ClCG06G010505 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G010505
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Dimer_Tnp_hAT domain-containing protein
Location	CG_Chr06: 22445110 .. 22446850 (+)
RNA-Seq Expression	ClCG06G010505
Synteny	ClCG06G010505

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGCAATGAAATTTATATATGGTGCCATGGATGCAGCAAAAGAAGAAATTGCCAAATACCTTGGGGGAGAGGAAGCAAGCTACAAGGAGATATGGAATATTATTGATGAAAAGTGGGAGTGTCAACTACATCGACAATTACATATGACAAGGTATTTCTTGAACCCACATTTTCAATATGATGATAATTTTTCCACTCATCCAGGGATTACATTGGGCTTGTATACATGTATGGATAAGTTGATAGCGGATGAAAATGAGAGAATAAAAGTTGATCTTCAAATAGATTCATTTCAAATGAGGGAAGGATTCTTTGGGTTCCAACAAGAAATAACGTCTTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCCATGTAAGCATGGTGAAGATAATATATCATATTTTTATTTATTTTGGGTTTTCTTACTTGATGTGATATTGGGTAATGTAGTTGATTGGTGGACTCAATTTAGGGATGGAACACTAGAATTGGCAAAACTTAACATCAAAATTCTGAGTTTTATATGTTCAGCATCTGGATGTGAGCGTAATTGGAGTACATTAATCATGTTAGGAACTGTTCAATTATATTTCCTTACATGCAAACAATTTTCTAAGACTTCAAACTTTAGTGGTAAATTTATGCTTTCATGGATAGGTGCATACAAAGAAAAGGAATCGTTTGAGCACAACTAAGTTAAATAACTTAGTTTACATCATGTACAATAAAAGATTAAAAGGGTCTCGAGGATGAAGTTGATCCATTGGTGGTAGATGATGTGTAATTGGATGATGATGGATTGTTGAAAATAATAGCAGGGCTACTGTTGATTTCTTTGTTGACCAGGATGATGATTCTAAAATCAATATTTATGAGCTTGGAGAAGGAAGTAGTTCTCAAAAAAAAAAAAAAAAAAAAGAGATAAAACTAGACAACCAAATGTTAAAAGTGGAGGTATGTTACTTATTGAAAATATTTAATTTAAAAAAATTTACCAAATTTACTTAGTTAAATTTATATCATAAACAGATAAAGGAAAGAGGTCAATGACATTAGATGAAGAGGAGTGGGTAGATATTGAGAGTGACAACAAAAAAGAGGATGAAGCTATTAGATAAAGTGATGATTCTATGGAAGATCGTAATAGTGATAATGATATGTATAATGATATTGTGGATGATATTTAGATGGCATATTGCGATTTGTTTTCCTTTATTGTGATTAATTATTGAAAAAAATTTCTTTGTCATGATTAATTTTGAATATGTTATGTAATTTTTTAAGCAAAATTATAATGTTCAAATATATAAGATTTATGTTTTATGATTTAATCATGTTTTCTTAATTTAAAATGAGGCTTATGCTTCAGACAGCCTCGAGGCTTATTCCTCACCTCTTGAAGGGAAAATTCCTTAAAGGCCTCCTTAAGCTTTTTAAAACATTGATTATGGTATTAATTAATTATGGTTATTGTTTCATTGTAGGCAAGGATCACGTCAGAACTTGTGACCACTCCGCAAGAGATTGTGTTTCTGAATCGCATTGTGGAGCCACCTCGTGCACCCTTAACACCCATGGCACCACCAGTACCACCTGTTGCACCTACTGATGGTATCAGGCCTTTAACAACTCACACTCCTGAGGATGTTGATGTGAACAATGATGCAAAGAAGAAGAAGAAGTTGATTAAGCTAATTAAAGGTATTGGTTGTTGTGTTGATGTTCTTGACTAG

mRNA sequence

ATGCTTGCAATGAAATTTATATATGGTGCCATGGATGCAGCAAAAGAAGAAATTGCCAAATACCTTGGGGGAGAGGAAGCAAGCTACAAGGAGATATGGAATATTATTGATGAAAAGTGGGAGTGTCAACTACATCGACAATTACATATGACAAGGGCTACTGTTGATTTCTTTGTTGACCAGGATGATGATTCTAAAATCAATATTTATGAGCTTGGAGAAGGAAAACTTGTGACCACTCCGCAAGAGATTGTGTTTCTGAATCGCATTGTGGAGCCACCTCGTGCACCCTTAACACCCATGGCACCACCAGTACCACCTGTTGCACCTACTGATGGTATCAGGCCTTTAACAACTCACACTCCTGAGGATGTTGATGTGAACAATGATGCAAAGAAGAAGAAGAAGTTGATTAAGCTAATTAAAGGTATTGGTTGTTGTGTTGATGTTCTTGACTAG

Coding sequence (CDS)

ATGCTTGCAATGAAATTTATATATGGTGCCATGGATGCAGCAAAAGAAGAAATTGCCAAATACCTTGGGGGAGAGGAAGCAAGCTACAAGGAGATATGGAATATTATTGATGAAAAGTGGGAGTGTCAACTACATCGACAATTACATATGACAAGGGCTACTGTTGATTTCTTTGTTGACCAGGATGATGATTCTAAAATCAATATTTATGAGCTTGGAGAAGGAAAACTTGTGACCACTCCGCAAGAGATTGTGTTTCTGAATCGCATTGTGGAGCCACCTCGTGCACCCTTAACACCCATGGCACCACCAGTACCACCTGTTGCACCTACTGATGGTATCAGGCCTTTAACAACTCACACTCCTGAGGATGTTGATGTGAACAATGATGCAAAGAAGAAGAAGAAGTTGATTAAGCTAATTAAAGGTATTGGTTGTTGTGTTGATGTTCTTGACTAG

Protein sequence

MLAMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLHMTRATVDFFVDQDDDSKINIYELGEGKLVTTPQEIVFLNRIVEPPRAPLTPMAPPVPPVAPTDGIRPLTTHTPEDVDVNNDAKKKKKLIKLIKGIGCCVDVLD

Homology

[Close]

BLAST of ClCG06G010505 vs. NCBI nr
Match: XP_022159386.1 (uncharacterized protein LOC111025802 [Momordica charantia])

HSP 1 Score: 87.4 bits (215), Expect = 1.1e-13
Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 0


Query: 3   AMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH 50
           AM FIYGAMD+AKEEIAK  GGEEASYKEIWNIIDEKWE QLHR LH
Sbjct: 331 AMGFIYGAMDSAKEEIAKNXGGEEASYKEIWNIIDEKWEFQLHRHLH 377

[Close]

BLAST of ClCG06G010505 vs. NCBI nr
Match: GFP83714.1 (hypothetical protein PHJA_000514900, partial [Phtheirospermum japonicum])

HSP 1 Score: 86.7 bits (213), Expect = 1.9e-13
Identity = 39/49 (79.59%), Postives = 42/49 (85.71%), Query Frame = 0


Query: 1   MLAMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH 50
           ML M F+YGAMD AKEEIAK LGGEE SYKE+WNIIDEKWE Q+HR LH
Sbjct: 202 MLGMGFLYGAMDKAKEEIAKNLGGEEGSYKELWNIIDEKWEFQMHRHLH 250

[Close]

BLAST of ClCG06G010505 vs. NCBI nr
Match: GFP98364.1 (hypothetical protein PHJA_001980300 [Phtheirospermum japonicum])

HSP 1 Score: 82.4 bits (202), Expect = 3.7e-12
Identity = 39/63 (61.90%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 1  MLAMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLHMTRATVDFFVD 60
          M  M F+YGAMD AKEEI K LGGEE SYKE+WNIIDEKWE Q+H  LH T   ++    
Sbjct: 7  MPGMGFLYGAMDKAKEEIEKNLGGEEGSYKELWNIIDEKWEFQMHHHLHATTYFLNPHFQ 66

Query: 61 QDD 64
           DD
Sbjct: 67 YDD 69

[Close]

BLAST of ClCG06G010505 vs. NCBI nr
Match: GFQ02113.1 (hypothetical protein PHJA_002355200 [Phtheirospermum japonicum])

HSP 1 Score: 80.1 bits (196), Expect = 1.8e-11
Identity = 38/49 (77.55%), Postives = 41/49 (83.67%), Query Frame = 0


Query: 1  MLAMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH 50
          ML M F+YGAMD AKEEIAK LGGEE SYK +WNIIDEKWE Q+HR LH
Sbjct: 7  MLGMGFLYGAMDKAKEEIAKNLGGEEGSYK-LWNIIDEKWEFQMHRHLH 54

[Close]

BLAST of ClCG06G010505 vs. NCBI nr
Match: GFP83826.1 (hypothetical protein PHJA_000526100 [Phtheirospermum japonicum])

HSP 1 Score: 79.3 bits (194), Expect = 3.1e-11
Identity = 36/49 (73.47%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 1   MLAMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH 50
           M  M F+YGAMD +KEEIAK LGGEE SYKE+WNIIDEKWE Q+H  LH
Sbjct: 92  MPRMGFLYGAMDKSKEEIAKNLGGEELSYKELWNIIDEKWEFQMHLHLH 140

[Close]

BLAST of ClCG06G010505 vs. ExPASy TrEMBL
Match: A0A6J1E3R9 (uncharacterized protein LOC111025802 OS=Momordica charantia OX=3673 GN=LOC111025802 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 5.5e-14
Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 0


Query: 3   AMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH 50
           AM FIYGAMD+AKEEIAK  GGEEASYKEIWNIIDEKWE QLHR LH
Sbjct: 331 AMGFIYGAMDSAKEEIAKNXGGEEASYKEIWNIIDEKWEFQLHRHLH 377

[Close]

BLAST of ClCG06G010505 vs. ExPASy TrEMBL
Match: A0A2I0X531 (Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca009501 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.2e-10
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 3   AMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH 50
           AM FIY AMD AKE IA  LGGEEASY+EIW+I+D +WE QLHR LH
Sbjct: 67  AMSFIYNAMDEAKEMIAHNLGGEEASYREIWDIVDARWEVQLHRHLH 113

[Close]

BLAST of ClCG06G010505 vs. ExPASy TrEMBL
Match: A0A2I0X4E3 (Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca006086 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.7e-10
Identity = 35/47 (74.47%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 3   AMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH 50
           AM FIY AMD AKE IA  LGGEEASY+EIW+IID +WE QLHR LH
Sbjct: 328 AMGFIYNAMDEAKELIAHNLGGEEASYREIWDIIDARWEVQLHRHLH 374

[Close]

BLAST of ClCG06G010505 vs. ExPASy TrEMBL
Match: A0A2I0XBK8 (Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca003056 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.8e-10
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 3   AMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH 50
           AM FIY AMD AKE IA  LGGEEASY+EIW+I+D +WE QLHR LH
Sbjct: 328 AMGFIYNAMDEAKELIAHNLGGEEASYREIWDIVDARWEVQLHRHLH 374

[Close]

BLAST of ClCG06G010505 vs. ExPASy TrEMBL
Match: A0A2I0V9A2 (Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca024465 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.8e-10
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 3   AMKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH 50
           AM FIY AMD AKE IA  LGGEEASY+EIW+I+D +WE QLHR LH
Sbjct: 67  AMGFIYNAMDEAKELIAHNLGGEEASYREIWDIVDARWEVQLHRHLH 113

[Close]

BLAST of ClCG06G010505 vs. TAIR 10
Match: AT5G33406.1 (hAT dimerisation domain-containing protein / transposase-related )

HSP 1 Score: 54.7 bits (130), Expect = 7.6e-08
Identity = 29/63 (46.03%), Postives = 36/63 (57.14%), Query Frame = 0


Query: 4   MKFIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLHMT--RATVDFFVDQ 63
           M +IYGAMD AKE I K    +E +YK  + IID +W+ QLHR LH        +F   Q
Sbjct: 97  MGYIYGAMDQAKETIMKSFTYKEENYKMAFEIIDRRWDIQLHRPLHAAGYYLNPEFHYGQ 156

Query: 64  DDD 65
            DD
Sbjct: 157 PDD 159

[Close]

BLAST of ClCG06G010505 vs. TAIR 10
Match: AT3G13030.1 (hAT transposon superfamily protein )

HSP 1 Score: 45.1 bits (105), Expect = 6.0e-05
Identity = 17/44 (38.64%), Postives = 26/44 (59.09%), Query Frame = 0


Query: 6   FIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH 50
           ++Y  MD+ KE IA+    +   YK +W++ID+ W   LH  LH
Sbjct: 346 YVYDTMDSIKESIAREFNHKPQFYKPLWDVIDDVWNKHLHNPLH 389

[Close]

BLAST of ClCG06G010505 vs. TAIR 10
Match: AT3G13030.2 (hAT transposon superfamily protein )

HSP 1 Score: 45.1 bits (105), Expect = 6.0e-05
Identity = 17/44 (38.64%), Postives = 26/44 (59.09%), Query Frame = 0


Query: 6   FIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH 50
           ++Y  MD+ KE IA+    +   YK +W++ID+ W   LH  LH
Sbjct: 346 YVYDTMDSIKESIAREFNHKPQFYKPLWDVIDDVWNKHLHNPLH 389

[Close]

BLAST of ClCG06G010505 vs. TAIR 10
Match: AT3G13030.3 (hAT transposon superfamily protein )

HSP 1 Score: 45.1 bits (105), Expect = 6.0e-05
Identity = 17/44 (38.64%), Postives = 26/44 (59.09%), Query Frame = 0


Query: 6   FIYGAMDAAKEEIAKYLGGEEASYKEIWNIIDEKWECQLHRQLH 50
           ++Y  MD+ KE IA+    +   YK +W++ID+ W   LH  LH
Sbjct: 346 YVYDTMDSIKESIAREFNHKPQFYKPLWDVIDDVWNKHLHNPLH 389

The following BLAST results are available for this feature:

BLAST of ClCG06G010505 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159386.1	1.1e-13	87.23	uncharacterized protein LOC111025802 [Momordica charantia]	[more]
GFP83714.1	1.9e-13	79.59	hypothetical protein PHJA_000514900, partial [Phtheirospermum japonicum]	[more]
GFP98364.1	3.7e-12	61.90	hypothetical protein PHJA_001980300 [Phtheirospermum japonicum]	[more]
GFQ02113.1	1.8e-11	77.55	hypothetical protein PHJA_002355200 [Phtheirospermum japonicum]	[more]
GFP83826.1	3.1e-11	73.47	hypothetical protein PHJA_000526100 [Phtheirospermum japonicum]	[more]

BLAST of ClCG06G010505 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG06G010505 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E3R9	5.5e-14	87.23	uncharacterized protein LOC111025802 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A2I0X531	2.2e-10	72.34	Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca009501 PE=4...	[more]
A0A2I0X4E3	3.7e-10	74.47	Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca006086 PE=4...	[more]
A0A2I0XBK8	4.8e-10	72.34	Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca003056 PE=4...	[more]
A0A2I0V9A2	4.8e-10	72.34	Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca024465 PE=4...	[more]

BLAST of ClCG06G010505 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G33406.1	7.6e-08	46.03	hAT dimerisation domain-containing protein / transposase-related	[more]
AT3G13030.1	6.0e-05	38.64	hAT transposon superfamily protein	[more]
AT3G13030.2	6.0e-05	38.64	hAT transposon superfamily protein	[more]
AT3G13030.3	6.0e-05	38.64	hAT transposon superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32166	OSJNBA0013A04.12 PROTEIN	coord: 2..71
None	No IPR available	PANTHER	PTHR32166:SF75	HAT TRANSPOSON SUPERFAMILY PROTEIN	coord: 2..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G010505.1	ClCG06G010505.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity