Expect = 2.3e-246
Identity = 417/490 (85.10%), Postives = 437/490 (89.18%), Query Frame = 0


Query: 6   RLISSFTFCITFIIFFFCLLFPVNGRWHNHAKKHKQHSHHHYHFTISQPPSPFPSPSPSP 65
           R  SS  FCITFIIFFFCLLFPV+GRWHNHAKKHKQHSHHH HFTISQPPSP        
Sbjct: 4   RGFSSLAFCITFIIFFFCLLFPVHGRWHNHAKKHKQHSHHHNHFTISQPPSP-------- 63

Query: 66  SPSPSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDTACQRN 125
            P  SP      P +DD G +SSINST IFDVR+FGAIGDGTADDT AFKMAWDTACQR 
Sbjct: 64  -PPTSP------PDDDDNGGSSSINSTGIFDVRNFGAIGDGTADDTMAFKMAWDTACQR- 123

Query: 126 DDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYSAHQWL 185
           DDDD+NY VIL+PYGFSFMIQSTIFTGPC+NG+ FQV GTLMAPDGPDAWPK YSAHQWL
Sbjct: 124 DDDDDNYAVILIPYGFSFMIQSTIFTGPCKNGVEFQVGGTLMAPDGPDAWPKSYSAHQWL 183

Query: 186 VFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHK---------------AIRFFMSSKLRVE 245
           VFYRVYNMSL+GNGLIDGRGQKWWDLPCKPHK               AIRFFMSS L VE
Sbjct: 184 VFYRVYNMSLRGNGLIDGRGQKWWDLPCKPHKGVKGRTMSEPCDSPIAIRFFMSSNLTVE 243

Query: 246 GVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGDDC 305
           G+RIKDSPQFHFRFDNCKDV ID +HIT+PALSPNTDGIHIENTNGVQIFNS VANGDDC
Sbjct: 244 GLRIKDSPQFHFRFDNCKDVIIDGIHITAPALSPNTDGIHIENTNGVQIFNSEVANGDDC 303

Query: 306 ISIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQ 365
           ISIGSGSYNV+I NITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQ
Sbjct: 304 ISIGSGSYNVDIRNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQ 363

Query: 366 GGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDIRS 425
           GGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDI+Y+DIKGTYDIRS
Sbjct: 364 GGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDITYVDIKGTYDIRS 423

Query: 426 PPMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLLETSSR 481
           PPMHFGCSDSMPCMNLTLANIELFPSKG++LLDPFCWNAYGNLQTLTIPP++CLLE+SSR
Sbjct: 424 PPMHFGCSDSMPCMNLTLANIELFPSKGEVLLDPFCWNAYGNLQTLTIPPVACLLESSSR 477

[Close]

BLAST of MELO3C012916 vs. NCBI nr
Match: XP_016900401.1 (PREDICTED: polygalacturonase At1g48100, partial [Cucumis melo])

HSP 1 Score: 857.1 bits (2213), Expect = 7.5e-245
Identity = 418/448 (93.30%), Postives = 420/448 (93.75%), Query Frame = 0


Query: 45  HHYHFTISQPPSPFPSPSPSPSPSPSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIG 104
           HH+  + S     F    P P   PSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIG
Sbjct: 16  HHFPTSFS-----FSFSFPFPFSFPSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIG 75

Query: 105 DGTADDTAAFKMAWDTACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDG 164
           DGTADDTAAFKMAWDTACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDG
Sbjct: 76  DGTADDTAAFKMAWDTACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDG 135

Query: 165 TLMAPDGPDAWPKGYSAHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHK------- 224
           TLMAPDGPDAWPKGYSAHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHK       
Sbjct: 136 TLMAPDGPDAWPKGYSAHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHKGKTMTGP 195

Query: 225 -----AIRFFMSSKLRVEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIE 284
                AIRFFMSSKLRVEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIE
Sbjct: 196 CDSPIAIRFFMSSKLRVEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIE 255

Query: 285 NTNGVQIFNSIVANGDDCISIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITV 344
           NTNGVQIFNSIVANGDDCISIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITV
Sbjct: 256 NTNGVQIFNSIVANGDDCISIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITV 315

Query: 345 RDSIIKVSDNGVRIKTWQGGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAV 404
           RDSIIKVSDNGVRIKTWQGGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAV
Sbjct: 316 RDSIIKVSDNGVRIKTWQGGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAV 375

Query: 405 VVSDISYIDIKGTYDIRSPPMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGN 464
           VVSDISYIDIKGTYDIRSPPMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGN
Sbjct: 376 VVSDISYIDIKGTYDIRSPPMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGN 435

Query: 465 LQTLTIPPISCLLETSSRSFLESEKDYC 481
           LQTLTIPPISCLLETSSRSFLESEKDYC
Sbjct: 436 LQTLTIPPISCLLETSSRSFLESEKDYC 458

[Close]

BLAST of MELO3C012916 vs. ExPASy Swiss-Prot
Match: Q949Z1 (Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 2.8e-141
Identity = 240/443 (54.18%), Postives = 313/443 (70.65%), Query Frame = 0


Query: 43  SHHHYHFTISQPPSPFPSPSPSPSPSPSPSSE-PQSP-PEDDGGPASSINSTIIFDVRHF 102
           + +HYH        P P P P P  + +P  + P  P P  D  P  S +S  +FDV  F
Sbjct: 27  ARYHYHKGRHGVTHPLPPPPPPPLETANPPDQVPSDPYPSPDPAPGDS-DSGCVFDVTSF 86

Query: 103 GAIGDGTADDTAAFKMAWDTACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVF 162
           GA+GDG+ DDTAAF+ AW  AC          GV+L P G  F I STIF+GPC+ G+VF
Sbjct: 87  GAVGDGSCDDTAAFQDAWKAACAVES------GVVLAPEGGVFKITSTIFSGPCKPGLVF 146

Query: 163 QVDGTLMAPDGPDAWPKGYSAHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHKA-- 222
           Q+DG LM PDGP+ WP+  + +QWLVFYR+   +  G G ++G GQKWWDLPCKPH+   
Sbjct: 147 QLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWWDLPCKPHRGPD 206

Query: 223 -------------IRFFMSSKLRVEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPN 282
                        IRFFMS+ + V+G+RI++SPQFH +FD C+ V I+ + I+SP LSPN
Sbjct: 207 GSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPN 266

Query: 283 TDGIHIENTNGVQIFNSIVANGDDCISIGSGSYNVEITNITCGPGHGISIGSLGNHNSRA 342
           TDGIH+ NT  V I+NS+V+NGDDCISIG+G  +V+I  +TCGP HGISIGSLG HNS+A
Sbjct: 267 TDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLGVHNSQA 326

Query: 343 CVSNITVRDSIIKVSDNGVRIKTWQGGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGC 402
           CVSNITVR+++I+ SDNG+R+KTWQGG G+V  + F NI M+NV N II+DQ+YC +K C
Sbjct: 327 CVSNITVRNTVIRDSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYYCQSKDC 386

Query: 403 LNQTSAVVVSDISYIDIKGTYDIRSPPMHFGCSDSMPCMNLTLANIELFPSKGDILLDPF 462
            N+TSAV V D+ Y +IKGTYD+RSPP+HF CSD++ C N+T++ +EL P +G+++ DPF
Sbjct: 387 RNETSAVKVFDVEYRNIKGTYDVRSPPIHFACSDTVACTNITMSEVELLPEEGELVDDPF 446

Query: 463 CWNAYGNLQTLTIPPISCLLETS 469
           CWNAYG  +TLTIPPI CLL+ S
Sbjct: 447 CWNAYGKQETLTIPPIDCLLDGS 462

[Close]

BLAST of MELO3C012916 vs. ExPASy Swiss-Prot
Match: Q94AJ5 (Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g80170 PE=1 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 1.7e-90
Identity = 170/391 (43.48%), Postives = 233/391 (59.59%), Query Frame = 0


Query: 94  IFDVRHFGAIGDGTADDTAAFKMAWDTACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGP 153
           +  V +FGA G+G  DDT AF  AW TAC            ILVP  ++ +++    +GP
Sbjct: 52  LLHVGNFGAKGNGVTDDTKAFADAWKTACSSKVKTR-----ILVPENYTCLLRPIDLSGP 111

Query: 154 CRNGIVFQVDGTLMAPDGPDAWPKGYSAHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPC 213
           C+  +  Q+ GT++AP+ PD W +G +  +WL F+ +  ++++G G ++G GQ+WW+  C
Sbjct: 112 CKARLTLQISGTIIAPNDPDVW-EGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWWERSC 171

Query: 214 KPH---------KAIRFFMSSKLRVEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSP 273
           K +          A+ F     +RVE + + DS Q H    +C+ V I  L + +PA SP
Sbjct: 172 KHNHSNPCRGAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSP 231

Query: 274 NTDGIHIENTNGVQIFNSIVANGDDCISIGSGSYNVEITNITCGPGHGISIGSLGNHNSR 333
           NTDGIHI  + G+ I N+ V+ GDDCISI   S  + I+NI CGPGHGISIGSLG   S 
Sbjct: 232 NTDGIHISVSRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGKSKSW 291

Query: 334 ACVSNITVRDSIIKVSDNGVRIKTWQGGYGAVRGVSFNNINMDNVRNPIIIDQFYC-LNK 393
             V +ITV  +II  + NGVRIKTWQGG G V  + F NI M+NV NPIIIDQ+YC   K
Sbjct: 292 EEVRDITVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRK 351

Query: 394 GCLNQTSAVVVSDISYIDIKGTYDIRSPPMHFGCSDSMPCMNLTLANIELFPSKGDILLD 453
            C NQTSA+ + +IS++ ++GT       +   CSDS PC N+ L +I+L PS GD   +
Sbjct: 352 PCANQTSAISIENISFVHVRGT-SASKEAIKISCSDSSPCRNILLQDIDLEPSNGDGFTE 411

Query: 454 PFCWNAYGNLQTLTIPPISCLLETSSRSFLE 475
            FCW AYG+      PP  CL  +   SFLE
Sbjct: 412 SFCWEAYGSSSGQVYPP-PCL--SDDTSFLE 432

[Close]

BLAST of MELO3C012916 vs. ExPASy Swiss-Prot
Match: Q02096 (Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 7.1e-81
Identity = 159/366 (43.44%), Postives = 219/366 (59.84%), Query Frame = 0


Query: 83  GGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDTACQRNDDDDNNYGVILVPYGFS 142
           GGP +S ++ I  D   FGA GDGT DDT AF+ AW  AC       ++  V++VP   +
Sbjct: 75  GGPETSPDTDISVD--DFGARGDGT-DDTKAFEKAWKDAC-------SSGSVLIVPENKN 134

Query: 143 FMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYSAHQWLVFYRVYNMSLQGNGLID 202
           ++++   F+GPC++ +  ++ GT+ A      W  G++  +W+ F  + N++L+G G  +
Sbjct: 135 YLLKQITFSGPCKSDLRVKIRGTIEASSDQSDW-VGHNRKRWIEFEDISNLTLEGGGTSN 194

Query: 203 GRGQKWWDLPCKPHK---------AIRFFMSSKLRVEGVRIKDSPQFHFRFDNCKDVYID 262
           G G+ WWD  CK  K         A+ F     L V  + IKDS + H  FD C+DV   
Sbjct: 195 GNGETWWDSSCKRKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQDVIAS 254

Query: 263 SLHITSPALSPNTDGIHIENTNGVQIFNSIVANGDDCISIGSGSYNVEITNITCGPGHGI 322
           +L +T+P  SPNTDGIHI  T  + + NS++  GDDCISI SGS  V  TNITCGPGHGI
Sbjct: 255 NLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESGSKMVIATNITCGPGHGI 314

Query: 323 SIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQGGYGAVRGVSFNNINMDNVRNPI 382
           SIGSLG+ NS A VS + V    +  + NG+RIKTWQGG G+ + + F NI M NV NPI
Sbjct: 315 SIGSLGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTWQGGSGSAKNIKFQNIVMHNVTNPI 374

Query: 383 IIDQFYCLNKG-CLNQTSAVVVSDISYIDIKGTYDIRSPPMHFGCSDSMPCMNLTLANIE 439
           IIDQ+YC +K  C  Q SAV VS+++Y++I+GT       + F CS S PC    + NI 
Sbjct: 375 IIDQYYCDSKDPCPEQESAVKVSNVAYMNIRGT-SASEVAVKFDCSKSSPCQGYIVGNIN 428

[Close]

BLAST of MELO3C012916 vs. ExPASy Swiss-Prot
Match: Q8RY29 (Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2)

HSP 1 Score: 294.3 bits (752), Expect = 2.5e-78
Identity = 150/358 (41.90%), Postives = 212/358 (59.22%), Query Frame = 0


Query: 87  SSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDTACQRNDDDDNNYGVILVPYGFSFMIQ 146
           +S+ +     V  FGA GDG  DDT AF  AW  AC  N   +     +LVP G +++++
Sbjct: 60  ASLRTPTTVSVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVN-----LLVPKGNTYLLK 119

Query: 147 STIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYSAHQWLVFYRVYNMSLQG--NGLIDGR 206
           S   TGPC + +  Q+ GTL A      +       +W++F  V N+S+ G   G++DG 
Sbjct: 120 SIQLTGPCNSILTVQIFGTLSASQKRSDYK---DISKWIMFDGVNNLSVDGGDTGVVDGN 179

Query: 207 GQKWWDLPCKPHK---------AIRFFMSSKLRVEGVRIKDSPQFHFRFDNCKDVYIDSL 266
           G+ WW   CK +K         A+ F+ S  L V+ ++++++ Q     + C +V + ++
Sbjct: 180 GETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNV 239

Query: 267 HITSPALSPNTDGIHIENTNGVQIFNSIVANGDDCISIGSGSYNVEITNITCGPGHGISI 326
            +T+PA SPNTDGIHI NT  +++  SI+  GDDCISI SGS NV+I +ITCGPGHGISI
Sbjct: 240 VVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPGHGISI 299

Query: 327 GSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQGGYGAVRGVSFNNINMDNVRNPIII 386
           GSLG+ NS+A VS +TV  + +  +DNGVRIKT+QGG G    + F NI MDNV+NPIII
Sbjct: 300 GSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVKNPIII 359

Query: 387 DQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDIRSPPMHFGCSDSMPCMNLTLANIEL 434
           DQ YC    C  + SAV V ++ Y DI GT       + F CS + PC  + L  + +
Sbjct: 360 DQDYCDKSKCTTEKSAVQVKNVVYRDISGT-SASENAITFNCSKNYPCQGIVLDRVNI 408

[Close]

BLAST of MELO3C012916 vs. ExPASy Swiss-Prot
Match: P43212 (Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.6e-77
Identity = 157/400 (39.25%), Postives = 225/400 (56.25%), Query Frame = 0


Query: 94  IFDVRHFGAIGDGTADDTAAFKMAWDTACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGP 153
           IF+V  +GA+GDG  D T AF  AW  AC++         ++LVP    F++ +  F GP
Sbjct: 58  IFNVEKYGAVGDGKHDCTEAFSTAWQAACKKPS------AMLLVPGNKKFVVNNLFFNGP 117

Query: 154 CRNGIVFQVDGTLMAPDGPDAWPKGYSAHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPC 213
           C+    F+VDG + A   P +W        WL F ++   +L G G+IDG+G++WW   C
Sbjct: 118 CQPHFTFKVDGIIAAYQNPASWKNN---RIWLQFAKLTGFTLMGKGVIDGQGKQWWAGQC 177

Query: 214 K------------PHKAIRFFMSSKLRVEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPA 273
           K               AI+F  S+ L ++G+++ +SP+FH  F NC+ V I  + IT+P 
Sbjct: 178 KWVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPR 237

Query: 274 LSPNTDGIHIENTNGVQIFNSIVANGDDCISIGSGSYNVEITNITCGPGHGISIGSLGNH 333
            SPNTDGI I  +    +  + +  GDDC++IG+GS N+ I ++ CGPGHGISIGSLG  
Sbjct: 238 DSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRE 297

Query: 334 NSRACVSNITVRDSIIKVSDNGVRIKTWQGGYGAVRGVSFNNINMDNVRNPIIIDQFYCL 393
           NSRA VS + V  +    + NG+RIKTWQGG G    + + N+ M N  NPI+I+QFYC 
Sbjct: 298 NSRAEVSYVHVNGAKFIDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCT 357

Query: 394 N-KGCLNQTSAVVVSDISYIDIKGTYDIRSPPMHFGCSDSMPCMNLTLANIELFPSKGDI 453
           +   C NQ SAV + D++Y +I+GT    +  +   CSDSMPC ++ L++I L  + G I
Sbjct: 358 SASACQNQRSAVQIQDVTYKNIRGT-SATAAAIQLKCSDSMPCKDIKLSDISLKLTSGKI 417

Query: 454 ---LLDPFCWNAYGNLQTLTIPPISCLLETSSRSFLESEK 478
              L D    NA G      IP    L  ++ R   +S K
Sbjct: 418 ASCLND----NANGYFSGHVIPACKNLSPSAKRKESKSHK 443

[Close]

BLAST of MELO3C012916 vs. ExPASy TrEMBL
Match: A0A5A7T924 (Polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G003270 PE=3 SV=1)

HSP 1 Score: 997.7 bits (2578), Expect = 1.7e-287
Identity = 480/489 (98.16%), Postives = 480/489 (98.16%), Query Frame = 0


