HG10018648.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10018648.1
TypemRNA
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr04: 6277769 .. 6279345 (+)
Sequence length297
RNA-Seq ExpressionHG10018648.1
SyntenyHG10018648.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAACTGCAGTCAGTACGCCAACCAATGCAGTAACGGCCAAGGCCACACTAGGAAGGGGAGACGTTACTCCAAAATTCTGCATCATGAAAACAGTGATTCTGGTAAGGTTTCAGTTAATTTAATGCTGTATCTCCTATAAAATTTGTCTGACATGACACTGAGAATTCCTCTAACTGGAGAAATTAAACAAATGGGAAACAACCAGCCTAGAATAATTAGACGGTCACTTTTATATCAGGCCAAAATCAATCAGGCAGATGCCGCACATCCAATGATCAGCCTAGAATAATTCAATGGTCACTTTTATATCAAGCCAAAATCATCAAGACAAGTGTCTGAAAATAAAAATGCCAGAGTAACAAAAAAAGCCATTGGAATACATTCTAGATACATTTTGAGAGTCTTCTTTACAACAACTCAACACTTCAAATAGAATACTCCAAGTGGTACAAAATGATACTTTTGTATAAATAATTAGGGAGAAGATAATTTCCTAAACAGAAAATATGAAACCTGATATCAAATGAACACAACCGAACCTCACATTGGAGCTAGTATCTTATTAACAATAACAATTAGGTCTTTACAATAAGATAAGCCGAATTCAAGATTCCAAAAGCTAAAGAAATCCTTAAACAATTTCTTATCAGCTATCAGAAATATAAGTAATAATGACTTTGGAAGGTCATACCTCTAAAAGTCCCTTTCCTGTTGCTATTTCAACACTAATTGCAATTGCAAATCCTACCATCGCAAACCGCCCAAGCCAAACATCCAGATTGCTCTGTTGGGTACTTTGCTCACATCTTATAGAAACAGAATTATATTTCAGTGCGTGCTTCTTTTGACCAGATGGCTTGCTTAACACTAGGAACAATTGTAACCATTAGCTGACACTTAATAAAATCAAGTTGAATCTATTGCTTCCTTAGCCAAAATCCAGAAAGAATTCAAAAATTGCAATTACCATACAATTTTCTAAACACTCCAGCTTACAATTTCCTAATATTCCAATTATAGTCAACAGTAATCATGAAATTAATTACGTTAGAATGGAAGTCGCATTAGATCGCTTAGACTAGAACTTGTGCAATATTTCTTTCTTAACAGTCACAATTCGCAAACAACAAGAAAACCACATAGGTAACATCCTGATTTTATTTAGATGTTAGGGCAGTTCAATGTTCATTACCAGAATTCATAATATACTCCACTGAAAACTTGAAATTGAAACTCCAACATAAAATTGAACTGAAGAACTCTAGAACTCAACAATAAATCAAGAAGAAACATTCGAAGTAGACGGATAATAGACATAATAAAAATCTGTACCAAGTGGAGAGCCAGTAGCGAACGTCGTTCCGATTCGGTATAAATTCAGGAAAGGACCTCTGTGAAGTGGAAAGACTTTTGGTGCTGTTCTTGCGAAGGAAGCATCTGCAACATTGTTTTGGATTATGAATCGTTTGGATGGATATTCAACAATCACAGAACAGAAGAGCGAGATGGAGAAGCTGTGAGAAAGATAAAGAGAGTACCCCGTGTGCCGAGAGAGAGAGAGGCGGAAGCATGA

mRNA sequence

ATGAAAACTGCAGTCAGTACGCCAACCAATGCAGTAACGGCCAAGGCCACACTAGGAAGGGGAGACGTTACTCCAAAATTCTGCATCATGAAAACAGTGATTCTGGAAAGGACCTCTGTGAAGTGGAAAGACTTTTGGTGCTGTTCTTGCGAAGGAAGCATCTGCAACATTGTTTTGGATTATGAATCGTTTGGATGGATATTCAACAATCACAGAACAGAAGAGCGAGATGGAGAAGCTGTGAGAAAGATAAAGAGAGTACCCCGTGTGCCGAGAGAGAGAGAGGCGGAAGCATGA

Coding sequence (CDS)

ATGAAAACTGCAGTCAGTACGCCAACCAATGCAGTAACGGCCAAGGCCACACTAGGAAGGGGAGACGTTACTCCAAAATTCTGCATCATGAAAACAGTGATTCTGGAAAGGACCTCTGTGAAGTGGAAAGACTTTTGGTGCTGTTCTTGCGAAGGAAGCATCTGCAACATTGTTTTGGATTATGAATCGTTTGGATGGATATTCAACAATCACAGAACAGAAGAGCGAGATGGAGAAGCTGTGAGAAAGATAAAGAGAGTACCCCGTGTGCCGAGAGAGAGAGAGGCGGAAGCATGA

Protein sequence

MKTAVSTPTNAVTAKATLGRGDVTPKFCIMKTVILERTSVKWKDFWCCSCEGSICNIVLDYESFGWIFNNHRTEERDGEAVRKIKRVPRVPREREAEA
Homology
The following BLAST results are available for this feature:
BLAST of HG10018648.1 vs.
Match NameE-valueIdentityDescription
BLAST of HG10018648.1 vs.
Match NameE-valueIdentityDescription
BLAST of HG10018648.1 vs.
Match NameE-valueIdentityDescription
BLAST of HG10018648.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
HG10018648HG10018648gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
HG10018648.1-cdsHG10018648.1-cds-Chr04:6277769..6277873CDS
HG10018648.1-cdsHG10018648.1-cds-Chr04:6279154..6279345CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
HG10018648.1HG10018648.1-proteinpolypeptide