Spg000247.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg000247.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	B-box zinc finger protein 20-like
Location	scaffold8: 37954716 .. 37955333 (+)
Sequence length	618
RNA-Seq Expression	Spg000247.1
Synteny	Spg000247.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATCCGTTGTGATGTTTGCGACAAAGAAGAAGCCTCTGTTTTCTGCCCCTCCGACGAAGCCGCCCTCTGCGCCGCCTGTGACCACCACGTCCACCGCGCCAACAAGCTCGCCGGAAAACATGGCCGTTTCTCTCTCCTCCGATCCGCCTCCGCCGCCGATTTGCCGCCGTTGTGCGATATCTGCCAGCTCCGGCGAGCATTTCTGTTCTGTCGCGAAGACAGAGCAATCCTCTGTAGAGAATGTGACATTCCAATCCACGGCGCCAACGAACACACCCAGAAGCACAGCCGGTTTCTTCTCACCGGAGTGAAGATCTCGCCGTCGCCGGCGACTTCTTCTTCCTCCTCCACCTCCGTCGCCGGCGAGGAGGAGGCTGCACTTGAAGCTGAAACTGGGTTCTTCAATGCGTGCTCGAGGAAGAGGGCTAAAATGGCGTCGTCTAATGGGTTGCTTCGAGGTCCTTTAATGGAGGATTTACAGCCATCAATCAGTGATAATGGGGTTTCGTTTTCCACTAGCAGCATTTCAGAGTATTTGGAGAGTTTGCCTGGTTGGTGTGTTGAGGAATTTCTTGATTCTTCTTCTGCGACTGATGTTTTCTGTAAAGTTTGA

mRNA sequence

ATGAAGATCCGTTGTGATGTTTGCGACAAAGAAGAAGCCTCTGTTTTCTGCCCCTCCGACGAAGCCGCCCTCTGCGCCGCCTGTGACCACCACGTCCACCGCGCCAACAAGCTCGCCGGAAAACATGGCCGTTTCTCTCTCCTCCGATCCGCCTCCGCCGCCGATTTGCCGCCGTTGTGCGATATCTGCCAGCTCCGGCGAGCATTTCTGTTCTGTCGCGAAGACAGAGCAATCCTCTGTAGAGAATGTGACATTCCAATCCACGGCGCCAACGAACACACCCAGAAGCACAGCCGGTTTCTTCTCACCGGAGTGAAGATCTCGCCGTCGCCGGCGACTTCTTCTTCCTCCTCCACCTCCGTCGCCGGCGAGGAGGAGGCTGCACTTGAAGCTGAAACTGGGTTCTTCAATGCGTGCTCGAGGAAGAGGGCTAAAATGGCGTCGTCTAATGGGTTGCTTCGAGGTCCTTTAATGGAGGATTTACAGCCATCAATCAGTGATAATGGGGTTTCGTTTTCCACTAGCAGCATTTCAGAGTATTTGGAGAGTTTGCCTGGTTGGTGTGTTGAGGAATTTCTTGATTCTTCTTCTGCGACTGATGTTTTCTGTAAAGTTTGA

Coding sequence (CDS)

ATGAAGATCCGTTGTGATGTTTGCGACAAAGAAGAAGCCTCTGTTTTCTGCCCCTCCGACGAAGCCGCCCTCTGCGCCGCCTGTGACCACCACGTCCACCGCGCCAACAAGCTCGCCGGAAAACATGGCCGTTTCTCTCTCCTCCGATCCGCCTCCGCCGCCGATTTGCCGCCGTTGTGCGATATCTGCCAGCTCCGGCGAGCATTTCTGTTCTGTCGCGAAGACAGAGCAATCCTCTGTAGAGAATGTGACATTCCAATCCACGGCGCCAACGAACACACCCAGAAGCACAGCCGGTTTCTTCTCACCGGAGTGAAGATCTCGCCGTCGCCGGCGACTTCTTCTTCCTCCTCCACCTCCGTCGCCGGCGAGGAGGAGGCTGCACTTGAAGCTGAAACTGGGTTCTTCAATGCGTGCTCGAGGAAGAGGGCTAAAATGGCGTCGTCTAATGGGTTGCTTCGAGGTCCTTTAATGGAGGATTTACAGCCATCAATCAGTGATAATGGGGTTTCGTTTTCCACTAGCAGCATTTCAGAGTATTTGGAGAGTTTGCCTGGTTGGTGTGTTGAGGAATTTCTTGATTCTTCTTCTGCGACTGATGTTTTCTGTAAAGTTTGA

