Sed0008657 (gene) Chayote v1

Overview
NameSed0008657
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG09: 33986369 .. 33988423 (-)
RNA-Seq ExpressionSed0008657
SyntenySed0008657
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCAATCTATGAGATAATCACTTAGGCCCCGTTTGATAACCATTTTGTATTTCGGTTTTTGTTTATGAAATTTAAGCCTACAACAACTACCTTACTATACCTTTTTCTTTATTTGGATATCTACATCCTACCTATATTTTAATAAACAAAACCAAAATTTGTAAACAAAAAAAAGTAGCTTCCAAAAACTTGTTTATGTTTTTAAAATTTAGTTAGTATTCTCCTACTTTCTTAAGGAAAGATGGATACATTGTAGGAAGGATGTAGCATATGCTAGAAAATTTGAATAGAAATAGACTTAAATTTCATAAACAAAAAACAAAAAATAAAATGGTTATCAAACAAAACCTTAGTAATTAATTTTCTACAAATTTCTTTGATATCAAAATATTGTAAGGTCAAATGTTACGTCGTGATATTAGTCGAGGTGTGCATATCCGACTGTACACTTTGGAGTTTGTAGAAATGATTTATAAACTCCAAAAAGAAATACGTGGAAGAAGAATACCCCTAAGAAATGGTTTCCAAAAAAATTCAAAGCGCTCGTCTCTATTTTGTCACTCACTGAGCATTAGTTCTTCAAATGCCCAAATTTGGTCCCCAAACCCTAACAACGAATGTTCAATGGCGCCCAAATCGACAAAACCAGCGGGAATTTTGTGTCAAGAATGGCTTCGGAAGTTCCTTCAGAACTGCAAAACAGGTAATAATTTTACCAAATCTGAAGCATTTCAGTTCTTTGATGTTATGATTCGTGCAAATCCCACCCCTTCCATTACTGCATTCAATACTTTGCTTGGTGGTCTTGCTAGGCTTAAGCATTGTAATGAAGTTTTTCAGCTCTATTATAGAATGACCTTAGTTGGGCTTTTCCCTGATTTCTTCACACTTAATATTTTGCTTAATTGACTTTCTAATGTCGGTCGGGTTACCGAAGGTCTTGCGGCCATGGCTGTGATTTTAAGGAGAGGTTATATACCTAGTGTAGTCATTTATACGTCCCTCATTAATGGCCTGTGTAGGGAGAATAGGATTAGGGAAGCTACATGCTTGTTTATGAGAATGCAAAAGTTGGGTTGTAAGCCAAATGCGACCACGTATGAGACTTTGATCAAGGGGCTTTGTCGAACGGGGAACACGAACATTGCTCTTAAGTTGCATGAGGAAATGCTCAATGGAAGTACTGGTCAATATGACATTAGTTGTAAGCCTAATGTTATTTCTTATAGTACCATTATCGATGGACTTTGTAAAGATGGACACGAAGACAAAGCAATGGAACTGTTTGAGGAAATGAAAGCACGGGGAGTGCTTCCCGATGTGTGTTCTTATAACTCTTTGATTCATGGATTTTGTGATGGTGGAAACTGGGAGGAGGCTAAACGTCTATTCAATGAGATGGTCGATCAAGGTGTTCGACCAGATAATGTCACTTTTAATGTGATTATGGATATGCTCTGTAAGAGAGGAAAGGTTATCGAGGCTAAGGAATTGTTGGAGGTCATGATCCAGAGAGGTAATGTTCCTGATTTGGTTGTTTATAGTACATTGATGGACGGGTTCTGTTTAGTTGGTGACCTAAAGAGTGCGAAAAAGTTGTTTGTTAGTATGATAAGTAAGGGATGTGAACCTGATGTGATTAGTTACAATGTGCTAATCAATGAGTATTGCAAAAATGGGAAGGTGGAAAAGGCAATGAACCTTTACAAAGAAATGCTTCAAGTGGGAGTTAGGCCAGATGTGATGACATATAATTCCTTGTTGACAGGTCTTTTCCTGGCCGACAAGGTTGAAGATGCAAAAAAAATATTTGGTGTCATTCAAGATCTTGGTATGGCACTAAGTTCATATACGATTAGTATTTTTTTGGATGGGCTATGTAAGACTGGTTGTTTGTTAGAAGCAGTTGAACTTTTTAATGAGCTCCCACGCAACTTGAAGTTGACCATTGATATCCTTAATTGTGTTATCAATGGCCTATGTAAAGCCAAAAAACTTGAAACTGCGTGGGGGCTTTTCAACAAATTATCTCATGAAGGGCTTCTACTAG

mRNA sequence

ATGACGGGAATTTTGTGTCAAGAATGGCTTCGGAAGTTCCTTCAGAACTGCAAAACAGGTAATAATTTTACCAAATCTGAAGCATTTCATACCATTATCGATGGACTTTGTAAAGATGGACACGAAGACAAAGCAATGGAACTGTTTGAGGAAATGAAAGCACGGGGAGTGCTTCCCGATGTGTGTTCTTATAACTCTTTGATTCATGGATTTTGTGATGGTGGAAACTGGGAGGAGGCTAAACGTCTATTCAATGAGATGGTCGATCAAGGTGTTCGACCAGATAATGTCACTTTTAATGTGATTATGGATATGCTCTGTAAGAGAGGAAAGGTTATCGAGGCTAAGGAATTGTTGGAGGTCATGATCCAGAGAGGTAATGTTCCTGATTTGGTTGTTTATAGTACATTGATGGACGGGTTCTGTTTAGTTGGTGACCTAAAGAGTGCGAAAAAGTTGTTTGTTAGTATGATAAGTAAGGGATGTGAACCTGATGTGATTAGTTACAATGTGCTAATCAATGAGTATTGCAAAAATGGGAAGGTGGAAAAGGCAATGAACCTTTACAAAGAAATGCTTCAAGTGGGAGTTAGGCCAGATGTGATGACATATAATTCCTTGTTGACAGGTCTTTTCCTGGCCGACAAGCCAAAAAACTTGAAACTGCGTGGGGGCTTTTCAACAAATTATCTCATGAAGGGCTTCTACTAG

Coding sequence (CDS)

ATGACGGGAATTTTGTGTCAAGAATGGCTTCGGAAGTTCCTTCAGAACTGCAAAACAGGTAATAATTTTACCAAATCTGAAGCATTTCATACCATTATCGATGGACTTTGTAAAGATGGACACGAAGACAAAGCAATGGAACTGTTTGAGGAAATGAAAGCACGGGGAGTGCTTCCCGATGTGTGTTCTTATAACTCTTTGATTCATGGATTTTGTGATGGTGGAAACTGGGAGGAGGCTAAACGTCTATTCAATGAGATGGTCGATCAAGGTGTTCGACCAGATAATGTCACTTTTAATGTGATTATGGATATGCTCTGTAAGAGAGGAAAGGTTATCGAGGCTAAGGAATTGTTGGAGGTCATGATCCAGAGAGGTAATGTTCCTGATTTGGTTGTTTATAGTACATTGATGGACGGGTTCTGTTTAGTTGGTGACCTAAAGAGTGCGAAAAAGTTGTTTGTTAGTATGATAAGTAAGGGATGTGAACCTGATGTGATTAGTTACAATGTGCTAATCAATGAGTATTGCAAAAATGGGAAGGTGGAAAAGGCAATGAACCTTTACAAAGAAATGCTTCAAGTGGGAGTTAGGCCAGATGTGATGACATATAATTCCTTGTTGACAGGTCTTTTCCTGGCCGACAAGCCAAAAAACTTGAAACTGCGTGGGGGCTTTTCAACAAATTATCTCATGAAGGGCTTCTACTAG

Protein sequence

MTGILCQEWLRKFLQNCKTGNNFTKSEAFHTIIDGLCKDGHEDKAMELFEEMKARGVLPDVCSYNSLIHGFCDGGNWEEAKRLFNEMVDQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEVMIQRGNVPDLVVYSTLMDGFCLVGDLKSAKKLFVSMISKGCEPDVISYNVLINEYCKNGKVEKAMNLYKEMLQVGVRPDVMTYNSLLTGLFLADKPKNLKLRGGFSTNYLMKGFY
Homology
BLAST of Sed0008657 vs. NCBI nr
Match: KAG7014482.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305.8 bits (782), Expect = 3.2e-79
Identity = 146/194 (75.26%), Postives = 168/194 (86.60%), Query Frame = 0

Query: 28  AFHTIIDGLCKDGHEDKAMELFEEMKARGVLPDVCSYNSLIHGFCDGGNWEEAKRLFNEM 87
           ++ TIIDGLCKDG EDKA ELFEEMKAR +LPDV SY+SLIHGFC+GG WEEAK LFNEM
Sbjct: 260 SYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGFCNGGKWEEAKCLFNEM 319

Query: 88  VDQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEVMIQRGNVPDLVVYSTLMDGFCLVGDL 147
           VD G++P+ VTFNV+MD+LCK GKVIEA ELLEVMIQRGNVPDL  Y+TLMDGFCLV DL
Sbjct: 320 VDLGIQPNAVTFNVLMDILCKAGKVIEANELLEVMIQRGNVPDLFTYNTLMDGFCLVSDL 379

Query: 148 KSAKKLFVSMISKGCEPDVISYNVLINEYCKNGKVEKAMNLYKEMLQVGVRPDVMTYNSL 207
            SA++LF+SM SKGCEP+VISYNVLIN YCKN KVE+AM +Y EMLQVG++P V+TYN+L
Sbjct: 380 DSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYNEMLQVGIKPSVITYNAL 439

Query: 208 LTGLFLADKPKNLK 222
           LTGLF A K  + K
Sbjct: 440 LTGLFQAGKVNDAK 453

BLAST of Sed0008657 vs. NCBI nr
Match: XP_022992036.1 (pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita maxima])

HSP 1 Score: 305.8 bits (782), Expect = 3.2e-79
Identity = 146/193 (75.65%), Postives = 169/193 (87.56%), Query Frame = 0

Query: 29  FHTIIDGLCKDGHEDKAMELFEEMKARGVLPDVCSYNSLIHGFCDGGNWEEAKRLFNEMV 88
           + TIIDGLCKDG EDKA ELFEEMKAR +LPDV SY+SLIHGFC+GG WEEAK LFNEMV
Sbjct: 261 YSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGFCNGGKWEEAKCLFNEMV 320

Query: 89  DQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEVMIQRGNVPDLVVYSTLMDGFCLVGDLK 148
           D G++P+ VTFNV+MD+LCK GKVIEA +LLEVMIQRGNVPDL +Y+TLMDGFCLV DL+
Sbjct: 321 DLGIQPNAVTFNVLMDILCKAGKVIEANKLLEVMIQRGNVPDLFIYNTLMDGFCLVSDLE 380

Query: 149 SAKKLFVSMISKGCEPDVISYNVLINEYCKNGKVEKAMNLYKEMLQVGVRPDVMTYNSLL 208
           SA++LF+SM SKGCEP+VISYNVLIN YCKN KVE+AM +Y EMLQVGV+P V+TYN+LL
Sbjct: 381 SARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYNEMLQVGVKPSVITYNALL 440

Query: 209 TGLFLADKPKNLK 222
           TGLF A K  + K
Sbjct: 441 TGLFQAGKVDDAK 453

BLAST of Sed0008657 vs. NCBI nr
Match: KAG6575949.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305.8 bits (782), Expect = 3.2e-79
Identity = 146/194 (75.26%), Postives = 168/194 (86.60%), Query Frame = 0

Query: 28  AFHTIIDGLCKDGHEDKAMELFEEMKARGVLPDVCSYNSLIHGFCDGGNWEEAKRLFNEM 87
           ++ TIIDGLCKDG EDKA ELFEEMKAR +LPDV SY+SLIHGFC+GG WEEAK LFNEM
Sbjct: 260 SYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGFCNGGKWEEAKCLFNEM 319

Query: 88  VDQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEVMIQRGNVPDLVVYSTLMDGFCLVGDL 147
           VD G++P+ VTFNV+MD+LCK GKVIEA ELLEVMIQRGNVPDL  Y+TLMDGFCLV DL
Sbjct: 320 VDLGIQPNAVTFNVLMDILCKAGKVIEANELLEVMIQRGNVPDLFTYNTLMDGFCLVSDL 379

Query: 148 KSAKKLFVSMISKGCEPDVISYNVLINEYCKNGKVEKAMNLYKEMLQVGVRPDVMTYNSL 207
            SA++LF+SM SKGCEP+VISYNVLIN YCKN KVE+AM +Y EMLQVG++P V+TYN+L
Sbjct: 380 DSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYNEMLQVGIKPSVITYNAL 439

Query: 208 LTGLFLADKPKNLK 222
           LTGLF A K  + K
Sbjct: 440 LTGLFQAGKVNDAK 453

BLAST of Sed0008657 vs. NCBI nr
Match: KAG6575955.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305.8 bits (782), Expect = 3.2e-79
Identity = 146/194 (75.26%), Postives = 168/194 (86.60%), Query Frame = 0

Query: 28  AFHTIIDGLCKDGHEDKAMELFEEMKARGVLPDVCSYNSLIHGFCDGGNWEEAKRLFNEM 87
           ++ TIIDGLCKDG EDKA ELFEEMKAR +LPDV SY+SLIHGFC+GG WEEAK LFNEM
Sbjct: 260 SYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGFCNGGKWEEAKCLFNEM 319

Query: 88  VDQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEVMIQRGNVPDLVVYSTLMDGFCLVGDL 147
           VD G++P+ VTFNV+MD+LCK GKVIEA ELLEVMIQRGNVPDL  Y+TLMDGFCLV DL
Sbjct: 320 VDLGIQPNAVTFNVLMDILCKAGKVIEANELLEVMIQRGNVPDLFTYNTLMDGFCLVSDL 379

Query: 148 KSAKKLFVSMISKGCEPDVISYNVLINEYCKNGKVEKAMNLYKEMLQVGVRPDVMTYNSL 207
            SA++LF+SM SKGCEP+VISYNVLIN YCKN KVE+AM +Y EMLQVG++P V+TYN+L
Sbjct: 380 DSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYNEMLQVGIKPSVITYNAL 439

Query: 208 LTGLFLADKPKNLK 222
           LTGLF A K  + K
Sbjct: 440 LTGLFQAGKVNDAK 453

BLAST of Sed0008657 vs. NCBI nr
Match: XP_022953742.1 (putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Cucurbita moschata])

HSP 1 Score: 304.7 bits (779), Expect = 7.0e-79
Identity = 145/194 (74.74%), Postives = 168/194 (86.60%), Query Frame = 0

Query: 28  AFHTIIDGLCKDGHEDKAMELFEEMKARGVLPDVCSYNSLIHGFCDGGNWEEAKRLFNEM 87
           ++ TIIDGLCKDG EDKA ELFEEMKAR +LPDV SY+SLIHGFC+GG WEEAK LFNEM
Sbjct: 260 SYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGFCNGGKWEEAKCLFNEM 319

Query: 88  VDQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEVMIQRGNVPDLVVYSTLMDGFCLVGDL 147
           VD G++P+ VTFNV+MD+LCK GKVIEA ELLEVMIQRGNVPDL  Y+TLMDGFCLV DL
Sbjct: 320 VDLGIQPNAVTFNVLMDILCKAGKVIEANELLEVMIQRGNVPDLFTYNTLMDGFCLVSDL 379

Query: 148 KSAKKLFVSMISKGCEPDVISYNVLINEYCKNGKVEKAMNLYKEMLQVGVRPDVMTYNSL 207
            SA++LF+SM SKGCEP+VISYNVLIN YCKN KVE+AM +Y EMLQVG++P ++TYN+L
Sbjct: 380 DSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYNEMLQVGIKPSMITYNAL 439

Query: 208 LTGLFLADKPKNLK 222
           LTGLF A K  + K
Sbjct: 440 LTGLFQAGKVNDAK 453

BLAST of Sed0008657 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 6.7e-48
Identity = 89/215 (41.40%), Postives = 136/215 (63.26%), Query Frame = 0

Query: 17  CKTGNN------FTKSE---------AFHTIIDGLCKDGHEDKAMELFEEMKARGVLPDV 76
           CK+GN+      F K E          +  +ID LCKDG  D A+ LF EM+ +G+  DV
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280

Query: 77  CSYNSLIHGFCDGGNWEEAKRLFNEMVDQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEV 136
            +Y+SLI G C+ G W++  ++  EM+ + + PD VTF+ ++D+  K GK++EAKEL   
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340

Query: 137 MIQRGNVPDLVVYSTLMDGFCLVGDLKSAKKLFVSMISKGCEPDVISYNVLINEYCKNGK 196
           MI RG  PD + Y++L+DGFC    L  A ++F  M+SKGCEPD+++Y++LIN YCK  +
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400

Query: 197 VEKAMNLYKEMLQVGVRPDVMTYNSLLTGLFLADK 217
           V+  M L++E+   G+ P+ +TYN+L+ G   + K
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435

BLAST of Sed0008657 vs. ExPASy Swiss-Prot
Match: Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 183.3 bits (464), Expect = 3.1e-45
Identity = 82/186 (44.09%), Postives = 130/186 (69.89%), Query Frame = 0

Query: 29  FHTIIDGLCKDGHEDKAMELFEEMKARGVLPDVCSYNSLIHGFCDGGNWEEAKRLFNEMV 88
           ++TIIDGLCK  H D A+ LF+EM+ +G+ P+V +Y+SLI   C+ G W +A RL ++M+
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318

Query: 89  DQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEVMIQRGNVPDLVVYSTLMDGFCLVGDLK 148
           ++ + PD  TF+ ++D   K GK++EA++L + M++R   P +V YS+L++GFC+   L 
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378

Query: 149 SAKKLFVSMISKGCEPDVISYNVLINEYCKNGKVEKAMNLYKEMLQVGVRPDVMTYNSLL 208
            AK++F  M+SK C PDV++YN LI  +CK  +VE+ M +++EM Q G+  + +TYN L+
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438

Query: 209 TGLFLA 215
            GLF A
Sbjct: 439 QGLFQA 444

BLAST of Sed0008657 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 5.3e-45
Identity = 86/212 (40.57%), Postives = 135/212 (63.68%), Query Frame = 0

Query: 5   LCQEWLRKFLQNCKTGNNFTKSEAFHTIIDGLCKDGHEDKAMELFEEMKARGVLPDVCSY 64
           L  E LRK  +     N    +  +  IIDGLCKDG  D A  LF EM+ +G   D+ +Y
Sbjct: 246 LAMELLRKMEER----NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 305

Query: 65  NSLIHGFCDGGNWEEAKRLFNEMVDQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEVMIQ 124
           N+LI GFC+ G W++  +L  +M+ + + P+ VTF+V++D   K GK+ EA +LL+ M+Q
Sbjct: 306 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 365

Query: 125 RGNVPDLVVYSTLMDGFCLVGDLKSAKKLFVSMISKGCEPDVISYNVLINEYCKNGKVEK 184
           RG  P+ + Y++L+DGFC    L+ A ++   MISKGC+PD++++N+LIN YCK  +++ 
Sbjct: 366 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 425

Query: 185 AMNLYKEMLQVGVRPDVMTYNSLLTGLFLADK 217
            + L++EM   GV  + +TYN+L+ G   + K
Sbjct: 426 GLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453

BLAST of Sed0008657 vs. ExPASy Swiss-Prot
Match: Q9SXD8 (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX=3702 GN=At1g62590 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.0e-43
Identity = 80/184 (43.48%), Postives = 125/184 (67.93%), Query Frame = 0

Query: 29  FHTIIDGLCKDGHEDKAMELFEEMKARGVLPDVCSYNSLIHGFCDGGNWEEAKRLFNEMV 88
           F+TIID LCK  H D A+ LF+EM+ +G+ P+V +Y+SLI   C  G W +A +L ++M+
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322

Query: 89  DQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEVMIQRGNVPDLVVYSTLMDGFCLVGDLK 148
           ++ + P+ VTFN ++D   K GK +EA++L + MI+R   PD+  Y++L++GFC+   L 
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382

Query: 149 SAKKLFVSMISKGCEPDVISYNVLINEYCKNGKVEKAMNLYKEMLQVGVRPDVMTYNSLL 208
            AK++F  M+SK C PDV++YN LI  +CK+ +VE    L++EM   G+  D +TY +L+
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442

Query: 209 TGLF 213
            GLF
Sbjct: 443 QGLF 446

BLAST of Sed0008657 vs. ExPASy Swiss-Prot
Match: Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.0e-43
Identity = 83/194 (42.78%), Postives = 130/194 (67.01%), Query Frame = 0

Query: 29  FHTIIDGLCKDGHEDKAMELFEEMKARGVLPDVCSYNSLIHGFCDGGNWEEAKRLFNEMV 88
           ++TIIDGLCK  H D A+ LF EM  +G+ PDV +Y+SLI   C+ G W +A RL ++M+
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320

Query: 89  DQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEVMIQRGNVPDLVVYSTLMDGFCLVGDLK 148
           ++ + P+ VTF+ ++D   K GK++EA++L + MI+R   PD+  YS+L++GFC+   L 
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380

Query: 149 SAKKLFVSMISKGCEPDVISYNVLINEYCKNGKVEKAMNLYKEMLQVGVRPDVMTYNSLL 208
            AK +F  MISK C P+V++Y+ LI  +CK  +VE+ M L++EM Q G+  + +TY +L+
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440

Query: 209 TGLFLADKPKNLKL 223
            G F A    N ++
Sbjct: 441 HGFFQARDCDNAQM 454

BLAST of Sed0008657 vs. ExPASy TrEMBL
Match: A0A6J1JSG4 (pentatricopeptide repeat-containing protein At1g63330-like OS=Cucurbita maxima OX=3661 GN=LOC111488506 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.5e-79
Identity = 146/193 (75.65%), Postives = 169/193 (87.56%), Query Frame = 0

Query: 29  FHTIIDGLCKDGHEDKAMELFEEMKARGVLPDVCSYNSLIHGFCDGGNWEEAKRLFNEMV 88
           + TIIDGLCKDG EDKA ELFEEMKAR +LPDV SY+SLIHGFC+GG WEEAK LFNEMV
Sbjct: 261 YSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGFCNGGKWEEAKCLFNEMV 320

Query: 89  DQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEVMIQRGNVPDLVVYSTLMDGFCLVGDLK 148
           D G++P+ VTFNV+MD+LCK GKVIEA +LLEVMIQRGNVPDL +Y+TLMDGFCLV DL+
Sbjct: 321 DLGIQPNAVTFNVLMDILCKAGKVIEANKLLEVMIQRGNVPDLFIYNTLMDGFCLVSDLE 380

Query: 149 SAKKLFVSMISKGCEPDVISYNVLINEYCKNGKVEKAMNLYKEMLQVGVRPDVMTYNSLL 208
           SA++LF+SM SKGCEP+VISYNVLIN YCKN KVE+AM +Y EMLQVGV+P V+TYN+LL
Sbjct: 381 SARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYNEMLQVGVKPSVITYNALL 440

Query: 209 TGLFLADKPKNLK 222
           TGLF A K  + K
Sbjct: 441 TGLFQAGKVDDAK 453

BLAST of Sed0008657 vs. ExPASy TrEMBL
Match: A0A6J1GP31 (putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111456184 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 3.4e-79
Identity = 145/194 (74.74%), Postives = 168/194 (86.60%), Query Frame = 0

Query: 28  AFHTIIDGLCKDGHEDKAMELFEEMKARGVLPDVCSYNSLIHGFCDGGNWEEAKRLFNEM 87
           ++ TIIDGLCKDG EDKA ELFEEMKAR +LPDV SY+SLIHGFC+GG WEEAK LFNEM
Sbjct: 260 SYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGFCNGGKWEEAKCLFNEM 319

Query: 88  VDQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEVMIQRGNVPDLVVYSTLMDGFCLVGDL 147
           VD G++P+ VTFNV+MD+LCK GKVIEA ELLEVMIQRGNVPDL  Y+TLMDGFCLV DL
Sbjct: 320 VDLGIQPNAVTFNVLMDILCKAGKVIEANELLEVMIQRGNVPDLFTYNTLMDGFCLVSDL 379

Query: 148 KSAKKLFVSMISKGCEPDVISYNVLINEYCKNGKVEKAMNLYKEMLQVGVRPDVMTYNSL 207
            SA++LF+SM SKGCEP+VISYNVLIN YCKN KVE+AM +Y EMLQVG++P ++TYN+L
Sbjct: 380 DSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYNEMLQVGIKPSMITYNAL 439

Query: 208 LTGLFLADKPKNLK 222
           LTGLF A K  + K
Sbjct: 440 LTGLFQAGKVNDAK 453

BLAST of Sed0008657 vs. ExPASy TrEMBL
Match: A0A6J1DSW3 (pentatricopeptide repeat-containing protein At1g63330-like OS=Momordica charantia OX=3673 GN=LOC111022854 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.4e-77
Identity = 144/187 (77.01%), Postives = 164/187 (87.70%), Query Frame = 0

Query: 29  FHTIIDGLCKDGHEDKAMELFEEMKARGVLPDVCSYNSLIHGFCDGGNWEEAKRLFNEMV 88
           + TIIDGLCKDG EDKA ELFEEMKA+G+LPDV SY+SLIHGFC GG WEEAK LFNEMV
Sbjct: 263 YSTIIDGLCKDGLEDKARELFEEMKAQGMLPDVISYSSLIHGFCYGGKWEEAKSLFNEMV 322

Query: 89  DQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEVMIQRG-NVPDLVVYSTLMDGFCLVGDL 148
           D GV+P+ VTFNV+MDMLCK GKVIEAKELLE+M+Q G N PDL  Y+TLMDGFCLVGDL
Sbjct: 323 DHGVQPNVVTFNVLMDMLCKAGKVIEAKELLELMVQGGNNAPDLFTYNTLMDGFCLVGDL 382

Query: 149 KSAKKLFVSMISKGCEPDVISYNVLINEYCKNGKVEKAMNLYKEMLQVGVRPDVMTYNSL 208
            SA++LF++M +KGCEP+VISYNVLIN YCKN K+E+AM LY EMLQVG+RP V+TYNSL
Sbjct: 383 NSARELFINMPNKGCEPNVISYNVLINGYCKNWKMEEAMKLYNEMLQVGIRPSVITYNSL 442

Query: 209 LTGLFLA 215
           LTGLF A
Sbjct: 443 LTGLFQA 449

BLAST of Sed0008657 vs. ExPASy TrEMBL
Match: A0A0A0K8U1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G387760 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 6.6e-75
Identity = 147/235 (62.55%), Postives = 175/235 (74.47%), Query Frame = 0

Query: 1   MTGILCQEWLRKFLQNCKTGNNFTKSEAFHTIIDGLCKDGHEDKAMELFEEMKARGVLPD 60
           M GI  Q  L  FL+NCKT              DGLCK GHED+A E+FEEMKA+G++PD
Sbjct: 1   MRGISFQHRLSSFLRNCKT--------------DGLCKVGHEDEAKEIFEEMKAQGMIPD 60

Query: 61  VCSYNSLIHGFCDGGNWEEAKRLFNEMVDQGVRPDNVTFNVIMDMLCKRGKVIEAKELLE 120
           V SY+SL+HGFC  G  EE+KRLFNEMVDQGV+P+ V FNV++D+LCK GKVIEAK+LLE
Sbjct: 61  VISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLE 120

Query: 121 VMIQRGNVPDLVVYSTLMDGFCLVGDLKSAKKLFVSMISKGCEPDVISYNVLINEYCKNG 180
           V IQRG + DLV Y++L+DGFC +GDL SA+KLF+SM SKGCE + ISY +LIN YCK  
Sbjct: 121 VTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIW 180

Query: 181 KVEKAMNLYKEMLQVGVRPDVMTYNSLLTGLFLADKPKNLKLRGGFSTNYLMKGF 236
           KVE+AMNLY EM QVG RP+V TY++LLTGL    K   LKL G FS NY  KGF
Sbjct: 181 KVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKQAKLKLLGSFSNNYPRKGF 221

BLAST of Sed0008657 vs. ExPASy TrEMBL
Match: A0A1S4DYL6 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103492586 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 6.2e-73
Identity = 142/206 (68.93%), Postives = 168/206 (81.55%), Query Frame = 0

Query: 16  NCKTGNNFTKSEAFHTIIDGLCKDGHEDKAMELFEEMKARGVLPDVCSYNSLIHGFCDGG 75
           NCK  N F     ++ IIDGLCK G ED+A ELFEEMKA+G++P+V SY+SLIHGFC   
Sbjct: 181 NCKP-NVFN----YNIIIDGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIHGFCCAR 240

Query: 76  NWEEAKRLFNEMVDQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEVMIQRGNVPDLVVYS 135
            WEE+KRLF+EMVDQGV+PD VTF+V++D LCK GKVIEAK+L EVMIQRG VPDL +YS
Sbjct: 241 KWEESKRLFDEMVDQGVQPDKVTFSVLIDTLCKEGKVIEAKKLFEVMIQRGIVPDLFIYS 300

Query: 136 TLMDGFCLVGDLKSAKKLFVSMISKGCEPDVISYNVLINEYCKNGKVEKAMNLYKEMLQV 195
           +LM+GFC+VGDL SA++LFVSM SKGCEPDVISY VLIN YCK  KVE+AM LY EML V
Sbjct: 301 SLMEGFCMVGDLNSARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEMLLV 360

Query: 196 GVRPDVMTYNSLLTGLFLADKPKNLK 222
           G RP+V+TY +LLTGLFLA K  + K
Sbjct: 361 GKRPNVITYGALLTGLFLAGKVGDAK 381

BLAST of Sed0008657 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 192.2 bits (487), Expect = 4.7e-49
Identity = 89/215 (41.40%), Postives = 136/215 (63.26%), Query Frame = 0

Query: 17  CKTGNN------FTKSE---------AFHTIIDGLCKDGHEDKAMELFEEMKARGVLPDV 76
           CK+GN+      F K E          +  +ID LCKDG  D A+ LF EM+ +G+  DV
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280

Query: 77  CSYNSLIHGFCDGGNWEEAKRLFNEMVDQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEV 136
            +Y+SLI G C+ G W++  ++  EM+ + + PD VTF+ ++D+  K GK++EAKEL   
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340

Query: 137 MIQRGNVPDLVVYSTLMDGFCLVGDLKSAKKLFVSMISKGCEPDVISYNVLINEYCKNGK 196
           MI RG  PD + Y++L+DGFC    L  A ++F  M+SKGCEPD+++Y++LIN YCK  +
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400

Query: 197 VEKAMNLYKEMLQVGVRPDVMTYNSLLTGLFLADK 217
           V+  M L++E+   G+ P+ +TYN+L+ G   + K
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435

BLAST of Sed0008657 vs. TAIR 10
Match: AT1G62670.1 (rna processing factor 2 )

HSP 1 Score: 183.3 bits (464), Expect = 2.2e-46
Identity = 82/186 (44.09%), Postives = 130/186 (69.89%), Query Frame = 0

Query: 29  FHTIIDGLCKDGHEDKAMELFEEMKARGVLPDVCSYNSLIHGFCDGGNWEEAKRLFNEMV 88
           ++TIIDGLCK  H D A+ LF+EM+ +G+ P+V +Y+SLI   C+ G W +A RL ++M+
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318

Query: 89  DQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEVMIQRGNVPDLVVYSTLMDGFCLVGDLK 148
           ++ + PD  TF+ ++D   K GK++EA++L + M++R   P +V YS+L++GFC+   L 
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378

Query: 149 SAKKLFVSMISKGCEPDVISYNVLINEYCKNGKVEKAMNLYKEMLQVGVRPDVMTYNSLL 208
            AK++F  M+SK C PDV++YN LI  +CK  +VE+ M +++EM Q G+  + +TYN L+
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438

Query: 209 TGLFLA 215
            GLF A
Sbjct: 439 QGLFQA 444

BLAST of Sed0008657 vs. TAIR 10
Match: AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 182.6 bits (462), Expect = 3.8e-46
Identity = 86/212 (40.57%), Postives = 135/212 (63.68%), Query Frame = 0

Query: 5   LCQEWLRKFLQNCKTGNNFTKSEAFHTIIDGLCKDGHEDKAMELFEEMKARGVLPDVCSY 64
           L  E LRK  +     N    +  +  IIDGLCKDG  D A  LF EM+ +G   D+ +Y
Sbjct: 246 LAMELLRKMEER----NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 305

Query: 65  NSLIHGFCDGGNWEEAKRLFNEMVDQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEVMIQ 124
           N+LI GFC+ G W++  +L  +M+ + + P+ VTF+V++D   K GK+ EA +LL+ M+Q
Sbjct: 306 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 365

Query: 125 RGNVPDLVVYSTLMDGFCLVGDLKSAKKLFVSMISKGCEPDVISYNVLINEYCKNGKVEK 184
           RG  P+ + Y++L+DGFC    L+ A ++   MISKGC+PD++++N+LIN YCK  +++ 
Sbjct: 366 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 425

Query: 185 AMNLYKEMLQVGVRPDVMTYNSLLTGLFLADK 217
            + L++EM   GV  + +TYN+L+ G   + K
Sbjct: 426 GLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453

BLAST of Sed0008657 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 7.1e-45
Identity = 83/194 (42.78%), Postives = 130/194 (67.01%), Query Frame = 0

Query: 29  FHTIIDGLCKDGHEDKAMELFEEMKARGVLPDVCSYNSLIHGFCDGGNWEEAKRLFNEMV 88
           ++TIIDGLCK  H D A+ LF EM  +G+ PDV +Y+SLI   C+ G W +A RL ++M+
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320

Query: 89  DQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEVMIQRGNVPDLVVYSTLMDGFCLVGDLK 148
           ++ + P+ VTF+ ++D   K GK++EA++L + MI+R   PD+  YS+L++GFC+   L 
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380

Query: 149 SAKKLFVSMISKGCEPDVISYNVLINEYCKNGKVEKAMNLYKEMLQVGVRPDVMTYNSLL 208
            AK +F  MISK C P+V++Y+ LI  +CK  +VE+ M L++EM Q G+  + +TY +L+
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440

Query: 209 TGLFLADKPKNLKL 223
            G F A    N ++
Sbjct: 441 HGFFQARDCDNAQM 454

BLAST of Sed0008657 vs. TAIR 10
Match: AT1G63080.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 7.1e-45
Identity = 82/194 (42.27%), Postives = 129/194 (66.49%), Query Frame = 0

Query: 29  FHTIIDGLCKDGHEDKAMELFEEMKARGVLPDVCSYNSLIHGFCDGGNWEEAKRLFNEMV 88
           + T+ID LCK  H D A+ LF EM  +G+ PDV +Y+SLI   C+ G W +A RL ++M+
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302

Query: 89  DQGVRPDNVTFNVIMDMLCKRGKVIEAKELLEVMIQRGNVPDLVVYSTLMDGFCLVGDLK 148
           ++ + P+ VTFN ++D   K GK+IEA++L + MIQR   P++V Y++L++GFC+   L 
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362

Query: 149 SAKKLFVSMISKGCEPDVISYNVLINEYCKNGKVEKAMNLYKEMLQVGVRPDVMTYNSLL 208
            A+++F  M+SK C PDV++YN LIN +CK  KV   M L+++M + G+  + +TY +L+
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422

Query: 209 TGLFLADKPKNLKL 223
            G F A    N ++
Sbjct: 423 HGFFQASDCDNAQM 436

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7014482.13.2e-7975.26Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022992036.13.2e-7975.65pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita maxima][more]
KAG6575949.13.2e-7975.26Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
KAG6575955.13.2e-7975.26Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022953742.17.0e-7974.74putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [C... [more]
Match NameE-valueIdentityDescription
Q6NQ836.7e-4841.40Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... [more]
Q9SXD13.1e-4544.09Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... [more]
Q9LPX25.3e-4540.57Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop... [more]
Q9SXD81.0e-4343.48Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX... [more]
Q9LQ161.0e-4342.78Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1JSG41.5e-7975.65pentatricopeptide repeat-containing protein At1g63330-like OS=Cucurbita maxima O... [more]
A0A6J1GP313.4e-7974.74putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... [more]
A0A6J1DSW32.4e-7777.01pentatricopeptide repeat-containing protein At1g63330-like OS=Momordica charanti... [more]
A0A0A0K8U16.6e-7562.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G387760 PE=4 SV=1[more]
A0A1S4DYL66.2e-7368.93pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cuc... [more]
Match NameE-valueIdentityDescription
AT3G22470.14.7e-4941.40Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G62670.12.2e-4644.09rna processing factor 2 [more]
AT1G12775.13.8e-4640.57Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G62910.17.1e-4542.78Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G63080.17.1e-4542.27Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 167..201
e-value: 4.7E-11
score: 40.2
coord: 97..130
e-value: 9.7E-8
score: 29.7
coord: 63..95
e-value: 2.2E-12
score: 44.3
coord: 28..61
e-value: 3.3E-10
score: 37.5
coord: 132..166
e-value: 8.5E-10
score: 36.2
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 128..157
e-value: 7.2E-9
score: 35.2
coord: 29..53
e-value: 2.7E-8
score: 33.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 164..211
e-value: 5.8E-18
score: 64.8
coord: 59..108
e-value: 2.8E-19
score: 69.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 95..129
score: 12.123256
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 165..199
score: 14.512818
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 25..59
score: 12.517862
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 60..94
score: 14.808774
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 130..164
score: 12.397287
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 113..224
e-value: 1.8E-33
score: 118.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 21..112
e-value: 3.2E-33
score: 116.6
NoneNo IPR availablePANTHERPTHR47941PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIALcoord: 28..216
NoneNo IPR availablePANTHERPTHR47941:SF5PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIALcoord: 28..216
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 8..202

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0008657.1Sed0008657.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding