Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCTTCTGTCCCTGTAAACTGGCCTTCCCCTTCCACCAAATCTGCTGCTTTAACAACAAACCGCCCTGCTGGTAGTTCTTCAGGTAACCAACAACAGCAACCGCCGCTTCAGCATCCGCAGCAGCATATTTTGCAACAGCAACAAGCAACCATGACACCTCGAACTAAAGTACCAAATAATAATAGCTTGCCCTCATCAGTAGCAACCAAGTTTCCTTATAATGCCCCCCCGGGTTTCTCGCAACCGTTGATACAATGCGACAATTCTATCCAGTCTCCTGCGCAGAAGAACTCGGGAAGAATGGTGGCCTCCGTCGTCCCTATGACATCTCTCCATCTTGCTTCCTCCACTGCAGTCCATAAGAACACTCAGCAAAAAGGAAGTTCTCCTCAAGGCCAGACCCAGATATCTTTTGGGGGAGATTTCAAGCCAGCTTTTACACAGATGCAACACATTCCAACTAGCGTTCACTCTCCATCTCACTTGGTTACTGGGTCACCATCTAGCAGTGGAAAATTAAGAAACGCAGGCAGTAAAACCAGTTCATCAGTCGCTCCCGTGCAAGCAAAGCAGGATGAAAGCTCATCGACCGGAGCTGGCCAGAAATCCTCTCCCGTCTGTGGTAGAAATGTGCCTTCAATCTTGAACACATGCCCCAGTCATCTCTCAGAACTAAAATACTAG
mRNA sequence
ATGTCATCTTCTGTCCCTGTAAACTGGCCTTCCCCTTCCACCAAATCTGCTGCTTTAACAACAAACCGCCCTGCTGGTAGTTCTTCAGGTAACCAACAACAGCAACCGCCGCTTCAGCATCCGCAGCAGCATATTTTGCAACAGCAACAAGCAACCATGACACCTCGAACTAAAGTACCAAATAATAATAGCTTGCCCTCATCAGTAGCAACCAAGTTTCCTTATAATGCCCCCCCGGGTTTCTCGCAACCGTTGATACAATGCGACAATTCTATCCAGTCTCCTGCGCAGAAGAACTCGGGAAGAATGGTGGCCTCCGTCGTCCCTATGACATCTCTCCATCTTGCTTCCTCCACTGCAGTCCATAAGAACACTCAGCAAAAAGGAAGTTCTCCTCAAGGCCAGACCCAGATATCTTTTGGGGGAGATTTCAAGCCAGCTTTTACACAGATGCAACACATTCCAACTAGCGTTCACTCTCCATCTCACTTGGTTACTGGGTCACCATCTAGCAGTGGAAAATTAAGAAACGCAGGCAGTAAAACCAGTTCATCAGTCGCTCCCGTGCAAGCAAAGCAGGATGAAAGCTCATCGACCGGAGCTGGCCAGAAATCCTCTCCCGTCTGTGGTAGAAATGTGCCTTCAATCTTGAACACATGCCCCAGTCATCTCTCAGAACTAAAATACTAG
Coding sequence (CDS)
ATGTCATCTTCTGTCCCTGTAAACTGGCCTTCCCCTTCCACCAAATCTGCTGCTTTAACAACAAACCGCCCTGCTGGTAGTTCTTCAGGTAACCAACAACAGCAACCGCCGCTTCAGCATCCGCAGCAGCATATTTTGCAACAGCAACAAGCAACCATGACACCTCGAACTAAAGTACCAAATAATAATAGCTTGCCCTCATCAGTAGCAACCAAGTTTCCTTATAATGCCCCCCCGGGTTTCTCGCAACCGTTGATACAATGCGACAATTCTATCCAGTCTCCTGCGCAGAAGAACTCGGGAAGAATGGTGGCCTCCGTCGTCCCTATGACATCTCTCCATCTTGCTTCCTCCACTGCAGTCCATAAGAACACTCAGCAAAAAGGAAGTTCTCCTCAAGGCCAGACCCAGATATCTTTTGGGGGAGATTTCAAGCCAGCTTTTACACAGATGCAACACATTCCAACTAGCGTTCACTCTCCATCTCACTTGGTTACTGGGTCACCATCTAGCAGTGGAAAATTAAGAAACGCAGGCAGTAAAACCAGTTCATCAGTCGCTCCCGTGCAAGCAAAGCAGGATGAAAGCTCATCGACCGGAGCTGGCCAGAAATCCTCTCCCGTCTGTGGTAGAAATGTGCCTTCAATCTTGAACACATGCCCCAGTCATCTCTCAGAACTAAAATACTAG
Protein sequence
MSSSVPVNWPSPSTKSAALTTNRPAGSSSGNQQQQPPLQHPQQHILQQQQATMTPRTKVPNNNSLPSSVATKFPYNAPPGFSQPLIQCDNSIQSPAQKNSGRMVASVVPMTSLHLASSTAVHKNTQQKGSSPQGQTQISFGGDFKPAFTQMQHIPTSVHSPSHLVTGSPSSSGKLRNAGSKTSSSVAPVQAKQDESSSTGAGQKSSPVCGRNVPSILNTCPSHLSELKY
Homology
BLAST of Sgr019691 vs. NCBI nr
Match:
XP_022150281.1 (protein TIME FOR COFFEE isoform X1 [Momordica charantia])
HSP 1 Score: 346.3 bits (887), Expect = 2.0e-91
Identity = 194/230 (84.35%), Postives = 199/230 (86.52%), Query Frame = 0
Query: 1 MSSSVPVNWPSPSTKSAALTTNRPAGSSSGNQQQQPPLQHPQQHILQQQQATMTPRTKVP 60
M+SS PVNWPSPSTKSAALTTNR A SSSGNQQQQP LQ PQQHILQQQQATM RTKVP
Sbjct: 1058 MTSSAPVNWPSPSTKSAALTTNRSAASSSGNQQQQPLLQLPQQHILQQQQATMMSRTKVP 1117
Query: 61 NNNSLPSSVATKFPYNAPPGFSQPLIQCDNSIQSPAQKNSGRMVASVVPMTSLHLASSTA 120
NNSLPSSV KFPYNAPPGFSQPL+ CD+S AQKNSGRMVASVVPMTSLHLASS A
Sbjct: 1118 ANNSLPSSVGPKFPYNAPPGFSQPLMHCDDS----AQKNSGRMVASVVPMTSLHLASSPA 1177
Query: 121 VHKNT-QQKGSSPQGQTQISFGGDFKPAFTQMQHIPTSVHSPSHLVTGSPSSSGKLRNAG 180
V KN+ QQKGS+PQGQTQISFGGDFKPAFTQMQHIPTS H SPSSSGKLRN G
Sbjct: 1178 VSKNSPQQKGSTPQGQTQISFGGDFKPAFTQMQHIPTSSH--------SPSSSGKLRNTG 1237
Query: 181 SKTSSSVAPVQAKQDESSSTGAGQKSSPVCGRNVPSILNTCPSHLSELKY 230
SKTSSSVAP Q KQDESSSTG GQKSSPVCGRNVPSILNTCPSHLSELKY
Sbjct: 1238 SKTSSSVAPPQPKQDESSSTGGGQKSSPVCGRNVPSILNTCPSHLSELKY 1275
BLAST of Sgr019691 vs. NCBI nr
Match:
XP_022150282.1 (protein TIME FOR COFFEE isoform X2 [Momordica charantia])
HSP 1 Score: 346.3 bits (887), Expect = 2.0e-91
Identity = 194/230 (84.35%), Postives = 199/230 (86.52%), Query Frame = 0
Query: 1 MSSSVPVNWPSPSTKSAALTTNRPAGSSSGNQQQQPPLQHPQQHILQQQQATMTPRTKVP 60
M+SS PVNWPSPSTKSAALTTNR A SSSGNQQQQP LQ PQQHILQQQQATM RTKVP
Sbjct: 1046 MTSSAPVNWPSPSTKSAALTTNRSAASSSGNQQQQPLLQLPQQHILQQQQATMMSRTKVP 1105
