Lag0018497 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCGAGGTCTTCCTCCGCCATCCGACAAAGAATGCAACAAATGTACAGAGCCTGTTTGGTTGTAAAATTGGCAATTGGCCGACCAGCTATCTAGGCGCCCTTAATGGCAACCCGAGAAAGGACAACTTCTGGACTCCAGTTATCGAGAAAATGCAGAAAAGGTTGCACAATTGGGGATCCTCCAACATATCTAAAGGTGGAAGACACACCCTTATCCAAGCTACCCTTTCGAACCTCCTTATTTATTACCTATTCTTGTTTCTAGCCCCCAAAAAGGTTACAAAGGCCATCGAAAAAATGTACAGAGCCTTTTTATGGAGAGGAGGGATTGAGAAAAAAGGAAGTCATCTTCTAAAATGGTTTGTGGTCCCGTATTCAAACCCCAATTGAGGTAGGCGGATTGGGTATTTATGACATACACAAAAAGAACGTCTCCCTTTTGGCCAAATGGACACGAAGATTCTACAGCGACCAGAAGGCATTATGGAGGAGGTTCATTGCCACCAAATATGGAGTGGCCAAAAACCGAACAAGTTGGGAAAACACTCCATTAGTTCCTCAAAGGACTCATGGAGATCCATCTAAAAGATGCAACACCTCATTTACAACTCCATAG ATGATCGAGGTCTTCCTCCGCCATCCGACAAAGAATGCAACAAATGTACAGAGCCTGTTTGGTTGTAAAATTGGCAATTGGCCGACCAGCTATCTAGGCGCCCTTAATGGCAACCCGAGAAAGGACAACTTCTGGACTCCAGTTATCGAGAAAATGCAGAAAAGGTTGCACAATTGGGGATCCTCCAACATATCTAAAGGCGGATTGGGTATTTATGACATACACAAAAAGAACGTCTCCCTTTTGGCCAAATGGACACGAAGATTCTACAGCGACCAGAAGGCATTATGGAGGAGGTTCATTGCCACCAAATATGGAGTGGCCAAAAACCGAACAAGTTGGGAAAACACTCCATTAGTTCCTCAAAGGACTCATGGAGATCCATCTAAAAGATGCAACACCTCATTTACAACTCCATAG ATGATCGAGGTCTTCCTCCGCCATCCGACAAAGAATGCAACAAATGTACAGAGCCTGTTTGGTTGTAAAATTGGCAATTGGCCGACCAGCTATCTAGGCGCCCTTAATGGCAACCCGAGAAAGGACAACTTCTGGACTCCAGTTATCGAGAAAATGCAGAAAAGGTTGCACAATTGGGGATCCTCCAACATATCTAAAGGCGGATTGGGTATTTATGACATACACAAAAAGAACGTCTCCCTTTTGGCCAAATGGACACGAAGATTCTACAGCGACCAGAAGGCATTATGGAGGAGGTTCATTGCCACCAAATATGGAGTGGCCAAAAACCGAACAAGTTGGGAAAACACTCCATTAGTTCCTCAAAGGACTCATGGAGATCCATCTAAAAGATGCAACACCTCATTTACAACTCCATAG MIEVFLRHPTKNATNVQSLFGCKIGNWPTSYLGALNGNPRKDNFWTPVIEKMQKRLHNWGSSNISKGGLGIYDIHKKNVSLLAKWTRRFYSDQKALWRRFIATKYGVAKNRTSWENTPLVPQRTHGDPSKRCNTSFTTP Homology
BLAST of Lag0018497 vs. NCBI nr
Match: MCH85507.1 (LINE-1 reverse transcriptase like [Trifolium medium]) HSP 1 Score: 81.6 bits (200), Expect = 5.7e-12 Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = 0
BLAST of Lag0018497 vs. NCBI nr
Match: GEY28602.1 (nucleotide-binding alpha-beta plait domain-containing protein [Tanacetum cinerariifolium]) HSP 1 Score: 80.9 bits (198), Expect = 9.7e-12 Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = 0
BLAST of Lag0018497 vs. NCBI nr
Match: RVW47872.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]) HSP 1 Score: 80.1 bits (196), Expect = 1.7e-11 Identity = 39/106 (36.79%), Postives = 59/106 (55.66%), Query Frame = 0
BLAST of Lag0018497 vs. NCBI nr
Match: CAN75375.1 (hypothetical protein VITISV_029153 [Vitis vinifera]) HSP 1 Score: 79.7 bits (195), Expect = 2.2e-11 Identity = 39/106 (36.79%), Postives = 59/106 (55.66%), Query Frame = 0
BLAST of Lag0018497 vs. NCBI nr
Match: RVX22481.1 (hypothetical protein CK203_012567 [Vitis vinifera]) HSP 1 Score: 79.3 bits (194), Expect = 2.8e-11 Identity = 41/90 (45.56%), Postives = 56/90 (62.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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