Sed0003757 (gene) Chayote v1

Overview


Name	Sed0003757
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Signal peptidase complex subunit 3
Location	LG11: 2886557 .. 2890022 (+)
RNA-Seq Expression	Sed0003757
Synteny	Sed0003757

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGTAGTGTTGTCCAATAAAAATTGGCAAATCTCTATTCTCTCTCTGCCCTGTTGGAGACTCCATTTCGTTTCCAAGTCTCCCAGAATTGTTTCTCTGTCATCCATTGAATTGAAAAGATGCATTCATTTGGGCTCAGAGCCAACGCTGTGGTGACCTTCGCCGCCACAATACTCGCCGTCGTTTGTGCTTTCGCTTCCTTTTCCGATACTCTCAATTCCCCTTCACCCACAGCCCAAGTTCAGGTCTCTCTCTTCTTCTTCTTTCTGGGTTTTTTCCCCTTTTCCTTTCAGATCTGTGGCTTTGATTCGAGACCCATTTGGTGATTTCATTTGGGTTTCTTGTTTTCTGGGTGTGTTAGGTTTTGAGCATCAACTGGTTTCAAAATCAACCCAATGGGAACGATGAGGTTTGATCTTTATTGGCTTTCTTTCTTTTACCATGTGATGAAATGGGGTTTTGTTTTGTTGGATTGTGTCTGTTTCTTTTCTCTTAGTTTGTGGATATTTGTATGAGAAGAAGGATTTTGAGGTTATTTGAGGGGATGAATTGGAACATTTGTGCAATTGAGTTTATGGAAAATGTCCCCAAGGTATGCTTCTATTGGTGCTTCTTTGGAGATCTCAGGTTTGAGACCCACAAATTAAACTTAATGGTAAAATCTCTTGTTGTCTCCCGAGTATAGGCTTTGGATGGACGTGACTACCCTGGATATATGGGAGGGAAGCTCCGATTCCCGGTCATCAAAAGAAAATTGGGTTTATGGAAAAATGGCTGGGAAAAAGACTAAAATAGGTTATTGGAGACAGGGTAGAGCGTCTAGCTTAGAAGATTAGACTAAAATAGGTTATTGAGTGCATGGGCCAACTTACTCTACACGACCCTACAACATTTGAATGTCAAGAAAATTCATAAGAAATCATTTTCGAGTTTGGTGGTTACCATAAATTGAACTCATCACCCCTTTGTTACTTATGGCACTGTTGATCAATGGTCCACTAGGTCACTCATGATAGTTGGCTACAAACCATAATGTGGTTGTTTGAATCCTTTCTCGCCCTCAACTAGCCAAAGATGGAAGATTTTTACCCTTGACCATAGGAAAATCATGGTTGGGGATATTTAGTTGAGCTTTCATCCTCGTAGGATTAAGATTAGCCCCATGTTTTGCTTAGTGTTCTAGTTTTCAATACAATCAAATGTTGTTTCTTCTTATAATCTTATCTGAAGGCAATTCGTGTTTCTCATAGATATATGATGGTGGGGTGGCTGCAATCTAGATTACGGATCTTCTGATTTCATCAAGTGATTACTTAACTCTTTAGTCATTTAAAATCTGAGCTAGTTCTGCCCCCTAGGTTGAGGCTTGGAGCTTGGAGGTCTCAAGTTTGAGCCTTACAAATGAGTTGAATTGTAAAATCCTTTGTTGTCTCCTAGGTTCGGGTCTTGAGATGAGCGAGGGTGCCCCCAGGTATAGTGGAGAGCGAAGCTCTGATTTCTCGGTTAAAAAAAAATCTTAGCTAGATTGGTTACTTGATGCATCTTGGGCTACATTAATAATGCATTTCAATTTTCAAAGCTTATGAAGTGTGATTTATTGAATACATTATATGCATGGATATGTCTCATGGAATAGTATAACAAGGGTTTTTTTTTTCCACTCATGTGTACTAAAAAAAGTAAAGAAAATCAAAGAAAGTCGAAGAGAACATTCCTTGCAAGAACGACTATGAGCTTATTATCTTTATCACAAAACAAGGTAATCACTTTTTCTTGATTATTTGAAAGAATGCTTCTTCTTTTTGCAGGTTAGCATGACTTTTAACATATCTGCAGATTTGCAGTCATTATTTACGTGGAATACAAAGCAGGTGCCGTGCAAGCAACCTATTTTTTTCTTTTGTATTTTTTACCTCAAAGTCCTTAGTAATCTGGTTGGTTAATTCAGAAATATGATAGTGTTATATAATAAGCTCATAGAACTAGCAGGAATTCGTTTTTCTAGTCACATAAGGGCCAGGAGGGTCATAGTCGAGAAAGAATTCGGAGGCGGCCCATCCCTCCTGAACTCTAGCCGAGACTTTGCTTATAAAGTACCCACTCCATCATAATCCTTTTTGCTACATACTCTCTGATTGGCGTCCCTCCACCAATCTAACTGATTAGTTGTATCAAACTCACTTCTTATGTCTGCACCAAATGCTAAGCCAATCACCCTTGCATTTCTTACTACTTTATTTATGCTTTTAACTGTCTGCTATCAAGAGCTATTATAAGCGTCATACGAATTTTCGTTAGGCCTGAAGTTGATAGCATATTTAAGTGCACGTTTATTTTGGAGCCATCGTTCTCAACCATTTTGTAATTATAGTCTCACTGTTATATTAAATCAATGGCAAAGCTTTCTGTAACTTCCGATAGACCATCTTTTGTATATTTTCATATATCAATGAAAGTTTCTTGTTTTGTATAAAAAAAAGAAAGAAAGAAGCCATCTTGCCTTTGTTTGTGTGTTTATGAAAGTCGTTCAAGTTAACGACAGTGAAGGAAATCGGGCTTTATCAGATTATATTTATATTTAATAAACTATGATAAAACTTTTATTTCTTGAGATTTGTGGGTGTTATACTTATACACTTATATTGTACCAAGCAGTGAACTGAATGGATAATTTCATTTTATGTGCAACAGGTTTTTGTGTTTCTTGCGGCTGAATATGAAACCCCAAAGAACTCCTTGAATCAGGTTAGTTTCTGTTTCTTATTTGGACATATATTTCAGTACAATATTATCTTAACCCCGTGTTGACTGTTCAGTTTCGTCTCTTTTGGCGACTGAACGTGCCTTAAACTTTTCCTTCTGCTTGGTTACGTATGCTTCAATTTAATCACTTTCTGAAATGTCGTTTGCAGATCTCACTATGGGACGGTATCATACCTTCCAAAGAGATCGCAAAGTTTCAGATCCATACGTCAAACAAGTATCGTTTCGCTGACCAGGTTTGTCACCTCCGATTCTGTTACAAAACTTAGCCAACCAATCTATGATGAGTATAATTTTTAGCCAAGAGTGAAAAAGTTGTAATTTTCATTATGCAGGGAAGCAATCTGAGAGGTAAAAAGTTTAACTTGACATTGCACTGGCATGTGATGCCAAAGACAGGCAAGATGTTAGCAGACAAGTTGGTGATGTCTGGATATCGCTTGCCACAAGAATATAGATGAGGAAATTTCTCCATTGATTTGTAATTTCTGAACTAAGTTTTGCATAGGCTTTAGCATCAGATTAAATCAACAACATTACAAACACTGCAACATTTCATGGATGGAATAGGAAGATGAGGAATTTTGTTGTATGCCATTTTTCAAGCCATGAATTCATCAGGCTTAAATGAATTGATATTTGGCTTTTTTTACCCTACATCTCTCTCAATTGCAGTCTTCATAATGGAAAAACGTTATAGATTC

