HG10003911 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10003911
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	40S ribosomal protein S8
Location	Chr08: 11516208 .. 11523218 (-)
RNA-Seq Expression	HG10003911
Synteny	HG10003911

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTAAGTTTTGCCTAAAGAAGTCAAAACCAAACCAAACGTCAAAAAGAGGGAGGAAAAAAAGCCAAAAGCCCAGAAAACAGGGTAGTGTCCGTGCTCCGTGGCACTACAACTTGGCATCAACCACAAAGAAGAGGTAAAGCAGCAGCGTTGCAACATTTCACGAACAAAAGCATGCACAAAATCGATAGAGTGTCGCGGCAAAAAATTCTCCTTTTCCTAAACGAATTAGGGTTTCAGTTTGCTTATAAAAGGAGGGGTTCTCAGCCTTCTTAAGCACGAAAATTTGAATTCAATTTTTGAACACTCAATTACATAACATTTTTTTCCTAAACACCAAACATATTTCAAACAAATAAAAACTTTTCACAACTACTTAGCTCTCAATCATGAACACTGAAGAAACTTAAAAATTGAACAAATAATTTGAACACTCAATTGCAAGACTATTTTATTTACATTCTCAAAGACATATCATATTTCAATAAAATGAATATAATCTCTACTCCCAAATCCTTAATTTTATTTACATCCCCAAAGACATGTCATATTCAAATAAGATAAACATTTTCTCTACTTCCTAACCCTCAATTAATTTTAACTCAACCATAAATGTTATTTAAAAAAAAAATTATCTTGTTTTTTGCCCATTTGTAAAATATAATTTTGATTTTTATGGTTAATGATTTTTTTTCCTTTTTGTGCAAACATTTGATTATTTACATTTTACACTATACAAAGAAATGATATTTTTTTTTCTTTTTTGTGTAAATTCATTTTTTGCAAACATTTATTGTTCAAACAATTTGTATGGCTAGTTTTTATGGTTAATTCTAATTTGTCACTTACAAATGAAATAATAATGTCCACAAAAATGTGTATGTATATGTAAAAAAAGTGCACAGCATTGAATAATACTAAATACATCACAAATTGTTTCCCAACAATTAAACAAAATTTGGATTATAAAAAGTATACTTCGAACTTAAAACTAATGAACCTCAAACTAATTGTTGGAGGAATTGTGCTATTAGTTTGGTTTGGAAAACAAGAAAGTTACAAAATGATAGCACAAAAAATACAGTTGTCATTAAGGGTCTATTTACATGTTCACAAAAAATATGATTGTCGTTAAGGGTCTCGTTAGAGGTGTTTTTCGTCGGAGTTAGGTCGCCTGTGGTAAACATTAATGTTGGTTTTCAGAGGTGGTTGTCATCGGAGTTGATCATCGAAGGTAGTCTTTGTTAGAGTTGTCATCAAAGATGGTTGCCGGAACTCGGAGTTGGCCACGTGAAGGTGGTCATCAGAGTTGCTTGTGCGAAGGTGGTCATTAGAGTTGGTCGCCGGAGGTGGTTTTTGAAGTCCAAAGTTGGTTATTAGAGTTGGCCAGCAAAAGTGGTTGTCGAAGTATGTTGATCGACCAAAAGTGTACAAGTAATAAAGATATAGATAAAGATGGTTTAAGTGTACGAATATTGTTCCACTGAGGATTAGTGTACAACTTAATTGCGTATCTATCCTACAATTAATCAACTTTATTCAATGAATCGAAATCGAGTTTGTATTTGAATTTTGAAAACAAGTAAAGAAAGTAAAGACAAGTTAAAAATCAAGAGACAAAAGCGGTATAGGGTGTTATGTTCCTTTAATTAATCCCTTATGTGATATCTAAATTTTCATGGAATTATGCATGAGTAATATGTCTAAGTCTAGAAACTATTATCCGGATTATTTTCTCTTAAAAACAACTCTTTCTTATGCAACCTAATTGATTACTAACTTCTTGAAATCAAGTTAAGAAGCACAGGACTAAGCATAATCAACGTAACTTTCTTCACTAATCTATCTATTTTCATGAAAGATTAATAAAGATTCAATGTCATAGATCCGAATAAACATACAACCACTCAATCATATATTTAACCTAAGAATCATTGATGATCAATCAATAGAAAATAAAACACAATAGCATTGGAAAGCATACTAGTCGACAACATCCATAAAAAATACTAAATAATCAACATAAGTTCACAATTAAATTCACCAACACCCTAAAACTAAGAGTTTAGCCACACGAAGACATCAAATACATAATTTCATATGGATTTTCCAGCATAAAGATAAAGGAAAAGAACAACTTAGGAAGACAAGACTCTTGAATTGCTCCCCGATGTTGAACTCCATCAATATCCACTTGGTCGGCACCTCAAGATCTCGAGCATCCTCTAACTCTCTCCAACACTTTTTCTCCCTATTTGGTAGCAAAACATTGCTTTTAGACTATAATATTTTGTCATTGAAGGTTGCTGAACACATCGAAATATATAGAAAATCGAAAACTTGGAGGTCAAGAACTTTCCAAAATTGCATTTTTTTCTCAAATTAGGAAAGTTGGCGCTGCGGCGCACTGGGACAGCGCCACGACGCTGATCTTCATCGTTTCCTACCCTCAAGCGCTACGTCAAAGCGCTTCCTGAGCGCCACGACGCTGCCTATAGTGCGTGACGCTTTTATTTGTTCCAAATTTGATGCTCTCGGGTTTTTGCGCCGGCCTAGTGCTGCAGTGTTGCTCTGTTTTAGAGTTCTTCATATTTTTCTTCTATTTTTCATTTAGTTTTGGCTCAGTTTGGTTCTTTTGACTTATAAAACTTATTTTCTTCATTAATACCTAAAACCACTAGCAAACAACATCAAATCTAATAAAAACATCTCTAAATCAAAGGCAAATAAAGCACTTTTTAGGTGTTTTTCAAAATGCAGTTGAGATTCCCACAAAACGTTTTACTCCTTAAAATTTCCTTGATTTCACGATATAATGTATGTTATTTAAGACCATGCACGTAAACATCGGATCACCGTGAAACCTCTAGAAAGAGACCTTTAAACTCTTTCACAGAAGGAGACCACACCTGTACAATTACGTCAATTACTTCATCAAGTATGTCAAAGACAATGATACGAAAACCTTAGCGAATTGGAATTAAAAATCCTTTGTATGATAACCCCTAATTTTCAATCACTAAAACCACCAAATCGATTCGATTTCAACCCTAAGGATTAGGTTAGATACATATTGCCTTAAGATCAAATATCTTGAGACAAAGAACGAGTTCCTTGGTCGAAGATTCGAACATACTCCACAAGTTAGGATGATTAATCCAACTTGAATGCTTTTGGCATGTAATACATGAATTGCAAAATTCAAGAAAAGCTCTCTGGCTAAACTTGAAAGAGAAAGCACTAAAGTCGAAATTTAATTCATCATAAAACTTTTCAACACAACCTAATAGCGAGGCTTTATATAGTGATATGAACCGTCCCGAACATCAAATTATTATGTATGTTTTATTTGATAATTTTGATGTAATTTTAGTATTTTACAAATTTATCCATTTTATGACATATTAAGTATGAGTATTTTTATAATTTTGTTATGATTAATGATGTGACATTAGGGTTTCTCTAGGAGACTATATAAAGCCTTACCATTAAGTTGTGTTGAAAAGTTTTACTATGAATAAAATTTTAGCCTTTGTGCTTCTTTCAAGTTTAGCCAGGAAAACTTCTTGAATTTTCAAATTCACGTGTTGAGTTGCATGCTAAGAACATTCAAGTGGGATTGATCATTCTATCTTCTGTAGTGTTCGAATATTGGGTCGAGAAACTTGTTTTCTGTCTCAACATATTTGATCTTAACGCAATCCGTGTCTAATCTAATATTTAGGGTTGAAATCAAGTTGATTTTGGGGTTACGTGTTTGAGAATTAGGGGTTCATGTGTCCAAAGGGTTCCTAATTCCAATTCACTAGAGTCTTCATACCATATAGACTCCTAGTGAAACCCTAATGCCACATCACTAATTATAACAAAATTATAAAAAATACCCATACTTAATATATATGTTATAATATACATAAATTTGTAAAATACTAAAATCACATCAAAATTATTAAATAAAACATAAATAATAATTTGATGCCCGAGACAATTCAAATCAGACAAACCACTAAAAAACTTAGCTACGAAGACTTCCATGTAGTCCATACCAAAACCAACTTCATTAAGTTGTGAGAGACAAACTACTAAAAAACTGAGTTACGAAGATTTCACAATTATCCATCAAGTTCATACTAGAACTACTCAAAGAAAGGGCTATGGCTTTTTAAGGGTTTGAGTCCCATGCATACAGAGGACTCTAGAATTGTCATTTCTTGATGCGCCTGCATAAAAAATCTCGTAATTTTTCAGATTCGTGCCTAGTCATTCATAGTTGTTATTTTCTCAGTCTAAGCTCTTATTCAGCATAAAAAATGCTTGGTAAACGTTCAGAACATGATTTTCGATCATTCCTCAACCACCTTAGCCTATGTAAAGGAATGGAAGACTCTTAGATCATCATTAACCACTCCTTTGAAAAAAAAACCCACGAAAATAAACCCTAAACTCTTTAAGAACGAAAATTCCTTTAAAGAGTAGGCTTTTATAGGTCAACCCTACCCATAAAAACGTGTTGTAGAGTGGAATTCACCTTGAGAAATAAATGAATCCATCTTAGAGGATGCCTTAGTTTATTGGATTGTTTCAAAGTCACCCTCTACCGTTTTTTTTCCAATTTTCTTCTAGTTCTTTGTGAAATGATGTGAAAATTTAATGGAAATGTTTAAATGAGATTAAAAATAAATATAGTTATTTTTATGGTTTTCTTTTCAAATTCAATTTTGTTGAGAATGAAAGTTTTAGATGGAAAATAAAGATAAAAATTGATAAAAGTTAGAAGTTAGAAAAAAGTAGAACATTATCAAAGCTTCATCCTTGGTCGGAAATGACATTGACCTATGAAACTATACACTGACTCGTAAAGTTATACAATTGCATATAGTACTATAAAATTAGAAAAAGAAAAAACTTGAACTGAGCTAACATTCGAAAATTTCTCAAAATATTCTTCAAATATTACAAAAAAAAAAAAAAAAAAAAAAAATTCCACCATTGAATTTTAGACCGTGCATTTATCTCCAGCCCAGCCCATGAATCAAGTTACTCGGCCCACATTTAAGCCCACAACAGTACTTCAACGTACCCGAAACCCTAGTGTACATTTAATCTCCTTCCTCCTTATATATACCTCCTTGACTCATTTTGCCTTCTTCTGTGCACCCAATCTTACCGCCGCCGCCTGCCGATCGGCTGCTGCCGTCACGGTGAGTGTTTTTCCCCAGTCGTCTGTACTTCATTCACGTCTCCCTCTCACGTTTCATTTGAAGGTTTAAGTTTAGGGTTTGAGCCTTGTTTGCTGTTTCTGTCCTTTTTTTTGTAGGTTGCATTAGGAACGTTAGAACTCCTCTTCGTGTAGGAGCTTTCGTCTCGTCAAGATGGGTAAGTCACATACGGATTTTTGGATTTTCCTACGTATCTCTGTCTGTAACCTCGTTTCTATTTCATCTTTTTCACTAATCTTGGAGGACTCTGTGGATAGGTATCTCTCGAGATTCTATGCACAAGAGGCGTGCAACTGGAGGGAAGAAGAAGGCCTGGAGGAAGAAGAGAAAGTAACTATCTCTCCTCGTATTTATTTCTGTGCAATTTGATTGACCATTTTTACTTGATTTCCCAAAATTAGTAGCGACCACGGAATATTCTGTAATTTTCTTCATTTTTTTGCTTGGTTTCTAGCACGCATTGAGAAATTTGTAGGTTTAGCTGGAACATTGTTTTTTTTTATTGGATAGTTTTGATGTTATTGGCAAGGATTTGACATTTGTTTTCAAGTTTAACTAATCTGCGTTAGGTATCCCATCTCTTCTGTTAGGTTGATATTTTTTTATTGAATAAATTTCAAGTCGCTCAACATGTTCGCATTTTTATATTTAATTAACGGTGTAATTGGTTGTTTTTTCTCTTATCGAAGAAGAATGGAGCCCCTCTTCCAAAGTTGTTCTTATGGCGCAGTACGTACTATTAATTGTTGATGCTGATGCATAAGTAGAAACGTAACCTTCTTTAGCATGTGTGTACGAGATCTTGATACTGGAACTTAAATTATCACTGTTCACTTTCTTGTCGTGTGAATATATATCTTTCGTTTGCTGTGTGTTGCTTTTGAAGTACTCATGATATTGTTATTTGTAAAGGTATGAGCTTGGAAGGCAACCTGCCAACACTAAATTATCCAGCGACAAGTCAATCAGGAGGATTCGAGTTCGTGGGGGTAATGTGAAGTGGCGTGCCTTTAGGCTCGATACTGGAAACTACTCGTGGGGTAGTGAGGCTGTGACTAGGAAAACCCGTATTCTTGATGTGGTGTACAATGCATCAAACAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCACCATTCAAGCAGTGGTATCTTCAGCACTACGGAGTGGATATTGGAAGGAAGAAGAAGTCTGCAGCATCTGCTAAGAAGGACGAGGTAGAGCAAGCTTTTTTTTGATTTAGTAATCGATATGGTTTATTCAAATCTCAAAATATGAGTTTTAATGTGTTAAAATAAGTTCAATGGATAATGTAACAGCCCTTCTTATTAGTACATATAAACTAGTGCACGATCCATAAGATAACTTGAGTTTTATGGTTTCTAGGAAGGTGATGCTGCCGCCACCGAGGAGGTGAAGAAGAGTAACCACGTTCAGCGCAAGCTGGAGAAACGTCAAGAGGGTCGTAAGCTTGACCCACATATTGAAGAGCAATTCAGCAGTGGTCGTTTGATGGCTTGTATTTCATCAAGACCAGGTCAATGTGGTCGAGCAGATGGGTAAGCAGTGTGAAACACTCTATGATTCTGATTTATTTTCAGTTGTGTTGTTTCCAACTTGTTATAGCACACTGATTGAAGGATTTTGTAGTAATTTTGCTGTGGTTTTGCAAATTTTTGGCAGATATATCTTGGAGGGCAAAGAACTTGAATTCTACATGAAGAAGCTCCAGAGAAAGAAGGGAAAGAGTGCAGGTGCTGCTTAA

