Moc09g08200 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g08200
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Titin-like isoform X2
Location	chr9: 6564734 .. 6566254 (+)
RNA-Seq Expression	Moc09g08200
Synteny	Moc09g08200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGATGAGTTGCCCACCTCTTGACCAAGAGAATGGCTTGCCTGAGTACATGTTCGGGGACAAAAACTTGGAAGGGAAAATCGACTACATTGTGAAACTACTCGAAGCACATGGCCATTCCTTAAACTCAATAAAGGCTGAGGTACAAGTGCCTATCATTTTTTTCTGTTACATTATTAGGTTGGGTGATTTTGCTCATTAATTGGTGAAAAACAGGTTATTAAGAAATCCTCCTCGATGGAAACAGTACCGACACCTGATATGAAGTACAAGAGCATGTATATAGCATCCCAGAAGAAGGTTATGTTTAGTCATTTCCATCCTCTGATTCTTTTTTTCAACTCTTCTTCAGGCCAACTTGAGTTCATTAAGAAACCGTGTTCATTTTTGCGGTTATTTTCTTATGTGCAGATTGAAGAACTAGCTGAAGAAATCCAAGTGCTAACTCAAAAATTGGAATCCACTCGAGACCAATTTGAAGCAGTATGTATTATCAAATTCCATCTCTACTATCTTAGTTATGAAACTAGGAATGGACAACTTTTTTTATTCTTGAAAGGAACAAAAGACACCTTTTATTGATAGAATTAAAAGATTAAAAGAATATATCCCAAAAGAAAACTAGAACTTATAAAAAGAGCACCCTAGCTCATTGGAATTAGAAATGCACGTTGACTTGAGACTTTAGCCTAAAACCAAGTTGGTAAGCGTTTCCTTTAGAACAACAATCCTAGTAATCAAAAAGCCGAAGTTATATTTACTCCAAGAACACTCGAGAAGTGTTCAACTTCCAGCATAAGGACTAAAGAGTCGCTTCCAGATTGGTACTTCTCGTGTCAGATCGAAAACAAAACTTTCAGCCCTCACACCCCCTCAGGAAAAAGTGACTTAGAATACAAAATTTTGTATACAGGATGTCTATTGATCTGATCTCTATATGTGGACAAAGTATCAAAAGCAGTGGATCCTCAAGTGATTCAAAGATATTAGCTAACCAAGTTTTTTTTTTTTTTTACATTTTTCTTATAATTTTATGTGTCAATTATGTTACGATTTTAAGAAGTTTAAAATGCCATTAAACTTTAGATGGTATAATGCATGTATTTTTTAGCTCAACAAGTGTTGAGCTGGAGGATTGAACTTGAAACTTTAAAAAGGTAATAGGTAATTATCCACCGAACTATGCTCAAACTAACTGATCCGATCCTAGTAAGGAAGCTAATTAATACCAAAAATGAGTTAAATCCTATATTCAATCAAGTAATTGAGAGCAAAATACGACATTTAGGGAGAGCTTTGGAAATAATTTAATCTGTAGTACTCATCAATGTATGTCAAATACTTCTTACCGTGGCTAGCAGCATCATCCACACGTAGCTTGTGAATTTGGCTGGGCTGATTGTAAATTCATGATTCATTTGAGAAGACAGCTAAAACACCACATCAAACTGATATTGCACCAGAAAAAACTCTCAAGATTCTGCAACCTGCTGAGAAAATTCCCGAAACTCAATAG

mRNA sequence

ATGGAGAAGATGAGTTGCCCACCTCTTGACCAAGAGAATGGCTTGCCTGAGTACATGTTCGGGGACAAAAACTTGGAAGGGAAAATCGACTACATTGTGAAACTACTCGAAGCACATGGCCATTCCTTAAACTCAATAAAGGCTGAGGTTATTAAGAAATCCTCCTCGATGGAAACAGTACCGACACCTGATATGAAGTACAAGAGCATGTATATAGCATCCCAGAAGAAGATTGAAGAACTAGCTGAAGAAATCCAAGTGCTAACTCAAAAATTGGAATCCACTCGAGACCAATTTGAAGCAACAGCTAAAACACCACATCAAACTGATATTGCACCAGAAAAAACTCTCAAGATTCTGCAACCTGCTGAGAAAATTCCCGAAACTCAATAG

Coding sequence (CDS)

