Spg039585 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg039585
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTranslation initiation factor IF-2
Locationscaffold10: 45918290 .. 45921536 (-)
RNA-Seq ExpressionSpg039585
SyntenySpg039585
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGAGAGGCTTGCAGTGGGAGAAGCGAATTTGGATGCGGATTCTTCACCTATTGGGTTGTGCTTGGAAGTGTTGTGGCCGGGGAGCTTCACTGCAGATCTAATTGGTTTTGCATTTAGGTGTCGGACTGTCGACGCGATGCTTTGGTATGGGCGTTGTGCTGGGAGCTGAGAGCGTAAACGAACGGTCTGGTTTGGTTTTTTTTGTTTTTGGCTTTGGAGTATTCTCGGTGCTACCTGTGATTTTTGAAAATTTTCGGCACGAGACTTGGGGGATTTAGACATGAATCGTAGCTTTAGGGCTTTGGAATCGCAAATGCAAGCTCCGGTAAAGCAGCGGCAGCAGCAAGTTGGGGGACTGAGGGCGTCGGTGATGAAAGATAAGGAGGAGGAGCTTGCTTTGTTCTTAGAAATGAGAAAGCGTGAGAAAGAGAGGAATGATCTTCTCTCTAACAACGCGGAAGAGTTCGATGCGCCTTTAGGTATGGCCTCTGTTTCTAACTTTGGACTTGCACTTCAGCTGCTCTGAGGTTTTGCTTTATGGCATTGTTCTGGAAATTTCTAGAATTCGTCCTTGATTGATAGTTAAAAAGTTTTTGTAGCCCTCGTTTCTTTTGTCTATCAGATGAATACTGATCCAGAAAGAAAAGGAGTAATCCACCGTTTTCTTTGACGTCTATTTTTGCTTATTCTACTGGAATTACGTTTTATCGAATTCAATTTCCCGTTTTGTGCAGGAACAAAACCAGGAACTTCTCCAATATTTAACATCTCATCAGCGACTCCAGCCCCTACACGCAAGACTGGTGCTGATGATTTTCTTAATTCTGACAATGATAAAAATGATTATGATTGGTAAAGTTGTCACCTTACACTTTTCGTTTTAGTTTATTGAATGAAATTCCCTATTTGAAGATTGCTGTTTTTATCCTGGCTCAACCGATCATTCATAGTGTTGAGAATAACTCAATGTCTCGATATCAGTAATTGACTTGGGAGGGTTTCCAAATGAAACCACGTCAAATTAGTACCAGGCAGTAGATACTTATGCCAAAGGAAGGTAGATAGGAAGCTTGAAATTAGAACAAGTTCTTATTCAATGTATCTGGACTAACATCTACGAAAAAAATATAACACCATAACATGATTTAAGCTTACATTTGAGAAAAGATAAAATTAGGGCAAATGTCGTAATTTACCAATAAGGGTGTAATTAACAAGTCAATGAGACCAAGAAATTTTTTTAACAGGTCATTTAAACCAAATAAATTGCTAAAACAGTTGTGAAGATTGTGTTCATGCATTGCAATCTTTCACTCGATTAACTCATCAATGTCAAAGGCTGATCCAGTTGGTTGAATTTAACTAAGATGAAACGAGTCAGATCTTATCCTTCCATATTCCGTTATTTCTTGTTGTGGGATGGTGGCAATGTGCAAATGTAAAACGGTTTAAAGAACCTACCTGCCACCTGGTTTAATTTGTCAAATTGGTCCATTTTGTTTCATTGAAATGGCACATATGGTTCGTGATTTGTGTGCCATGTATATTAGTTTCATTAAGAAATAATAACAGGATTTTAGAGAAAGTAAAAACAAGTACAGAGTACTTAAAACCATTTTTGTTGACAAGAAACAATCTTTTTATTGATAAATGAAAAATAAAGAAAAAAGTTCAAGAATACCAACTCCTAAAGGGATTAAAAAGAAACCAAAACATCCCAATAAAGAACAAAACTCCAAATATTACAAGAGCCAAAAAATATAAAGGGTATGATTCGTAAATTATACAAACCACAATGGTGTAATTTGCAATCCTTTTTTATGTTGTATATCAGTTATCATATCTGTATCATTAGTATGAACTCAAAAAAAAAAAAATCTGTATCATTTGTAGCCTGAGAGAGAAATGAATGGATCAAAATTTTGAACCATGATGTAAAAGAGTGTGGCTCTGATGAGTTATGTTAGTGATCTGAGAGAGATATGAGTGGACCAATTTGTTGAGGATCTCCATTCTGTTCAGGTTTCTGCTATGGCACTTATGTTGGTCTCTTTACTTCTTCTACTTGATTATTACTTGTTTACGCCCTTGTTAAAAAAGGATTTTCTTTTATTTTCTATGATGAAATAAGCATTCAGTAGTTTCTGAAGACGTGGATAGACAAAATTTCAAGAAATCCTCTTGTTAACAGAGAACATCTACCCTAGTGTAGCTATTATTTAGTTGAAAGAACATGAGCCTATCTAAGAGTTCTGGTCTATTGACTGTGCGTCACTGGCTTTGTGATATGGACGATAATATGCTGCATGATGAGGTTCATTCTTTTGGCTTATAGCTTCATTGATGAGGATGACAATGGCATGTCTAGAATAGGTGGGAATGGAAAGAAGACAAGTATCTTACATCTCAAGTTAGAATTTCAGTGAGGTCTCAAGTTTAATGAAAAAGGTCTCAATTTTCAATGTGATACTGCATGACCTCAACCCTTGATGCAAAGGTAGAATTCCTAAAATTTACTATCAATTTCACTTCTAGAACAAGCAACATGGATCTGTGGTGGAAGTCTCATTCTGTGGATTTAGATGTTTTTGAGGTCACAGGTTCAAATTATGGTTACCATCTATCTAGGAAATTAAACAATATATGAATTTCCTAATATCAAATGTGGTAAGGTTAGATAGTTCCCAAGTAGGATTAGTCAAGGAGTGTGAGTTAGTCTAGTCAACTACAGCTATAAAAAGGTTCTCTCAAACAACGAATATTTTGCAAAAATTTTGATTTTGTGGTCAAAATATTGGACATGATAGAATAATATTTATGTTGATCTTGTTTAAAATAATATTTGTGTTGATTACCACTTGCCACAGCTCATAAGGTTTTGGGTTATCGAAACTTATTATCATGGGGATCCCCAAAGAGACTCTTCCCAGTAGGCTAGATTTTGTTGTTTGAAACTTTATATTCATAGGTGGGGAAAGGAATGAGATCGTTGTGGAGTTGCAGACCAGATCATCAAGCAGTACCTTTTGCTTCCGTCTGAACATAGCTGTTTTCATTCACATGTCAATAGTGAAAAGTATCTTTTCCAGTAATGGAATGCCTATTTCAATTATTCTTGTGGGTTTAGAATGGTTCATGTCTAGTTGTTTTATGATTGGTTATGGCTTTTACTTTGTACAATTTGAAGAACCAGTTAAATTAACAGAGTTTGATCTGTTTTCAGGCTTCTAACTCCTCCTGGAACT

mRNA sequence

TTAGAGAGGCTTGCAGTGGGAGAAGCGAATTTGGATGCGGATTCTTCACCTATTGGGTTGTGCTTGGAAGTGTTGTGGCCGGGGAGCTTCACTGCAGATCTAATTGACTTGGGGGATTTAGACATGAATCGTAGCTTTAGGGCTTTGGAATCGCAAATGCAAGCTCCGGTAAAGCAGCGGCAGCAGCAAGTTGGGGGACTGAGGGCGTCGGTGATGAAAGATAAGGAGGAGGAGCTTGCTTTGTTCTTAGAAATGAGAAAGCGTGAGAAAGAGAGGAATGATCTTCTCTCTAACAACGCGGAAGAGTTCGATGCGCCTTTAGGAACAAAACCAGGAACTTCTCCAATATTTAACATCTCATCAGCGACTCCAGCCCCTACACGCAAGACTGGTGCTGATGATTTTCTTAATTCTGACAATGATAAAAATGATTATGATTGGTAA

Coding sequence (CDS)

TTAGAGAGGCTTGCAGTGGGAGAAGCGAATTTGGATGCGGATTCTTCACCTATTGGGTTGTGCTTGGAAGTGTTGTGGCCGGGGAGCTTCACTGCAGATCTAATTGACTTGGGGGATTTAGACATGAATCGTAGCTTTAGGGCTTTGGAATCGCAAATGCAAGCTCCGGTAAAGCAGCGGCAGCAGCAAGTTGGGGGACTGAGGGCGTCGGTGATGAAAGATAAGGAGGAGGAGCTTGCTTTGTTCTTAGAAATGAGAAAGCGTGAGAAAGAGAGGAATGATCTTCTCTCTAACAACGCGGAAGAGTTCGATGCGCCTTTAGGAACAAAACCAGGAACTTCTCCAATATTTAACATCTCATCAGCGACTCCAGCCCCTACACGCAAGACTGGTGCTGATGATTTTCTTAATTCTGACAATGATAAAAATGATTATGATTGGTAA

Protein sequence

LERLAVGEANLDADSSPIGLCLEVLWPGSFTADLIDLGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW
Homology
[Close]
BLAST of Spg039585 vs. NCBI nr
Match: XP_038885154.1 (endochitinase A [Benincasa hispida])

HSP 1 Score: 208.0 bits (528), Expect = 5.6e-50
Identity = 108/110 (98.18%), Postives = 108/110 (98.18%), Query Frame = 0 

Query: 38  GDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLS 97
           G L MNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLS
Sbjct: 40  GILGMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLS 99

Query: 98  NNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW 148
           NNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW
Sbjct: 100 NNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW 149

[Close]
BLAST of Spg039585 vs. NCBI nr
Match: XP_023551118.1 (flocculation protein FLO11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.1 bits (523), Expect = 2.1e-49
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 37  LGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLL 96
           LGD  MNRSFRALESQMQAPVKQRQQQVGGLRASV KDKEEELALFLEMRKREKERNDLL
Sbjct: 40  LGDFKMNRSFRALESQMQAPVKQRQQQVGGLRASVRKDKEEELALFLEMRKREKERNDLL 99

Query: 97  SNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW 148
           SN+AEEFDAPLGTKPGTSPIFNI+SATPAPTRKTGADDFLNSDNDKNDYDW
Sbjct: 100 SNHAEEFDAPLGTKPGTSPIFNIASATPAPTRKTGADDFLNSDNDKNDYDW 150

[Close]
BLAST of Spg039585 vs. NCBI nr
Match: XP_022939313.1 (flocculation protein FLO11-like [Cucurbita moschata])

HSP 1 Score: 206.1 bits (523), Expect = 2.1e-49
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 37  LGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLL 96
           LGD  MNRSFRALESQMQAPVKQRQQQVGGLRASV KDKEEELALFLEMRKREKERNDLL
Sbjct: 40  LGDFKMNRSFRALESQMQAPVKQRQQQVGGLRASVRKDKEEELALFLEMRKREKERNDLL 99

Query: 97  SNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW 148
           SN+AEEFDAPLGTKPGTSPIFNI+SATPAPTRKTGADDFLNSDNDKNDYDW
Sbjct: 100 SNHAEEFDAPLGTKPGTSPIFNIASATPAPTRKTGADDFLNSDNDKNDYDW 150

[Close]
BLAST of Spg039585 vs. NCBI nr
Match: KAG6578448.1 (hypothetical protein SDJN03_22896, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 204.9 bits (520), Expect = 4.7e-49
Identity = 105/111 (94.59%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 37  LGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLL 96
           LGD  MNRSFRALESQMQAPV+QRQQQVGGLRASV KDKEEELALFLEMRKREKERNDLL
Sbjct: 39  LGDFKMNRSFRALESQMQAPVRQRQQQVGGLRASVRKDKEEELALFLEMRKREKERNDLL 98

Query: 97  SNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW 148
           SN+AEEFDAPLGTKPGTSPIFNI+SATPAPTRKTGADDFLNSDNDKNDYDW
Sbjct: 99  SNHAEEFDAPLGTKPGTSPIFNIASATPAPTRKTGADDFLNSDNDKNDYDW 149

[Close]
BLAST of Spg039585 vs. NCBI nr
Match: KAG7016011.1 (hypothetical protein SDJN02_21115 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 204.9 bits (520), Expect = 4.7e-49
Identity = 105/111 (94.59%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 37  LGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLL 96
           LGD  MNRSFRALESQMQAPV+QRQQQVGGLRASV KDKEEELALFLEMRKREKERNDLL
Sbjct: 40  LGDFKMNRSFRALESQMQAPVRQRQQQVGGLRASVRKDKEEELALFLEMRKREKERNDLL 99

Query: 97  SNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW 148
           SN+AEEFDAPLGTKPGTSPIFNI+SATPAPTRKTGADDFLNSDNDKNDYDW
Sbjct: 100 SNHAEEFDAPLGTKPGTSPIFNIASATPAPTRKTGADDFLNSDNDKNDYDW 150

[Close]
BLAST of Spg039585 vs. ExPASy TrEMBL
Match: A0A6J1FLB1 (flocculation protein FLO11-like OS=Cucurbita moschata OX=3662 GN=LOC111445266 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.0e-49
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 37  LGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLL 96
           LGD  MNRSFRALESQMQAPVKQRQQQVGGLRASV KDKEEELALFLEMRKREKERNDLL
Sbjct: 40  LGDFKMNRSFRALESQMQAPVKQRQQQVGGLRASVRKDKEEELALFLEMRKREKERNDLL 99

Query: 97  SNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW 148
           SN+AEEFDAPLGTKPGTSPIFNI+SATPAPTRKTGADDFLNSDNDKNDYDW
Sbjct: 100 SNHAEEFDAPLGTKPGTSPIFNIASATPAPTRKTGADDFLNSDNDKNDYDW 150

[Close]
BLAST of Spg039585 vs. ExPASy TrEMBL
Match: A0A6J1BXA9 (mucin-5AC isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006344 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 6.7e-49
Identity = 104/106 (98.11%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 42  MNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAE 101
           MNRSFRALESQMQAPV+QRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAE
Sbjct: 1   MNRSFRALESQMQAPVRQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAE 60

Query: 102 EFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW 148
           EFDAPLGTKPGTSPIFNI+SATPAPTRKTGADDFLNSDNDKNDYDW
Sbjct: 61  EFDAPLGTKPGTSPIFNIASATPAPTRKTGADDFLNSDNDKNDYDW 106

[Close]
BLAST of Spg039585 vs. ExPASy TrEMBL
Match: A0A6J1JXM8 (flocculation protein FLO11-like OS=Cucurbita maxima OX=3661 GN=LOC111489236 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.5e-48
Identity = 104/111 (93.69%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 37  LGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLL 96
           LGD  MNRSFRA ESQMQAPVKQRQQQ GGLRASV KDKEEELALFLEMRKREKERNDLL
Sbjct: 40  LGDFKMNRSFRASESQMQAPVKQRQQQAGGLRASVRKDKEEELALFLEMRKREKERNDLL 99

Query: 97  SNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW 148
           SN+AEEFDAPLGTKPGTSPIFNI+SATPAPTRKTGADDFLNSDNDKNDYDW
Sbjct: 100 SNHAEEFDAPLGTKPGTSPIFNIASATPAPTRKTGADDFLNSDNDKNDYDW 150

[Close]
BLAST of Spg039585 vs. ExPASy TrEMBL
Match: A0A6J1JP82 (zonadhesin OS=Cucurbita maxima OX=3661 GN=LOC111487104 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.6e-47
Identity = 102/106 (96.23%), Postives = 103/106 (97.17%), Query Frame = 0 

Query: 42  MNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAE 101
           MNRSFRALESQ+QAP K RQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNN E
Sbjct: 1   MNRSFRALESQIQAPAKPRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNVE 60

Query: 102 EFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW 148
           EFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW
Sbjct: 61  EFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW 106

[Close]
BLAST of Spg039585 vs. ExPASy TrEMBL
Match: A0A1S3B3G3 (endochitinase A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485566 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.8e-47
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 42  MNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAE 101
           MNRSFRALESQMQAPVKQR QQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAE
Sbjct: 1   MNRSFRALESQMQAPVKQR-QQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAE 60

Query: 102 EFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW 148
           EFDAPL TKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW
Sbjct: 61  EFDAPLATKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW 105

[Close]
BLAST of Spg039585 vs. TAIR 10
Match: AT2G40070.1 (BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 117.9 bits (294), Expect = 7.1e-27
Identity = 66/107 (61.68%), Postives = 85/107 (79.44%), Query Frame = 0 

Query: 42  MNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKER-NDLLSNNA 101
           MNRSFRA ES +    ++++QQ   LRAS+M +K+EEL+LFLEMR+REKE+ N LL+NN 
Sbjct: 1   MNRSFRAKESLLLDSAERQRQQ---LRASMMAEKDEELSLFLEMRRREKEQDNLLLNNNP 60

Query: 102 EEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW 148
           +EF+ PLG+K GTSP+FNISS  P P+RK   DDFLNS+ DKNDY+W
Sbjct: 61  DEFETPLGSKHGTSPVFNISSGAP-PSRKAAPDDFLNSEGDKNDYEW 103

[Close]
BLAST of Spg039585 vs. TAIR 10
Match: AT2G40070.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 108635 Blast hits to 60786 proteins in 2176 species: Archae - 287; Bacteria - 15142; Metazoa - 39415; Fungi - 26849; Plants - 4416; Viruses - 2864; Other Eukaryotes - 19662 (source: NCBI BLink). )

HSP 1 Score: 82.0 bits (201), Expect = 4.3e-16
Identity = 42/64 (65.62%), Postives = 52/64 (81.25%), Query Frame = 0 

Query: 85  MRKREKER-NDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKN 144
           MR+REKE+ N LL+NN +EF+ PLG+K GTSP+FNISS  P P+RK   DDFLNS+ DKN
Sbjct: 1   MRRREKEQDNLLLNNNPDEFETPLGSKHGTSPVFNISSGAP-PSRKAAPDDFLNSEGDKN 60

Query: 145 DYDW 148
           DY+W
Sbjct: 61  DYEW 63

[Close]
BLAST of Spg039585 vs. TAIR 10
Match: AT3G09000.1 (proline-rich family protein )

HSP 1 Score: 52.4 bits (124), Expect = 3.7e-07
Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 0 

Query: 74  DKEEELALFLEMRKREKER--------NDLLSNNAEEFDAPLGTKPGTSPIFNISSATPA 133
           D++EEL+LFLEMR+REKE         +D +S NA    A      G S     +S+   
Sbjct: 5   DRDEELSLFLEMRRREKEHRADSLLTGSDNVSINATLTAAAAAALSGVS---ETASSQRY 64

Query: 134 PTRKTGADDFLNSDNDKNDYDW 148
           P R+T A++FL S+N+K+DYDW
Sbjct: 65  PLRRTAAENFLYSENEKSDYDW 83

[Close]
BLAST of Spg039585 vs. TAIR 10
Match: AT2G38160.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.2); Has 972 Blast hits to 731 proteins in 211 species: Archae - 0; Bacteria - 236; Metazoa - 194; Fungi - 201; Plants - 218; Viruses - 32; Other Eukaryotes - 91 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 8.4e-04
Identity = 28/78 (35.90%), Postives = 43/78 (55.13%), Query Frame = 0 

Query: 71  VMKDKEEELALFLEMRKREKERN-DLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRK 130
           V++D +EEL+LFLEMR+REK +    LS           TK        +   +    R+
Sbjct: 6   VVRDGDEELSLFLEMRRREKLQGVSSLSQPGANSVEKTSTKS-----LELLKTSCVKLRR 65

Query: 131 TGADDFLNSDNDKNDYDW 148
           +  + FL+S+NDK+DY+W
Sbjct: 66  SSVEKFLDSENDKSDYEW 78

[Close]
BLAST of Spg039585 vs. TAIR 10
Match: AT2G38160.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.2). )

HSP 1 Score: 41.2 bits (95), Expect = 8.4e-04
Identity = 28/78 (35.90%), Postives = 43/78 (55.13%), Query Frame = 0 

Query: 71  VMKDKEEELALFLEMRKREKERN-DLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRK 130
           V++D +EEL+LFLEMR+REK +    LS           TK        +   +    R+
Sbjct: 6   VVRDGDEELSLFLEMRRREKLQGVSSLSQPGANSVEKTSTKS-----LELLKTSCVKLRR 65

Query: 131 TGADDFLNSDNDKNDYDW 148
           +  + FL+S+NDK+DY+W
Sbjct: 66  SSVEKFLDSENDKSDYEW 78

The following BLAST results are available for this feature:
BLAST of Spg039585 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038885154.15.6e-5098.18endochitinase A [Benincasa hispida][more]
XP_023551118.12.1e-4995.50flocculation protein FLO11-like [Cucurbita pepo subsp. pepo][more]
XP_022939313.12.1e-4995.50flocculation protein FLO11-like [Cucurbita moschata][more]
KAG6578448.14.7e-4994.59hypothetical protein SDJN03_22896, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7016011.14.7e-4994.59hypothetical protein SDJN02_21115 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Spg039585 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg039585 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FLB11.0e-4995.50flocculation protein FLO11-like OS=Cucurbita moschata OX=3662 GN=LOC111445266 PE... [more]
A0A6J1BXA96.7e-4998.11mucin-5AC isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006344 PE=4 SV=1[more]
A0A6J1JXM81.5e-4893.69flocculation protein FLO11-like OS=Cucurbita maxima OX=3661 GN=LOC111489236 PE=4... [more]
A0A6J1JP821.6e-4796.23zonadhesin OS=Cucurbita maxima OX=3661 GN=LOC111487104 PE=4 SV=1[more]
A0A1S3B3G34.8e-4798.11endochitinase A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485566 PE=4 SV=1[more]
BLAST of Spg039585 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G40070.17.1e-2761.68BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT... [more]
AT2G40070.24.3e-1665.63FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT3G09000.13.7e-0742.68proline-rich family protein [more]
AT2G38160.18.4e-0435.90unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G38160.28.4e-0435.90unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..147
NoneNo IPR availablePANTHERPTHR31949:SF29PROTEIN, PUTATIVE-RELATEDcoord: 42..147
NoneNo IPR availablePANTHERPTHR31949GASTRIC MUCIN-LIKE PROTEINcoord: 42..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg039585.1Spg039585.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043622 cortical microtubule organization
cellular_component GO:0055028 cortical microtubule
cellular_component GO:0016021 integral component of membrane