Sed0020085 (gene) Chayote v1

Overview


Name	Sed0020085
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Inhibitor of trypsin and hageman factor-like
Location	LG02: 50050962 .. 50051392 (-)
RNA-Seq Expression	Sed0020085
Synteny	Sed0020085

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTACTTCATGTACAGGTACATTATGTTAATATGATTTCATGATGGTGCTTAATAATTTCTTTTGTACATCTCTCGAATTTTCTATTAAATAGACATGAGCTTACATTTCAAAAATTGATTAACATGAAAAGAGTAATTCATGTATCTTTACAATTTTCAATGTAAGATCTTCAATATTATACATTGTTATATATAAACTAACTATTCTTTTTTTTTGACGTGTTCAGGAAAGAGCTCGTGGCCCGAGTTGGTCGGTCGACCGGGGAGGGAGGCAGAGAGGACTATCGAGAACGAAAACCGCTTGGTTGATGCTATAATTGTAATCGATGGCCAGTCAAATGTGCCTTTCGACTTTAGGTGTGACAGGGTTTGGGTTTGGGTAAGCGAGACAACCAACAATGTTGTTAGGACTCCTTTCATTGGTTAG

mRNA sequence

ATGTCTACTTCATGTACAGGAAAGAGCTCGTGGCCCGAGTTGGTCGGTCGACCGGGGAGGGAGGCAGAGAGGACTATCGAGAACGAAAACCGCTTGGTTGATGCTATAATTGTAATCGATGGCCAGTCAAATGTGCCTTTCGACTTTAGGTGTGACAGGGTTTGGGTTTGGGTAAGCGAGACAACCAACAATGTTGTTAGGACTCCTTTCATTGGTTAG

Coding sequence (CDS)

ATGTCTACTTCATGTACAGGAAAGAGCTCGTGGCCCGAGTTGGTCGGTCGACCGGGGAGGGAGGCAGAGAGGACTATCGAGAACGAAAACCGCTTGGTTGATGCTATAATTGTAATCGATGGCCAGTCAAATGTGCCTTTCGACTTTAGGTGTGACAGGGTTTGGGTTTGGGTAAGCGAGACAACCAACAATGTTGTTAGGACTCCTTTCATTGGTTAG

Protein sequence

MSTSCTGKSSWPELVGRPGREAERTIENENRLVDAIIVIDGQSNVPFDFRCDRVWVWVSETTNNVVRTPFIG

Homology

[Close]

BLAST of Sed0020085 vs. NCBI nr
Match: KAG6582360.1 (hypothetical protein SDJN03_22362, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 109.8 bits (273), Expect = 1.0e-20
Identity = 52/70 (74.29%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 3  TSCTGKSSWPELVGRPGREAERTIENENRLVDAIIVIDGQSNVPFDFRCDRVWVWVSETT 62
          +SC GKSSWPELVG+ G++AE+ IE EN LVDAIIV +G SNVPFDFRCDRVWVWVS TT
Sbjct: 2  SSCEGKSSWPELVGKVGKDAEKIIEKENPLVDAIIVDEG-SNVPFDFRCDRVWVWVSPTT 61

Query: 63 NNVVRTPFIG 73
            V RTP IG
Sbjct: 62 KIVTRTPVIG 70

[Close]

BLAST of Sed0020085 vs. NCBI nr
Match: KAA0049295.1 (inhibitor of trypsin and hageman factor-like [Cucumis melo var. makuwa] >TYK17263.1 inhibitor of trypsin and hageman factor-like [Cucumis melo var. makuwa])

HSP 1 Score: 104.8 bits (260), Expect = 3.3e-19
Identity = 52/72 (72.22%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 1  MSTSCTGKSSWPELVGRPGREAERTIENENRLVDAIIVIDGQSNVPFDFRCDRVWVWVSE 60
          MST+C GKSSWPELVG+ G+EAE+TIE EN LVDAIIV +G S V  DFRCDRVWVWV  
Sbjct: 1  MSTTCKGKSSWPELVGKAGKEAEKTIERENPLVDAIIVDEG-SVVIQDFRCDRVWVWVDP 60

Query: 61 TTNNVVRTPFIG 73
           T  V RTPFIG
Sbjct: 61 KTAIVTRTPFIG 71

[Close]

