Spg037045 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGTATGAGTGTGCTCCTCCTGTCGACTTTGATGTTATTCATCATTTGGAACGTCAACTAGATTCGCTCCTTCTTGAAGAAGAGATTTATTGGAAACAATGTTCGAGGGAAAATTGGCTCAAGTGGGGTGATCGTAACACAAAGTGGTTCCACCAAAAAGCAACATTAAGACGTCAGAGGAATTGGATCCTTGGAGTTGAAGATGCCCAGGGAATTTGGCATTCGGAGAAAGCGGCTGTTCACAATACTTTCGTCAACTACTTTACAACTATATTTTCCTCATGTAACCCTGTGTAGGGGGATTTTGATGAGGTTATTAATGTTGTTCCTTGAAAAGTCACGGAGGCGATGAATCAGATGCTCATGGCTCCCTATTCTAAGGAGGAAGTGTATGCAGCAATCAGAAGTTTTCATCCGACGAAGGCCCTGGGGCCAGATGGCTTTCCTGCCCTCTTTTATCAAAAATATTGGGAGATAGTGGGGAATGCGACGGTGGCAAATTGTCTGGCCATCCTAAATTCGGAAGCATCGGTGCACGAGTGGAATCACACAAATATTGTGCTCATCCCAAAGATTTTCCATGTAAGGTTAGTATCTGATTATCGCCCAATTAGCTTGTGTAATGTATCCTACAAAATTGTTACTAAAGTCATAGCTAATTAATAGGCTGAAGCGTGTGTTGGATGATATTATAGATGAGTGCCAGTCAGCTTTTATCCCTGGTAGATCTATTTCGGATAATATGATTTTAGCACATGAAACTTTACATTATCTCCAAAATAGGCGTAAAGGAAAAATCGAATATGCTGCTTTAAAGCTTGATATGAGTAAAACTTATGATAGGGTGGAGTGGTCTTATCTGTGCCAAATTATGGCTAAGTTGGGTTTTCATGATGATTGGATCAAACTGGTTATGAAATGTATATCGATAACCACATTCTCCATTCTAATGAATGGGGAATCCTTTGGGTTCATTCAGCCATACAGGGGAATAAGGCAGGGGGATCCTCTATCTCCTTATCTATTCTTAATTTGTACGGAAGGACTTTCTGCATTGTTGGATTCAGCAAGGACAAAACATTTGGCCGAGATATCAATTGCGCGAGCTTGTCCCAAAATATCCCATCTATTCTTTATCGATGATAGTTTGGTCTTTCTTAAAGCAGCGGCTGCAGAATTTGGGCATTTCAAGGCTATTTTAAAAATTTATGAGAGGGCGTCCGGTCAATGTGTATGTTCATAAATCGACGGTGTTTTTTTCGAAAAATGTTCCTGTTGATTCTAGGCAGTATCTTAGCACTGTAGTATCTATGAATGCATCTGAATCCGTGGGGGTGTATCTAGAACTTCCTTAAACCTTTCACCGAGGAAAAACACGAGATTTTCAATTTTTACTTGATAAAGTGTGGTTTCTACAACAAGGCTAGAAGAGTCAACTTTTTTCCCAAGGTGGTAATGAAGTGTTGATAAAAAGCATCATTCAAGCCATTCCTACATATGTGATGGGTTGTTTTAGGATCCCCAAAGGGATCTTATACAAAATTTCGGCCCTTTGTGCCAAATTCTGGTGGGGTTCCCATGGGGACAAGCGTAAGATGCATCGGAGACATTGGGAGGAACTCTGCAAACCAAAGGAGCTTGGTGGTTTGAATTTTCGTGATCTTGTTAATTTTAACCAAGCTATGCTTGCAAAACAGGCGTGGAGGGTTCTGACTAATACGCATCTCACAATTTCTAGAGTTTTGCGTGGGAGATATTTCCCGAACTCTTCTGTCTTAGAAGCGTCCCATCACTCTTCTTCCTCTTACTTTTGGAAGGGCTTTGTGTGGGGGCGGGATTTGATGAAGGTAGGAATAAGGAAAAATCTAGGGAATGGACAATCGATTAAGTTGTTCAGCGACCCATGGATTCCCAGGCCTACCACTTTCCGAGTGGTTTCACCTCTGCATGTATCTATGGAGAATACTGTTGTGGTGGATTTCTTCACTCCATCGCATCAATGGGATATTGTGAAACTAAATCAGTTTCTGGTTAGGGAGGATGTAGAGGTGATCCAAAGTCTTCCGATTAGTAGCTCAGCCCCAGATAAATAGATATGGCACTATGATAGCAGAGGAGAGTATTCTGTTAAGAGTGGGTACAAACTTAGCATGATGATGGATCGTCAGGCTTCCTTGTCGGAAGTAGGAAGAGAGACGAGTTGGTGGAACAAAGTTTGGAAGATGAGGGTGCCTAGTAAGGTGAAGGCTTTTGTTTGGCAATCCTATCACAACTCAATTCCTACTATGGACAATCTTCAAAATCACCATGTTCCAGTTGAGGGACTCTGCCTAGTCTGTAAAGAAGAGACGGAGACCTCAGATCATGCACTGTTTCAATGCCACAGAGCTTAG ATGTCGTATGAGTGTGCTCCTCCTGTCGACTTTGATGTTATTCATCATTTGGAACGTCAACTAGATTCGCTCCTTCTTGAAGAAGAGATTTATTGGAAACAATGTTCGAGGGAAAATTGGCTCAAGTGGGGTGATCGTAACACAAAATATTTCCCGAACTCTTCTGTCTTAGAAGCGTCCCATCACTCTTCTTCCTCTTACTTTTGGAAGGGCTTTGTGTGGGGGCGGGATTTGATGAAGGTAGGAATAAGGAAAAATCTAGGGAATGGACAATCGATTAAGTTGTTCAGCGACCCATGGATTCCCAGGCCTACCACTTTCCGAGTGGTTTCACCTCTGCATGTATCTATGGAGAATACTGTTGTGGTGGATTTCTTCACTCCATCGCATCAATGGGATATTGTGAAACTAAATCAGTTTCTGGTTAGGGAGGATGTAGAGAGTGGGTACAAACTTAGCATGATGATGGATCGTCAGGCTTCCTTGTCGGAAGTAGGAAGAGAGACGAGTTGGTGGAACAAAGTTTGGAAGATGAGGGTGCCTAGTAAGGTGAAGGCTTTTGTTTGGCAATCCTATCACAACTCAATTCCTACTATGGACAATCTTCAAAATCACCATGTTCCAGTTGAGGGACTCTGCCTAGTCTGTAAAGAAGAGACGGAGACCTCAGATCATGCACTGTTTCAATGCCACAGAGCTTAG ATGTCGTATGAGTGTGCTCCTCCTGTCGACTTTGATGTTATTCATCATTTGGAACGTCAACTAGATTCGCTCCTTCTTGAAGAAGAGATTTATTGGAAACAATGTTCGAGGGAAAATTGGCTCAAGTGGGGTGATCGTAACACAAAATATTTCCCGAACTCTTCTGTCTTAGAAGCGTCCCATCACTCTTCTTCCTCTTACTTTTGGAAGGGCTTTGTGTGGGGGCGGGATTTGATGAAGGTAGGAATAAGGAAAAATCTAGGGAATGGACAATCGATTAAGTTGTTCAGCGACCCATGGATTCCCAGGCCTACCACTTTCCGAGTGGTTTCACCTCTGCATGTATCTATGGAGAATACTGTTGTGGTGGATTTCTTCACTCCATCGCATCAATGGGATATTGTGAAACTAAATCAGTTTCTGGTTAGGGAGGATGTAGAGAGTGGGTACAAACTTAGCATGATGATGGATCGTCAGGCTTCCTTGTCGGAAGTAGGAAGAGAGACGAGTTGGTGGAACAAAGTTTGGAAGATGAGGGTGCCTAGTAAGGTGAAGGCTTTTGTTTGGCAATCCTATCACAACTCAATTCCTACTATGGACAATCTTCAAAATCACCATGTTCCAGTTGAGGGACTCTGCCTAGTCTGTAAAGAAGAGACGGAGACCTCAGATCATGCACTGTTTCAATGCCACAGAGCTTAG MSYECAPPVDFDVIHHLERQLDSLLLEEEIYWKQCSRENWLKWGDRNTKYFPNSSVLEASHHSSSSYFWKGFVWGRDLMKVGIRKNLGNGQSIKLFSDPWIPRPTTFRVVSPLHVSMENTVVVDFFTPSHQWDIVKLNQFLVREDVESGYKLSMMMDRQASLSEVGRETSWWNKVWKMRVPSKVKAFVWQSYHNSIPTMDNLQNHHVPVEGLCLVCKEETETSDHALFQCHRA Homology
BLAST of Spg037045 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 165.6 bits (418), Expect = 5.0e-37 Identity = 84/231 (36.36%), Postives = 120/231 (51.95%), Query Frame = 0
BLAST of Spg037045 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis]) HSP 1 Score: 140.6 bits (353), Expect = 1.7e-29 Identity = 75/231 (32.47%), Postives = 115/231 (49.78%), Query Frame = 0
BLAST of Spg037045 vs. NCBI nr
Match: PKA49974.1 (Putative ribonuclease H protein [Apostasia shenzhenica]) HSP 1 Score: 139.4 bits (350), Expect = 3.9e-29 Identity = 66/228 (28.95%), Postives = 110/228 (48.25%), Query Frame = 0
BLAST of Spg037045 vs. NCBI nr
Match: XP_030509050.1 (uncharacterized protein LOC115723712 [Cannabis sativa]) HSP 1 Score: 136.3 bits (342), Expect = 3.3e-28 Identity = 74/217 (34.10%), Postives = 109/217 (50.23%), Query Frame = 0
BLAST of Spg037045 vs. NCBI nr
Match: XP_030486845.1 (uncharacterized protein LOC115703751 [Cannabis sativa]) HSP 1 Score: 131.7 bits (330), Expect = 8.1e-27 Identity = 73/257 (28.40%), Postives = 122/257 (47.47%), Query Frame = 0
BLAST of Spg037045 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10 Identity = 50/194 (25.77%), Postives = 84/194 (43.30%), Query Frame = 0
BLAST of Spg037045 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 8.1e-06 Identity = 20/54 (37.04%), Postives = 36/54 (66.67%), Query Frame = 0
BLAST of Spg037045 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 2.4e-37 Identity = 84/231 (36.36%), Postives = 120/231 (51.95%), Query Frame = 0
BLAST of Spg037045 vs. ExPASy TrEMBL
Match: A0A803NZC3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 4.0e-32 Identity = 75/208 (36.06%), Postives = 113/208 (54.33%), Query Frame = 0
BLAST of Spg037045 vs. ExPASy TrEMBL
Match: A0A2I0A354 (Ribonuclease H protein OS=Apostasia shenzhenica OX=1088818 GN=AXF42_Ash017513 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 1.9e-29 Identity = 66/228 (28.95%), Postives = 110/228 (48.25%), Query Frame = 0
BLAST of Spg037045 vs. ExPASy TrEMBL
Match: A0A803Q6Z2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 1.6e-28 Identity = 74/217 (34.10%), Postives = 109/217 (50.23%), Query Frame = 0
BLAST of Spg037045 vs. ExPASy TrEMBL
Match: A0A803NN93 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 7.9e-28 Identity = 71/218 (32.57%), Postives = 100/218 (45.87%), Query Frame = 0
BLAST of Spg037045 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 77.0 bits (188), Expect = 2.2e-14 Identity = 57/243 (23.46%), Postives = 101/243 (41.56%), Query Frame = 0
BLAST of Spg037045 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 66.6 bits (161), Expect = 3.0e-11 Identity = 50/218 (22.94%), Postives = 90/218 (41.28%), Query Frame = 0
BLAST of Spg037045 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 54.3 bits (129), Expect = 1.5e-07 Identity = 22/60 (36.67%), Postives = 33/60 (55.00%), Query Frame = 0
BLAST of Spg037045 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 52.4 bits (124), Expect = 5.8e-07 Identity = 20/54 (37.04%), Postives = 36/54 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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