mRNA sequence

GGGTAGTGTTGTCCAATAAAAATTGGCAAATCTCTATTCTCTCTCTGCCCTGTTGGAGACTCCATTTCGTTTCCAAGTCTCCCAGAATTGTTTCTCTGTCATCCATTGAATTGAAAAGATGCATTCATTTGGGCTCAGAGCCAACGCTGTGGTGACCTTCGCCGCCACAATACTCGCCGTCGTTTGTGCTTTCGCTTCCTTTTCCGATACTCTCAATTCCCCTTCACCCACAGCCCAAGTTCAGGTTTTGAGCATCAACTGGTTTCAAAATCAACCCAATGGGAACGATGAGGTTAGCATGACTTTTAACATATCTGCAGATTTGCAGTCATTATTTACGTGGAATACAAAGCAGGTTTTTGTGTTTCTTGCGGCTGAATATGAAACCCCAAAGAACTCCTTGAATCAGATCTCACTATGGGACGGTATCATACCTTCCAAAGAGATCGCAAAGTTTCAGATCCATACGTCAAACAAGTATCGTTTCGCTGACCAGGGAAGCAATCTGAGAGGTAAAAAGTTTAACTTGACATTGCACTGGCATGTGATGCCAAAGACAGGCAAGATGTTAGCAGACAAGTTGGTGATGTCTGGATATCGCTTGCCACAAGAATATAGATGAGGAAATTTCTCCATTGATTTGTAATTTCTGAACTAAGTTTTGCATAGGCTTTAGCATCAGATTAAATCAACAACATTACAAACACTGCAACATTTCATGGATGGAATAGGAAGATGAGGAATTTTGTTGTATGCCATTTTTCAAGCCATGAATTCATCAGGCTTAAATGAATTGATATTTGGCTTTTTTTACCCTACATCTCTCTCAATTGCAGTCTTCATAATGGAAAAACGTTATAGATTC

Coding sequence (CDS)

ATGCATTCATTTGGGCTCAGAGCCAACGCTGTGGTGACCTTCGCCGCCACAATACTCGCCGTCGTTTGTGCTTTCGCTTCCTTTTCCGATACTCTCAATTCCCCTTCACCCACAGCCCAAGTTCAGGTTTTGAGCATCAACTGGTTTCAAAATCAACCCAATGGGAACGATGAGGTTAGCATGACTTTTAACATATCTGCAGATTTGCAGTCATTATTTACGTGGAATACAAAGCAGGTTTTTGTGTTTCTTGCGGCTGAATATGAAACCCCAAAGAACTCCTTGAATCAGATCTCACTATGGGACGGTATCATACCTTCCAAAGAGATCGCAAAGTTTCAGATCCATACGTCAAACAAGTATCGTTTCGCTGACCAGGGAAGCAATCTGAGAGGTAAAAAGTTTAACTTGACATTGCACTGGCATGTGATGCCAAAGACAGGCAAGATGTTAGCAGACAAGTTGGTGATGTCTGGATATCGCTTGCCACAAGAATATAGATGA

Protein sequence

MHSFGLRANAVVTFAATILAVVCAFASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVSMTFNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEIAKFQIHTSNKYRFADQGSNLRGKKFNLTLHWHVMPKTGKMLADKLVMSGYRLPQEYR

Homology

[Close]

BLAST of Sed0003757 vs. NCBI nr
Match: XP_008454895.1 (PREDICTED: signal peptidase complex subunit 3B [Cucumis melo] >AAO45754.1 signal peptidase protein-like protein [Cucumis melo subsp. melo] >KAA0047947.1 signal peptidase complex subunit 3B [Cucumis melo var. makuwa] >TYK18328.1 signal peptidase complex subunit 3B [Cucumis melo var. makuwa])

HSP 1 Score: 323.2 bits (827), Expect = 1.4e-84
Identity = 156/167 (93.41%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MHSFGLRANAVVTFAATILAVVCAFASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFG RANA++TFAATILAV+CA ASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS
Sbjct: 1   MHSFGFRANALLTFAATILAVICALASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  MTFNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           MT NISADLQSLFTWNTKQVFVFLAAEYETP NSLNQISLWDGI+PSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPSNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFADQGSNLRGKKFNLTLHWHVMPKTGKMLADKLVMSGYRLPQEYR 168
           YRF DQGSNLRGK+FNLTLHWHVMPKTGKM ADKLVMSGYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 167

[Close]

BLAST of Sed0003757 vs. NCBI nr
Match: XP_038888523.1 (signal peptidase complex subunit 3B-like [Benincasa hispida])

HSP 1 Score: 321.6 bits (823), Expect = 3.9e-84
Identity = 156/167 (93.41%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 1   MHSFGLRANAVVTFAATILAVVCAFASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFG RAN ++TFAATILAV+CA ASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS
Sbjct: 1   MHSFGFRANVLLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  MTFNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           MT NISADLQSLFTWNTKQVFVFLAAEYETP NSLNQISLWDGIIPSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPMNSLNQISLWDGIIPSKEIAKFQIHTSNK 120

Query: 121 YRFADQGSNLRGKKFNLTLHWHVMPKTGKMLADKLVMSGYRLPQEYR 168
           YRF DQGSNLRGK+FNLTLHWHVMPKTGKM ADKLVMSGYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 167

[Close]

BLAST of Sed0003757 vs. NCBI nr
Match: XP_004139189.1 (signal peptidase complex subunit 3B [Cucumis sativus] >KAE8651592.1 hypothetical protein Csa_023454 [Cucumis sativus])

HSP 1 Score: 320.5 bits (820), Expect = 8.8e-84
Identity = 155/167 (92.81%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MHSFGLRANAVVTFAATILAVVCAFASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFG RANA++TFAATILAV+CAFASFSDTLNSPSPTAQVQVLSINWFQ QPNGNDEVS
Sbjct: 1   MHSFGFRANALLTFAATILAVICAFASFSDTLNSPSPTAQVQVLSINWFQKQPNGNDEVS 60

Query: 61  MTFNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           MT NISADLQSLFTWNTKQVFVFLAAEYETP NSLNQISLWDGI+PSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPLNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFADQGSNLRGKKFNLTLHWHVMPKTGKMLADKLVMSGYRLPQEYR 168
           YRF DQGSNLRGK+FNLTLHWHVMPKTGKM A+KLVMSGYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 167

[Close]

BLAST of Sed0003757 vs. NCBI nr
Match: XP_022946298.1 (signal peptidase complex subunit 3B [Cucurbita moschata] >XP_023545834.1 signal peptidase complex subunit 3B [Cucurbita pepo subsp. pepo] >KAG6599260.1 Signal peptidase complex subunit 3B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 317.4 bits (812), Expect = 7.4e-83
Identity = 154/167 (92.22%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 1   MHSFGLRANAVVTFAATILAVVCAFASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFG RANA++TFAATILAV+CA ASFSDTLNSPSPTAQVQVLSINWFQ+QPNGNDEVS
Sbjct: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60

Query: 61  MTFNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           MT NISADLQSLFTWNTKQVFVFLAAEYETP NSLNQISLWDGIIPSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120

Query: 121 YRFADQGSNLRGKKFNLTLHWHVMPKTGKMLADKLVMSGYRLPQEYR 168
           YRF DQGSNLRGK+FNLTLHWHVMPKTGKM ADKLVMSGY LP+EYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 167

[Close]

BLAST of Sed0003757 vs. NCBI nr
Match: XP_022999140.1 (signal peptidase complex subunit 3B [Cucurbita maxima])

HSP 1 Score: 315.8 bits (808), Expect = 2.2e-82
Identity = 154/167 (92.22%), Postives = 159/167 (95.21%), Query Frame = 0


Query: 1   MHSFGLRANAVVTFAATILAVVCAFASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFG RANA++TFAATILAV+CA ASFSDTLNSPSPTAQVQVLSINWFQ QPNGNDEVS
Sbjct: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQCQPNGNDEVS 60

Query: 61  MTFNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           MT NISADLQSLFTWNTKQVFVFLAAEYETP NSLNQISLWDGIIPSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120

Query: 121 YRFADQGSNLRGKKFNLTLHWHVMPKTGKMLADKLVMSGYRLPQEYR 168
           YRF DQGSNLRGK+FNLTLHWHVMPKTGKM ADKLVMSGY LP+EYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 167

[Close]

BLAST of Sed0003757 vs. ExPASy Swiss-Prot
Match: Q53YF3 (Signal peptidase complex subunit 3B OS=Arabidopsis thaliana OX=3702 GN=At5g27430 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.0e-71
Identity = 127/167 (76.05%), Postives = 144/167 (86.23%), Query Frame = 0


Query: 1   MHSFGLRANAVVTFAATILAVVCAFASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFG RANA++TFA TILA +CA ASFSD  ++ +P+AQ+Q+L+INWFQ QP+GNDEVS
Sbjct: 1   MHSFGYRANALLTFAVTILAFICAIASFSDNFSNQNPSAQIQILNINWFQKQPHGNDEVS 60

Query: 61  MTFNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           +T NI+ADLQSLFTWNTKQVF F+AAEYET KN+LNQ+SLWD IIP KE AKF I  SNK
Sbjct: 61  LTLNITADLQSLFTWNTKQVFAFVAAEYETSKNALNQVSLWDAIIPEKEHAKFWIQISNK 120

Query: 121 YRFADQGSNLRGKKFNLTLHWHVMPKTGKMLADKLVMSGYRLPQEYR 168
           YRF DQG NLRGK FNLTLHWHVMPKTGKM ADK+VMSGYRLP  YR
Sbjct: 121 YRFIDQGHNLRGKDFNLTLHWHVMPKTGKMFADKIVMSGYRLPNAYR 167

[Close]

BLAST of Sed0003757 vs. ExPASy Swiss-Prot
Match: Q9MA96 (Signal peptidase complex subunit 3A OS=Arabidopsis thaliana OX=3702 GN=At3g05230 PE=2 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 7.0e-68
Identity = 121/167 (72.46%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 1   MHSFGLRANAVVTFAATILAVVCAFASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MH+FG RANA++TFA T LA +CA ASFSD  ++ +P+A++Q+L+IN F+ Q +GNDEVS
Sbjct: 1   MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVS 60

Query: 61  MTFNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           +T +ISADLQSLFTWNTKQVFVF+AAEYETPKNSLNQ+SLWD IIP+KE AKF+I  SNK
Sbjct: 61  LTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKEHAKFRIQVSNK 120

Query: 121 YRFADQGSNLRGKKFNLTLHWHVMPKTGKMLADKLVMSGYRLPQEYR 168
           YRF DQG NLRGK FNLTLHWHVMPKTGKM ADK+V+ GY LP  YR
Sbjct: 121 YRFIDQGQNLRGKDFNLTLHWHVMPKTGKMFADKIVLPGYSLPDAYR 167

[Close]

BLAST of Sed0003757 vs. ExPASy Swiss-Prot
Match: Q9LGB4 (Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0131800 PE=3 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 4.3e-33
Identity = 77/166 (46.39%), Postives = 91/166 (54.82%), Query Frame = 0


Query: 1   MHSFGLRANAVVTFAATILAVVCAFASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHS+  R     T AA +L   C  AS  D  + PS  AQ  V  IN F  Q NGND   
Sbjct: 1   MHSWVQRLLTTATTAALLLLAACCAASALDAFHVPSVQAQAHVTKINRFHKQLNGND--- 60

Query: 61  MTFNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEIAKFQIHTSNK 120
                             +VFVFL AEYE  KNSLNQ+SLWD IIP K+ A  Q+   +K
Sbjct: 61  ------------------KVFVFLTAEYENSKNSLNQVSLWDHIIPDKDKANLQVEVKSK 120

Query: 121 YRFADQGSNLRGKKFNLTLHWHVMPKTGKMLADKLVMSGYRLPQEY 167
           Y   DQGS+LRGKK  L LHWHVMPK G M+ D++ +S + LP  Y
Sbjct: 121 YPLIDQGSSLRGKKVQLVLHWHVMPKAGVMIRDRMALSEFNLPDSY 145

[Close]

BLAST of Sed0003757 vs. ExPASy Swiss-Prot
Match: P28687 (Signal peptidase complex subunit 3 OS=Gallus gallus OX=9031 GN=SPC22 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.5e-17
Identity = 54/149 (36.24%), Postives = 86/149 (57.72%), Query Frame = 0


Query: 7   RANAVVTFAATILAVV---CAFASFSDTLNSPSPTA--QVQVLSINWFQNQPNGNDEVSM 66
           RAN++  F+ +++A +   C   +     + P   A  +V + ++  F      +D   +
Sbjct: 7   RANSLFAFSLSVMAALTFGCFITTAFKERSVPVSIAVSRVTLRNVEDFTGPRERSDLAFV 66

Query: 67  TFNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEIAK-FQIHTSNK 126
           TF+I+ADLQS+F WN KQ+F++L+AEY T  N+LNQ+ LWD II   +  + F     +K
Sbjct: 67  TFDITADLQSIFDWNVKQLFLYLSAEYSTKNNALNQVVLWDKIILRGDNPRLFLKDMKSK 126

Query: 127 YRFADQGSNLRG-KKFNLTLHWHVMPKTG 149
           Y F D G+ L+G +   LTL W+V+P  G
Sbjct: 127 YFFFDDGNGLKGNRNVTLTLSWNVVPNAG 155

[Close]

BLAST of Sed0003757 vs. ExPASy Swiss-Prot
Match: B0G180 (Signal peptidase complex subunit 3 OS=Dictyostelium discoideum OX=44689 GN=spcs3 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.5e-17
Identity = 50/166 (30.12%), Postives = 85/166 (51.20%), Query Frame = 0


Query: 1   MHSFGLRANAVVTFAATILAVVCAFASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHS   RAN +V F   +L  V      S    S      +++  I+ F  Q N  +   
Sbjct: 1   MHSLSQRANTIVCFGGIVLVGVLLLNVLSRAFFSDHVDVDIKLNEIHRFNTQRN-FEYSF 60

Query: 61  MTFNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           ++ ++ A+L+ LF WNTK +F+++ AEY T +N L+Q+ +WD I+  K  A       +K
Sbjct: 61  ISIDLDANLEPLFNWNTKMLFLYVTAEYRTKQNVLSQVVVWDHILTEKSKANIHEKRLSK 120

Query: 121 YRFADQGSNLRGKKFNLTLHWHVMPKTGKMLADKLVMSGYRLPQEY 167
           Y   +QG  L+     LT +++V+P +G +   ++  S ++ P  Y
Sbjct: 121 YPIINQGLGLKNNTIKLTFNYNVVPISGILTRHQVGTSEFKFPTTY 165

[Close]

BLAST of Sed0003757 vs. ExPASy TrEMBL
Match: A0A5A7U155 (Signal peptidase complex subunit 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00390 PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.5e-85
Identity = 156/167 (93.41%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MHSFGLRANAVVTFAATILAVVCAFASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFG RANA++TFAATILAV+CA ASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS
Sbjct: 1   MHSFGFRANALLTFAATILAVICALASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  MTFNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           MT NISADLQSLFTWNTKQVFVFLAAEYETP NSLNQISLWDGI+PSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPSNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFADQGSNLRGKKFNLTLHWHVMPKTGKMLADKLVMSGYRLPQEYR 168
           YRF DQGSNLRGK+FNLTLHWHVMPKTGKM ADKLVMSGYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 167

[Close]

BLAST of Sed0003757 vs. ExPASy TrEMBL
Match: Q84KA8 (Signal peptidase complex subunit 3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.5e-85
Identity = 156/167 (93.41%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MHSFGLRANAVVTFAATILAVVCAFASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFG RANA++TFAATILAV+CA ASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS
Sbjct: 1   MHSFGFRANALLTFAATILAVICALASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  MTFNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           MT NISADLQSLFTWNTKQVFVFLAAEYETP NSLNQISLWDGI+PSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPSNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFADQGSNLRGKKFNLTLHWHVMPKTGKMLADKLVMSGYRLPQEYR 168
           YRF DQGSNLRGK+FNLTLHWHVMPKTGKM ADKLVMSGYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 167

[Close]

BLAST of Sed0003757 vs. ExPASy TrEMBL
Match: A0A1S3BZ61 (Signal peptidase complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103495199 PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.5e-85
Identity = 156/167 (93.41%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MHSFGLRANAVVTFAATILAVVCAFASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFG RANA++TFAATILAV+CA ASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS
Sbjct: 1   MHSFGFRANALLTFAATILAVICALASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  MTFNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           MT NISADLQSLFTWNTKQVFVFLAAEYETP NSLNQISLWDGI+PSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPSNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFADQGSNLRGKKFNLTLHWHVMPKTGKMLADKLVMSGYRLPQEYR 168
           YRF DQGSNLRGK+FNLTLHWHVMPKTGKM ADKLVMSGYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 167

[Close]

BLAST of Sed0003757 vs. ExPASy TrEMBL
Match: A0A6J1G3E6 (Signal peptidase complex subunit 3 OS=Cucurbita moschata OX=3662 GN=LOC111450422 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 3.6e-83
Identity = 154/167 (92.22%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 1   MHSFGLRANAVVTFAATILAVVCAFASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFG RANA++TFAATILAV+CA ASFSDTLNSPSPTAQVQVLSINWFQ+QPNGNDEVS
Sbjct: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60

Query: 61  MTFNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           MT NISADLQSLFTWNTKQVFVFLAAEYETP NSLNQISLWDGIIPSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120

Query: 121 YRFADQGSNLRGKKFNLTLHWHVMPKTGKMLADKLVMSGYRLPQEYR 168
           YRF DQGSNLRGK+FNLTLHWHVMPKTGKM ADKLVMSGY LP+EYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 167

[Close]

BLAST of Sed0003757 vs. ExPASy TrEMBL
Match: A0A6J1KEG9 (Signal peptidase complex subunit 3 OS=Cucurbita maxima OX=3661 GN=LOC111493612 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.0e-82
Identity = 154/167 (92.22%), Postives = 159/167 (95.21%), Query Frame = 0


Query: 1   MHSFGLRANAVVTFAATILAVVCAFASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFG RANA++TFAATILAV+CA ASFSDTLNSPSPTAQVQVLSINWFQ QPNGNDEVS
Sbjct: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQCQPNGNDEVS 60

Query: 61  MTFNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           MT NISADLQSLFTWNTKQVFVFLAAEYETP NSLNQISLWDGIIPSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120

Query: 121 YRFADQGSNLRGKKFNLTLHWHVMPKTGKMLADKLVMSGYRLPQEYR 168
           YRF DQGSNLRGK+FNLTLHWHVMPKTGKM ADKLVMSGY LP+EYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 167

[Close]

BLAST of Sed0003757 vs. TAIR 10
Match: AT5G27430.1 (Signal peptidase subunit )

HSP 1 Score: 270.8 bits (691), Expect = 7.4e-73
Identity = 127/167 (76.05%), Postives = 144/167 (86.23%), Query Frame = 0


Query: 1   MHSFGLRANAVVTFAATILAVVCAFASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFG RANA++TFA TILA +CA ASFSD  ++ +P+AQ+Q+L+INWFQ QP+GNDEVS
Sbjct: 1   MHSFGYRANALLTFAVTILAFICAIASFSDNFSNQNPSAQIQILNINWFQKQPHGNDEVS 60

Query: 61  MTFNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           +T NI+ADLQSLFTWNTKQVF F+AAEYET KN+LNQ+SLWD IIP KE AKF I  SNK
Sbjct: 61  LTLNITADLQSLFTWNTKQVFAFVAAEYETSKNALNQVSLWDAIIPEKEHAKFWIQISNK 120

Query: 121 YRFADQGSNLRGKKFNLTLHWHVMPKTGKMLADKLVMSGYRLPQEYR 168
           YRF DQG NLRGK FNLTLHWHVMPKTGKM ADK+VMSGYRLP  YR
Sbjct: 121 YRFIDQGHNLRGKDFNLTLHWHVMPKTGKMFADKIVMSGYRLPNAYR 167

[Close]

BLAST of Sed0003757 vs. TAIR 10
Match: AT3G05230.1 (Signal peptidase subunit )

HSP 1 Score: 258.1 bits (658), Expect = 5.0e-69
Identity = 121/167 (72.46%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 1   MHSFGLRANAVVTFAATILAVVCAFASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MH+FG RANA++TFA T LA +CA ASFSD  ++ +P+A++Q+L+IN F+ Q +GNDEVS
Sbjct: 1   MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVS 60

Query: 61  MTFNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           +T +ISADLQSLFTWNTKQVFVF+AAEYETPKNSLNQ+SLWD IIP+KE AKF+I  SNK
Sbjct: 61  LTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKEHAKFRIQVSNK 120

Query: 121 YRFADQGSNLRGKKFNLTLHWHVMPKTGKMLADKLVMSGYRLPQEYR 168
           YRF DQG NLRGK FNLTLHWHVMPKTGKM ADK+V+ GY LP  YR
Sbjct: 121 YRFIDQGQNLRGKDFNLTLHWHVMPKTGKMFADKIVLPGYSLPDAYR 167

[Close]

BLAST of Sed0003757 vs. TAIR 10
Match: AT3G05230.2 (Signal peptidase subunit )

HSP 1 Score: 188.0 bits (476), Expect = 6.3e-48
Identity = 89/126 (70.63%), Postives = 109/126 (86.51%), Query Frame = 0


Query: 1   MHSFGLRANAVVTFAATILAVVCAFASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MH+FG RANA++TFA T LA +CA ASFSD  ++ +P+A++Q+L+IN F+ Q +GNDEVS
Sbjct: 1   MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVS 60

Query: 61  MTFNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           +T +ISADLQSLFTWNTKQVFVF+AAEYETPKNSLNQ+SLWD IIP+KE AKF+I  SNK
Sbjct: 61  LTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKEHAKFRIQVSNK 120

Query: 121 YRFADQ 127
           YRF DQ
Sbjct: 121 YRFIDQ 126

The following BLAST results are available for this feature:

BLAST of Sed0003757 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454895.1	1.4e-84	93.41	PREDICTED: signal peptidase complex subunit 3B [Cucumis melo] >AAO45754.1 signal...	[more]
XP_038888523.1	3.9e-84	93.41	signal peptidase complex subunit 3B-like [Benincasa hispida]	[more]
XP_004139189.1	8.8e-84	92.81	signal peptidase complex subunit 3B [Cucumis sativus] >KAE8651592.1 hypothetical...	[more]
XP_022946298.1	7.4e-83	92.22	signal peptidase complex subunit 3B [Cucurbita moschata] >XP_023545834.1 signal ...	[more]
XP_022999140.1	2.2e-82	92.22	signal peptidase complex subunit 3B [Cucurbita maxima]	[more]

BLAST of Sed0003757 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q53YF3	1.0e-71	76.05	Signal peptidase complex subunit 3B OS=Arabidopsis thaliana OX=3702 GN=At5g27430...	[more]
Q9MA96	7.0e-68	72.46	Signal peptidase complex subunit 3A OS=Arabidopsis thaliana OX=3702 GN=At3g05230...	[more]
Q9LGB4	4.3e-33	46.39	Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp. japonica OX=3...	[more]
P28687	1.5e-17	36.24	Signal peptidase complex subunit 3 OS=Gallus gallus OX=9031 GN=SPC22 PE=1 SV=1	[more]
B0G180	1.5e-17	30.12	Signal peptidase complex subunit 3 OS=Dictyostelium discoideum OX=44689 GN=spcs3...	[more]

BLAST of Sed0003757 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U155	6.5e-85	93.41	Signal peptidase complex subunit 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
Q84KA8	6.5e-85	93.41	Signal peptidase complex subunit 3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV...	[more]
A0A1S3BZ61	6.5e-85	93.41	Signal peptidase complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103495199 PE=3 ...	[more]
A0A6J1G3E6	3.6e-83	92.22	Signal peptidase complex subunit 3 OS=Cucurbita moschata OX=3662 GN=LOC111450422...	[more]
A0A6J1KEG9	1.0e-82	92.22	Signal peptidase complex subunit 3 OS=Cucurbita maxima OX=3661 GN=LOC111493612 P...	[more]

BLAST of Sed0003757 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27430.1	7.4e-73	76.05	Signal peptidase subunit	[more]
AT3G05230.1	5.0e-69	72.46	Signal peptidase subunit	[more]
AT3G05230.2	6.3e-48	70.63	Signal peptidase subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007653	Signal peptidase complex subunit 3	PIRSF	PIRSF016089	SPC3	coord: 1..167 e-value: 4.3E-44 score: 148.1
IPR007653	Signal peptidase complex subunit 3	PFAM	PF04573	SPC22	coord: 6..164 e-value: 1.7E-54 score: 183.9
IPR007653	Signal peptidase complex subunit 3	PANTHER	PTHR12804	MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23	coord: 1..167
None	No IPR available	PANTHER	PTHR12804:SF11	SIGNAL PEPTIDASE COMPLEX SUBUNIT 3	coord: 1..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003757.1	Sed0003757.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045047	protein targeting to ER
biological_process	GO:0006465	signal peptide processing
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005787	signal peptidase complex
molecular_function	GO:0004252	serine-type endopeptidase activity