Protein sequence

MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRSASAADLPPLCDICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKISPSPATSSSSSTSVAGEEEAALEAETGFFNACSRKRAKMASSNGLLRGPLMEDLQPSISDNGVSFSTSSISEYLESLPGWCVEEFLDSSSATDVFCKV

Homology

[Close]

BLAST of Spg000247.1 vs. NCBI nr
Match: KAG6571083.1 (B-box zinc finger protein 21, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010899.1 B-box zinc finger protein 21, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 325.9 bits (834), Expect = 2.6e-85
Identity = 168/216 (77.78%), Postives = 179/216 (82.87%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRSASAADLPPLC 60
           MKIRCDVC+KEEASVFCPSDEAALC+ACDHHVHRANKLA KH RF+LLRS   A+ PP C
Sbjct: 1   MKIRCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLLRSTPTANSPPSC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKISPSPATSSSSSTS 120
           DICQ+RRAFLFC EDRAILCRECDIPIHGA+EHTQKHSRFLLTGVK+SPSPATSSSSST 
Sbjct: 61  DICQVRRAFLFCLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSPATSSSSSTV 120

Query: 121 VAG----EEEAALEAETGFFNACSRKRAKMASSNGLLRGPLMEDLQPSI-------SDNG 180
             G     EE  +EAE G F A SRK+AKM  S GLLRGPLMEDLQ  I       S+NG
Sbjct: 121 SGGGSDESEEVTIEAEIGIFKASSRKKAKM-GSKGLLRGPLMEDLQAPIVGNFGGMSENG 180

Query: 181 VSFSTSSISEYLESLPGWCVEEFLDSSSATDVFCKV 206
           VSFSTS+ISEYLESLPGWCVEEFLDSS   DVFCKV
Sbjct: 181 VSFSTSNISEYLESLPGWCVEEFLDSSCVADVFCKV 215

[Close]

BLAST of Spg000247.1 vs. NCBI nr
Match: XP_022944246.1 (B-box zinc finger protein 20-like [Cucurbita moschata])

HSP 1 Score: 322.8 bits (826), Expect = 2.2e-84
Identity = 168/216 (77.78%), Postives = 181/216 (83.80%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRSASAADLPPLC 60
           MKIRCDVC+KEEASVFCPSDEAALC+ACDHHVHRANKLA KH RF+LLRS    + PP C
Sbjct: 1   MKIRCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLLRSTPTGNSPPSC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKISPSPATSSSSST- 120
           DICQ+RRAFLFC EDRAILCRECDIPIHGA+EHTQKHSRFLLTGVK+SPSPATSSSSST 
Sbjct: 61  DICQVRRAFLFCLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSPATSSSSSTV 120

Query: 121 SVAGEEEAA---LEAETGFFNACSRKRAKMASSNGLLRGPLMEDLQPSI-------SDNG 180
           S  G +E+A   +EAE G F A SRK+AKM  S GLLRGPLMEDLQ  I       S+NG
Sbjct: 121 SGGGSDESAEVTIEAEIGIFKASSRKKAKM-GSKGLLRGPLMEDLQAPIVGNFGGMSENG 180

Query: 181 VSFSTSSISEYLESLPGWCVEEFLDSSSATDVFCKV 206
           VSFSTS+ISEYLESLPGWCVEEFLDSS   DVFCKV
Sbjct: 181 VSFSTSNISEYLESLPGWCVEEFLDSSCVADVFCKV 215

[Close]

BLAST of Spg000247.1 vs. NCBI nr
Match: XP_022986607.1 (B-box zinc finger protein 20-like [Cucurbita maxima])

HSP 1 Score: 315.5 bits (807), Expect = 3.5e-82
Identity = 164/215 (76.28%), Postives = 175/215 (81.40%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRSASAADLPPLC 60
           MKI CDVC+KEEASVFCPSDEAALC+ACDHHVHRANKLA KH RF+L RS   A+ PP C
Sbjct: 1   MKIHCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLFRSTPTANSPPSC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKISPSPATSSSSSTS 120
           DICQ+RRAFLF  EDRAILCRECDIPIHGA+EHTQKHSRFLLTGVK+SPSPATSSSSS+ 
Sbjct: 61  DICQVRRAFLFYLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSPATSSSSSSI 120

Query: 121 VAG---EEEAALEAETGFFNACSRKRAKMASSNGLLRGPLMEDLQPSI-------SDNGV 180
             G    EE  +EAE G F A SRK AKM  S GLLRGPLMEDLQ  I       S+NGV
Sbjct: 121 SGGGDESEEVTIEAEIGIFKARSRKEAKM-GSKGLLRGPLMEDLQAPIVGNFGGMSENGV 180

Query: 181 SFSTSSISEYLESLPGWCVEEFLDSSSATDVFCKV 206
           SFSTS+ISEYLESLPGWCVEEFLDSS   DVFCKV
Sbjct: 181 SFSTSNISEYLESLPGWCVEEFLDSSCVADVFCKV 214

[Close]

BLAST of Spg000247.1 vs. NCBI nr
Match: XP_023513248.1 (B-box zinc finger protein 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.3 bits (804), Expect = 7.7e-82
Identity = 160/215 (74.42%), Postives = 175/215 (81.40%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRSASAADLPPLC 60
           MKIRCDVC++EEASVFCPSDEAALC+ACDHHVH ANKLA KH RF+LLRS    + PP C
Sbjct: 1   MKIRCDVCNREEASVFCPSDEAALCSACDHHVHCANKLAEKHSRFTLLRSTPTVNSPPSC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKISPSPATSSSSSTS 120
           DICQ+RRAFLFC EDRAILCRECDIPIHGA+EHTQKHSRFLLTGVK+SPSP TSSSSS+ 
Sbjct: 61  DICQVRRAFLFCLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSPTTSSSSSSV 120

Query: 121 VAG---EEEAALEAETGFFNACSRKRAKMASSNGLLRGPLMEDLQPSI-------SDNGV 180
             G    EE  +EAE G F   SRK AKM  S GL+RGP+MEDLQP I       S+NGV
Sbjct: 121 SGGGDESEEVTIEAEIGIFKTRSRKEAKM-GSKGLIRGPVMEDLQPPIVGKFGGMSENGV 180

Query: 181 SFSTSSISEYLESLPGWCVEEFLDSSSATDVFCKV 206
           +FSTS+ISEYLESLPGWCVEEFLDSS   DVFCKV
Sbjct: 181 AFSTSNISEYLESLPGWCVEEFLDSSCVADVFCKV 214

[Close]

BLAST of Spg000247.1 vs. NCBI nr
Match: XP_038902472.1 (B-box zinc finger protein 21-like [Benincasa hispida])

HSP 1 Score: 287.7 bits (735), Expect = 7.7e-74
Identity = 153/209 (73.21%), Postives = 169/209 (80.86%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRS-ASAADLPPL 60
           MKIRCDVCDKEEASVFCPSDEAALCAACD HVHRANKLAGKH RFSLL+S A+A D  PL
Sbjct: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDRHVHRANKLAGKHNRFSLLQSTAAAVDSLPL 60

Query: 61  CDICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKISPSPAT---SSS 120
           CDICQ+RRAFLFCREDRAILCRECDI IH  ++HTQKHSRFLLTGVK+SPSPAT   SSS
Sbjct: 61  CDICQVRRAFLFCREDRAILCRECDISIHSISDHTQKHSRFLLTGVKVSPSPATSTSSSS 120

Query: 121 SSTSVAGEEEAALEAETGFFNACSRKRAKMASSNGLLRGPLMEDLQPSISDNGVSFSTSS 180
           SS+SV+G  +  +E E G    CS+KRAKM     L R PL    +  + +NG SF+ SS
Sbjct: 121 SSSSVSGGGK-EIEGEIGLLKKCSKKRAKMEE---LPRQPLNVG-KLEVEENGESFTRSS 180

Query: 181 ISEYLESLPGWCVEEFLDSSSATDVFCKV 206
           ISEYLESLPGWCVEEFLDSS A D+FCKV
Sbjct: 181 ISEYLESLPGWCVEEFLDSSCAADIFCKV 204

[Close]

BLAST of Spg000247.1 vs. ExPASy Swiss-Prot
Match: Q9LQZ7 (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.6e-48
Identity = 109/209 (52.15%), Postives = 139/209 (66.51%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRSASAADLPPLC 60
           MKIRCDVCDKEEASVFC +DEA+LC  CDH VH ANKLA KH RFSLL  +S+    PLC
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKISPSPA----TSSS 120
           DICQ ++A LFC++DRAILC++CD  IH ANEHT+KH RFLLTGVK+S + +    TS S
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120

Query: 121 SSTSVAGEEEAALEAETGFFNACSRKRAKMASSNGLLRGPLMEDLQPSISDNGVSFSTSS 180
           SS+S + ++ +   +         +  +    SN +     +     S++  G   STS+
Sbjct: 121 SSSSSSNQDFSVPGSSISNPPPLKKPLSAPPQSNKIQPFSKINGGDASVNQWG---STST 180

Query: 181 ISEYL-ESLPGWCVEEFLDSSSATDVFCK 205
           ISEYL ++LPGW VE+FLDSS  T  F K
Sbjct: 181 ISEYLMDTLPGWHVEDFLDSSLPTYGFSK 206

[Close]

BLAST of Spg000247.1 vs. ExPASy Swiss-Prot
Match: Q0IGM7 (B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 7.1e-46
Identity = 113/205 (55.12%), Postives = 137/205 (66.83%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRSASAADLPPLC 60
           MKI C VCDKEEASVFC +DEAALC  CD HVH ANKLAGKH RFS L S +  D  PLC
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFS-LTSPTFKD-APLC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKISPSPA----TSSS 120
           DIC  RRA LFC+EDRAILCRECDIPIH ANEHT+KH+RFLLTGVKIS SP+     S+S
Sbjct: 61  DICGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNS 120

Query: 121 SSTSVAGEEEAALEAETGFFNACSRKRAKMASSNGLLRGPL--MEDLQPSISDNGV-SFS 180
           +S +  G  +   ++ +    + +      +SS+         +E+    +SD+G  S  
Sbjct: 121 NSAAAFGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNCYYGIEENYHHVSDSGSGSGC 180

Query: 181 TSSISEYL-ESLPGWCVEEFLDSSS 198
           T SISEYL E+LPGW VE+ L+  S
Sbjct: 181 TGSISEYLMETLPGWRVEDLLEHPS 203

[Close]

BLAST of Spg000247.1 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 7.1e-30
Identity = 65/132 (49.24%), Postives = 84/132 (63.64%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRSASAADLPPLC 60
           MKI+C+VC+  EA+V C +DEAALC ACD  +H ANKLAGKH R  L  SAS+    P C
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSI---PKC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKISPSPATSSSSSTS 120
           DICQ    F FC +DRA+LCR+CD+ IH  N H   H RFLLTG+K+      +  S+ S
Sbjct: 61  DICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKS 120

Query: 121 VAGEEEAALEAE 133
               ++  +E +
Sbjct: 121 SPTNDDKTMETK 129

[Close]

BLAST of Spg000247.1 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.9e-28
Identity = 60/108 (55.56%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRSASAADLPPLC 60
           MKI+CDVC+K  A+V C +DEAALC  CD  +H ANKLA KH R  L    S +   P C
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHL---NSLSTKFPRC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKIS 109
           DICQ + AF+FC EDRA+LCR+CD  IH AN  +  H RFL TG+K++
Sbjct: 61  DICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVA 105

[Close]

BLAST of Spg000247.1 vs. ExPASy Swiss-Prot
Match: O82617 (B-box zinc finger protein 23 OS=Arabidopsis thaliana OX=3702 GN=BBX23 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.6e-26
Identity = 65/156 (41.67%), Postives = 92/156 (58.97%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLR---SASAADLP 60
           MKI+C+VC+K EA V C SDEA LC  CD  VH ANKL  +H R +L +   SA+ A   
Sbjct: 1   MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGA 60

Query: 61  PLCDICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKISPSPATSSSS 120
           PLCDICQ R+ + FC EDRA+LC +CD  IH  N     H RFLL+GV++S    T +S 
Sbjct: 61  PLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCN----SHQRFLLSGVQVSDQSLTENSE 120

Query: 121 STSVAGEEEAALEAETGFFNACSRKRAKMASSNGLL 154
            ++    E   ++++    +  S +  +  +S  ++
Sbjct: 121 CSTSFSSETYQIQSKVSLNSQYSSEETEAGNSGEIV 152

[Close]

BLAST of Spg000247.1 vs. ExPASy TrEMBL
Match: A0A6J1FTW5 (B-box zinc finger protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111448752 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.0e-84
Identity = 168/216 (77.78%), Postives = 181/216 (83.80%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRSASAADLPPLC 60
           MKIRCDVC+KEEASVFCPSDEAALC+ACDHHVHRANKLA KH RF+LLRS    + PP C
Sbjct: 1   MKIRCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLLRSTPTGNSPPSC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKISPSPATSSSSST- 120
           DICQ+RRAFLFC EDRAILCRECDIPIHGA+EHTQKHSRFLLTGVK+SPSPATSSSSST 
Sbjct: 61  DICQVRRAFLFCLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSPATSSSSSTV 120

Query: 121 SVAGEEEAA---LEAETGFFNACSRKRAKMASSNGLLRGPLMEDLQPSI-------SDNG 180
           S  G +E+A   +EAE G F A SRK+AKM  S GLLRGPLMEDLQ  I       S+NG
Sbjct: 121 SGGGSDESAEVTIEAEIGIFKASSRKKAKM-GSKGLLRGPLMEDLQAPIVGNFGGMSENG 180

Query: 181 VSFSTSSISEYLESLPGWCVEEFLDSSSATDVFCKV 206
           VSFSTS+ISEYLESLPGWCVEEFLDSS   DVFCKV
Sbjct: 181 VSFSTSNISEYLESLPGWCVEEFLDSSCVADVFCKV 215

[Close]

BLAST of Spg000247.1 vs. ExPASy TrEMBL
Match: A0A6J1J816 (B-box zinc finger protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111484297 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.7e-82
Identity = 164/215 (76.28%), Postives = 175/215 (81.40%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRSASAADLPPLC 60
           MKI CDVC+KEEASVFCPSDEAALC+ACDHHVHRANKLA KH RF+L RS   A+ PP C
Sbjct: 1   MKIHCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLFRSTPTANSPPSC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKISPSPATSSSSSTS 120
           DICQ+RRAFLF  EDRAILCRECDIPIHGA+EHTQKHSRFLLTGVK+SPSPATSSSSS+ 
Sbjct: 61  DICQVRRAFLFYLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSPATSSSSSSI 120

Query: 121 VAG---EEEAALEAETGFFNACSRKRAKMASSNGLLRGPLMEDLQPSI-------SDNGV 180
             G    EE  +EAE G F A SRK AKM  S GLLRGPLMEDLQ  I       S+NGV
Sbjct: 121 SGGGDESEEVTIEAEIGIFKARSRKEAKM-GSKGLLRGPLMEDLQAPIVGNFGGMSENGV 180

Query: 181 SFSTSSISEYLESLPGWCVEEFLDSSSATDVFCKV 206
           SFSTS+ISEYLESLPGWCVEEFLDSS   DVFCKV
Sbjct: 181 SFSTSNISEYLESLPGWCVEEFLDSSCVADVFCKV 214

[Close]

BLAST of Spg000247.1 vs. ExPASy TrEMBL
Match: A0A6J1CZ53 (B-box zinc finger protein 20-like OS=Momordica charantia OX=3673 GN=LOC111015522 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.9e-70
Identity = 147/204 (72.06%), Postives = 159/204 (77.94%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRSASAADLPPLC 60
           MKIRCDVCD EEASVFCPSDEAALCAACD  VHRANKLAGKH RFSL+  A AA+LPP C
Sbjct: 1   MKIRCDVCDIEEASVFCPSDEAALCAACDRQVHRANKLAGKHSRFSLIPFADAAELPPPC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKISPSPATSSSSSTS 120
           DICQLRRA LFC+EDRAILC ECDIPIH ANEHT+ H RFLLTGVKI P+ A    SST 
Sbjct: 61  DICQLRRAVLFCKEDRAILCSECDIPIHEANEHTRNHGRFLLTGVKILPATA----SSTG 120

Query: 121 VAGEEEAALEAETGFFNACSRKRAKMASSNGLLRGPLMEDLQPSISD---------NGVS 180
               E AA++AE   F+  SRKRAK+  SNGLLR PLME+ QPSI +         +GVS
Sbjct: 121 AGRVEGAAIDAEKIGFSRASRKRAKI-GSNGLLRDPLMEEFQPSIGNLEFEESGISDGVS 180

Query: 181 FSTSSISEYLESLPGWCVEEFLDS 196
           FS SSISEYLESLPGWCVEEFLDS
Sbjct: 181 FSKSSISEYLESLPGWCVEEFLDS 199

[Close]

BLAST of Spg000247.1 vs. ExPASy TrEMBL
Match: A0A0A0LIV6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G250430 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.7e-64
Identity = 136/206 (66.02%), Postives = 150/206 (72.82%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRS----ASAADL 60
           MKIRCDVCDKEEASVFCPSDEAALCA CD  +HRANKLA +H RFSLL S    ++AA  
Sbjct: 1   MKIRCDVCDKEEASVFCPSDEAALCAPCDRQIHRANKLASQHNRFSLLHSSASASAAATS 60

Query: 61  PPLCDICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKISPSPATSSS 120
            PLCDICQ+RRAFLFCREDRAILCRECDIPIH  +EHTQKHSRFLLTGVK+SPSPATSSS
Sbjct: 61  EPLCDICQIRRAFLFCREDRAILCRECDIPIHDTSEHTQKHSRFLLTGVKVSPSPATSSS 120

Query: 121 SSTSVAGEEEAALEAETGFFNACSRKRAKMASSNGLLRGPLMEDLQPSISDNGVSFSTSS 180
            S+SVA    ++ E   G    CSRKR+KM  S GL+                       
Sbjct: 121 CSSSVA----SSGEENEGSLKKCSRKRSKMGFSKGLV----------------------- 179

Query: 181 ISEYLESLPGWCVEEFLDSSSATDVF 203
           ISEYLESLPGWCVEEFLDSSS+  +F
Sbjct: 181 ISEYLESLPGWCVEEFLDSSSSPHLF 179

[Close]

BLAST of Spg000247.1 vs. ExPASy TrEMBL
Match: A0A5A7TQI3 (B-box zinc finger protein 21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00410 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 5.1e-63
Identity = 135/204 (66.18%), Postives = 148/204 (72.55%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRSA--SAADLPP 60
           MKIRCDVCDKEEASVFCPSDEAALC ACD  VHRANKLA KH RFSLL SA  +AA   P
Sbjct: 1   MKIRCDVCDKEEASVFCPSDEAALCPACDRQVHRANKLASKHSRFSLLHSAASAAATSQP 60

Query: 61  LCDICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKISPSPATSSSSS 120
           LCD+CQ++RAFLFCREDRAILCRECDIPIH  +EHTQKHSRFLLTGVK+SPS ATSSS S
Sbjct: 61  LCDVCQIQRAFLFCREDRAILCRECDIPIHDTSEHTQKHSRFLLTGVKVSPSTATSSSCS 120

Query: 121 TSV-AGEEEAALEAETGFFNACSRKRAKMASSNGLLRGPLMEDLQPSISDNGVSFSTSSI 180
           +SV +G EE       G    CSRKR+KM  S GL+                       I
Sbjct: 121 SSVGSGGEE-----NEGLLKKCSRKRSKMGFSKGLV-----------------------I 176

Query: 181 SEYLESLPGWCVEEFLDSSSATDV 202
           SEYLESLPGWCVE+FLDSSS+  +
Sbjct: 181 SEYLESLPGWCVEDFLDSSSSPHI 176

[Close]

BLAST of Spg000247.1 vs. TAIR 10
Match: AT1G75540.1 (salt tolerance homolog2 )

HSP 1 Score: 193.4 bits (490), Expect = 1.8e-49
Identity = 109/209 (52.15%), Postives = 139/209 (66.51%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRSASAADLPPLC 60
           MKIRCDVCDKEEASVFC +DEA+LC  CDH VH ANKLA KH RFSLL  +S+    PLC
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKISPSPA----TSSS 120
           DICQ ++A LFC++DRAILC++CD  IH ANEHT+KH RFLLTGVK+S + +    TS S
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120

Query: 121 SSTSVAGEEEAALEAETGFFNACSRKRAKMASSNGLLRGPLMEDLQPSISDNGVSFSTSS 180
           SS+S + ++ +   +         +  +    SN +     +     S++  G   STS+
Sbjct: 121 SSSSSSNQDFSVPGSSISNPPPLKKPLSAPPQSNKIQPFSKINGGDASVNQWG---STST 180

Query: 181 ISEYL-ESLPGWCVEEFLDSSSATDVFCK 205
           ISEYL ++LPGW VE+FLDSS  T  F K
Sbjct: 181 ISEYLMDTLPGWHVEDFLDSSLPTYGFSK 206

[Close]

BLAST of Spg000247.1 vs. TAIR 10
Match: AT4G39070.1 (B-box zinc finger family protein )

HSP 1 Score: 185.3 bits (469), Expect = 5.0e-47
Identity = 113/205 (55.12%), Postives = 137/205 (66.83%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRSASAADLPPLC 60
           MKI C VCDKEEASVFC +DEAALC  CD HVH ANKLAGKH RFS L S +  D  PLC
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFS-LTSPTFKD-APLC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKISPSPA----TSSS 120
           DIC  RRA LFC+EDRAILCRECDIPIH ANEHT+KH+RFLLTGVKIS SP+     S+S
Sbjct: 61  DICGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNS 120

Query: 121 SSTSVAGEEEAALEAETGFFNACSRKRAKMASSNGLLRGPL--MEDLQPSISDNGV-SFS 180
           +S +  G  +   ++ +    + +      +SS+         +E+    +SD+G  S  
Sbjct: 121 NSAAAFGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNCYYGIEENYHHVSDSGSGSGC 180

Query: 181 TSSISEYL-ESLPGWCVEEFLDSSS 198
           T SISEYL E+LPGW VE+ L+  S
Sbjct: 181 TGSISEYLMETLPGWRVEDLLEHPS 203

[Close]

BLAST of Spg000247.1 vs. TAIR 10
Match: AT1G78600.1 (light-regulated zinc finger protein 1 )

HSP 1 Score: 132.1 bits (331), Expect = 5.1e-31
Identity = 65/132 (49.24%), Postives = 84/132 (63.64%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRSASAADLPPLC 60
           MKI+C+VC+  EA+V C +DEAALC ACD  +H ANKLAGKH R  L  SAS+    P C
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSI---PKC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKISPSPATSSSSSTS 120
           DICQ    F FC +DRA+LCR+CD+ IH  N H   H RFLLTG+K+      +  S+ S
Sbjct: 61  DICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKS 120

Query: 121 VAGEEEAALEAE 133
               ++  +E +
Sbjct: 121 SPTNDDKTMETK 129

[Close]

BLAST of Spg000247.1 vs. TAIR 10
Match: AT1G78600.2 (light-regulated zinc finger protein 1 )

HSP 1 Score: 132.1 bits (331), Expect = 5.1e-31
Identity = 65/132 (49.24%), Postives = 84/132 (63.64%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRSASAADLPPLC 60
           MKI+C+VC+  EA+V C +DEAALC ACD  +H ANKLAGKH R  L  SAS+    P C
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSI---PKC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKISPSPATSSSSSTS 120
           DICQ    F FC +DRA+LCR+CD+ IH  N H   H RFLLTG+K+      +  S+ S
Sbjct: 61  DICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKS 120

Query: 121 VAGEEEAALEAE 133
               ++  +E +
Sbjct: 121 SPTNDDKTMETK 129

[Close]

BLAST of Spg000247.1 vs. TAIR 10
Match: AT1G06040.2 (B-box zinc finger family protein )

HSP 1 Score: 126.3 bits (316), Expect = 2.8e-29
Identity = 60/108 (55.56%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDHHVHRANKLAGKHGRFSLLRSASAADLPPLC 60
           MKI+CDVC+K  A+V C +DEAALC  CD  +H ANKLA KH R  L    S +   P C
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHL---NSLSTKFPRC 60

Query: 61  DICQLRRAFLFCREDRAILCRECDIPIHGANEHTQKHSRFLLTGVKIS 109
           DICQ + AF+FC EDRA+LCR+CD  IH AN  +  H RFL TG+K++
Sbjct: 61  DICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVA 105

The following BLAST results are available for this feature:

BLAST of Spg000247.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571083.1	2.6e-85	77.78	B-box zinc finger protein 21, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022944246.1	2.2e-84	77.78	B-box zinc finger protein 20-like [Cucurbita moschata]	[more]
XP_022986607.1	3.5e-82	76.28	B-box zinc finger protein 20-like [Cucurbita maxima]	[more]
XP_023513248.1	7.7e-82	74.42	B-box zinc finger protein 20-like [Cucurbita pepo subsp. pepo]	[more]
XP_038902472.1	7.7e-74	73.21	B-box zinc finger protein 21-like [Benincasa hispida]	[more]

BLAST of Spg000247.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQZ7	2.6e-48	52.15	B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1	[more]
Q0IGM7	7.1e-46	55.12	B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1	[more]
Q9SYM2	7.1e-30	49.24	B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2	[more]
Q96288	3.9e-28	55.56	B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1	[more]
O82617	1.6e-26	41.67	B-box zinc finger protein 23 OS=Arabidopsis thaliana OX=3702 GN=BBX23 PE=1 SV=1	[more]

BLAST of Spg000247.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTW5	1.0e-84	77.78	B-box zinc finger protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111448752 ...	[more]
A0A6J1J816	1.7e-82	76.28	B-box zinc finger protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111484297 PE...	[more]
A0A6J1CZ53	1.9e-70	72.06	B-box zinc finger protein 20-like OS=Momordica charantia OX=3673 GN=LOC111015522...	[more]
A0A0A0LIV6	2.7e-64	66.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G250430 PE=4 SV=1	[more]
A0A5A7TQI3	5.1e-63	66.18	B-box zinc finger protein 21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Spg000247.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75540.1	1.8e-49	52.15	salt tolerance homolog2	[more]
AT4G39070.1	5.0e-47	55.12	B-box zinc finger family protein	[more]
AT1G78600.1	5.1e-31	49.24	light-regulated zinc finger protein 1	[more]
AT1G78600.2	5.1e-31	49.24	light-regulated zinc finger protein 1	[more]
AT1G06040.2	2.8e-29	55.56	B-box zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 55..102 e-value: 5.7E-14 score: 62.4 coord: 4..47 e-value: 1.4E-8 score: 44.5
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 58..94 e-value: 4.6E-6 score: 26.7 coord: 3..43 e-value: 1.3E-6 score: 28.4
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 59..102 score: 9.555901
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 1..47 score: 10.281345
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 1..102 e-value: 3.4E-9 score: 39.1
None	No IPR available	PANTHER	PTHR31832:SF52	B-BOX ZINC FINGER PROTEIN 20	coord: 1..204
None	No IPR available	PANTHER	PTHR31832	B-BOX ZINC FINGER PROTEIN 22	coord: 1..204
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 59..102 e-value: 1.25082E-13 score: 60.7743
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 5..47 e-value: 9.61654E-14 score: 61.1595

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg000247	Spg000247	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg000247.1-cds	Spg000247.1-cds-scaffold8:37954716..37955333	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg000247.1	Spg000247.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009640	photomorphogenesis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008270	zinc ion binding