mRNA sequence

ATGACTAAGTTTTGCCTAAAGAAGTCAAAACCAAACCAAACGTCAAAAAGAGGGAGGAAAAAAAGCCAAAAGCCCAGAAAACAGGGTAGTGTCCGTGCTCCGTGGCACTACAACTTGGCATCAACCACAAAGAAGAGGTATGAGCTTGGAAGGCAACCTGCCAACACTAAATTATCCAGCGACAAGTCAATCAGGAGGATTCGAGTTCGTGGGGGTAATGTGAAGTGGCGTGCCTTTAGGCTCGATACTGGAAACTACTCGTGGGGTAGTGAGGCTGTGACTAGGAAAACCCGTATTCTTGATGTGGTGTACAATGCATCAAACAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCACCATTCAAGCAGTGGTATCTTCAGCACTACGGAGTGGATATTGGAAGGAAGAAGAAGTCTGCAGCATCTGCTAAGAAGGACGAGGAAGGTGATGCTGCCGCCACCGAGGAGGTGAAGAAGAGTAACCACGTTCAGCGCAAGCTGGAGAAACGTCAAGAGGGTCGTAAGCTTGACCCACATATTGAAGAGCAATTCAGCAGTGGTCGTTTGATGGCTTGTATTTCATCAAGACCAGGTCAATGTGGTCGAGCAGATGGATATATCTTGGAGGGCAAAGAACTTGAATTCTACATGAAGAAGCTCCAGAGAAAGAAGGGAAAGAGTGCAGGTGCTGCTTAA

Coding sequence (CDS)

ATGACTAAGTTTTGCCTAAAGAAGTCAAAACCAAACCAAACGTCAAAAAGAGGGAGGAAAAAAAGCCAAAAGCCCAGAAAACAGGGTAGTGTCCGTGCTCCGTGGCACTACAACTTGGCATCAACCACAAAGAAGAGGTATGAGCTTGGAAGGCAACCTGCCAACACTAAATTATCCAGCGACAAGTCAATCAGGAGGATTCGAGTTCGTGGGGGTAATGTGAAGTGGCGTGCCTTTAGGCTCGATACTGGAAACTACTCGTGGGGTAGTGAGGCTGTGACTAGGAAAACCCGTATTCTTGATGTGGTGTACAATGCATCAAACAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCACCATTCAAGCAGTGGTATCTTCAGCACTACGGAGTGGATATTGGAAGGAAGAAGAAGTCTGCAGCATCTGCTAAGAAGGACGAGGAAGGTGATGCTGCCGCCACCGAGGAGGTGAAGAAGAGTAACCACGTTCAGCGCAAGCTGGAGAAACGTCAAGAGGGTCGTAAGCTTGACCCACATATTGAAGAGCAATTCAGCAGTGGTCGTTTGATGGCTTGTATTTCATCAAGACCAGGTCAATGTGGTCGAGCAGATGGATATATCTTGGAGGGCAAAGAACTTGAATTCTACATGAAGAAGCTCCAGAGAAAGAAGGGAAAGAGTGCAGGTGCTGCTTAA

Protein sequence

MTKFCLKKSKPNQTSKRGRKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGAA

Homology

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BLAST of HG10003911 vs. NCBI nr
Match: XP_038884004.1 (40S ribosomal protein S8-2 [Benincasa hispida])

HSP 1 Score: 376.7 bits (966), Expect = 1.5e-100
Identity = 196/222 (88.29%), Postives = 201/222 (90.54%), Query Frame = 0


Query: 19  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 78
           R    K R  G  +  W        K++YELGRQPANTKLSSDKSIRRIRVRGGNVKWRA
Sbjct: 5   RDSMHKRRATGGKKKAWR------KKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 64

Query: 79  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 138
           FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY
Sbjct: 65  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 124

Query: 139 GVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 198
           GVDIGRKKK+AASAKKDEEGDAAA EEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL
Sbjct: 125 GVDIGRKKKTAASAKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 184