BLAST of Sed0020085 vs. NCBI nr
Match: KAG6582359.1 (hypothetical protein SDJN03_22361, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 104.0 bits (258), Expect = 5.6e-19
Identity = 51/72 (70.83%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 1  MSTSCTGKSSWPELVGRPGREAERTIENENRLVDAIIVIDGQSNVPFDFRCDRVWVWVSE 60
          MST+C GKSSWPELVG+ G+EAER IE EN LVDAI+V +G S V  DFRCDRVWVWV+ 
Sbjct: 1  MSTTCKGKSSWPELVGKDGKEAERIIEKENPLVDAIVVDEG-SVVIQDFRCDRVWVWVTV 60

Query: 61 TTNNVVRTPFIG 73
           T  V RTPFIG
Sbjct: 61 KTGIVTRTPFIG 71

[Close]

BLAST of Sed0020085 vs. NCBI nr
Match: XP_004134090.1 (glu S.griseus protease inhibitor [Cucumis sativus])

HSP 1 Score: 102.1 bits (253), Expect = 2.1e-18
Identity = 49/72 (68.06%), Postives = 56/72 (77.78%), Query Frame = 0


Query: 1  MSTSCTGKSSWPELVGRPGREAERTIENENRLVDAIIVIDGQSNVPFDFRCDRVWVWVSE 60
          MST+C GKSSWPELVG+ G+EAE+ IE EN  VDA+IV +G S V  DFRCDRVWVWV  
Sbjct: 1  MSTTCKGKSSWPELVGKAGKEAEKIIEKENPSVDAVIVDEG-SVVTQDFRCDRVWVWVDS 60

Query: 61 TTNNVVRTPFIG 73
           T+ V RTPFIG
Sbjct: 61 KTSIVTRTPFIG 71

[Close]

BLAST of Sed0020085 vs. NCBI nr
Match: KAE8650342.1 (hypothetical protein Csa_009611 [Cucumis sativus])

HSP 1 Score: 102.1 bits (253), Expect = 2.1e-18
Identity = 49/72 (68.06%), Postives = 56/72 (77.78%), Query Frame = 0


Query: 1  MSTSCTGKSSWPELVGRPGREAERTIENENRLVDAIIVIDGQSNVPFDFRCDRVWVWVSE 60
          MST+C GKSSWPELVG+ G+EAE+ IE EN  VDA+IV +G S V  DFRCDRVWVWV  
Sbjct: 1  MSTTCKGKSSWPELVGKAGKEAEKIIEKENPSVDAVIVDEG-SVVTQDFRCDRVWVWVDS 60

Query: 61 TTNNVVRTPFIG 73
           T+ V RTPFIG
Sbjct: 61 KTSIVTRTPFIG 71

[Close]

BLAST of Sed0020085 vs. ExPASy Swiss-Prot
Match: P82381 (Proteinase inhibitor OS=Linum usitatissimum OX=4006 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 7.6e-11
Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 2  STSCTGKSSWPELVGRPGREAERTIENENRLVDAIIVIDGQSNVPFDFRCDRVWVWVSE 61
          S  C GK++WPELVG+ G  A  T+E ENR V AI++ +G S +  DFRCDRVWV V++
Sbjct: 1  SRRCPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEG-SAMTKDFRCDRVWVIVND 58

[Close]

BLAST of Sed0020085 vs. ExPASy Swiss-Prot
Match: P24076 (Glu S.griseus protease inhibitor OS=Momordica charantia OX=3673 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 9.9e-11
Identity = 38/70 (54.29%), Postives = 43/70 (61.43%), Query Frame = 0


Query: 3  TSCTGKSSWPELVGRPGREAERTIENENRLVDAIIVIDGQSNVPFDFRCDRVWVWVSETT 62
          + C GK SWP+LVG  G  A+  IE EN  V A+IV  G S V  DFRCDRV VWV+E  
Sbjct: 1  SQCQGKRSWPQLVGSTGAAAKAVIERENPRVRAVIVRVG-SPVTADFRCDRVRVWVTE-R 60

Query: 63 NNVVRTPFIG 73
            V R P IG
Sbjct: 61 GIVARPPAIG 68

[Close]

BLAST of Sed0020085 vs. ExPASy Swiss-Prot
Match: P19873 (Inhibitor of trypsin and hageman factor OS=Cucurbita maxima OX=3661 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 7.1e-09
Identity = 34/70 (48.57%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 3  TSCTGKSSWPELVGRPGREAERTIENENRLVDAIIVIDGQSNVPFDFRCDRVWVWVSETT 62
          +SC GKSSWP LVG  G  A+  IE +N  V A+I+ +G + V  DFRC+RV +WV++  
Sbjct: 1  SSCPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEG-TPVTKDFRCNRVRIWVNK-R 60

Query: 63 NNVVRTPFIG 73
            VV  P IG
Sbjct: 61 GLVVSPPRIG 68

[Close]

BLAST of Sed0020085 vs. ExPASy Swiss-Prot
Match: P86971 (Trypsin inhibitor OS=Fagopyrum tataricum OX=62330 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 6.0e-08
Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 7  GKSSWPELVGRPGREAERTIENENRLVDAII---VIDGQSNVPFDFRCDRVWVWVSETTN 66
          GK SWPELVG  G+ A  TI+ EN  V A++   +    +   FDFRCDRV V ++    
Sbjct: 18 GKQSWPELVGTKGKTAAATIDKENTHVTAVLCPPLTTLAACRTFDFRCDRVRVLINRIGG 77

Query: 67 NVVRTPFIG 73
           V +TP +G
Sbjct: 78 VVTKTPTVG 86

[Close]

BLAST of Sed0020085 vs. ExPASy Swiss-Prot
Match: Q00783 (Proteinase inhibitor 1 OS=Solanum tuberosum OX=4113 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.1e-06
Identity = 27/68 (39.71%), Postives = 37/68 (54.41%), Query Frame = 0


Query: 5   CTGKSSWPELVGRPGREAERTIENENRLVDAIIVIDGQSNVPFDFRCDRVWVWVSETTNN 64
           C GK  WPEL+G P + A+  IE EN L+  + ++   S V  D RCDRV ++       
Sbjct: 41  CKGKLRWPELIGVPTKLAKGIIEKENSLISNVHILLNGSPVTLDIRCDRVRLF-DNILGY 100

Query: 65  VVRTPFIG 73
           VV  P +G
Sbjct: 101 VVDIPVVG 107

[Close]

BLAST of Sed0020085 vs. ExPASy TrEMBL
Match: A0A5D3CZE2 (Inhibitor of trypsin and hageman factor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001160 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.6e-19
Identity = 52/72 (72.22%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 1  MSTSCTGKSSWPELVGRPGREAERTIENENRLVDAIIVIDGQSNVPFDFRCDRVWVWVSE 60
          MST+C GKSSWPELVG+ G+EAE+TIE EN LVDAIIV +G S V  DFRCDRVWVWV  
Sbjct: 1  MSTTCKGKSSWPELVGKAGKEAEKTIERENPLVDAIIVDEG-SVVIQDFRCDRVWVWVDP 60

Query: 61 TTNNVVRTPFIG 73
           T  V RTPFIG
Sbjct: 61 KTAIVTRTPFIG 71

[Close]

BLAST of Sed0020085 vs. ExPASy TrEMBL
Match: A0A0A0L795 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G142960 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.0e-18
Identity = 49/72 (68.06%), Postives = 56/72 (77.78%), Query Frame = 0


Query: 1  MSTSCTGKSSWPELVGRPGREAERTIENENRLVDAIIVIDGQSNVPFDFRCDRVWVWVSE 60
          MST+C GKSSWPELVG+ G+EAE+ IE EN  VDA+IV +G S V  DFRCDRVWVWV  
Sbjct: 1  MSTTCKGKSSWPELVGKAGKEAEKIIEKENPSVDAVIVDEG-SVVTQDFRCDRVWVWVDS 60

Query: 61 TTNNVVRTPFIG 73
           T+ V RTPFIG
Sbjct: 61 KTSIVTRTPFIG 71

[Close]

BLAST of Sed0020085 vs. ExPASy TrEMBL
Match: A0A1R3K1Z8 (Proteinase inhibitor I13, potato inhibitor I OS=Corchorus olitorius OX=93759 GN=COLO4_12160 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.3e-17
Identity = 46/72 (63.89%), Postives = 53/72 (73.61%), Query Frame = 0