Query: 61 NNNSLPSSVATKFPYNAPPGFSQPLIQCDNSIQSPAQKNSGRMVASVVPMTSLHLASSTA 120
NNSLPSSV KFPYNAPPGFSQPL+ CD+S AQKNSGRMVASVVPMTSLHLASS A
Sbjct: 1106 ANNSLPSSVGPKFPYNAPPGFSQPLMHCDDS----AQKNSGRMVASVVPMTSLHLASSPA 1165
Query: 121 VHKNT-QQKGSSPQGQTQISFGGDFKPAFTQMQHIPTSVHSPSHLVTGSPSSSGKLRNAG 180
V KN+ QQKGS+PQGQTQISFGGDFKPAFTQMQHIPTS H SPSSSGKLRN G
Sbjct: 1166 VSKNSPQQKGSTPQGQTQISFGGDFKPAFTQMQHIPTSSH--------SPSSSGKLRNTG 1225
Query: 181 SKTSSSVAPVQAKQDESSSTGAGQKSSPVCGRNVPSILNTCPSHLSELKY 230
SKTSSSVAP Q KQDESSSTG GQKSSPVCGRNVPSILNTCPSHLSELKY
Sbjct: 1226 SKTSSSVAPPQPKQDESSSTGGGQKSSPVCGRNVPSILNTCPSHLSELKY 1263
BLAST of Sgr019691 vs. NCBI nr
Match:
XP_004147004.1 (protein TIME FOR COFFEE isoform X1 [Cucumis sativus] >KGN44812.1 hypothetical protein Csa_016126 [Cucumis sativus])
HSP 1 Score: 323.6 bits (828), Expect = 1.4e-84
Identity = 192/238 (80.67%), Postives = 199/238 (83.61%), Query Frame = 0
Query: 1 MSSSVPVNWPSPSTKSAALTTNRPAGSSSGNQQQQPPLQHP-QQHILQQQQAT----MTP 60
M+SSVPVNWPSPS KSAA TTNRPAGSSSGNQQQQP LQ P QQHILQQQQA M P
Sbjct: 1050 MTSSVPVNWPSPSNKSAA-TTNRPAGSSSGNQQQQPLLQLPQQQHILQQQQAAMGPRMAP 1109
Query: 61 RTKVPNNNSLPSSVATKFPYNAPPGFSQPLIQCDNSIQSPAQKNSGRMVASVVPMTSLHL 120
RTKVP NN+LPSS TKFP N PPGFSQPLIQCDNSIQSPAQKNSGRM ASVVPMTSLHL
Sbjct: 1110 RTKVPTNNTLPSSATTKFPCNPPPGFSQPLIQCDNSIQSPAQKNSGRMTASVVPMTSLHL 1169
Query: 121 -ASSTAVHKNT-QQKGSS-PQGQTQISF-GGDFKPAFTQMQHIPTSVHSPSHLVTGSPSS 180
+SST VHK++ QQKGSS PQGQTQISF GGDFKPA+T MQHIPTS H SPSS
Sbjct: 1170 SSSSTPVHKSSIQQKGSSTPQGQTQISFGGGDFKPAYTPMQHIPTSGH--------SPSS 1229
Query: 181 SGKLRNAGSKTSSSVAPVQAKQDESSSTGAGQKSSPVCGRNVPSILNTCPSHLSELKY 230
SGKLRN SKT+ SV P Q KQDESSSTGAGQKSSPVCGRNVPSILNTCPS LSELKY
Sbjct: 1230 SGKLRNTTSKTNPSVTPTQQKQDESSSTGAGQKSSPVCGRNVPSILNTCPSQLSELKY 1278
BLAST of Sgr019691 vs. NCBI nr
Match:
XP_011659302.1 (protein TIME FOR COFFEE isoform X2 [Cucumis sativus])
HSP 1 Score: 323.6 bits (828), Expect = 1.4e-84
Identity = 192/238 (80.67%), Postives = 199/238 (83.61%), Query Frame = 0
Query: 1 MSSSVPVNWPSPSTKSAALTTNRPAGSSSGNQQQQPPLQHP-QQHILQQQQAT----MTP 60
M+SSVPVNWPSPS KSAA TTNRPAGSSSGNQQQQP LQ P QQHILQQQQA M P
Sbjct: 1038 MTSSVPVNWPSPSNKSAA-TTNRPAGSSSGNQQQQPLLQLPQQQHILQQQQAAMGPRMAP 1097
Query: 61 RTKVPNNNSLPSSVATKFPYNAPPGFSQPLIQCDNSIQSPAQKNSGRMVASVVPMTSLHL 120
RTKVP NN+LPSS TKFP N PPGFSQPLIQCDNSIQSPAQKNSGRM ASVVPMTSLHL
Sbjct: 1098 RTKVPTNNTLPSSATTKFPCNPPPGFSQPLIQCDNSIQSPAQKNSGRMTASVVPMTSLHL 1157
Query: 121 -ASSTAVHKNT-QQKGSS-PQGQTQISF-GGDFKPAFTQMQHIPTSVHSPSHLVTGSPSS 180
+SST VHK++ QQKGSS PQGQTQISF GGDFKPA+T MQHIPTS H SPSS
Sbjct: 1158 SSSSTPVHKSSIQQKGSSTPQGQTQISFGGGDFKPAYTPMQHIPTSGH--------SPSS 1217
Query: 181 SGKLRNAGSKTSSSVAPVQAKQDESSSTGAGQKSSPVCGRNVPSILNTCPSHLSELKY 230
SGKLRN SKT+ SV P Q KQDESSSTGAGQKSSPVCGRNVPSILNTCPS LSELKY
Sbjct: 1218 SGKLRNTTSKTNPSVTPTQQKQDESSSTGAGQKSSPVCGRNVPSILNTCPSQLSELKY 1266
BLAST of Sgr019691 vs. NCBI nr
Match:
XP_022953467.1 (protein TIME FOR COFFEE-like isoform X2 [Cucurbita moschata])
HSP 1 Score: 322.8 bits (826), Expect = 2.4e-84
Identity = 182/231 (78.79%), Postives = 192/231 (83.12%), Query Frame = 0
Query: 1 MSSSVPVNWPSPSTKSAALTTNRPAGSSSGNQQQQPPLQHPQQHILQQQQATMTPRTKVP 60
M+SSVPVNWPSPS TTNRPAGSSSGNQ QQHILQQQQATM PR+K P
Sbjct: 1024 MTSSVPVNWPSPS------TTNRPAGSSSGNQ---------QQHILQQQQATMVPRSKGP 1083
Query: 61 NNNSLPSSVATKFPYNAPPGFSQPLIQCDNSIQSPAQKNSGRMVASVVPMTSLHLASSTA 120
+NNSLPSS TKFP +APPGFSQPLIQCDNSIQSPAQKNSGRMV +VVPMTSLHLASSTA
Sbjct: 1084 SNNSLPSSATTKFPCSAPPGFSQPLIQCDNSIQSPAQKNSGRMVGTVVPMTSLHLASSTA 1143
Query: 121 VHK-NTQQKG-SSPQGQTQISFGGDFKPAFTQMQHIPTSVHSPSHLVTGSPSSSGKLRNA 180
VHK +TQQKG ++P GQTQISFGGDFKP FTQMQH+PT H SPSSSGKLRN
Sbjct: 1144 VHKSSTQQKGNNTPHGQTQISFGGDFKPGFTQMQHLPTGGH--------SPSSSGKLRNT 1203
Query: 181 GSKTSSSVAPVQAKQDESSSTGAGQKSSPVCGRNVPSILNTCPSHLSELKY 230
SKTS SVAPVQ KQDESSSTGAG+KSSPVCGRNVPSILNTCPSHLSELKY
Sbjct: 1204 SSKTSPSVAPVQPKQDESSSTGAGKKSSPVCGRNVPSILNTCPSHLSELKY 1231
BLAST of Sgr019691 vs. ExPASy TrEMBL
Match:
A0A6J1DAB7 (protein TIME FOR COFFEE isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018485 PE=4 SV=1)
HSP 1 Score: 346.3 bits (887), Expect = 9.9e-92
Identity = 194/230 (84.35%), Postives = 199/230 (86.52%), Query Frame = 0
Query: 1 MSSSVPVNWPSPSTKSAALTTNRPAGSSSGNQQQQPPLQHPQQHILQQQQATMTPRTKVP 60
M+SS PVNWPSPSTKSAALTTNR A SSSGNQQQQP LQ PQQHILQQQQATM RTKVP
Sbjct: 1046 MTSSAPVNWPSPSTKSAALTTNRSAASSSGNQQQQPLLQLPQQHILQQQQATMMSRTKVP 1105
Query: 61 NNNSLPSSVATKFPYNAPPGFSQPLIQCDNSIQSPAQKNSGRMVASVVPMTSLHLASSTA 120
NNSLPSSV KFPYNAPPGFSQPL+ CD+S AQKNSGRMVASVVPMTSLHLASS A
Sbjct: 1106 ANNSLPSSVGPKFPYNAPPGFSQPLMHCDDS----AQKNSGRMVASVVPMTSLHLASSPA 1165
Query: 121 VHKNT-QQKGSSPQGQTQISFGGDFKPAFTQMQHIPTSVHSPSHLVTGSPSSSGKLRNAG 180
V KN+ QQKGS+PQGQTQISFGGDFKPAFTQMQHIPTS H SPSSSGKLRN G
Sbjct: 1166 VSKNSPQQKGSTPQGQTQISFGGDFKPAFTQMQHIPTSSH--------SPSSSGKLRNTG 1225
Query: 181 SKTSSSVAPVQAKQDESSSTGAGQKSSPVCGRNVPSILNTCPSHLSELKY 230
SKTSSSVAP Q KQDESSSTG GQKSSPVCGRNVPSILNTCPSHLSELKY
Sbjct: 1226 SKTSSSVAPPQPKQDESSSTGGGQKSSPVCGRNVPSILNTCPSHLSELKY 1263
BLAST of Sgr019691 vs. ExPASy TrEMBL
Match:
A0A6J1DB26 (protein TIME FOR COFFEE isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018485 PE=4 SV=1)
HSP 1 Score: 346.3 bits (887), Expect = 9.9e-92
Identity = 194/230 (84.35%), Postives = 199/230 (86.52%), Query Frame = 0
Query: 1 MSSSVPVNWPSPSTKSAALTTNRPAGSSSGNQQQQPPLQHPQQHILQQQQATMTPRTKVP 60
M+SS PVNWPSPSTKSAALTTNR A SSSGNQQQQP LQ PQQHILQQQQATM RTKVP
Sbjct: 1058 MTSSAPVNWPSPSTKSAALTTNRSAASSSGNQQQQPLLQLPQQHILQQQQATMMSRTKVP 1117
Query: 61 NNNSLPSSVATKFPYNAPPGFSQPLIQCDNSIQSPAQKNSGRMVASVVPMTSLHLASSTA 120
NNSLPSSV KFPYNAPPGFSQPL+ CD+S AQKNSGRMVASVVPMTSLHLASS A
Sbjct: 1118 ANNSLPSSVGPKFPYNAPPGFSQPLMHCDDS----AQKNSGRMVASVVPMTSLHLASSPA 1177
Query: 121 VHKNT-QQKGSSPQGQTQISFGGDFKPAFTQMQHIPTSVHSPSHLVTGSPSSSGKLRNAG 180
V KN+ QQKGS+PQGQTQISFGGDFKPAFTQMQHIPTS H SPSSSGKLRN G
Sbjct: 1178 VSKNSPQQKGSTPQGQTQISFGGDFKPAFTQMQHIPTSSH--------SPSSSGKLRNTG 1237
Query: 181 SKTSSSVAPVQAKQDESSSTGAGQKSSPVCGRNVPSILNTCPSHLSELKY 230
SKTSSSVAP Q KQDESSSTG GQKSSPVCGRNVPSILNTCPSHLSELKY
Sbjct: 1238 SKTSSSVAPPQPKQDESSSTGGGQKSSPVCGRNVPSILNTCPSHLSELKY 1275
BLAST of Sgr019691 vs. ExPASy TrEMBL
Match:
A0A0A0K8W1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G388450 PE=4 SV=1)
HSP 1 Score: 323.6 bits (828), Expect = 6.9e-85
Identity = 192/238 (80.67%), Postives = 199/238 (83.61%), Query Frame = 0
Query: 1 MSSSVPVNWPSPSTKSAALTTNRPAGSSSGNQQQQPPLQHP-QQHILQQQQAT----MTP 60
M+SSVPVNWPSPS KSAA TTNRPAGSSSGNQQQQP LQ P QQHILQQQQA M P
Sbjct: 1050 MTSSVPVNWPSPSNKSAA-TTNRPAGSSSGNQQQQPLLQLPQQQHILQQQQAAMGPRMAP 1109
Query: 61 RTKVPNNNSLPSSVATKFPYNAPPGFSQPLIQCDNSIQSPAQKNSGRMVASVVPMTSLHL 120
RTKVP NN+LPSS TKFP N PPGFSQPLIQCDNSIQSPAQKNSGRM ASVVPMTSLHL
Sbjct: 1110 RTKVPTNNTLPSSATTKFPCNPPPGFSQPLIQCDNSIQSPAQKNSGRMTASVVPMTSLHL 1169
Query: 121 -ASSTAVHKNT-QQKGSS-PQGQTQISF-GGDFKPAFTQMQHIPTSVHSPSHLVTGSPSS 180
+SST VHK++ QQKGSS PQGQTQISF GGDFKPA+T MQHIPTS H SPSS
Sbjct: 1170 SSSSTPVHKSSIQQKGSSTPQGQTQISFGGGDFKPAYTPMQHIPTSGH--------SPSS 1229
Query: 181 SGKLRNAGSKTSSSVAPVQAKQDESSSTGAGQKSSPVCGRNVPSILNTCPSHLSELKY 230
SGKLRN SKT+ SV P Q KQDESSSTGAGQKSSPVCGRNVPSILNTCPS LSELKY
Sbjct: 1230 SGKLRNTTSKTNPSVTPTQQKQDESSSTGAGQKSSPVCGRNVPSILNTCPSQLSELKY 1278
BLAST of Sgr019691 vs. ExPASy TrEMBL
Match:
A0A6J1GNB1 (protein TIME FOR COFFEE-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456008 PE=4 SV=1)
HSP 1 Score: 322.8 bits (826), Expect = 1.2e-84
Identity = 182/231 (78.79%), Postives = 192/231 (83.12%), Query Frame = 0
Query: 1 MSSSVPVNWPSPSTKSAALTTNRPAGSSSGNQQQQPPLQHPQQHILQQQQATMTPRTKVP 60
M+SSVPVNWPSPS TTNRPAGSSSGNQ QQHILQQQQATM PR+K P
Sbjct: 1024 MTSSVPVNWPSPS------TTNRPAGSSSGNQ---------QQHILQQQQATMVPRSKGP 1083
Query: 61 NNNSLPSSVATKFPYNAPPGFSQPLIQCDNSIQSPAQKNSGRMVASVVPMTSLHLASSTA 120
+NNSLPSS TKFP +APPGFSQPLIQCDNSIQSPAQKNSGRMV +VVPMTSLHLASSTA
Sbjct: 1084 SNNSLPSSATTKFPCSAPPGFSQPLIQCDNSIQSPAQKNSGRMVGTVVPMTSLHLASSTA 1143
Query: 121 VHK-NTQQKG-SSPQGQTQISFGGDFKPAFTQMQHIPTSVHSPSHLVTGSPSSSGKLRNA 180
VHK +TQQKG ++P GQTQISFGGDFKP FTQMQH+PT H SPSSSGKLRN
Sbjct: 1144 VHKSSTQQKGNNTPHGQTQISFGGDFKPGFTQMQHLPTGGH--------SPSSSGKLRNT 1203
Query: 181 GSKTSSSVAPVQAKQDESSSTGAGQKSSPVCGRNVPSILNTCPSHLSELKY 230
SKTS SVAPVQ KQDESSSTGAG+KSSPVCGRNVPSILNTCPSHLSELKY
Sbjct: 1204 SSKTSPSVAPVQPKQDESSSTGAGKKSSPVCGRNVPSILNTCPSHLSELKY 1231
BLAST of Sgr019691 vs. ExPASy TrEMBL
Match:
A0A6J1GN28 (protein TIME FOR COFFEE-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456008 PE=4 SV=1)
HSP 1 Score: 322.8 bits (826), Expect = 1.2e-84
Identity = 182/231 (78.79%), Postives = 192/231 (83.12%), Query Frame = 0
Query: 1 MSSSVPVNWPSPSTKSAALTTNRPAGSSSGNQQQQPPLQHPQQHILQQQQATMTPRTKVP 60
M+SSVPVNWPSPS TTNRPAGSSSGNQ QQHILQQQQATM PR+K P
Sbjct: 1035 MTSSVPVNWPSPS------TTNRPAGSSSGNQ---------QQHILQQQQATMVPRSKGP 1094
Query: 61 NNNSLPSSVATKFPYNAPPGFSQPLIQCDNSIQSPAQKNSGRMVASVVPMTSLHLASSTA 120
+NNSLPSS TKFP +APPGFSQPLIQCDNSIQSPAQKNSGRMV +VVPMTSLHLASSTA
Sbjct: 1095 SNNSLPSSATTKFPCSAPPGFSQPLIQCDNSIQSPAQKNSGRMVGTVVPMTSLHLASSTA 1154
Query: 121 VHK-NTQQKG-SSPQGQTQISFGGDFKPAFTQMQHIPTSVHSPSHLVTGSPSSSGKLRNA 180
VHK +TQQKG ++P GQTQISFGGDFKP FTQMQH+PT H SPSSSGKLRN
Sbjct: 1155 VHKSSTQQKGNNTPHGQTQISFGGDFKPGFTQMQHLPTGGH--------SPSSSGKLRNT 1214
Query: 181 GSKTSSSVAPVQAKQDESSSTGAGQKSSPVCGRNVPSILNTCPSHLSELKY 230
SKTS SVAPVQ KQDESSSTGAG+KSSPVCGRNVPSILNTCPSHLSELKY
Sbjct: 1215 SSKTSPSVAPVQPKQDESSSTGAGKKSSPVCGRNVPSILNTCPSHLSELKY 1242
BLAST of Sgr019691 vs. TAIR 10
Match:
AT3G63180.1 (TIC-like )
HSP 1 Score: 68.6 bits (166), Expect = 7.7e-12
Identity = 56/131 (42.75%), Postives = 73/131 (55.73%), Query Frame = 0
Query: 109 PMTSLHLASSTAVHKNTQQKGSSPQ----GQTQISFGGDFKPAFTQMQHIPTSVHSPSHL 168
P TS L S T++ N +Q S Q GQTQISF P +Q + + SPS
Sbjct: 855 PATSSSLTSCTSL--NLKQFQSQQQIRTHGQTQISFAAPTNPQPSQGKQGRSGGSSPS-- 914
Query: 169 VTGSPSSSGKLRNAGSKTSSSVA------PVQAKQDESSSTGAGQKSSPVCGRNVPSILN 228
VTGS S + A SK S+S A P+ + E+ ++G+ QK+SPVCGR VP I+
Sbjct: 915 VTGSASHG---KPANSKVSNSKALLLSPVPLSQEHTENPASGSTQKNSPVCGRTVPPIIT 974
Query: 229 TCPSHLSELKY 230
+CP HLSELKY
Sbjct: 975 SCPGHLSELKY 978
BLAST of Sgr019691 vs. TAIR 10
Match:
AT3G63180.2 (TIC-like )
HSP 1 Score: 68.6 bits (166), Expect = 7.7e-12
Identity = 56/131 (42.75%), Postives = 73/131 (55.73%), Query Frame = 0
Query: 109 PMTSLHLASSTAVHKNTQQKGSSPQ----GQTQISFGGDFKPAFTQMQHIPTSVHSPSHL 168
P TS L S T++ N +Q S Q GQTQISF P +Q + + SPS
Sbjct: 847 PATSSSLTSCTSL--NLKQFQSQQQIRTHGQTQISFAAPTNPQPSQGKQGRSGGSSPS-- 906
Query: 169 VTGSPSSSGKLRNAGSKTSSSVA------PVQAKQDESSSTGAGQKSSPVCGRNVPSILN 228
VTGS S + A SK S+S A P+ + E+ ++G+ QK+SPVCGR VP I+
Sbjct: 907 VTGSASHG---KPANSKVSNSKALLLSPVPLSQEHTENPASGSTQKNSPVCGRTVPPIIT 966
Query: 229 TCPSHLSELKY 230
+CP HLSELKY
Sbjct: 967 SCPGHLSELKY 970
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022150281.1 | 2.0e-91 | 84.35 | protein TIME FOR COFFEE isoform X1 [Momordica charantia] | [more] |
| XP_022150282.1 | 2.0e-91 | 84.35 | protein TIME FOR COFFEE isoform X2 [Momordica charantia] | [more] |
| XP_004147004.1 | 1.4e-84 | 80.67 | protein TIME FOR COFFEE isoform X1 [Cucumis sativus] >KGN44812.1 hypothetical pr... | [more] |
| XP_011659302.1 | 1.4e-84 | 80.67 | protein TIME FOR COFFEE isoform X2 [Cucumis sativus] | [more] |
| XP_022953467.1 | 2.4e-84 | 78.79 | protein TIME FOR COFFEE-like isoform X2 [Cucurbita moschata] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1DAB7 | 9.9e-92 | 84.35 | protein TIME FOR COFFEE isoform X2 OS=Momordica charantia OX=3673 GN=LOC11101848... | [more] |
| A0A6J1DB26 | 9.9e-92 | 84.35 | protein TIME FOR COFFEE isoform X1 OS=Momordica charantia OX=3673 GN=LOC11101848... | [more] |
| A0A0A0K8W1 | 6.9e-85 | 80.67 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G388450 PE=4 SV=1 | [more] |
| A0A6J1GNB1 | 1.2e-84 | 78.79 | protein TIME FOR COFFEE-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114... | [more] |
| A0A6J1GN28 | 1.2e-84 | 78.79 | protein TIME FOR COFFEE-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114... | [more] |
