Lag0026423 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACAAACGATCAACCTAAAAGAAAGATGAACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACGAGAAGCTTCATAGTAGCATCCTGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGGTGAAGCCAAATCTCATTATCTTGACCAATCTTGCAAATGAAGGATCTGATCAAGACCATGACAAAGATAAGAGCTTTCAAATGTAAAAGCTCCTTATCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTGAGTGCAAAAAAAAAAAAAAAAAAATTCTTGAACTACGTTATGACTTGATCCCTATTCCATAAGGGTACGTAGGCAACTTAAAGAAAACTTTAAGTTCAGTCTCTATAAACAAAAAAAAAAAAAAGTTCTTTGTTGTAGTTCCTTCTCTCCAAGTTCGAGGGTCCTTACACTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTTGAGGGTTCTCAGTTGTACGACCGCTACGTTGTTCCTCCTCCAAGTGCGAAGGATCTTATGTGGTGCGCTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGTAGCTTCGCTGGAGTTCCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTACTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTTGCAGTTCTTTCTTTGCTTAGCAGTTCCCTCTCACTTTGTATTATCTTTCATTTCTTTTGTCTTCTATAACTGTTTCAACTCAATTCTTTCCCACCCTTTTTAACTTGACCTTCAAGTTCAACTAAAAAATGTGATTTCACTTGCTTAATTCTTGAGATTCTTATTGAGTTTTGTTGCCTATTATGCTTTTGATTCTATTGGTTTATTATTATTTTTATGTTATCTTATTATCTTGTACTCTTGCTCCATTCTTTTGCTCAATGTCTTTTTGTTTTTTGTTTAGATCTATGAAAGAATGGGGAAAATCTTAGGTTATGGCAACATTGGTGGAACTCAAAATCTGTAGGCATCAACTAAAAAAAGGTCATGTCACTAACTTAATTCTTATGATTTATATGAGTTTCCATTGTCGATTATACTTTTATCCATTATCTTCTGCTTGATGGTTTCATGTATTTTTGTTTTGATTCTATGAAAGAATGGGGAGAAATTTTGGTTATGACATTAATAATGAGATTAATTTTATCTTTTGCAACCGTTGATGATACCAATTTTGTGATTATGTACCGTCTTCAAATGGTTTAGTATCGTTATTGCTCGTGGAGTTCAAACTAATATATTAGTTGAGGAAATTAAAATTTTAAGCATAAGGGTATATTTCTCTTTTTCCTCTTGATTGTTGTAACAAAAAAAAATTGTAGAATGATCATTATTTGGTTTCTTTTCTATCGAATCAGAAATATATGTTAATATTACTTTTTTGTAAAGCACGTGATCTATGAGTTTTTGTTTATACTTTTATAAATGTTTCTTATACTATGGTTAGATGATAATGAGGTCATTGTTTGGACCATTGTAGCATTTATTTTGTACCTTGAAAAATGAAAAGGCAAAGGGAAAAAATATTAGAGGATTATATTCCATCTCTTTCCTTTGTAGAACTAACTTGGTTATGGTGTGAACTAAAAAAAAATCGTATGATGCTTATTTTTTGTTTTATGTTTTTGAAAACTTAGCTTGTAAATGACTTCTATATGTGTTTCTTTCTTTTCTTAACTACATTTTTTTATATATTAAATAATTATTGATAATTTATGTGAATATTAAAAGGTGGTATATGAAAATTTTACCAAATATGTATAAAAAGATAGTATATGTGCTTCTTTGTTTTTGTTTTTGTTTTCTTCTACTTTTTTTCCCTCTGTGTCGTTTCTCCTCCTCCCCGAAACTCTCTTTTTTTTTAAAAAAAAAAAAAACAGAAGAAAGGAAGAGAAAGAAGAAGAAAGGAAGAAGAGAAGAAGAGAAGAAGAAGAAAGAAGGAAAAAAAAAATTCCGGCGACCGCCGCCGCCGCTGCCGTTCACCGGCAGCCGGCGGCGGCTGGCCACCGGAGCTGAAGAAGATGGAAGGGGGAAGGAAGAAGATGGGAGGGGGAAGGAAGAAGATGGGAGGGAGAAAGAAGGTGGAGAAGAAAGAAGATAG ATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACAAACGATCAACCTAAAAGAAAGATGAACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACGAGAAGCTTCATAGTAGCATCCTGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGGTGAAGCCAAATCTCATTATCTTGACCAATCTTGCAAATGAAGGATCTGATCAAGACCATGACAAAGATAAGAGCTTTCAAATTTGTACGACCGCTACGTTGTTCCTCCTCCAAGTGCGAAGGATCTTATGTGGTGCGCTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGTAGCTTCGCTGGAGTTCCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTACTTCTCTCCAAGGTCGAAGAAGAAAGGAAGAGAAAGAAGAAGAAAGGAAGAAGAGAAGAAGAGAAGAAGAAGAAAGAAGGAAAAAAAAAATTCCGGCGACCGCCGCCGCCGCTGCCGTTCACCGGCAGCCGGCGGCGGCTGGCCACCGGAGCTGAAGAAGATGGAAGGGGGAAGGAAGAAGATGGGAGGGGGAAGGAAGAAGATGGGAGGGAGAAAGAAGGTGGAGAAGAAAGAAGATAG ATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACAAACGATCAACCTAAAAGAAAGATGAACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACGAGAAGCTTCATAGTAGCATCCTGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGGTGAAGCCAAATCTCATTATCTTGACCAATCTTGCAAATGAAGGATCTGATCAAGACCATGACAAAGATAAGAGCTTTCAAATTTGTACGACCGCTACGTTGTTCCTCCTCCAAGTGCGAAGGATCTTATGTGGTGCGCTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGTAGCTTCGCTGGAGTTCCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTACTTCTCTCCAAGGTCGAAGAAGAAAGGAAGAGAAAGAAGAAGAAAGGAAGAAGAGAAGAAGAGAAGAAGAAGAAAGAAGGAAAAAAAAAATTCCGGCGACCGCCGCCGCCGCTGCCGTTCACCGGCAGCCGGCGGCGGCTGGCCACCGGAGCTGAAGAAGATGGAAGGGGGAAGGAAGAAGATGGGAGGGGGAAGGAAGAAGATGGGAGGGAGAAAGAAGGTGGAGAAGAAAGAAGATAG MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDEKLHSSILSRMKRKFSVLINTEGSLKVKPNLIILTNLANEGSDQDHDKDKSFQICTTATLFLLQVRRILCGALLHCSLFSQVRWFSRSFAGVPSPQVRRFSRASLQLLLSKVEEERKRKKKKGRREEEKKKKEGKKKFRRPPPPLPFTGSRRRLATGAEEDGRGKEEDGRGKEEDGREKEGGEERR Homology
BLAST of Lag0026423 vs. NCBI nr
Match: KAA0041771.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 134.4 bits (337), Expect = 1.4e-27 Identity = 75/121 (61.98%), Postives = 90/121 (74.38%), Query Frame = 0
BLAST of Lag0026423 vs. NCBI nr
Match: KAA0044978.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 133.7 bits (335), Expect = 2.3e-27 Identity = 75/120 (62.50%), Postives = 90/120 (75.00%), Query Frame = 0
BLAST of Lag0026423 vs. NCBI nr
Match: TYK18884.1 (gag protease polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 132.5 bits (332), Expect = 5.2e-27 Identity = 74/120 (61.67%), Postives = 91/120 (75.83%), Query Frame = 0
BLAST of Lag0026423 vs. NCBI nr
Match: KAA0057874.1 (gag protease polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 132.1 bits (331), Expect = 6.8e-27 Identity = 74/118 (62.71%), Postives = 88/118 (74.58%), Query Frame = 0
BLAST of Lag0026423 vs. NCBI nr
Match: KAA0068201.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK21121.1 retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 132.1 bits (331), Expect = 6.8e-27 Identity = 74/120 (61.67%), Postives = 89/120 (74.17%), Query Frame = 0
BLAST of Lag0026423 vs. ExPASy TrEMBL
Match: A0A5A7TJH2 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G001260 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 6.6e-28 Identity = 75/121 (61.98%), Postives = 90/121 (74.38%), Query Frame = 0
BLAST of Lag0026423 vs. ExPASy TrEMBL
Match: A0A5A7TQ06 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002860 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.1e-27 Identity = 75/120 (62.50%), Postives = 90/120 (75.00%), Query Frame = 0
BLAST of Lag0026423 vs. ExPASy TrEMBL
Match: A0A5D3D5Q0 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00920 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 2.5e-27 Identity = 74/120 (61.67%), Postives = 91/120 (75.83%), Query Frame = 0
BLAST of Lag0026423 vs. ExPASy TrEMBL
Match: A0A5A7VRG7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G001010 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 3.3e-27 Identity = 74/120 (61.67%), Postives = 89/120 (74.17%), Query Frame = 0
BLAST of Lag0026423 vs. ExPASy TrEMBL
Match: A0A5A7URU7 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001720 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 3.3e-27 Identity = 74/118 (62.71%), Postives = 88/118 (74.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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