Query: 1  MSTSCTGKSSWPELVGRPGREAERTIENENRLVDAIIVIDGQSNVPFDFRCDRVWVWVSE 60
          M++ C GKSSWPELVG  G EAE TIE EN LVDA IV+ G+++V  DFRCDRVWVWV +
Sbjct: 1  MASKCQGKSSWPELVGVKGEEAEATIEKENPLVDARIVVKGRNSVTMDFRCDRVWVWVDD 60

Query: 61 TTNNVVRTPFIG 73
              VV  PFIG
Sbjct: 61 -AGYVVDVPFIG 71

[Close]

BLAST of Sed0020085 vs. ExPASy TrEMBL
Match: A0A1R3KDU9 (Proteinase inhibitor I13, potato inhibitor I OS=Corchorus capsularis OX=210143 GN=CCACVL1_01996 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 7.3e-17
Identity = 46/72 (63.89%), Postives = 52/72 (72.22%), Query Frame = 0


Query: 1  MSTSCTGKSSWPELVGRPGREAERTIENENRLVDAIIVIDGQSNVPFDFRCDRVWVWVSE 60
          M++ C GKSSWPELVG  G EAE TIE EN LVDA IV+ G+ +V  DFRCDRVWVWV +
Sbjct: 1  MASECQGKSSWPELVGVKGEEAEATIEKENPLVDAKIVVKGRDSVTTDFRCDRVWVWVDD 60

Query: 61 TTNNVVRTPFIG 73
              VV  PFIG
Sbjct: 61 -AGYVVDVPFIG 71

[Close]

BLAST of Sed0020085 vs. ExPASy TrEMBL
Match: A0A5N6MCE0 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_33846 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 7.3e-17
Identity = 47/72 (65.28%), Postives = 54/72 (75.00%), Query Frame = 0


Query: 1  MSTSCTGKSSWPELVGRPGREAERTIENENRLVDAIIVIDGQSNVPFDFRCDRVWVWVSE 60
          MS +C GKSSWPELVG  G  AE TIE EN  VDAI+V+DG + VP DFRCDRVWVWV+ 
Sbjct: 1  MSINCQGKSSWPELVGVRGEVAEATIERENPRVDAIVVVDG-TVVPLDFRCDRVWVWVN- 60

Query: 61 TTNNVVRTPFIG 73
          +   V+RTP IG
Sbjct: 61 SNGEVIRTPVIG 70

[Close]

BLAST of Sed0020085 vs. TAIR 10
Match: AT5G43580.1 (Serine protease inhibitor, potato inhibitor I-type family protein )

HSP 1 Score: 65.9 bits (159), Expect = 1.6e-11
Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 7  GKSSWPELVGRPGREAERTIENENRLVDAIIVIDGQSNVPFDFRCDRVWVWVSETTNNVV 66
          GKSSWPEL+G  G +A+  IE EN  + A+I++DG + VP  F C RV+VWV++    VV
Sbjct: 36 GKSSWPELLGAKGEDAKEVIERENPKMKAVIILDG-TVVPEIFICSRVYVWVND-CGIVV 95

Query: 67 RTPFIG 73
          + P IG
Sbjct: 96 QIPIIG 99

[Close]

BLAST of Sed0020085 vs. TAIR 10
Match: AT2G38870.1 (Serine protease inhibitor, potato inhibitor I-type family protein )

HSP 1 Score: 65.5 bits (158), Expect = 2.0e-11
Identity = 37/72 (51.39%), Postives = 45/72 (62.50%), Query Frame = 0


Query: 1  MSTSCTGKSSWPELVGRPGREAERTIENENRLVDAIIVIDGQSNVPFDFRCDRVWVWVSE 60
          MST C  K+SWPEL G  G  A   IE EN  V+A +++DG S V  DFRCDRV V+V +
Sbjct: 1  MSTECPRKNSWPELTGTNGDYAAVVIERENPTVNAAVILDG-SPVTADFRCDRVRVFV-D 60

Query: 61 TTNNVVRTPFIG 73
              VV+TP  G
Sbjct: 61 GNRIVVKTPKSG 70

[Close]

BLAST of Sed0020085 vs. TAIR 10
Match: AT5G43570.1 (Serine protease inhibitor, potato inhibitor I-type family protein )

HSP 1 Score: 47.4 bits (111), Expect = 5.8e-06
Identity = 29/62 (46.77%), Postives = 37/62 (59.68%), Query Frame = 0


Query: 8  KSSWPELVGRPGREAERTIENENRLVDAIIVIDGQSNVPFDFRCDRVWVWVSETTNNVVR 67
          KSSWPELVGR G E +  I+ EN  V A I+ +  + V     CDRV+V V++    V R
Sbjct: 14 KSSWPELVGRRGEEVKEIIDRENTKVTAKIISE-NAVVLAVVICDRVYVRVND-QGIVTR 73

Query: 68 TP 70
          TP
Sbjct: 74 TP 73

The following BLAST results are available for this feature:

BLAST of Sed0020085 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6582360.1	1.0e-20	74.29	hypothetical protein SDJN03_22362, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0049295.1	3.3e-19	72.22	inhibitor of trypsin and hageman factor-like [Cucumis melo var. makuwa] >TYK1726...	[more]
KAG6582359.1	5.6e-19	70.83	hypothetical protein SDJN03_22361, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_004134090.1	2.1e-18	68.06	glu S.griseus protease inhibitor [Cucumis sativus]	[more]
KAE8650342.1	2.1e-18	68.06	hypothetical protein Csa_009611 [Cucumis sativus]	[more]

BLAST of Sed0020085 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82381	7.6e-11	54.24	Proteinase inhibitor OS=Linum usitatissimum OX=4006 PE=1 SV=1	[more]
P24076	9.9e-11	54.29	Glu S.griseus protease inhibitor OS=Momordica charantia OX=3673 PE=1 SV=1	[more]
P19873	7.1e-09	48.57	Inhibitor of trypsin and hageman factor OS=Cucurbita maxima OX=3661 PE=1 SV=1	[more]
P86971	6.0e-08	43.48	Trypsin inhibitor OS=Fagopyrum tataricum OX=62330 PE=1 SV=1	[more]
Q00783	1.1e-06	39.71	Proteinase inhibitor 1 OS=Solanum tuberosum OX=4113 PE=3 SV=1	[more]

BLAST of Sed0020085 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CZE2	1.6e-19	72.22	Inhibitor of trypsin and hageman factor-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A0A0L795	1.0e-18	68.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G142960 PE=3 SV=1	[more]
A0A1R3K1Z8	3.3e-17	63.89	Proteinase inhibitor I13, potato inhibitor I OS=Corchorus olitorius OX=93759 GN=...	[more]
A0A1R3KDU9	7.3e-17	63.89	Proteinase inhibitor I13, potato inhibitor I OS=Corchorus capsularis OX=210143 G...	[more]
A0A5N6MCE0	7.3e-17	65.28	Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_33846 PE=3 SV=1	[more]

BLAST of Sed0020085 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43580.1	1.6e-11	50.00	Serine protease inhibitor, potato inhibitor I-type family protein	[more]
AT2G38870.1	2.0e-11	51.39	Serine protease inhibitor, potato inhibitor I-type family protein	[more]
AT5G43570.1	5.8e-06	46.77	Serine protease inhibitor, potato inhibitor I-type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PRINTS	PR00292	POTATOINHBTR	coord: 48..58 score: 52.57 coord: 10..23 score: 52.17
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PFAM	PF00280	potato_inhibit	coord: 8..72 e-value: 7.9E-23 score: 80.9
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PANTHER	PTHR33091	PROTEIN, PUTATIVE, EXPRESSED-RELATED	coord: 3..72
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PROSITE	PS00285	POTATO_INHIBITOR	coord: 11..22
None	No IPR available	GENE3D	3.30.10.10	Trypsin Inhibitor V, subunit A	coord: 1..71 e-value: 1.8E-24 score: 87.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR33091:SF41	SERINE PROTEASE INHIBITOR, POTATO INHIBITOR I-TYPE FAMILY PROTEIN-RELATED	coord: 3..72
IPR036354	Proteinase inhibitor I13, potato inhibitor I superfamily	SUPERFAMILY	54654	CI-2 family of serine protease inhibitors	coord: 4..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020085.1	Sed0020085.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010951	negative regulation of endopeptidase activity
biological_process	GO:0009611	response to wounding
molecular_function	GO:0004867	serine-type endopeptidase inhibitor activity