Spg039978 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGTTCAACTATCCTAAACCACGGGCACAGACGTGGCTAACACAAGCACACACGAGCCGAGCCAACCAGTCATTTGCAATTTGCCCTTTTAGGATTGGGTTGGCCGGTCCGGTCTGAACCGGAAAAATAATCCAAAGCCGAATCAAGGCAACCGTTGTTAAAATTCCCTCTCCTTCTTCCCCGAGATGTTTCAGAGCTCCTGGACTTGAAAAAGGAAAAGGAAACCCTAAAATAAAATTTGAGCATCTGTCAATCAAAGAGATTTGGTTCACGACAGTAACTGGAAGGCTCTTTTGCGTCTGCAACTTTAGTCGAACAAACTTCAAAGGCCGCAAGGAAGCTGTGGACTGAGGAACAAATTCTTCAGGCAGTAAGGTATCGTATACAAACTTCCTTGTATTGTATTGATTGTCTATGTGTCCTTGCTTCGTTGGATTGAAAAAAAAAAAAAAACCAAACCAGATCTAAGTTATTGTCTTTTGATTATAAATTGTCCTCCCTCCCTTCCATCAGACAACTCAAATTAGGACTTAGTTTGATGAAGTTGCTTCGATTGACTGAACAAGCTCCAAATTATCTGTAGGATGCTGGTGAGCCATTTTTTGAGAATGGAAGTTGTCTCTTGAAATTCTCTCATAAACGGTACTTGAAATTGGAATGAGAAGAGTCCATACGCTTCTTTTTAATAAAAATAGAAGGATACATTCATTAATGACATACAGTAAATTCAAAATTGATAAGCCAACTTAGTGGTTCAACTTGAACCAACTCACTTTTCCTTTCCCAATATTTTGTCCCGATCCCGATACATTTAATGGATGTACTTAAAAGAATGAGGTAAAATTGACATATATTTAGAATTTGGAGGGTAAAATGGAGAGGTAAAGTTTCTCCCTATAGCCACTTTTATATAGTATATATATATATATAAGTATAAGTATAGATTTGTGGCTAAGTAGGATTGTTATTATGGTTGGTTAGACTGTTTTAGCTGGGTTTGGCCCTTTGATGGTTGAGTTTTGGAACTCTTTTACCTGGTTGATTTTATGGTTATGTTTGGTTTGAAATGTTGTTGGAGTTATGTTGAGAAGAAGTTGTTGAATTTTGTATGATTTATTAGTTAGTTAACAAACAGTTTTCTAATTTAATTTCGAGGTGATATTAGTTTTACATGTTCATGTTTAGGATTCAATTTGATGAAATTAGAACTCTAAGGTTCAAAGTGATTAGTATAGGGATCAAAATATGAAAAAGAACATTTGGAATTCATAACATAAATGACTATGATAGAACTAAACGGGCCAAGCTGGACAAAAGATGGTGTCTACCTCTTCTTTTAAATTTTGGGCAAGGTGTAAAACCCCCCAAAAAAGAAAATCTATATTATTTTCTAGTGGAAAAGGTCTCATCATTTAGCCAAAGCTTCATTTTTTACATTACTAGCATCACTGAGCCGCTGACAAATTCAATTTATTTTTTCAGAGGTATTTGTAGGAAACATGAAGAGAACTACAATTGATTCTGTCTCTGATGGCGAGGAAGAATATGTATTGCTTGATCTTGGCGATATATCGCTGCTTGACATTCCACCCAATGCTCCATATGTTCTATCTGTATGTTCCTTAGCTAATCTAATTTCAAGTAATAAAGTTTTATCAACGAGCTAAGTCTTGATGTTTAATTGCTTGCTTTCAAGATGCATGGTTAAATTAGAAATGCAATGTCCATATAGGATATTTACTATATATTTGCATGTAGCTTTAGGAAATTTACTCTTCCTTTAATGCACTACGGGGCAACCTCTCGAACTTGAAAGTCCTTGCTACATTGCTTCCTGTTTGCTACTGCATATTATACATTAGCCTTAGTAAAATGGTCGGTCATACCAAACTTGGTGGAGAGTTGAGCCAAAAAAGGGGGCATCTTTTTGATTTTGAAAATAATGAATACAAGATGGACAGAAGCCCCACCTTCATAAATTGGTTAGATTTAAGGGAAAGTAGATCAAATTACATTAGTTATCATCAAGTAAAAATGAAATAACCTCAGGTAAAAACTATTCCGTACAACTACTCAAAGTAAGGTTTGTTTCTTTCCTAAAAAAAGACTACCCAAATTAAGGTTTTGATTTAACCCCTATGCCTATATCAAGAGCAGTGTTAAGTTTATATCCATGACTGCTGATCAACTGACAGGTATTAATCACCAACCAAGCCAATTTTTTTATTACAAAATTTTTCCAACTGTTAATACTCCTCTACTAAACTTCAGTGCTAGACCTAGACACAACATGTATTTTCCTGGGGTATGTTGTGCCGGTTTGATTAGGTTTTTGATAATTACGTGCACTGAGTTTTAAGAATTAAATTGTTATGTATGTAGAGTTGGCAAGCATTTTGTTAATCTGTATGGTTTTTTAAAGTTTTGATTAATTTGTTTTGCAGGGTTTGGACACCATGAATCCAGTGTTGACTATATGTGACAAAATTAAGATGGTAAGTCTTTAATAAGATACGAGCTCTGCATCTAGATTTCTGCAGCAGAACCTGAATGTTTAAGCTCTTTGGCATTACTGAGTTTACACATGAGCATCTTTCTGCACAATTTTCCACTTTGCAGTTGATTTTTTTCTCAAGTTATATCTTCTGCCTGCCTCTCTGTTTGGAAGGAACACGGGGCTTCACTTGCTATGCTTGAGTTATTTATGATTTATCTAGGTGAAGTTGAATCTGATATAAGGATAAGCTTTCAGATGTATTGTAATTTGATGTGCTAATGCTCACAATTTAAATGAAATTAATCTTACTCTTTTATTAATCTTCCTTTGGGGATGTTAGAGTTCTTTGTTTGGGGTTCTTCTTTGGGGGTGCATCACAGGGATGAGAGATCTTTGTGATCTTTGATGGAGAAGGTGCTCTTGCATACTCCCTTTAGGGAGAAAGGCAAAGTGTTGTTTGTTGTGATAGCTTGGCTTCTTTGTTGTTTTGTGGGGTATTTGGCTAGAGAAGAACTCTAGGATCTTTAGAGGGAGAAAGGCCGAGTGAAGAGGTTTGGGAAAGTATTAGCGCGGCCATTTTGTAATTATGATCTTGGTCTTGTTCTTTTGGATTGGAGTCCTTTTTATAGCCAGTTTTGGACTCCTGTTGTTCTTGGGTTTGTCTTTTGTATGTCCTTGTGTTTTTTCATTTATTCAATGAAAGCTCGATTTCTTACCCAAAAAAAAAATCCTACCCTTTCACTTTTTGTTGGGGATCAAGGCTGTCACTGTCTATATTTAATGAATAACAGGAAAACATATATAACTTTCGTATCAAAATCATTTTTCTTTATAAGATATTTCATAGAAAAATATTAATGCGTTAGATCTTTCCTATTTTGTGATCATACTGTATATTTAGTGGATTACTTATCTCTCTCTTTTTTAGGTTGGAGAGTACGAAGAAACAATAGGCACATGTCTTACCTTCGCAGAAGGTAAGTAACCTCACTTTATTATATTATCTTGGCATGTAAATATAAAATATATTATTTGGACTCATTGATTATTTCAAAACAATCTTCCAGCTTCATTCCCATAAATCTAAAGGAGATTTAACAATTTGACTCCTTAAATTTTATGCAAGTTTTCGATTTGTTCTTTAAACCGTAGAAAGAAAGTCCATCTGATCTCTGTACTTTAAATAATGTTGAATATGTTATATTTACTACTTTGCATATACGGTATGAACATTTCGATAGAGATCGGAAAACTATTCTCTTACACTGAAGTCATGTTCCCTACTGCAGAAGAAGTCTCTGTGGTTGAAGAAGAAGTTGGGCCATCTGAAACAAATCGTCTCACAGCAGAAGCAGTTGAACCAGAACAAACTCCAAGGAAGGAGTTGAAACCCATTGCTTCTGTACATAAGATCCTTAAATTTAAATTGTTGCCTGATTCTGCTGTTCCAAACTCAACATCTTAGCACACTAAACAGACTAATGTCTTTTTTGTATATATTACTTTTGTATGGTCCTAAATAAACTTGTTCATTGACTTATAACTTCTAACTTATCTAAGTTAAATATTACTTCTTTTTTTTTTTTTAAGTACAACGACGTTTGGGGGTGGAGG ATGAAGAGAACTACAATTGATTCTGTCTCTGATGGCGAGGAAGAATATGTATTGCTTGATCTTGGCGATATATCGCTGCTTGACATTCCACCCAATGCTCCATATGTTCTATCTGGTTTGGACACCATGAATCCAGTGTTGACTATATGTGACAAAATTAAGATGGTTGGAGAGTACGAAGAAACAATAGGCACATGTCTTACCTTCGCAGAAGAAGAAGTCTCTGTGGTTGAAGAAGAAGTTGGGCCATCTGAAACAAATCGTCTCACAGCAGAAGCAGTTGAACCAGAACAAACTCCAAGGAAGGAGTTGAAACCCATTGCTTCTGTACATAAGATCCTTAAATTTAAATTGTTGCCTGATTCTGCTGTTCCAAACTCAACATCTTAG ATGAAGAGAACTACAATTGATTCTGTCTCTGATGGCGAGGAAGAATATGTATTGCTTGATCTTGGCGATATATCGCTGCTTGACATTCCACCCAATGCTCCATATGTTCTATCTGGTTTGGACACCATGAATCCAGTGTTGACTATATGTGACAAAATTAAGATGGTTGGAGAGTACGAAGAAACAATAGGCACATGTCTTACCTTCGCAGAAGAAGAAGTCTCTGTGGTTGAAGAAGAAGTTGGGCCATCTGAAACAAATCGTCTCACAGCAGAAGCAGTTGAACCAGAACAAACTCCAAGGAAGGAGTTGAAACCCATTGCTTCTGTACATAAGATCCTTAAATTTAAATTGTTGCCTGATTCTGCTGTTCCAAACTCAACATCTTAG MKRTTIDSVSDGEEEYVLLDLGDISLLDIPPNAPYVLSGLDTMNPVLTICDKIKMVGEYEETIGTCLTFAEEEVSVVEEEVGPSETNRLTAEAVEPEQTPRKELKPIASVHKILKFKLLPDSAVPNSTS Homology
BLAST of Spg039978 vs. NCBI nr
Match: XP_022133708.1 (uncharacterized protein LOC111006225 [Momordica charantia]) HSP 1 Score: 220.7 bits (561), Expect = 7.3e-54 Identity = 115/131 (87.79%), Postives = 120/131 (91.60%), Query Frame = 0
BLAST of Spg039978 vs. NCBI nr
Match: XP_023550663.1 (uncharacterized protein LOC111808744 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550664.1 uncharacterized protein LOC111808744 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550665.1 uncharacterized protein LOC111808744 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550666.1 uncharacterized protein LOC111808744 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 211.1 bits (536), Expect = 5.8e-51 Identity = 108/134 (80.60%), Postives = 119/134 (88.81%), Query Frame = 0
BLAST of Spg039978 vs. NCBI nr
Match: XP_022993830.1 (uncharacterized protein LOC111489725 [Cucurbita maxima] >XP_022993831.1 uncharacterized protein LOC111489725 [Cucurbita maxima] >XP_022993832.1 uncharacterized protein LOC111489725 [Cucurbita maxima] >XP_022993833.1 uncharacterized protein LOC111489725 [Cucurbita maxima]) HSP 1 Score: 209.9 bits (533), Expect = 1.3e-50 Identity = 106/131 (80.92%), Postives = 119/131 (90.84%), Query Frame = 0
BLAST of Spg039978 vs. NCBI nr
Match: XP_022939121.1 (uncharacterized protein LOC111445121, partial [Cucurbita moschata]) HSP 1 Score: 209.1 bits (531), Expect = 2.2e-50 Identity = 106/134 (79.10%), Postives = 119/134 (88.81%), Query Frame = 0
BLAST of Spg039978 vs. NCBI nr
Match: XP_038885696.1 (uncharacterized protein LOC120075999 [Benincasa hispida]) HSP 1 Score: 208.8 bits (530), Expect = 2.9e-50 Identity = 107/129 (82.95%), Postives = 116/129 (89.92%), Query Frame = 0
BLAST of Spg039978 vs. ExPASy TrEMBL
Match: A0A6J1BZW5 (uncharacterized protein LOC111006225 OS=Momordica charantia OX=3673 GN=LOC111006225 PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 3.5e-54 Identity = 115/131 (87.79%), Postives = 120/131 (91.60%), Query Frame = 0
BLAST of Spg039978 vs. ExPASy TrEMBL
Match: A0A6J1JTZ1 (uncharacterized protein LOC111489725 OS=Cucurbita maxima OX=3661 GN=LOC111489725 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 6.2e-51 Identity = 106/131 (80.92%), Postives = 119/131 (90.84%), Query Frame = 0
BLAST of Spg039978 vs. ExPASy TrEMBL
Match: A0A6J1FF13 (uncharacterized protein LOC111445121 OS=Cucurbita moschata OX=3662 GN=LOC111445121 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 1.1e-50 Identity = 106/134 (79.10%), Postives = 119/134 (88.81%), Query Frame = 0
BLAST of Spg039978 vs. ExPASy TrEMBL
Match: A0A0A0LML8 (TFIIIC_sub6 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G406680 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 2.1e-46 Identity = 103/129 (79.84%), Postives = 111/129 (86.05%), Query Frame = 0
BLAST of Spg039978 vs. ExPASy TrEMBL
Match: A0A1S4DTV8 (general transcription factor 3C polypeptide 6-like OS=Cucumis melo OX=3656 GN=LOC103485483 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.3e-45 Identity = 101/129 (78.29%), Postives = 109/129 (84.50%), Query Frame = 0
BLAST of Spg039978 vs. TAIR 10
Match: AT3G15420.1 (Transcription factor TFIIIC, tau55-related protein ) HSP 1 Score: 97.1 bits (240), Expect = 1.1e-20 Identity = 57/108 (52.78%), Postives = 75/108 (69.44%), Query Frame = 0
BLAST of Spg039978 vs. TAIR 10
Match: AT1G80745.1 (Transcription factor TFIIIC, tau55-related protein ) HSP 1 Score: 92.0 bits (227), Expect = 3.6e-19 Identity = 52/110 (47.27%), Postives = 72/110 (65.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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