Query: 1   MYNFGRLISSFTFCITFIIFFFCLLFPVNGRWHNHAKKHKQHSHHHYHFTISQPPSPFPS 60
           MYNFGRLISSFTFCITFIIFFFCLLFPVNGRWHNHAKKHKQHSHHHYHFTISQPPSPFPS
Sbjct: 1   MYNFGRLISSFTFCITFIIFFFCLLFPVNGRWHNHAKKHKQHSHHHYHFTISQPPSPFPS 60

Query: 61  PSPSPSPSPSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDT 120
           PSPSPSPSPSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDT
Sbjct: 61  PSPSPSPSPSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDT 120

Query: 121 ACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYS 180
           ACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYS
Sbjct: 121 ACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYS 180

Query: 181 AHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHK---------AIRFFMSSKLRVEG 240
           AHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHK         AIRFFMSSKLRVEG
Sbjct: 181 AHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHKSKSVSFFWQAIRFFMSSKLRVEG 240

Query: 241 VRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGDDCI 300
           VRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGDDCI
Sbjct: 241 VRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGDDCI 300

Query: 301 SIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQG 360
           SIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQG
Sbjct: 301 SIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQG 360

Query: 361 GYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDIRSP 420
           GYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDIRSP
Sbjct: 361 GYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDIRSP 420

Query: 421 PMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLLETSSRS 480
           PMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLLETSSRS
Sbjct: 421 PMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLLETSSRS 480

[Close]

BLAST of MELO3C012916 vs. ExPASy TrEMBL
Match: A0A5D3DA93 (Polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00750 PE=3 SV=1)

HSP 1 Score: 996.5 bits (2575), Expect = 3.8e-287
Identity = 480/492 (97.56%), Postives = 480/492 (97.56%), Query Frame = 0


Query: 1   MYNFGRLISSFTFCITFIIFFFCLLFPVNGRWHNHAKKHKQHSHHHYHFTISQPPSPFPS 60
           MYNFGRLISSFTFCITFIIFFFCLLFPVNGRWHNHAKKHKQHSHHHYHFTISQPPSPFPS
Sbjct: 1   MYNFGRLISSFTFCITFIIFFFCLLFPVNGRWHNHAKKHKQHSHHHYHFTISQPPSPFPS 60

Query: 61  PSPSPSPSPSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDT 120
           PSPSPSPSPSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDT
Sbjct: 61  PSPSPSPSPSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDT 120

Query: 121 ACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYS 180
           ACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYS
Sbjct: 121 ACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYS 180

Query: 181 AHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHK------------AIRFFMSSKLR 240
           AHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHK            AIRFFMSSKLR
Sbjct: 181 AHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHKGKTMTGPCDSPIAIRFFMSSKLR 240

Query: 241 VEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGD 300
           VEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGD
Sbjct: 241 VEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGD 300

Query: 301 DCISIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKT 360
           DCISIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKT
Sbjct: 301 DCISIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKT 360

Query: 361 WQGGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDI 420
           WQGGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDI
Sbjct: 361 WQGGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDI 420

Query: 421 RSPPMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLLETS 480
           RSPPMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLLETS
Sbjct: 421 RSPPMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLLETS 480

[Close]

BLAST of MELO3C012916 vs. ExPASy TrEMBL
Match: A0A0A0LEQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G664600 PE=3 SV=1)

HSP 1 Score: 896.0 bits (2314), Expect = 7.0e-257
Identity = 436/481 (90.64%), Postives = 449/481 (93.35%), Query Frame = 0


Query: 15  ITFIIFFFCLLFPVNGRWHNHAKKHKQHSHHHYHFTISQPPSPFPSPSPSPSPSPSPSSE 74
           +TFIIFFFCLLFPV+GRWHNHAKKHKQHSHHH HFTISQP            PSPSPSSE
Sbjct: 1   MTFIIFFFCLLFPVHGRWHNHAKKHKQHSHHHDHFTISQP------------PSPSPSSE 60

Query: 75  PQ-SPPEDDGGP-ASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDTACQRNDDDDN-N 134
           P  SPPED+GGP +SSINST IFDVRHFGAIGDGTADDTAAFKMAWDTACQRNDDD+N +
Sbjct: 61  PAGSPPEDNGGPSSSSINSTSIFDVRHFGAIGDGTADDTAAFKMAWDTACQRNDDDNNDD 120

Query: 135 YGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYSAHQWLVFYRVY 194
           YGVILVPYGFSFMIQSTIFTGPC+NG+VFQVDGTLMAPDGPDAWPKGYSAHQWLVFYRVY
Sbjct: 121 YGVILVPYGFSFMIQSTIFTGPCKNGVVFQVDGTLMAPDGPDAWPKGYSAHQWLVFYRVY 180

Query: 195 NMSLQGNGLIDGRGQKWWDLPCKPHK------------AIRFFMSSKLRVEGVRIKDSPQ 254
           NMSLQGNGLIDGRGQKWWDLPCKPHK            AIRFFMSS+LRVEGVRIKDSPQ
Sbjct: 181 NMSLQGNGLIDGRGQKWWDLPCKPHKGKTMTGPCDSPIAIRFFMSSELRVEGVRIKDSPQ 240

Query: 255 FHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGDDCISIGSGSYN 314
           FHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGDDC+SIGSGS+N
Sbjct: 241 FHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGDDCVSIGSGSFN 300

Query: 315 VEITNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQGGYGAVRGV 374
           VEI NITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQGG+G VRGV
Sbjct: 301 VEIRNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQGGFGTVRGV 360

Query: 375 SFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDIRSPPMHFGCSD 434
           SFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDIRSPPMHFGCSD
Sbjct: 361 SFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDIRSPPMHFGCSD 420

Query: 435 SMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLLETSSRSFLESEKDY 481
           SMPCMNLTLANIELFPS+GDILLDPFCWNAYGNLQTLTIPPISCLLETSSRSFLESEKDY
Sbjct: 421 SMPCMNLTLANIELFPSRGDILLDPFCWNAYGNLQTLTIPPISCLLETSSRSFLESEKDY 469

[Close]

BLAST of MELO3C012916 vs. ExPASy TrEMBL
Match: A0A1S4DWP4 (polygalacturonase At1g48100 OS=Cucumis melo OX=3656 GN=LOC103490076 PE=3 SV=1)

HSP 1 Score: 857.1 bits (2213), Expect = 3.6e-245
Identity = 418/448 (93.30%), Postives = 420/448 (93.75%), Query Frame = 0


Query: 45  HHYHFTISQPPSPFPSPSPSPSPSPSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIG 104
           HH+  + S     F    P P   PSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIG
Sbjct: 16  HHFPTSFS-----FSFSFPFPFSFPSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIG 75

Query: 105 DGTADDTAAFKMAWDTACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDG 164
           DGTADDTAAFKMAWDTACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDG
Sbjct: 76  DGTADDTAAFKMAWDTACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDG 135

Query: 165 TLMAPDGPDAWPKGYSAHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHK------- 224
           TLMAPDGPDAWPKGYSAHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHK       
Sbjct: 136 TLMAPDGPDAWPKGYSAHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHKGKTMTGP 195

Query: 225 -----AIRFFMSSKLRVEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIE 284
                AIRFFMSSKLRVEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIE
Sbjct: 196 CDSPIAIRFFMSSKLRVEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIE 255

Query: 285 NTNGVQIFNSIVANGDDCISIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITV 344
           NTNGVQIFNSIVANGDDCISIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITV
Sbjct: 256 NTNGVQIFNSIVANGDDCISIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITV 315

Query: 345 RDSIIKVSDNGVRIKTWQGGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAV 404
           RDSIIKVSDNGVRIKTWQGGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAV
Sbjct: 316 RDSIIKVSDNGVRIKTWQGGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAV 375

Query: 405 VVSDISYIDIKGTYDIRSPPMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGN 464
           VVSDISYIDIKGTYDIRSPPMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGN
Sbjct: 376 VVSDISYIDIKGTYDIRSPPMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGN 435

Query: 465 LQTLTIPPISCLLETSSRSFLESEKDYC 481
           LQTLTIPPISCLLETSSRSFLESEKDYC
Sbjct: 436 LQTLTIPPISCLLETSSRSFLESEKDYC 458

[Close]

BLAST of MELO3C012916 vs. ExPASy TrEMBL
Match: A0A6J1FAK7 (polygalacturonase At1g48100-like OS=Cucurbita moschata OX=3662 GN=LOC111442323 PE=3 SV=1)

HSP 1 Score: 817.4 bits (2110), Expect = 3.2e-233
Identity = 399/486 (82.10%), Postives = 427/486 (87.86%), Query Frame = 0


Query: 10  SFTFCITFIIFFFCLLFPVNGRWHNHAKKHKQHSHHHYHFTISQPPSPFPSPSPSPSPSP 69
           SF  CIT IIFF    FPV+GRWHNHAK HK HSHHH HFTISQPPSP PSPSP  SPSP
Sbjct: 7   SFALCITLIIFF----FPVHGRWHNHAKNHK-HSHHHPHFTISQPPSPSPSPSPPLSPSP 66

Query: 70  SPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDTACQRNDDDD 129
               EP +PP+D+ G  SS N+T  FDVRH+GAIGDGT DDT AFKMAWDTACQ ++DD 
Sbjct: 67  ----EPANPPDDNDG-GSSFNATGFFDVRHYGAIGDGTTDDTEAFKMAWDTACQSDNDD- 126

Query: 130 NNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYSAHQWLVFYR 189
             Y VILVPYGFSFMIQSTIFTGPC++GIVFQVDGT +APDGPDAWPK YSAHQWLVFYR
Sbjct: 127 --YAVILVPYGFSFMIQSTIFTGPCKHGIVFQVDGTFIAPDGPDAWPKSYSAHQWLVFYR 186

Query: 190 VYNMSLQGNGLIDGRGQKWWDLPCKPHK---------------AIRFFMSSKLRVEGVRI 249
           V NMSL+GNG+IDGRGQKWWDLPCKPH+               AIRFFMSS L VEG+RI
Sbjct: 187 VNNMSLRGNGVIDGRGQKWWDLPCKPHRGGKGRTKAGPCDSPIAIRFFMSSNLTVEGLRI 246

Query: 250 KDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGDDCISIG 309
           KDSPQFHFRFDNC+DVYIDSL IT+PA SPNTDGIHIENTNGVQI NS+VANGDDCISIG
Sbjct: 247 KDSPQFHFRFDNCRDVYIDSLTITAPAWSPNTDGIHIENTNGVQILNSVVANGDDCISIG 306

Query: 310 SGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQGGYG 369
           SGSYNV+I NITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQGG+G
Sbjct: 307 SGSYNVDIRNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQGGFG 366

Query: 370 AVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDIRSPPMH 429
           AVRGVSFNNI+MDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKG+YDIRSPPMH
Sbjct: 367 AVRGVSFNNIHMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGSYDIRSPPMH 426

Query: 430 FGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLLETSSRSFLE 481
           FGCSDSMPC+NLTLANIELFPSKGDI LDPFCWNAYG+LQTLTIPP+ CLLE SSRS LE
Sbjct: 427 FGCSDSMPCVNLTLANIELFPSKGDIFLDPFCWNAYGDLQTLTIPPLGCLLEASSRSILE 479

[Close]

BLAST of MELO3C012916 vs. TAIR 10
Match: AT1G02460.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 613.6 bits (1581), Expect = 1.3e-175
Identity = 296/481 (61.54%), Postives = 368/481 (76.51%), Query Frame = 0


Query: 17  FIIFFFCLLFPVNGRWHNHAKKHKQHSHHHYHFTISQPPSPFPSPSPSPSPSPSPSSEPQ 76
           F+     L+     R H+H +KHK H++H++H +  +PPS   S  P+P P P  S  P 
Sbjct: 14  FMTLILTLMSLSEARNHHHKEKHK-HNNHNHHSSKPKPPSSSISQPPTPPPGPPDSPAPS 73

Query: 77  SPPEDDGGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDTACQRNDDDDNNYGVIL 136
            PP     PA   N   I++VR +GA+GDG  DDT AFK AWD++C   ++++N   V+L
Sbjct: 74  LPPSPSDDPADDNNG--IYNVRKYGAVGDGETDDTEAFKTAWDSSC---NNENNTDSVLL 133

Query: 137 VPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYSAHQWLVFYRVYNMSLQ 196
           VPYG++FMIQSTIFTGPCR+   FQVDGT++ PDGP++WP   S  QWLVFYRV  M+L+
Sbjct: 134 VPYGYTFMIQSTIFTGPCRSYQFFQVDGTIVTPDGPESWPSNISKRQWLVFYRVNGMALK 193

Query: 197 GNGLIDGRGQKWWDLPCKPHK----------------AIRFFMSSKLRVEGVRIKDSPQF 256
           G G+IDGRGQKWWDLPCKPH+                A+RFFMSS LRVEG++IK+SPQF
Sbjct: 194 GEGVIDGRGQKWWDLPCKPHRSVNKSAIVTGPCDSPIALRFFMSSNLRVEGLQIKNSPQF 253

Query: 257 HFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGDDCISIGSGSYNV 316
           HFRFD C+ V+++SLHIT+P LSPNTDGIHIEN+N V I+NSI++NGDDC+SIGSGSY+V
Sbjct: 254 HFRFDGCQGVHVESLHITAPPLSPNTDGIHIENSNSVTIYNSIISNGDDCVSIGSGSYDV 313

Query: 317 EITNITCGP-GHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQGGYGAVRGV 376
           +I N+TCGP GHGISIGSLGNHNSRACVSNITVRDS+IK SDNGVRIKTWQGG G+V GV
Sbjct: 314 DIRNLTCGPGGHGISIGSLGNHNSRACVSNITVRDSVIKYSDNGVRIKTWQGGSGSVSGV 373

Query: 377 SFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDIRSPPMHFGCSD 436
           +FNNI++D+VRNPIIIDQ+YC+ K C N+TSAV VSDI+Y  IKGTYDIRSPPMHFGCSD
Sbjct: 374 TFNNIHVDSVRNPIIIDQYYCMTKDCANKTSAVFVSDIAYQGIKGTYDIRSPPMHFGCSD 433

Query: 437 SMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLLETSSRSFLESEKDY 481
           ++PC NLTL++IEL P+KG+I+LDPFCWNAYG  + L+IPP+ CL+    +    S  D 
Sbjct: 434 AVPCTNLTLSDIELLPAKGEIVLDPFCWNAYGIAEELSIPPVWCLMSDPPKGLQGSLVDK 488

[Close]

BLAST of MELO3C012916 vs. TAIR 10
Match: AT4G01890.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 541.6 bits (1394), Expect = 6.5e-154
Identity = 271/487 (55.65%), Postives = 336/487 (68.99%), Query Frame = 0


Query: 14  CIT---FIIFFFCLLFPVNGRWHNHAKKHKQHSHHHYHFTISQPPSPFPSPSPSPSPSPS 73
           CIT    II F  L +    R H+ A               SQPPSP P+P+  PS SPS
Sbjct: 11  CITTLILIITFSLLSYGTEARLHHQA---------------SQPPSPSPNPN-DPSKSPS 70

Query: 74  PSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDTACQRNDDDDN 133
            S +              ++  +++DVR +GA+G+G ADDT +FK AWD+AC  N   +N
Sbjct: 71  RSQD--------------LDHEVVYDVRKYGAVGNGVADDTVSFKTAWDSACSNN--KNN 130

Query: 134 NYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYSAHQWLVFYRV 193
              V+ VPYGF+FMI+STIFTGPCR+   FQVDGT++  DGP +WP   +  QWL FYR+
Sbjct: 131 TASVLHVPYGFTFMIRSTIFTGPCRSYQYFQVDGTIVPRDGPKSWPSSLNKRQWLAFYRI 190

Query: 194 YNMSLQGNGLIDGRGQKWWDLPCKPHK----------------AIRFFMSSKLRVEGVRI 253
             M+LQG G+IDGRGQ WWDLPCKPH+                A+RFFMSS + V+G+ I
Sbjct: 191 NGMALQGAGVIDGRGQNWWDLPCKPHQQNVNKTKLAGPCESPAALRFFMSSNVIVKGLSI 250

Query: 254 KDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVANGDDCISIG 313
           K+SPQ H + D C  V+I+SL I SP  SPNTDGIHIEN+N V+I+NS+++NGDDC+SIG
Sbjct: 251 KNSPQVHLKLDGCHVVHINSLRIISPPASPNTDGIHIENSNSVEIYNSVISNGDDCVSIG 310

Query: 314 SGSYNVEITNITCGP-GHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQGGY 373
            G+Y+++I NITCGP GHGISIGSLG  NS ACVSN+TVRDS IK S+NGVRIKTWQGG 
Sbjct: 311 PGAYDIDIRNITCGPGGHGISIGSLGEKNSHACVSNVTVRDSFIKFSENGVRIKTWQGGS 370

Query: 374 GAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDIRSPPM 433
           G+V GV+F+NI++D VRNPIIIDQ+YC  K C N+TSAV V+DI Y  IKGTYDIRSPPM
Sbjct: 371 GSVSGVTFDNIHVDTVRNPIIIDQYYCTTKSCANKTSAVFVNDIVYQSIKGTYDIRSPPM 430

Query: 434 HFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLLETSSRSFL 481
           HFGCS+++PC NLTL+NIEL PSK DI++ PFCWNAYG     ++P ISCL    S S L
Sbjct: 431 HFGCSNNVPCTNLTLSNIELLPSKEDIVVGPFCWNAYGITDEFSVPLISCLKSNPSTSLL 465

[Close]

BLAST of MELO3C012916 vs. TAIR 10
Match: AT1G56710.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 510.8 bits (1314), Expect = 1.2e-144
Identity = 241/420 (57.38%), Postives = 307/420 (73.10%), Query Frame = 0


Query: 62  SPSPSPSPSPSSEPQSPPEDDGGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDTA 121
           SPSP+P+P+ +      P              +FDV  FGAIGD + DDT+AFKMAWD A
Sbjct: 28  SPSPAPNPAYNDNDNIAP-------------TVFDVTSFGAIGDCSTDDTSAFKMAWDAA 87

Query: 122 CQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVFQVDGTLMAPDGPDAWPKGYSA 181
           C           ++LVPY F F+++ T F GPCR  +V Q+DG +++PDGP +WP  Y  
Sbjct: 88  CMSTGPKS---ALLLVPYTFCFLVKPTTFNGPCRTNLVLQIDGFIVSPDGPRSWPSNYQ- 147

Query: 182 HQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHK---------------AIRFFMSSK 241
            QW++FYRV  +S+QG+G+I+GRGQKWW+LPCKPHK               AIR F SSK
Sbjct: 148 RQWMMFYRVNGLSIQGSGVINGRGQKWWNLPCKPHKGLNGTTQTGPCDSPVAIRLFQSSK 207

Query: 242 LRVEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNGVQIFNSIVAN 301
           +R++G+   +S QFH RFDNC DV +DS+ I +PA SPNTDGIHIENT+ VQI NS+++N
Sbjct: 208 VRIQGINFMNSAQFHVRFDNCSDVVVDSVIIKAPASSPNTDGIHIENTHNVQIRNSMISN 267

Query: 302 GDDCISIGSGSYNVEITNITCGPGHGISIGSLGNHNSRACVSNITVRDSIIKVSDNGVRI 361
           GDDCISIG+G +NV+I N+TCGP HGISIGSLG HNS+A VSNITV +S I  SDNGVRI
Sbjct: 268 GDDCISIGAGCFNVDIKNVTCGPSHGISIGSLGVHNSQAYVSNITVTNSTIWNSDNGVRI 327

Query: 362 KTWQGGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGCLNQTSAVVVSDISYIDIKGTY 421
           KTWQGG G+V  + F+NI M NVRNPI+IDQ+YC    C NQTSAV++SD+ Y +IKGTY
Sbjct: 328 KTWQGGSGSVSRIVFSNILMVNVRNPIMIDQYYCQTNNCANQTSAVIISDVLYANIKGTY 387

Query: 422 DIRSPPMHFGCSDSMPCMNLTLANIELFPSKGDILLDPFCWNAYGNLQTLTIPPISCLLE 467
           D+RSPP+HFGCSDS+PC NLTL  ++LFPSKG  L +PFCWNAYG+++ +T+PP+ CLL+
Sbjct: 388 DLRSPPIHFGCSDSVPCTNLTLTEVDLFPSKGQHLENPFCWNAYGSMK-ITVPPVYCLLD 429

[Close]

BLAST of MELO3C012916 vs. TAIR 10
Match: AT1G48100.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 503.4 bits (1295), Expect = 2.0e-142
Identity = 240/443 (54.18%), Postives = 313/443 (70.65%), Query Frame = 0


Query: 43  SHHHYHFTISQPPSPFPSPSPSPSPSPSPSSE-PQSP-PEDDGGPASSINSTIIFDVRHF 102
           + +HYH        P P P P P  + +P  + P  P P  D  P  S +S  +FDV  F
Sbjct: 27  ARYHYHKGRHGVTHPLPPPPPPPLETANPPDQVPSDPYPSPDPAPGDS-DSGCVFDVTSF 86

Query: 103 GAIGDGTADDTAAFKMAWDTACQRNDDDDNNYGVILVPYGFSFMIQSTIFTGPCRNGIVF 162
           GA+GDG+ DDTAAF+ AW  AC          GV+L P G  F I STIF+GPC+ G+VF
Sbjct: 87  GAVGDGSCDDTAAFQDAWKAACAVES------GVVLAPEGGVFKITSTIFSGPCKPGLVF 146

Query: 163 QVDGTLMAPDGPDAWPKGYSAHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPCKPHKA-- 222
           Q+DG LM PDGP+ WP+  + +QWLVFYR+   +  G G ++G GQKWWDLPCKPH+   
Sbjct: 147 QLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWWDLPCKPHRGPD 206

Query: 223 -------------IRFFMSSKLRVEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPN 282
                        IRFFMS+ + V+G+RI++SPQFH +FD C+ V I+ + I+SP LSPN
Sbjct: 207 GSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPN 266

Query: 283 TDGIHIENTNGVQIFNSIVANGDDCISIGSGSYNVEITNITCGPGHGISIGSLGNHNSRA 342
           TDGIH+ NT  V I+NS+V+NGDDCISIG+G  +V+I  +TCGP HGISIGSLG HNS+A
Sbjct: 267 TDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLGVHNSQA 326

Query: 343 CVSNITVRDSIIKVSDNGVRIKTWQGGYGAVRGVSFNNINMDNVRNPIIIDQFYCLNKGC 402
           CVSNITVR+++I+ SDNG+R+KTWQGG G+V  + F NI M+NV N II+DQ+YC +K C
Sbjct: 327 CVSNITVRNTVIRDSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYYCQSKDC 386

Query: 403 LNQTSAVVVSDISYIDIKGTYDIRSPPMHFGCSDSMPCMNLTLANIELFPSKGDILLDPF 462
            N+TSAV V D+ Y +IKGTYD+RSPP+HF CSD++ C N+T++ +EL P +G+++ DPF
Sbjct: 387 RNETSAVKVFDVEYRNIKGTYDVRSPPIHFACSDTVACTNITMSEVELLPEEGELVDDPF 446

Query: 463 CWNAYGNLQTLTIPPISCLLETS 469
           CWNAYG  +TLTIPPI CLL+ S
Sbjct: 447 CWNAYGKQETLTIPPIDCLLDGS 462

[Close]

BLAST of MELO3C012916 vs. TAIR 10
Match: AT5G14650.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 380.2 bits (975), Expect = 2.5e-105
Identity = 192/408 (47.06%), Postives = 260/408 (63.73%), Query Frame = 0


Query: 82  DGGPASSINSTIIFDVRHFGAIGDGTADDTAAFKMAWDTACQRNDDDDNNYGVILVPYGF 141
           +GG + +IN      V   GA GDGT+DDT AF+ AW  AC+           +LVP G 
Sbjct: 44  EGGSSGTIN------VLDHGAKGDGTSDDTKAFEDAWQVACK------VAASTLLVPSGS 103

Query: 142 SFMIQSTIFTG-PCRNGIVFQVDGTLMAPDGPDAWPKGYSAHQWLVFYRVYNMSLQGNGL 201
           +F++    F G  C+  IVFQ++G ++AP    AW  G    QW+ F  +  ++++G G+
Sbjct: 104 TFLVGPVSFLGKECKEKIVFQLEGKIIAPTSASAWGSGLL--QWIEFKALQGITIKGKGI 163

Query: 202 IDGRGQKWWD------LPCKPHKAIRFFMSSKLRVEGVRIKDSPQFHFRFDNCKDVYIDS 261
           IDGRG  WW+      +P     A+RF+ S+ + V G+ I++SPQ H +FDNC  + +  
Sbjct: 164 IDGRGSVWWNDMMGTKMPRTKPTALRFYGSNGVTVSGITIQNSPQTHLKFDNCISIQVSD 223

Query: 262 LHITSPALSPNTDGIHIENTNGVQIFNSIVANGDDCISIGSGSYNVEITNITCGPGHGIS 321
              +SP  SPNTDGIH++N+    I+ S +A GDDCISI +G  N+ I ++ CGPGHGIS
Sbjct: 224 FTTSSPGDSPNTDGIHLQNSQDAVIYRSTLACGDDCISIQTGCSNINIHDVDCGPGHGIS 283

Query: 322 IGSLGNHNSRACVSNITVRDSIIKVSDNGVRIKTWQGGYGAVRGVSFNNINMDNVRNPII 381
           IG LG  N++ACVSNITVRD  +  + NGVRIK+WQGG G+V+ V F+NI + NV NPII
Sbjct: 284 IGGLGKDNTKACVSNITVRDVTMHETTNGVRIKSWQGGSGSVKQVMFSNIQVSNVANPII 343

Query: 382 IDQFYCLNKGCLNQTSAVVVSDISYIDIKGTYDIRSPPMHFGCSDSMPCMNLTLANIELF 441
           IDQ+YC   GC N+TSAV VS+I+YI+IKGTY     P+ F CSDS+PC  ++L+ IEL 
Sbjct: 344 IDQYYCDGGGCHNETSAVAVSNINYINIKGTY--TKEPVRFACSDSLPCTGISLSTIELK 403

Query: 442 PSKGDI-LLDPFCWNAYGNLQTLTIPPISCL-LETSSRSFLESEKDYC 481
           P+ G    LDPFCW A+G L+T T+PPI CL  E S  +   S  D C
Sbjct: 404 PATGKASSLDPFCWKAHGELKTKTLPPIQCLKTEKSPEAASRSNNDAC 435

The following BLAST results are available for this feature:

BLAST of MELO3C012916 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038107.1	3.5e-287	98.16	polygalacturonase [Cucumis melo var. makuwa]	[more]
TYK20501.1	7.9e-287	97.56	polygalacturonase [Cucumis melo var. makuwa]	[more]
XP_031737994.1	2.7e-263	90.51	polygalacturonase At1g48100 [Cucumis sativus] >KGN58717.2 hypothetical protein C...	[more]
XP_038905655.1	2.3e-246	85.10	polygalacturonase At1g48100-like [Benincasa hispida]	[more]
XP_016900401.1	7.5e-245	93.30	PREDICTED: polygalacturonase At1g48100, partial [Cucumis melo]	[more]

BLAST of MELO3C012916 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q949Z1	2.8e-141	54.18	Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV...	[more]
Q94AJ5	1.7e-90	43.48	Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g8017...	[more]
Q02096	7.1e-81	43.44	Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1	[more]
Q8RY29	2.5e-78	41.90	Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2	[more]
P43212	1.6e-77	39.25	Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1	[more]

BLAST of MELO3C012916 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T924	1.7e-287	98.16	Polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G003...	[more]
A0A5D3DA93	3.8e-287	97.56	Polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00...	[more]
A0A0A0LEQ6	7.0e-257	90.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G664600 PE=3 SV=1	[more]
A0A1S4DWP4	3.6e-245	93.30	polygalacturonase At1g48100 OS=Cucumis melo OX=3656 GN=LOC103490076 PE=3 SV=1	[more]
A0A6J1FAK7	3.2e-233	82.10	polygalacturonase At1g48100-like OS=Cucurbita moschata OX=3662 GN=LOC111442323 P...	[more]

BLAST of MELO3C012916 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02460.1	1.3e-175	61.54	Pectin lyase-like superfamily protein	[more]
AT4G01890.1	6.5e-154	55.65	Pectin lyase-like superfamily protein	[more]
AT1G56710.1	1.2e-144	57.38	Pectin lyase-like superfamily protein	[more]
AT1G48100.1	2.0e-142	54.18	Pectin lyase-like superfamily protein	[more]
AT5G14650.1	2.5e-105	47.06	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 327..348 e-value: 20.0 score: 14.1 coord: 247..273 e-value: 550.0 score: 9.0 coord: 274..295 e-value: 940.0 score: 7.4 coord: 297..317 e-value: 2800.0 score: 4.0 coord: 356..377 e-value: 4200.0 score: 2.8
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 135..434 e-value: 9.6E-88 score: 294.3
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 304..317
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 84..474 e-value: 6.1E-117 score: 393.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..86
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 13..470
None	No IPR available	PANTHER	PTHR31375:SF119	POLYGALACTURONASE/GLYCOSIDE HYDROLASE FAMILY PROTEIN	coord: 13..470
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 87..466

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012916.1	MELO3C012916.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity