Spg037045 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg037045
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H protein
Locationscaffold6: 28376711 .. 28379106 (+)
RNA-Seq ExpressionSpg037045
SyntenySpg037045
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTATGAGTGTGCTCCTCCTGTCGACTTTGATGTTATTCATCATTTGGAACGTCAACTAGATTCGCTCCTTCTTGAAGAAGAGATTTATTGGAAACAATGTTCGAGGGAAAATTGGCTCAAGTGGGGTGATCGTAACACAAAGTGGTTCCACCAAAAAGCAACATTAAGACGTCAGAGGAATTGGATCCTTGGAGTTGAAGATGCCCAGGGAATTTGGCATTCGGAGAAAGCGGCTGTTCACAATACTTTCGTCAACTACTTTACAACTATATTTTCCTCATGTAACCCTGTGTAGGGGGATTTTGATGAGGTTATTAATGTTGTTCCTTGAAAAGTCACGGAGGCGATGAATCAGATGCTCATGGCTCCCTATTCTAAGGAGGAAGTGTATGCAGCAATCAGAAGTTTTCATCCGACGAAGGCCCTGGGGCCAGATGGCTTTCCTGCCCTCTTTTATCAAAAATATTGGGAGATAGTGGGGAATGCGACGGTGGCAAATTGTCTGGCCATCCTAAATTCGGAAGCATCGGTGCACGAGTGGAATCACACAAATATTGTGCTCATCCCAAAGATTTTCCATGTAAGGTTAGTATCTGATTATCGCCCAATTAGCTTGTGTAATGTATCCTACAAAATTGTTACTAAAGTCATAGCTAATTAATAGGCTGAAGCGTGTGTTGGATGATATTATAGATGAGTGCCAGTCAGCTTTTATCCCTGGTAGATCTATTTCGGATAATATGATTTTAGCACATGAAACTTTACATTATCTCCAAAATAGGCGTAAAGGAAAAATCGAATATGCTGCTTTAAAGCTTGATATGAGTAAAACTTATGATAGGGTGGAGTGGTCTTATCTGTGCCAAATTATGGCTAAGTTGGGTTTTCATGATGATTGGATCAAACTGGTTATGAAATGTATATCGATAACCACATTCTCCATTCTAATGAATGGGGAATCCTTTGGGTTCATTCAGCCATACAGGGGAATAAGGCAGGGGGATCCTCTATCTCCTTATCTATTCTTAATTTGTACGGAAGGACTTTCTGCATTGTTGGATTCAGCAAGGACAAAACATTTGGCCGAGATATCAATTGCGCGAGCTTGTCCCAAAATATCCCATCTATTCTTTATCGATGATAGTTTGGTCTTTCTTAAAGCAGCGGCTGCAGAATTTGGGCATTTCAAGGCTATTTTAAAAATTTATGAGAGGGCGTCCGGTCAATGTGTATGTTCATAAATCGACGGTGTTTTTTTCGAAAAATGTTCCTGTTGATTCTAGGCAGTATCTTAGCACTGTAGTATCTATGAATGCATCTGAATCCGTGGGGGTGTATCTAGAACTTCCTTAAACCTTTCACCGAGGAAAAACACGAGATTTTCAATTTTTACTTGATAAAGTGTGGTTTCTACAACAAGGCTAGAAGAGTCAACTTTTTTCCCAAGGTGGTAATGAAGTGTTGATAAAAAGCATCATTCAAGCCATTCCTACATATGTGATGGGTTGTTTTAGGATCCCCAAAGGGATCTTATACAAAATTTCGGCCCTTTGTGCCAAATTCTGGTGGGGTTCCCATGGGGACAAGCGTAAGATGCATCGGAGACATTGGGAGGAACTCTGCAAACCAAAGGAGCTTGGTGGTTTGAATTTTCGTGATCTTGTTAATTTTAACCAAGCTATGCTTGCAAAACAGGCGTGGAGGGTTCTGACTAATACGCATCTCACAATTTCTAGAGTTTTGCGTGGGAGATATTTCCCGAACTCTTCTGTCTTAGAAGCGTCCCATCACTCTTCTTCCTCTTACTTTTGGAAGGGCTTTGTGTGGGGGCGGGATTTGATGAAGGTAGGAATAAGGAAAAATCTAGGGAATGGACAATCGATTAAGTTGTTCAGCGACCCATGGATTCCCAGGCCTACCACTTTCCGAGTGGTTTCACCTCTGCATGTATCTATGGAGAATACTGTTGTGGTGGATTTCTTCACTCCATCGCATCAATGGGATATTGTGAAACTAAATCAGTTTCTGGTTAGGGAGGATGTAGAGGTGATCCAAAGTCTTCCGATTAGTAGCTCAGCCCCAGATAAATAGATATGGCACTATGATAGCAGAGGAGAGTATTCTGTTAAGAGTGGGTACAAACTTAGCATGATGATGGATCGTCAGGCTTCCTTGTCGGAAGTAGGAAGAGAGACGAGTTGGTGGAACAAAGTTTGGAAGATGAGGGTGCCTAGTAAGGTGAAGGCTTTTGTTTGGCAATCCTATCACAACTCAATTCCTACTATGGACAATCTTCAAAATCACCATGTTCCAGTTGAGGGACTCTGCCTAGTCTGTAAAGAAGAGACGGAGACCTCAGATCATGCACTGTTTCAATGCCACAGAGCTTAG

mRNA sequence

ATGTCGTATGAGTGTGCTCCTCCTGTCGACTTTGATGTTATTCATCATTTGGAACGTCAACTAGATTCGCTCCTTCTTGAAGAAGAGATTTATTGGAAACAATGTTCGAGGGAAAATTGGCTCAAGTGGGGTGATCGTAACACAAAATATTTCCCGAACTCTTCTGTCTTAGAAGCGTCCCATCACTCTTCTTCCTCTTACTTTTGGAAGGGCTTTGTGTGGGGGCGGGATTTGATGAAGGTAGGAATAAGGAAAAATCTAGGGAATGGACAATCGATTAAGTTGTTCAGCGACCCATGGATTCCCAGGCCTACCACTTTCCGAGTGGTTTCACCTCTGCATGTATCTATGGAGAATACTGTTGTGGTGGATTTCTTCACTCCATCGCATCAATGGGATATTGTGAAACTAAATCAGTTTCTGGTTAGGGAGGATGTAGAGAGTGGGTACAAACTTAGCATGATGATGGATCGTCAGGCTTCCTTGTCGGAAGTAGGAAGAGAGACGAGTTGGTGGAACAAAGTTTGGAAGATGAGGGTGCCTAGTAAGGTGAAGGCTTTTGTTTGGCAATCCTATCACAACTCAATTCCTACTATGGACAATCTTCAAAATCACCATGTTCCAGTTGAGGGACTCTGCCTAGTCTGTAAAGAAGAGACGGAGACCTCAGATCATGCACTGTTTCAATGCCACAGAGCTTAG

Coding sequence (CDS)

ATGTCGTATGAGTGTGCTCCTCCTGTCGACTTTGATGTTATTCATCATTTGGAACGTCAACTAGATTCGCTCCTTCTTGAAGAAGAGATTTATTGGAAACAATGTTCGAGGGAAAATTGGCTCAAGTGGGGTGATCGTAACACAAAATATTTCCCGAACTCTTCTGTCTTAGAAGCGTCCCATCACTCTTCTTCCTCTTACTTTTGGAAGGGCTTTGTGTGGGGGCGGGATTTGATGAAGGTAGGAATAAGGAAAAATCTAGGGAATGGACAATCGATTAAGTTGTTCAGCGACCCATGGATTCCCAGGCCTACCACTTTCCGAGTGGTTTCACCTCTGCATGTATCTATGGAGAATACTGTTGTGGTGGATTTCTTCACTCCATCGCATCAATGGGATATTGTGAAACTAAATCAGTTTCTGGTTAGGGAGGATGTAGAGAGTGGGTACAAACTTAGCATGATGATGGATCGTCAGGCTTCCTTGTCGGAAGTAGGAAGAGAGACGAGTTGGTGGAACAAAGTTTGGAAGATGAGGGTGCCTAGTAAGGTGAAGGCTTTTGTTTGGCAATCCTATCACAACTCAATTCCTACTATGGACAATCTTCAAAATCACCATGTTCCAGTTGAGGGACTCTGCCTAGTCTGTAAAGAAGAGACGGAGACCTCAGATCATGCACTGTTTCAATGCCACAGAGCTTAG

Protein sequence

MSYECAPPVDFDVIHHLERQLDSLLLEEEIYWKQCSRENWLKWGDRNTKYFPNSSVLEASHHSSSSYFWKGFVWGRDLMKVGIRKNLGNGQSIKLFSDPWIPRPTTFRVVSPLHVSMENTVVVDFFTPSHQWDIVKLNQFLVREDVESGYKLSMMMDRQASLSEVGRETSWWNKVWKMRVPSKVKAFVWQSYHNSIPTMDNLQNHHVPVEGLCLVCKEETETSDHALFQCHRA
Homology
BLAST of Spg037045 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 165.6 bits (418), Expect = 5.0e-37
Identity = 84/231 (36.36%), Postives = 120/231 (51.95%), Query Frame = 0

Query: 32   WKQCSRENWLKWGDRNTKYFPNSSVLEASHHSSSSYFWKGFVWGRDLMKVGIRKNLGNGQ 91
            W+     N L       KYF ++S+L+AS++S SSYFWKGF+WGRDL+  G+R  +GNG 
Sbjct: 964  WRFLQHPNLLVSKVLKHKYFKDTSLLQASNNSKSSYFWKGFLWGRDLLVKGLRLRVGNGS 1023

Query: 92   SIKLFSDPWIPRPTTFRVVSPLHVSMENTVVVDFFTPSHQWDIVKLNQFLVRED------ 151
            +IK FSDPW+PRPTTF+ +   + +++ T V  F T    WD+  ++     ED      
Sbjct: 1024 TIKAFSDPWLPRPTTFKPLRFNNGALD-TTVASFITADGNWDVTSISHSFCNEDRDLILS 1083

Query: 152  -----------------------VESGYKLSMMMDRQASLSEVGRETSWWNKVWKMRVPS 211
                                   V SGYKL M +   A+ +      + WN +WK+ VP+
Sbjct: 1084 MPISSYNLQDSWLWHYDKRGNYSVRSGYKLYMHLKCNATSASTNYRGTQWNSIWKLTVPT 1143

Query: 212  KVKAFVWQSYHNSIPTMDNLQNHHVPVEGLCLVCKEETETSDHALFQCHRA 234
            K+K F+W+S H  IPT  NL    +     C +C +  E+  HA F C RA
Sbjct: 1144 KIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESIIHAFFHCKRA 1193

BLAST of Spg037045 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])

HSP 1 Score: 140.6 bits (353), Expect = 1.7e-29
Identity = 75/231 (32.47%), Postives = 115/231 (49.78%), Query Frame = 0

Query: 32   WKQCSRENWLKWGDRNTKYFPNSSVLEASHHSSSSYFWKGFVWGRDLMKVGIRKNLGNGQ 91
            W+     N L       +YF NSS L A   +++SY W+  +WGR ++K G+R  +GNG+
Sbjct: 906  WRLLQYPNSLVSRVLQARYFRNSSFLCAKAGANASYIWRSIMWGRQVIKKGMRWRIGNGK 965

Query: 92   SIKLFSDPWIPRPTTFRVVSPLHVSMENTVVVDFFTPSHQWDIVKLNQFLVRED------ 151
             I +FSD W+PRP TFR + PL + + ++VV D     +QWD +KL Q  +  D      
Sbjct: 966  KIAIFSDNWLPRPETFRPIFPLSLPV-SSVVADLIKADNQWDEIKLRQHFLDVDTAEILK 1025

Query: 152  -----------------------VESGYKLSMMMDRQASLSEVGRETSWWNKVWKMRVPS 211
                                   V+SGY+L++      S S       +W+ +W + +P 
Sbjct: 1026 IPLPAEKAEDEVLWHYDKRGNYSVKSGYQLALRSKFPDSTSCTEASHKYWSALWTLELPE 1085

Query: 212  KVKAFVWQSYHNSIPTMDNLQNHHVPVEGLCLVCKEETETSDHALFQCHRA 234
            K+K F+W++ +N +P+ +NL    V  E  C  CK   ET  HAL +C  A
Sbjct: 1086 KLKIFMWRASNNLLPSAENLWKRKVVEEPTCKRCKLSVETISHALLECKAA 1135

BLAST of Spg037045 vs. NCBI nr
Match: PKA49974.1 (Putative ribonuclease H protein [Apostasia shenzhenica])

HSP 1 Score: 139.4 bits (350), Expect = 3.9e-29
Identity = 66/228 (28.95%), Postives = 110/228 (48.25%), Query Frame = 0

Query: 32  WKQCSRENWLKWGDRNTKYFPNSSVLEASHHSSSSYFWKGFVWGRDLMKVGIRKNLGNGQ 91
           W+  +  N L       KYF N   L A    +SSY W+  +WGRDL+K+G+R  +GNG 
Sbjct: 295 WRIITHSNSLMARVLKAKYFHNCDFLMAQASPNSSYIWRSILWGRDLLKLGLRWRIGNGN 354

Query: 92  SIKLFSDPWIPRPTTFRVVSPLHVSMENTVVVDFFTPSHQWDIVKLNQFLVRED------ 151
           S+++F DPW+PRP +F+ ++  + ++  T +V+  T    W+  K+N  L   D      
Sbjct: 355 SVRVFGDPWLPRPISFQAITSPNPNLAATRIVELLTEDGSWNWEKINSILWSIDYHLILE 414

Query: 152 -----------------------VESGYKLSMMMDRQASLSEVGRETSWWNKVWKMRVPS 211
                                  V+SGY  +   +   + S  G    WW K+W  ++P+
Sbjct: 415 MPPCSTKFDDALIWHWDKKGSYSVKSGYVTTTQGESNVASSSNGGFNLWWKKLWSCKIPN 474

Query: 212 KVKAFVWQSYHNSIPTMDNLQNHHVPVEGLCLVCKEETETSDHALFQC 231
           K+K   W+++H+++ T  +L    +    +C  C E+ E   HAL+ C
Sbjct: 475 KLKTHAWRAFHSALLTRSSLAKRGILSNSICPCCMEDIECETHALWLC 522

BLAST of Spg037045 vs. NCBI nr
Match: XP_030509050.1 (uncharacterized protein LOC115723712 [Cannabis sativa])

HSP 1 Score: 136.3 bits (342), Expect = 3.3e-28
Identity = 74/217 (34.10%), Postives = 109/217 (50.23%), Query Frame = 0

Query: 48   TKYFPNSSVLEASHHSSSSYFWKGFVWGRDLMKVGIRKNLGNGQSIKLFSDPWIPRPTTF 107
            ++YF     LEA+  +  S  WK  VWG++L+  G+R  +G+G  +   S PWIP P+ F
Sbjct: 900  SRYFATGVFLEATAGAQPSLTWKSIVWGKELLLKGLRWRIGSGADVNCVSQPWIPGPSNF 959

Query: 108  RVVSPLHVSMENTV-VVDFFTPSHQWDIVKLNQFLVREDVE------------------- 167
            + +  L +S +  V V DF T S QWD+ KL QF    DV+                   
Sbjct: 960  KPL--LFLSPDRDVKVADFITHSRQWDVPKLQQFFTPPDVDRILSIPLSLFPCEDVLLWH 1019

Query: 168  ----------SGYKL-SMMMDRQASLSEVGRETSWWNKVWKMRVPSKVKAFVWQSYHNSI 227
                      SGYKL S + D Q + S      +WW   W +++PSK++ F W++YH ++
Sbjct: 1020 YSSAGFYTVKSGYKLASDVPDSQPNSSHT--TETWWQYFWGLKLPSKIRIFAWRAYHEAL 1079

Query: 228  PTMDNLQNHHVPVEGLCLVCKEETETSDHALFQCHRA 234
            PT   LQ  H+     C +C+   ET +HA F C+RA
Sbjct: 1080 PTAAILQYRHISSSPQCPLCQVHLETINHAFFWCNRA 1112

BLAST of Spg037045 vs. NCBI nr
Match: XP_030486845.1 (uncharacterized protein LOC115703751 [Cannabis sativa])

HSP 1 Score: 131.7 bits (330), Expect = 8.1e-27
Identity = 73/257 (28.40%), Postives = 122/257 (47.47%), Query Frame = 0

Query: 5    CAPPVDFDVIHHLERQLDSLLLEEEIYWKQCSRENWLKWGDRNTKYFPNSSVLEASHHSS 64
            CAP V+  +        +  LL ++  W+  S  + L       +Y+ +SS L+A H S 
Sbjct: 857  CAPKVEGGLGFKSFIHFNQALLVKQA-WRIFSNPSSLLSRILKARYYSHSSFLDAGHGSY 916

Query: 65   SSYFWKGFVWGRDLMKVGIRKNLGNGQSIKLFSDPWIPRPTTFRVVSPLHVSMENTVVVD 124
             S  W+G  WG+DL+  G+R  +G+GQSI   SDPW+P  T FR +    +  ++  V  
Sbjct: 917  PSLTWQGIHWGKDLLSKGLRWKVGDGQSILCKSDPWLPGVTNFRPLVLAGID-DHIKVSS 976

Query: 125  FFTPSHQWDIVKLNQFLVREDVE-----------------------------SGYKLSMM 184
              T    W++  LN + +  DVE                             SGY ++  
Sbjct: 977  LITAERYWNLNLLNSYFIPSDVERILSIPLTLTPCSDALIWHHEHNGCYTVKSGYFMATN 1036

Query: 185  MDRQASLSEVGRETSWWNKVWKMRVPSKVKAFVWQSYHNSIPTMDNLQNHHVPVEGLCLV 233
            ++ Q       +   WW K W++ +PSKV+ F+W++ ++ +P    L + H+    +C +
Sbjct: 1037 LEEQQPSISGTQSQQWWKKFWRLSLPSKVRIFLWRAINDCLPATAVLHHKHIAQSPICPL 1096

BLAST of Spg037045 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10
Identity = 50/194 (25.77%), Postives = 84/194 (43.30%), Query Frame = 0

Query: 64  SSSYFWKGFVWG-RDLMKVGIRKNLGNGQSIKLFSDPWIPRPTTFRVVSPLHVSMENTVV 123
           S S  W+    G RD++  G+    G+GQ I+ ++D W+       + +    +  +TVV
Sbjct: 153 SWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSGKPLLELDNGERPTDCDTVV 212

Query: 124 V-DFFTPSHQWDIVKLNQFLVRE----------DVESGY--KLSMMMDRQASLS------ 183
             D + P   WD  K++ +              D+ +G   +LS    +    S      
Sbjct: 213 AKDLWIPGRGWDFAKIDPYTTNNTRLELRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYE 272

Query: 184 -----EVGRE--TSWWNKVWKMRVPSKVKAFVWQSYHNSIPTMDNLQNHHVPVEGLCLVC 231
                EV R    S++N +WK+RVP +VK F+W   + ++ T +     H+    +C VC
Sbjct: 273 MLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVC 332

BLAST of Spg037045 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.1e-06
Identity = 20/54 (37.04%), Postives = 36/54 (66.67%), Query Frame = 0

Query: 48  TKYFPNSSVLEASHHSSSSYFWKGFVWGRDLMKVGIRKNLGNGQSIKLFSDPWI 102
           ++YFP+SS++E S  +  SY W+  + GR+L+  G+ + +G+G   K++ D WI
Sbjct: 91  SRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWI 144

BLAST of Spg037045 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 2.4e-37
Identity = 84/231 (36.36%), Postives = 120/231 (51.95%), Query Frame = 0

Query: 32   WKQCSRENWLKWGDRNTKYFPNSSVLEASHHSSSSYFWKGFVWGRDLMKVGIRKNLGNGQ 91
            W+     N L       KYF ++S+L+AS++S SSYFWKGF+WGRDL+  G+R  +GNG 
Sbjct: 964  WRFLQHPNLLVSKVLKHKYFKDTSLLQASNNSKSSYFWKGFLWGRDLLVKGLRLRVGNGS 1023

Query: 92   SIKLFSDPWIPRPTTFRVVSPLHVSMENTVVVDFFTPSHQWDIVKLNQFLVRED------ 151
            +IK FSDPW+PRPTTF+ +   + +++ T V  F T    WD+  ++     ED      
Sbjct: 1024 TIKAFSDPWLPRPTTFKPLRFNNGALD-TTVASFITADGNWDVTSISHSFCNEDRDLILS 1083

Query: 152  -----------------------VESGYKLSMMMDRQASLSEVGRETSWWNKVWKMRVPS 211
                                   V SGYKL M +   A+ +      + WN +WK+ VP+
Sbjct: 1084 MPISSYNLQDSWLWHYDKRGNYSVRSGYKLYMHLKCNATSASTNYRGTQWNSIWKLTVPT 1143

Query: 212  KVKAFVWQSYHNSIPTMDNLQNHHVPVEGLCLVCKEETETSDHALFQCHRA 234
            K+K F+W+S H  IPT  NL    +     C +C +  E+  HA F C RA
Sbjct: 1144 KIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESIIHAFFHCKRA 1193

BLAST of Spg037045 vs. ExPASy TrEMBL
Match: A0A803NZC3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 4.0e-32
Identity = 75/208 (36.06%), Postives = 113/208 (54.33%), Query Frame = 0

Query: 32   WKQCSRENWLKWGDRNTKYFPNSSVLEASHHSSSSYFWKGFVWGRDLMKVGIRKNLGNGQ 91
            W+  S  N L       +Y  +SS L+A H S  S  W+G  WG++L+  G+R  +G+GQ
Sbjct: 845  WRIFSNPNCLLSRILKARYHSHSSFLDAGHGSYPSLTWQGIFWGKELLLKGLRWKVGDGQ 904

Query: 92   SIKLFSDPWIPRPTTFR--VVSPLHVSMENTVVVDFFTPSHQWDIVKLNQFLVREDVE-- 151
            SI    DPW+P  T F+  VV+ + + ++   V    TP   W+I  LN + +  D+E  
Sbjct: 905  SITCRYDPWLPGVTNFQPLVVTDIDLHLK---VSSLITPERIWNIDLLNSYFIPSDIERI 964

Query: 152  ---SGYKLSMMMDRQASLSEVGRETSWWNKVWKMRVPSKVKAFVWQSYHNSIPTMDNLQN 211
               SGY L+  ++ Q       +   WW K WK+ +PSKV+ F+W++ H+ +P    L +
Sbjct: 965  LIKSGYFLATNLEEQQPSISGMQSQQWWKKFWKLNLPSKVRIFLWRAIHDYLPATAILFH 1024

Query: 212  HHVPVEGLCLVCKEETETSDHALFQCHR 233
             H+     CL+CK E+ET  HALF CHR
Sbjct: 1025 RHIAESPCCLLCKSESETIMHALFYCHR 1049

BLAST of Spg037045 vs. ExPASy TrEMBL
Match: A0A2I0A354 (Ribonuclease H protein OS=Apostasia shenzhenica OX=1088818 GN=AXF42_Ash017513 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.9e-29
Identity = 66/228 (28.95%), Postives = 110/228 (48.25%), Query Frame = 0

Query: 32  WKQCSRENWLKWGDRNTKYFPNSSVLEASHHSSSSYFWKGFVWGRDLMKVGIRKNLGNGQ 91
           W+  +  N L       KYF N   L A    +SSY W+  +WGRDL+K+G+R  +GNG 
Sbjct: 295 WRIITHSNSLMARVLKAKYFHNCDFLMAQASPNSSYIWRSILWGRDLLKLGLRWRIGNGN 354

Query: 92  SIKLFSDPWIPRPTTFRVVSPLHVSMENTVVVDFFTPSHQWDIVKLNQFLVRED------ 151
           S+++F DPW+PRP +F+ ++  + ++  T +V+  T    W+  K+N  L   D      
Sbjct: 355 SVRVFGDPWLPRPISFQAITSPNPNLAATRIVELLTEDGSWNWEKINSILWSIDYHLILE 414

Query: 152 -----------------------VESGYKLSMMMDRQASLSEVGRETSWWNKVWKMRVPS 211
                                  V+SGY  +   +   + S  G    WW K+W  ++P+
Sbjct: 415 MPPCSTKFDDALIWHWDKKGSYSVKSGYVTTTQGESNVASSSNGGFNLWWKKLWSCKIPN 474

Query: 212 KVKAFVWQSYHNSIPTMDNLQNHHVPVEGLCLVCKEETETSDHALFQC 231
           K+K   W+++H+++ T  +L    +    +C  C E+ E   HAL+ C
Sbjct: 475 KLKTHAWRAFHSALLTRSSLAKRGILSNSICPCCMEDIECETHALWLC 522

BLAST of Spg037045 vs. ExPASy TrEMBL
Match: A0A803Q6Z2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.6e-28
Identity = 74/217 (34.10%), Postives = 109/217 (50.23%), Query Frame = 0

Query: 48   TKYFPNSSVLEASHHSSSSYFWKGFVWGRDLMKVGIRKNLGNGQSIKLFSDPWIPRPTTF 107
            ++YF     LEA+  +  S  WK  VWG++L+  G+R  +G+G  +   S PWIP P+ F
Sbjct: 1624 SRYFATGVFLEATAGAQPSLTWKSIVWGKELLLKGLRWRIGSGADVNCVSQPWIPGPSNF 1683

Query: 108  RVVSPLHVSMENTV-VVDFFTPSHQWDIVKLNQFLVREDVE------------------- 167
            + +  L +S +  V V DF T S QWD+ KL QF    DV+                   
Sbjct: 1684 KPL--LFLSPDRDVKVADFITHSRQWDVPKLQQFFTPPDVDRILSIPLSLFPCEDVLLWH 1743

Query: 168  ----------SGYKL-SMMMDRQASLSEVGRETSWWNKVWKMRVPSKVKAFVWQSYHNSI 227
                      SGYKL S + D Q + S      +WW   W +++PSK++ F W++YH ++
Sbjct: 1744 YSSAGFYTVKSGYKLASDVPDSQPNSSHT--TETWWQYFWGLKLPSKIRIFAWRAYHEAL 1803

Query: 228  PTMDNLQNHHVPVEGLCLVCKEETETSDHALFQCHRA 234
            PT   LQ  H+     C +C+   ET +HA F C+RA
Sbjct: 1804 PTAAILQYRHISSSPQCPLCQVHLETINHAFFWCNRA 1836

BLAST of Spg037045 vs. ExPASy TrEMBL
Match: A0A803NN93 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 7.9e-28
Identity = 71/218 (32.57%), Postives = 100/218 (45.87%), Query Frame = 0

Query: 45  DRNTKYFPNSSVLEASHHSSSSYFWKGFVWGRDLMKVGIRKNLGNGQSIKLFSDPWIPRP 104
           D + +YF     L AS    SS  W+G  +G++L+  G+R ++GNG  I+  SDPWIP  
Sbjct: 572 DHSARYFRTHDFLTASSAGVSSLTWQGICFGKELLIKGLRLHVGNGMHIRCGSDPWIPAQ 631

Query: 105 TTFRVVSPLHVSMENTVVVDFFTPSHQWDIVKLNQFLVREDVE----------------- 164
           T F  V      +E  +V D+ +  HQWDI KL       DVE                 
Sbjct: 632 TRFTPV--FFSGLEGNIVADYISADHQWDIDKLTSDFSALDVENILKIPLSHNAGTDSWV 691

Query: 165 ------------SGYKLSMMMDRQASLSEVGRETSWWNKVWKMRVPSKVKAFVWQSYHNS 224
                       SGY L+  M  Q   S     ++WW + W + +PSKVK F W+  HN+
Sbjct: 692 WHYTDAESYTVNSGYHLACSMASQEDSSCSSASSTWWKQFWNLNLPSKVKIFAWRVMHNA 751

Query: 225 IPTMDNLQNHHVPVEGLCLVCKEETETSDHALFQCHRA 234
           +P+  NL +  +     C +C    E+  HALF C  A
Sbjct: 752 LPSASNLHHRRIINSSTCSLCTNAWESIGHALFSCKHA 787

BLAST of Spg037045 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 2.2e-14
Identity = 57/243 (23.46%), Postives = 101/243 (41.56%), Query Frame = 0

Query: 32  WKQCSRENWLKWGDRNTKYFPNSSVLEASHHSSSSYFWKGFVWGRDLMKVGIRKNLGNGQ 91
           W+  SR   L      ++YF  S  L A   S  S+ WK     +++++ G R  +GNG+
Sbjct: 74  WRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEILRQGARAVVGNGE 133

Query: 92  SIKLFSDPWI---PRPTTFRV--VSPLHVSMENTV-----------------VVDFFTP- 151
            I ++   W+   P     R+  V P   +  +++                 V++   P 
Sbjct: 134 DIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGREWRKDVIEMLFPE 193

Query: 152 ------------------SHQWDIVKLNQFLVREDVESGY-KLSMMMDRQASLSEVGRET 211
                             S+ WD      + V+    SGY  L+ ++++++S  EV   +
Sbjct: 194 VERKLIGELRPGGRRILDSYTWDYTSSGDYTVK----SGYWVLTQIINKRSSPQEVSEPS 253

Query: 212 --SWWNKVWKMRVPSKVKAFVWQSYHNSIPTMDNLQNHHVPVEGLCLVCKEETETSDHAL 231
               + K+WK +   K++ F+W+   NS+P    L   H+  E  C+ C    ET +H L
Sbjct: 254 LNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLL 312

BLAST of Spg037045 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 3.0e-11
Identity = 50/218 (22.94%), Postives = 90/218 (41.28%), Query Frame = 0

Query: 49  KYFPNSSVLEASHHSSSSYFWKGFVWGRDLMKVGIRKNLGNGQSIKLFSDPWI----PRP 108
           +YF + S+L+A      SY W   + G  L+K G R  +G+GQ+I++  D  +    PRP
Sbjct: 4   RYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHPPRP 63

Query: 109 TTFRVVSPLHVSMENTVVVDFFTPSHQWDIVKLNQFLVRED------------------- 168
                    +  M    + +     + WD  K++QF+ + D                   
Sbjct: 64  LN---TEETYKEMTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKII 123

Query: 169 ----------VESGYKLSMMMDRQASLSEVG---RETSWWNKVWKMRVPSKVKAFVWQSY 228
                     V SGY L +  D   ++  +           ++W + +  K+K F+W++ 
Sbjct: 124 WNYNTTGEYTVRSGYWL-LTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRAL 183

Query: 229 HNSIPTMDNLQNHHVPVEGLCLVCKEETETSDHALFQC 231
             ++ T + L    + ++  C  C  E E+ +HALF C
Sbjct: 184 SQALATTERLTTRGMRIDPSCPRCHRENESINHALFTC 217

BLAST of Spg037045 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.5e-07
Identity = 22/60 (36.67%), Postives = 33/60 (55.00%), Query Frame = 0

Query: 174 KVWKMRVPSKVKAFVWQSYHNSIPTMDNLQNHHVPVEGLCLVCKEETETSDHALFQCHRA 233
           K+WK++   K+K F+W+    ++ T DNL+  H+     C  C +E ETS H  F C  A
Sbjct: 17  KIWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYA 76

BLAST of Spg037045 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 52.4 bits (124), Expect = 5.8e-07
Identity = 20/54 (37.04%), Postives = 36/54 (66.67%), Query Frame = 0

Query: 48  TKYFPNSSVLEASHHSSSSYFWKGFVWGRDLMKVGIRKNLGNGQSIKLFSDPWI 102
           ++YFP+SS++E S  +  SY W+  + GR+L+  G+ + +G+G   K++ D WI
Sbjct: 91  SRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWI 144

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022158377.15.0e-3736.36uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_024950112.11.7e-2932.47uncharacterized protein LOC112496847 [Citrus sinensis][more]
PKA49974.13.9e-2928.95Putative ribonuclease H protein [Apostasia shenzhenica][more]
XP_030509050.13.3e-2834.10uncharacterized protein LOC115723712 [Cannabis sativa][more]
XP_030486845.18.1e-2728.40uncharacterized protein LOC115703751 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
P0C2F61.1e-1025.77Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
P932958.1e-0637.04Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A6J1DX302.4e-3736.36uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A803NZC34.0e-3236.06Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A2I0A3541.9e-2928.95Ribonuclease H protein OS=Apostasia shenzhenica OX=1088818 GN=AXF42_Ash017513 PE... [more]
A0A803Q6Z21.6e-2834.10Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803NN937.9e-2832.57Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G29090.12.2e-1423.46Ribonuclease H-like superfamily protein [more]
AT3G09510.13.0e-1122.94Ribonuclease H-like superfamily protein [more]
AT3G25270.11.5e-0736.67Ribonuclease H-like superfamily protein [more]
ATMG00310.15.8e-0737.04RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 165..231
e-value: 3.4E-19
score: 69.3
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 136..231
NoneNo IPR availablePANTHERPTHR46736:SF6SUBFAMILY NOT NAMEDcoord: 136..231

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg037045.1Spg037045.1mRNA