ATGGAGAAGATGAGTTGCCCACCTCTTGACCAAGAGAATGGCTTGCCTGAGTACATGTTCGGGGACAAAAACTTGGAAGGGAAAATCGACTACATTGTGAAACTACTCGAAGCACATGGCCATTCCTTAAACTCAATAAAGGCTGAGGTTATTAAGAAATCCTCCTCGATGGAAACAGTACCGACACCTGATATGAAGTACAAGAGCATGTATATAGCATCCCAGAAGAAGATTGAAGAACTAGCTGAAGAAATCCAAGTGCTAACTCAAAAATTGGAATCCACTCGAGACCAATTTGAAGCAACAGCTAAAACACCACATCAAACTGATATTGCACCAGAAAAAACTCTCAAGATTCTGCAACCTGCTGAGAAAATTCCCGAAACTCAATAG

Protein sequence

MEKMSCPPLDQENGLPEYMFGDKNLEGKIDYIVKLLEAHGHSLNSIKAEVIKKSSSMETVPTPDMKYKSMYIASQKKIEELAEEIQVLTQKLESTRDQFEATAKTPHQTDIAPEKTLKILQPAEKIPETQ

Homology

[Close]

BLAST of Moc09g08200 vs. NCBI nr
Match: XP_022150152.1 (uncharacterized protein LOC111018403 [Momordica charantia] >XP_022150153.1 uncharacterized protein LOC111018403 [Momordica charantia])

HSP 1 Score: 179.5 bits (454), Expect = 1.9e-41
Identity = 96/119 (80.67%), Postives = 101/119 (84.87%), Query Frame = 0


Query: 2   EKMSCPPLDQENGLPEYMFGDKNLEGKIDYIVKLLEAHGHSLNSIKAEVIKKSSSMETVP 61
           ++ S PPLDQENG PEYMF DKNLEGKIDYIVKLLEAHGHSLNSIKAEVIKKSSSMETVP
Sbjct: 98  KEKSLPPLDQENGWPEYMFEDKNLEGKIDYIVKLLEAHGHSLNSIKAEVIKKSSSMETVP 157

Query: 62  TPDMKYKSMYIASQKKIEELAEEIQVLTQKLESTRDQFEATAKTPHQTDIAPEKTLKIL 121
           TPDMKYKSMYIASQKKIEELAEEIQ LTQKLESTRDQFEA        + A EK   ++
Sbjct: 158 TPDMKYKSMYIASQKKIEELAEEIQELTQKLESTRDQFEAYKMGARDVNEALEKMKDVI 216

[Close]

BLAST of Moc09g08200 vs. NCBI nr
Match: XP_038899521.1 (uncharacterized protein LOC120086802 [Benincasa hispida])

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-27
Identity = 73/116 (62.93%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 5   SCPPLDQENGLPEYMFGDKNLEGKIDYIVKLLEAHGHSLNSIKAEVIKKSSSMETVPTPD 64
           S PP DQEN   + M  ++  EGKIDYIVKLLEAHG++L+SIK EVIK+S SMETVPTP+
Sbjct: 102 SLPPPDQENDWADLMKKERKFEGKIDYIVKLLEAHGYTLDSIKTEVIKRSISMETVPTPE 161

Query: 65  MKYKSMYIASQKKIEELAEEIQVLTQKLESTRDQFEATAKTPHQTDIAPEKTLKIL 121
           M YKSMYIASQKKIEELAEE +VLTQKLE+  DQ+EA     H      EK   ++
Sbjct: 162 MNYKSMYIASQKKIEELAEENRVLTQKLENALDQYEAYKNGNHDAFEMLEKLKDVI 217

[Close]

BLAST of Moc09g08200 vs. NCBI nr
Match: XP_011659307.1 (uncharacterized protein LOC105436161 isoform X4 [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 3.4e-27
Identity = 67/101 (66.34%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 5   SCPPLDQENGLPEYMFGDKNLEGKIDYIVKLLEAHGHSLNSIKAEVIKKSSSMETVPTPD 64
           S PPL QE   PE M  ++ LEGK+DYIV L EAHGH+L+SIK EVIK+S  +ET+PTP+
Sbjct: 103 SLPPLKQEKDSPELMVKERKLEGKLDYIVNLFEAHGHTLDSIKTEVIKRSFPLETIPTPE 162

Query: 65  MKYKSMYIASQKKIEELAEEIQVLTQKLESTRDQFEATAKT 106
           M YKSMYIASQKKIEELAEE +VLTQKLE+  D++EA   T
Sbjct: 163 MNYKSMYIASQKKIEELAEENRVLTQKLENALDRYEALCST 203

[Close]

BLAST of Moc09g08200 vs. NCBI nr
Match: KAA0064083.1 (titin-like isoform X2 [Cucumis melo var. makuwa] >TYK18498.1 titin-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 131.7 bits (330), Expect = 4.5e-27
Identity = 66/97 (68.04%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 5   SCPPLDQENGLPEYMFGDKNLEGKIDYIVKLLEAHGHSLNSIKAEVIKKSSSMETVPTPD 64
           S PPL QE   PE M  ++  EGK+DYIVKL EAHGH+L+SIK EVIK+S  MET+PTP+
Sbjct: 87  SLPPLKQEKDRPELMMKERKFEGKLDYIVKLFEAHGHTLDSIKTEVIKRSFPMETIPTPE 146

Query: 65  MKYKSMYIASQKKIEELAEEIQVLTQKLESTRDQFEA 102
           M YK+MYIASQKKIEELAEE +VLTQKLE+  D++EA
Sbjct: 147 MNYKNMYIASQKKIEELAEENRVLTQKLENALDRYEA 183

[Close]

BLAST of Moc09g08200 vs. NCBI nr
Match: XP_011659308.1 (uncharacterized protein LOC105436161 isoform X5 [Cucumis sativus] >KAE8646315.1 hypothetical protein Csa_016862 [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 7.7e-27
Identity = 66/97 (68.04%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 5   SCPPLDQENGLPEYMFGDKNLEGKIDYIVKLLEAHGHSLNSIKAEVIKKSSSMETVPTPD 64
           S PPL QE   PE M  ++ LEGK+DYIV L EAHGH+L+SIK EVIK+S  +ET+PTP+
Sbjct: 103 SLPPLKQEKDSPELMVKERKLEGKLDYIVNLFEAHGHTLDSIKTEVIKRSFPLETIPTPE 162

Query: 65  MKYKSMYIASQKKIEELAEEIQVLTQKLESTRDQFEA 102
           M YKSMYIASQKKIEELAEE +VLTQKLE+  D++EA
Sbjct: 163 MNYKSMYIASQKKIEELAEENRVLTQKLENALDRYEA 199

[Close]

BLAST of Moc09g08200 vs. ExPASy TrEMBL
Match: A0A6J1D8P3 (uncharacterized protein LOC111018403 OS=Momordica charantia OX=3673 GN=LOC111018403 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 9.1e-42
Identity = 96/119 (80.67%), Postives = 101/119 (84.87%), Query Frame = 0


Query: 2   EKMSCPPLDQENGLPEYMFGDKNLEGKIDYIVKLLEAHGHSLNSIKAEVIKKSSSMETVP 61
           ++ S PPLDQENG PEYMF DKNLEGKIDYIVKLLEAHGHSLNSIKAEVIKKSSSMETVP
Sbjct: 98  KEKSLPPLDQENGWPEYMFEDKNLEGKIDYIVKLLEAHGHSLNSIKAEVIKKSSSMETVP 157

Query: 62  TPDMKYKSMYIASQKKIEELAEEIQVLTQKLESTRDQFEATAKTPHQTDIAPEKTLKIL 121
           TPDMKYKSMYIASQKKIEELAEEIQ LTQKLESTRDQFEA        + A EK   ++
Sbjct: 158 TPDMKYKSMYIASQKKIEELAEEIQELTQKLESTRDQFEAYKMGARDVNEALEKMKDVI 216

[Close]

BLAST of Moc09g08200 vs. ExPASy TrEMBL
Match: A0A5A7V7I6 (Titin-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2032G00170 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.2e-27
Identity = 66/97 (68.04%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 5   SCPPLDQENGLPEYMFGDKNLEGKIDYIVKLLEAHGHSLNSIKAEVIKKSSSMETVPTPD 64
           S PPL QE   PE M  ++  EGK+DYIVKL EAHGH+L+SIK EVIK+S  MET+PTP+
Sbjct: 87  SLPPLKQEKDRPELMMKERKFEGKLDYIVKLFEAHGHTLDSIKTEVIKRSFPMETIPTPE 146

Query: 65  MKYKSMYIASQKKIEELAEEIQVLTQKLESTRDQFEA 102
           M YK+MYIASQKKIEELAEE +VLTQKLE+  D++EA
Sbjct: 147 MNYKNMYIASQKKIEELAEENRVLTQKLENALDRYEA 183

[Close]

BLAST of Moc09g08200 vs. ExPASy TrEMBL
Match: A0A0A0K4Z7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G389470 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 4.8e-27
Identity = 69/116 (59.48%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 5   SCPPLDQENGLPEYMFGDKNLEGKIDYIVKLLEAHGHSLNSIKAEVIKKSSSMETVPTPD 64
           S PPL QE   PE M  ++ LEGK+DYIV L EAHGH+L+SIK EVIK+S  +ET+PTP+
Sbjct: 103 SLPPLKQEKDSPELMVKERKLEGKLDYIVNLFEAHGHTLDSIKTEVIKRSFPLETIPTPE 162

Query: 65  MKYKSMYIASQKKIEELAEEIQVLTQKLESTRDQFEATAKTPHQTDIAPEKTLKIL 121
           M YKSMYIASQKKIEELAEE +VLTQKLE+  D++EA     H      EK   ++
Sbjct: 163 MNYKSMYIASQKKIEELAEENRVLTQKLENALDRYEAYKNGNHDAFEMLEKLKDVI 218

[Close]

BLAST of Moc09g08200 vs. ExPASy TrEMBL
Match: A0A1S3BQQ2 (uncharacterized protein LOC103492673 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492673 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 4.1e-26
Identity = 64/97 (65.98%), Postives = 78/97 (80.41%), Query Frame = 0


Query: 5   SCPPLDQENGLPEYMFGDKNLEGKIDYIVKLLEAHGHSLNSIKAEVIKKSSSMETVPTPD 64
           S PPL QE   PE M  ++  EGK+DYI+KL EAHG +L+SIK EVIK+S  MET+PTP+
Sbjct: 103 SLPPLKQEKDRPELMMKERKFEGKLDYILKLFEAHGQTLDSIKTEVIKRSFPMETIPTPE 162

Query: 65  MKYKSMYIASQKKIEELAEEIQVLTQKLESTRDQFEA 102
           M YK+MYIASQKKIEELAEE +VLTQKLE+  D++EA
Sbjct: 163 MNYKNMYIASQKKIEELAEENRVLTQKLENALDRYEA 199

[Close]

BLAST of Moc09g08200 vs. ExPASy TrEMBL
Match: A0A1S3BSE3 (uncharacterized protein LOC103492673 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492673 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 5.4e-26
Identity = 67/116 (57.76%), Postives = 83/116 (71.55%), Query Frame = 0


Query: 5   SCPPLDQENGLPEYMFGDKNLEGKIDYIVKLLEAHGHSLNSIKAEVIKKSSSMETVPTPD 64
           S PPL QE   PE M  ++  EGK+DYI+KL EAHG +L+SIK EVIK+S  MET+PTP+
Sbjct: 77  SLPPLKQEKDRPELMMKERKFEGKLDYILKLFEAHGQTLDSIKTEVIKRSFPMETIPTPE 136

Query: 65  MKYKSMYIASQKKIEELAEEIQVLTQKLESTRDQFEATAKTPHQTDIAPEKTLKIL 121
           M YK+MYIASQKKIEELAEE +VLTQKLE+  D++EA     H      EK   ++
Sbjct: 137 MNYKNMYIASQKKIEELAEENRVLTQKLENALDRYEAYKNGNHDAFEMLEKLKDVI 192

The following BLAST results are available for this feature:

BLAST of Moc09g08200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150152.1	1.9e-41	80.67	uncharacterized protein LOC111018403 [Momordica charantia] >XP_022150153.1 uncha...	[more]
XP_038899521.1	1.5e-27	62.93	uncharacterized protein LOC120086802 [Benincasa hispida]	[more]
XP_011659307.1	3.4e-27	66.34	uncharacterized protein LOC105436161 isoform X4 [Cucumis sativus]	[more]
KAA0064083.1	4.5e-27	68.04	titin-like isoform X2 [Cucumis melo var. makuwa] >TYK18498.1 titin-like isoform ...	[more]
XP_011659308.1	7.7e-27	68.04	uncharacterized protein LOC105436161 isoform X5 [Cucumis sativus] >KAE8646315.1 ...	[more]

BLAST of Moc09g08200 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc09g08200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D8P3	9.1e-42	80.67	uncharacterized protein LOC111018403 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A5A7V7I6	2.2e-27	68.04	Titin-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold20...	[more]
A0A0A0K4Z7	4.8e-27	59.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G389470 PE=4 SV=1	[more]
A0A1S3BQQ2	4.1e-26	65.98	uncharacterized protein LOC103492673 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BSE3	5.4e-26	57.76	uncharacterized protein LOC103492673 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Moc09g08200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 71..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..130
None	No IPR available	PANTHER	PTHR38936:SF1	TITIN-LIKE ISOFORM X2	coord: 7..105
None	No IPR available	PANTHER	PTHR38936	TITIN-LIKE ISOFORM X2	coord: 7..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g08200.1	Moc09g08200.1	mRNA