Query: 199 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGAA 241
           MACISSRPGQCGRADGYILEGKELEFYMKK+QRKKGK AGAA
Sbjct: 185 MACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 220

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BLAST of HG10003911 vs. NCBI nr
Match: XP_008466734.1 (PREDICTED: 40S ribosomal protein S8-2 [Cucumis melo] >KAA0055451.1 40S ribosomal protein S8-2 [Cucumis melo var. makuwa] >TYK08933.1 40S ribosomal protein S8-2 [Cucumis melo var. makuwa])

HSP 1 Score: 375.9 bits (964), Expect = 2.5e-100
Identity = 196/222 (88.29%), Postives = 200/222 (90.09%), Query Frame = 0


Query: 19  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 78
           R    K R  G  +  W        K++YELGRQPANTKLSSDKSIRRIRVRGGNVKWRA
Sbjct: 5   RDSMHKRRATGGKKKAWR------KKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 64

Query: 79  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 138
           FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY
Sbjct: 65  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 124

Query: 139 GVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 198
           GVDIGRKKK+AAS KKDEEGDAAA EEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL
Sbjct: 125 GVDIGRKKKTAASTKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 184

Query: 199 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGAA 241
           MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK AGAA
Sbjct: 185 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220

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BLAST of HG10003911 vs. NCBI nr
Match: XP_004149800.1 (40S ribosomal protein S8 [Cucumis sativus] >KGN47709.1 hypothetical protein Csa_018323 [Cucumis sativus])

HSP 1 Score: 370.5 bits (950), Expect = 1.1e-98
Identity = 195/224 (87.05%), Postives = 201/224 (89.73%), Query Frame = 0


Query: 19  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 78
           R    K R  G  +  W        K++YELGRQPANTKLSSDKSIRRIRVRGGNVKWRA
Sbjct: 5   RDSMHKRRATGGKKKAWR------KKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 64

Query: 79  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 138
           FRLDTGNYSWGSEAV+RKTRILDVVYNASNNELVRTQTLVKSA+VQVDAAPFKQWYLQHY
Sbjct: 65  FRLDTGNYSWGSEAVSRKTRILDVVYNASNNELVRTQTLVKSAVVQVDAAPFKQWYLQHY 124

Query: 139 GVDIGRKKKSAASAKKDEEGD--AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSG 198
           GVDIGRKKK+AASAKKDEEGD  AAA EEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSG
Sbjct: 125 GVDIGRKKKTAASAKKDEEGDAAAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSG 184

Query: 199 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGAA 241
           RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK AGAA
Sbjct: 185 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222

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BLAST of HG10003911 vs. NCBI nr
Match: KAG6578955.1 (40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367.1 bits (941), Expect = 1.2e-97
Identity = 193/223 (86.55%), Postives = 201/223 (90.13%), Query Frame = 0


Query: 19  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 78
           R    K R  G  +  W        K++YELGRQPANTK+SSDKSIRRIRVRGGNVKWRA
Sbjct: 5   RDSMHKRRATGGKKKAWR------KKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRA 64

Query: 79  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 138
           FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY
Sbjct: 65  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 124

Query: 139 GVDIGRKKKSAASAKKDEEGD-AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGR 198
           GVDIGRKKK+AASAKK+E+GD AAATEEVKKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGR
Sbjct: 125 GVDIGRKKKTAASAKKEEDGDAAAATEEVKKSNHVQRKLEKRQQERKLDPHIEEQFSSGR 184

Query: 199 LMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGAA 241
           LMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK AGAA
Sbjct: 185 LMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

[Close]

BLAST of HG10003911 vs. NCBI nr
Match: XP_022939829.1 (40S ribosomal protein S8 [Cucurbita moschata] >XP_022993929.1 40S ribosomal protein S8 [Cucurbita maxima])

HSP 1 Score: 366.7 bits (940), Expect = 1.5e-97
Identity = 193/223 (86.55%), Postives = 200/223 (89.69%), Query Frame = 0


Query: 19  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 78
           R    K R  G  +  W        K++YELGRQPANTK+SSDKSIRRIRVRGGNVKWRA
Sbjct: 5   RDSMHKRRATGGKKKAWR------KKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRA 64

Query: 79  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 138
           FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY
Sbjct: 65  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 124

Query: 139 GVDIGRKKKSAASAKKDEEGD-AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGR 198
           GVDIGRKKK+AASAKK+EEGD AAATEE KKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGR
Sbjct: 125 GVDIGRKKKTAASAKKEEEGDAAAATEEAKKSNHVQRKLEKRQQERKLDPHIEEQFSSGR 184

Query: 199 LMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGAA 241
           LMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK AGAA
Sbjct: 185 LMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

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BLAST of HG10003911 vs. ExPASy Swiss-Prot
Match: Q08069 (40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 334.0 bits (855), Expect = 1.4e-90
Identity = 176/223 (78.92%), Postives = 188/223 (84.30%), Query Frame = 0


Query: 19  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 78
           R    K R  G  +  W        K++YELGRQPANTKLSS+K++RR+RVRGGNVKWRA
Sbjct: 5   RDSMHKRRATGGKQKAWR------KKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRA 64

Query: 79  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 138
            RLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HY
Sbjct: 65  LRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHY 124

Query: 139 GVDIGRKKKSAASAKKDEEGD--AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSG 198
           GVDIGRKKK+ A+ K + EG    AA EE KKSNHV RKLEKR+EGR LDPHIEEQF SG
Sbjct: 125 GVDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSG 184

Query: 199 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGA 240
           RL+ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSA A
Sbjct: 185 RLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAVA 221

[Close]

BLAST of HG10003911 vs. ExPASy Swiss-Prot
Match: P49199 (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 332.0 bits (850), Expect = 5.5e-90
Identity = 177/223 (79.37%), Postives = 187/223 (83.86%), Query Frame = 0


Query: 19  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 78
           R    K R  G  +  W        K++YELGRQPANTKLSS+K++RR+RVRGGNVKWRA
Sbjct: 5   RDSMHKRRATGGKQKAWR------KKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRA 64

Query: 79  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 138
            RLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HY
Sbjct: 65  LRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHY 124

Query: 139 GVDIGRKKKSAASAKKDEEGD--AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSG 198
           GVDIGRKKK A +AKKD EG    A TEE KKSNHV RKLEKRQ+GR LD HIEEQF SG
Sbjct: 125 GVDIGRKKK-APAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSG 184

Query: 199 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGA 240
           RL+ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK A A
Sbjct: 185 RLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGASA 220

[Close]

BLAST of HG10003911 vs. ExPASy Swiss-Prot
Match: O81361 (40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 3.0e-88
Identity = 170/222 (76.58%), Postives = 185/222 (83.33%), Query Frame = 0


Query: 19  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 78
           R    K R  G  +  W        K++YELGRQPANTKLSS+K++RRIRVRGGNVKWRA
Sbjct: 5   RDSMHKRRATGGKKKAWR------KKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRA 64

Query: 79  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 138
            RLDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY
Sbjct: 65  LRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 124

Query: 139 GVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 198
           GV+IGRKKK+AA+ K   E   A TEE KKSNHV  KLEKRQ+GR LD HIEEQF  G+L
Sbjct: 125 GVEIGRKKKTAAAKKDTPEEGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKL 184

Query: 199 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGAA 241
           +ACISSRPGQCG+ADG ILEGKELEFYMKKLQRKKGK AGAA
Sbjct: 185 LACISSRPGQCGKADGDILEGKELEFYMKKLQRKKGKGAGAA 220

[Close]

BLAST of HG10003911 vs. ExPASy Swiss-Prot
Match: Q9FIF3 (40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 5.1e-88
Identity = 172/222 (77.48%), Postives = 185/222 (83.33%), Query Frame = 0


Query: 19  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 78
           R    K R  G  +  W        K++YELGRQPANTKLSS+K++RRIRVRGGNVKWRA
Sbjct: 5   RDSIHKRRATGGKQKMWR------KKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRA 64

Query: 79  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 138
            RLDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHY
Sbjct: 65  LRLDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHY 124

Query: 139 GVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 198
           GVDIGRKKK          G+A  TEEVKKSNHVQRKLE RQEGR LD H+EEQFSSGRL
Sbjct: 125 GVDIGRKKK----------GEAVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRL 184

Query: 199 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGAA 241
           +ACI+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK+AGAA
Sbjct: 185 LACIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]

BLAST of HG10003911 vs. ExPASy Swiss-Prot
Match: Q93VG5 (40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.5e-87
Identity = 167/223 (74.89%), Postives = 186/223 (83.41%), Query Frame = 0


Query: 19  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 78
           R    K R  G  +  W        K++YE+GRQPANTKLSS+K++RRIRVRGGNVKWRA
Sbjct: 5   RDSIHKRRATGGKQKQWR------KKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRA 64

Query: 79  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 138
            RLDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HY
Sbjct: 65  LRLDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHY 124

Query: 139 GVDIGRKKKSAASAKKD----EEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFS 198
           GV++GRKKKSA+S KKD    EE   AA EEVKKSNH+ RK+  RQEGR LD HIE+QF+
Sbjct: 125 GVELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFA 184

Query: 199 SGRLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSA 238
           SGRL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGK A
Sbjct: 185 SGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

[Close]

BLAST of HG10003911 vs. ExPASy TrEMBL
Match: A0A5D3CAQ0 (40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00210 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.2e-100
Identity = 196/222 (88.29%), Postives = 200/222 (90.09%), Query Frame = 0


Query: 19  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 78
           R    K R  G  +  W        K++YELGRQPANTKLSSDKSIRRIRVRGGNVKWRA
Sbjct: 5   RDSMHKRRATGGKKKAWR------KKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 64

Query: 79  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 138
           FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY
Sbjct: 65  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 124

Query: 139 GVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 198
           GVDIGRKKK+AAS KKDEEGDAAA EEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL
Sbjct: 125 GVDIGRKKKTAASTKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 184

Query: 199 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGAA 241
           MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK AGAA
Sbjct: 185 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220

[Close]

BLAST of HG10003911 vs. ExPASy TrEMBL
Match: A0A1S3CRZ5 (40S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103504075 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.2e-100
Identity = 196/222 (88.29%), Postives = 200/222 (90.09%), Query Frame = 0


Query: 19  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 78
           R    K R  G  +  W        K++YELGRQPANTKLSSDKSIRRIRVRGGNVKWRA
Sbjct: 5   RDSMHKRRATGGKKKAWR------KKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 64

Query: 79  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 138
           FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY
Sbjct: 65  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 124

Query: 139 GVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 198
           GVDIGRKKK+AAS KKDEEGDAAA EEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL
Sbjct: 125 GVDIGRKKKTAASTKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 184

Query: 199 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGAA 241
           MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK AGAA
Sbjct: 185 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220

[Close]

BLAST of HG10003911 vs. ExPASy TrEMBL
Match: A0A0A0KFT0 (40S ribosomal protein S8 OS=Cucumis sativus OX=3659 GN=Csa_6G382970 PE=3 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 5.1e-99
Identity = 195/224 (87.05%), Postives = 201/224 (89.73%), Query Frame = 0


Query: 19  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 78
           R    K R  G  +  W        K++YELGRQPANTKLSSDKSIRRIRVRGGNVKWRA
Sbjct: 5   RDSMHKRRATGGKKKAWR------KKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 64

Query: 79  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 138
           FRLDTGNYSWGSEAV+RKTRILDVVYNASNNELVRTQTLVKSA+VQVDAAPFKQWYLQHY
Sbjct: 65  FRLDTGNYSWGSEAVSRKTRILDVVYNASNNELVRTQTLVKSAVVQVDAAPFKQWYLQHY 124

Query: 139 GVDIGRKKKSAASAKKDEEGD--AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSG 198
           GVDIGRKKK+AASAKKDEEGD  AAA EEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSG
Sbjct: 125 GVDIGRKKKTAASAKKDEEGDAAAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSG 184

Query: 199 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGAA 241
           RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK AGAA
Sbjct: 185 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222

[Close]

BLAST of HG10003911 vs. ExPASy TrEMBL
Match: A0A6J1K1I2 (40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111489780 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 7.4e-98
Identity = 193/223 (86.55%), Postives = 200/223 (89.69%), Query Frame = 0


Query: 19  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 78
           R    K R  G  +  W        K++YELGRQPANTK+SSDKSIRRIRVRGGNVKWRA
Sbjct: 5   RDSMHKRRATGGKKKAWR------KKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRA 64

Query: 79  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 138
           FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY
Sbjct: 65  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 124

Query: 139 GVDIGRKKKSAASAKKDEEGD-AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGR 198
           GVDIGRKKK+AASAKK+EEGD AAATEE KKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGR
Sbjct: 125 GVDIGRKKKTAASAKKEEEGDAAAATEEAKKSNHVQRKLEKRQQERKLDPHIEEQFSSGR 184

Query: 199 LMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGAA 241
           LMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK AGAA
Sbjct: 185 LMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

[Close]

BLAST of HG10003911 vs. ExPASy TrEMBL
Match: A0A6J1FIB1 (40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111445587 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 7.4e-98
Identity = 193/223 (86.55%), Postives = 200/223 (89.69%), Query Frame = 0


Query: 19  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 78
           R    K R  G  +  W        K++YELGRQPANTK+SSDKSIRRIRVRGGNVKWRA
Sbjct: 5   RDSMHKRRATGGKKKAWR------KKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRA 64

Query: 79  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 138
           FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY
Sbjct: 65  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 124

Query: 139 GVDIGRKKKSAASAKKDEEGD-AAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGR 198
           GVDIGRKKK+AASAKK+EEGD AAATEE KKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGR
Sbjct: 125 GVDIGRKKKTAASAKKEEEGDAAAATEEAKKSNHVQRKLEKRQQERKLDPHIEEQFSSGR 184

Query: 199 LMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGAA 241
           LMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK AGAA
Sbjct: 185 LMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

[Close]

BLAST of HG10003911 vs. TAIR 10
Match: AT5G59240.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 325.5 bits (833), Expect = 3.6e-89
Identity = 172/222 (77.48%), Postives = 185/222 (83.33%), Query Frame = 0


Query: 19  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 78
           R    K R  G  +  W        K++YELGRQPANTKLSS+K++RRIRVRGGNVKWRA
Sbjct: 5   RDSIHKRRATGGKQKMWR------KKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRA 64

Query: 79  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 138
            RLDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHY
Sbjct: 65  LRLDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHY 124

Query: 139 GVDIGRKKKSAASAKKDEEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 198
           GVDIGRKKK          G+A  TEEVKKSNHVQRKLE RQEGR LD H+EEQFSSGRL
Sbjct: 125 GVDIGRKKK----------GEAVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRL 184

Query: 199 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGAA 241
           +ACI+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK+AGAA
Sbjct: 185 LACIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]

BLAST of HG10003911 vs. TAIR 10
Match: AT5G20290.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 323.2 bits (827), Expect = 1.8e-88
Identity = 167/223 (74.89%), Postives = 186/223 (83.41%), Query Frame = 0


Query: 19  RKKSQKPRKQGSVRAPWHYNLASTTKKRYELGRQPANTKLSSDKSIRRIRVRGGNVKWRA 78
           R    K R  G  +  W        K++YE+GRQPANTKLSS+K++RRIRVRGGNVKWRA
Sbjct: 5   RDSIHKRRATGGKQKQWR------KKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRA 64

Query: 79  FRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 138
            RLDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HY
Sbjct: 65  LRLDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHY 124

Query: 139 GVDIGRKKKSAASAKKD----EEGDAAATEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFS 198
           GV++GRKKKSA+S KKD    EE   AA EEVKKSNH+ RK+  RQEGR LD HIE+QF+
Sbjct: 125 GVELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFA 184

Query: 199 SGRLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSA 238
           SGRL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGK A
Sbjct: 185 SGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

The following BLAST results are available for this feature:

BLAST of HG10003911 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884004.1	1.5e-100	88.29	40S ribosomal protein S8-2 [Benincasa hispida]	[more]
XP_008466734.1	2.5e-100	88.29	PREDICTED: 40S ribosomal protein S8-2 [Cucumis melo] >KAA0055451.1 40S ribosomal...	[more]
XP_004149800.1	1.1e-98	87.05	40S ribosomal protein S8 [Cucumis sativus] >KGN47709.1 hypothetical protein Csa_...	[more]
KAG6578955.1	1.2e-97	86.55	40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022939829.1	1.5e-97	86.55	40S ribosomal protein S8 [Cucurbita moschata] >XP_022993929.1 40S ribosomal prot...	[more]

BLAST of HG10003911 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q08069	1.4e-90	78.92	40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2	[more]
P49199	5.5e-90	79.37	40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 S...	[more]
O81361	3.0e-88	76.58	40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1	[more]
Q9FIF3	5.1e-88	77.48	40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1	[more]
Q93VG5	2.5e-87	74.89	40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1	[more]

BLAST of HG10003911 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CAQ0	1.2e-100	88.29	40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CRZ5	1.2e-100	88.29	40S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103504075 PE=3 SV=1	[more]
A0A0A0KFT0	5.1e-99	87.05	40S ribosomal protein S8 OS=Cucumis sativus OX=3659 GN=Csa_6G382970 PE=3 SV=1	[more]
A0A6J1K1I2	7.4e-98	86.55	40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111489780 PE=3 SV=1	[more]
A0A6J1FIB1	7.4e-98	86.55	40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111445587 PE=3 SV=1	[more]

BLAST of HG10003911 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59240.1	3.6e-89	77.48	Ribosomal protein S8e family protein	[more]
AT5G20290.1	1.8e-88	74.89	Ribosomal protein S8e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022309	Ribosomal protein S8e/ribosomal biogenesis NSA2	PFAM	PF01201	Ribosomal_S8e	coord: 28..217 e-value: 1.2E-44 score: 151.8
IPR001047	Ribosomal protein S8e	TIGRFAM	TIGR00307	TIGR00307	coord: 42..219 e-value: 6.3E-37 score: 124.5
IPR001047	Ribosomal protein S8e	PANTHER	PTHR10394	40S RIBOSOMAL PROTEIN S8	coord: 41..238
None	No IPR available	GENE3D	3.10.290.70		coord: 52..182 e-value: 2.2E-39 score: 136.3 coord: 183..235 e-value: 2.0E-17 score: 65.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..27
None	No IPR available	PANTHER	PTHR10394:SF18	40S RIBOSOMAL PROTEIN S8	coord: 41..238
None	No IPR available	CDD	cd11380	Ribosomal_S8e_like	coord: 24..217 e-value: 9.9069E-56 score: 173.089

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10003911.1	HG10003911.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome